mRNA_E_fasciculatus_S2_contig9018.17113.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9018.17113.1 vs.
Match: Putative (respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI) HSP 1 Score: 277 bits (709), Expect = 3.130e-79 Identity = 145/170 (85.29%), Postives = 148/170 (87.06%), Query Frame = 1
Query: 136 RRQPSAGQLQRARGYHPVSLNFGRPDIEAFITGTVRGTAVVAQWAPPVESLPXXXXXXXXXQQTTASGLRQMLTRLNTGQRISKRDLMEADLTVVDSSLTKSKKPSSVSGVTGFDMPNDSATASKGSGGCVNEKSWLVLYCGANGKVEQAVQTASEGLNVTWRKEYFSKW 645
R QPSAGQLQRARGYHPVSLNFGRPDI AFITGTVRGTAVVAQWAPPV+S P QQ TA GLRQMLTRLNTGQRISKRDLMEADLTVVDSSL KSKKPSSVSGVTGFDMPN S + GS GCV+EKSWLVLYCGANGKVEQAVQTASEGLNV WRKEYFSKW
Sbjct: 754 RGQPSAGQLQRARGYHPVSLNFGRPDIAAFITGTVRGTAVVAQWAPPVDSRPPAPSSSSPRQQPTAGGLRQMLTRLNTGQRISKRDLMEADLTVVDSSLAKSKKPSSVSGVTGFDMPN-SDIPNNGSVGCVDEKSWLVLYCGANGKVEQAVQTASEGLNVAWRKEYFSKW 922
BLAST of mRNA_E_fasciculatus_S2_contig9018.17113.1 vs.
Match: FAD-binding (FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE) HSP 1 Score: 272 bits (695), Expect = 3.730e-77 Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 1
Query: 142 QPSAGQLQRARGYHPVSLNFGRPDIEAFITGTVRGTAVVAQWAPPVESLPXXXXXXXXXQQTTASGLRQMLTRLNTGQRISKRDLMEADLTVVDSSLTKSKKPSSVSGVTGFDMPNDSATASKGSGGCVNEKSWLVLYCGANGKVEQAVQTASEGLNVTWRKEYFSKW 645
QPSAGQLQRARGYHPVSLNFGRPDI AFITGTVRGTAVVAQWAPPVES PXXXXXXXXX TA GLRQMLTRLNTGQRISKRDLMEADLTVV+ SL KSKKPSS SGV+GFDMPN S TA+ GS GCV+EKSWLVLYCGANGKVEQAVQTASEGLNVTWRKEYFSKW
Sbjct: 771 QPSAGQLQRARGYHPVSLNFGRPDIAAFITGTVRGTAVVAQWAPPVESRPXXXXXXXXXXXPTAGGLRQMLTRLNTGQRISKRDLMEADLTVVNCSLAKSKKPSSTSGVSGFDMPN-SDTANNGSVGCVDEKSWLVLYCGANGKVEQAVQTASEGLNVTWRKEYFSKW 937
BLAST of mRNA_E_fasciculatus_S2_contig9018.17113.1 vs.
Match: Putative (respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI) HSP 1 Score: 112 bits (280), Expect = 2.290e-22 Identity = 78/200 (39.00%), Postives = 102/200 (51.00%), Query Frame = 1
Query: 157 QLQRARGYHPVSLNFGRPDIEAFITGTVRGTAVVA--QWA----PPVESLPXXXXXXXXXQQTTASGLR---------------------------QMLTRLNTGQRISKRDLMEADLTVVDSSLTKSKKPSS---VSGVTGFDMPND-SATASKGSGGCVNEKSWLVLYCGANGKVEQAVQTASEGLNVTWRKEYFSKW 645
+L+R P+SLNFGRPDIE F+T T+RG++ +WA PP + + Q AS LR ++L RLNT QRISKRDLM ADL+VV + + P S + + P+ SG + ++WLVLYCGAN KVE+AV+TA + L VTWRKEYFS W
Sbjct: 452 RLRRTPFGKPISLNFGRPDIEKFLTETIRGSSSSQHEKWAATGGPPGKIVGAAAVGDSWQPQQNASKLRASPPPSTGRHAEKERDYSDTSSRDVRKKVLARLNTNQRISKRDLMSADLSVVPGKASPPRVPRSGRVTAAASDMGSPDGVGGXXXXASGAAWDARTWLVLYCGANAKVEEAVETACDDLCVTWRKEYFSAW 651
BLAST of mRNA_E_fasciculatus_S2_contig9018.17113.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC5_9PHAE) HSP 1 Score: 101 bits (251), Expect = 8.730e-20 Identity = 80/212 (37.74%), Postives = 103/212 (48.58%), Query Frame = 1
Query: 157 QLQRARGYHPVSLNFGRPDIEAFITGTVRGT------------------------AVVAQWAP------PVESLPXXXXXXXXXQQT---TASGLR-----QMLTRLNTGQRISKRDLMEADLTVVDSSLTKSKKPSSVSGVTGFDMPNDSATASKGSGGCV-----------NEKSWLVLYCGANGKVEQAVQTASEGLNVTWRKEYFSKW 645
+L+R +P+SLNFGRPDIE F+T + G+ AV W P P S P ++ T+S +R ++L RLNT QRISKRDLM ADL+VV + P S VT +D + SGG + ++WLVLYCGAN KVE+AV+TA + L VTWRKEYFS W
Sbjct: 123 RLRRTPFGNPISLNFGRPDIEKFLTEIIHGSSTSSSQLEEWAATGGPPGKIVGSAAVGDSWQPQQSSSKPRASPPPSTGRHAESEREYSETSSRVRTDVRKKVLARLNTNQRISKRDLMSADLSVVPGKASPPGVPRS-GRVTA--AASDMGSPDGVSGGXXXXXXXXXXAAWDPRTWLVLYCGANAKVEKAVETACDDLGVTWRKEYFSAW 331
BLAST of mRNA_E_fasciculatus_S2_contig9018.17113.1 vs.
Match: Putative (respiratory burst oxidase homolog protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C9_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 3.210e-15 Identity = 49/97 (50.52%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 355 TRLNTGQRISKRDLMEADLTVVDSSLTKSKKPSSVSGVTGFDMPNDSATASKGSGGCVNEKSWLVLYCGANGKVEQAVQTASEGLNVTWRKEYFSKW 645
+RL+ QRI K DLMEADL+VVDS+L K T + G+ N+ +WLVLY GAN KVEQAV AS LNV+WRKEYF+KW
Sbjct: 122 SRLDNDQRICKMDLMEADLSVVDSNLRKGSSTPETHNPTDIYL---------GASRSFNKSTWLVLYSGANAKVEQAVIAASNRLNVSWRKEYFNKW 209
BLAST of mRNA_E_fasciculatus_S2_contig9018.17113.1 vs.
Match: Putative (respiratory burst oxidase homolog protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF83_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 6.620e-8 Identity = 50/173 (28.90%), Postives = 73/173 (42.20%), Query Frame = 1
Query: 181 HPVSLNFGRPDIEAFI------------------TGTVRGTAVVAQWAPPVESLPXXXXXXXXXQQTTASGLRQMLTRLNTGQRISKRDLMEADLTVVDSSLTKSKKPSSVSGVTGFDMPNDSATASKGSGGCVNEKSWLVLYCGANGKVEQAVQTASEGLNVTWRKEYFSKW 645
H V+LNFGRPDI FI +GT T + A P S T Q+ L+ Q+ S+ L+ A + V++ +S+ + + G PN + W+V+YCGAN +VE+ + + + LNVTWRKEYF W
Sbjct: 586 HDVTLNFGRPDIAKFILDALNATPSATLTAGIGLSGTGATTGIGAARTSPRSS-------GNTANAATKRMDNQVTEHLDASQKKSRTVLIRASTSTVENIKKQSRDSDNAASRKGRKAPNYKPKSFP----------WIVIYCGANARVEEVIASTCDELNVTWRKEYFGGW 741 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9018.17113.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9018.17113.1 >prot_E_fasciculatus_S2_contig9018.17113.1 ID=prot_E_fasciculatus_S2_contig9018.17113.1|Name=mRNA_E_fasciculatus_S2_contig9018.17113.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=216bp EGSALGVSSSHGGSALGGRRGRTEAAAARREQEQEERTTKTKKRHRRQPSback to top mRNA from alignment at E_fasciculatus_S2_contig9018:1571..5201+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9018.17113.1 ID=mRNA_E_fasciculatus_S2_contig9018.17113.1|Name=mRNA_E_fasciculatus_S2_contig9018.17113.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3631bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9018:1571..5201+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9018:1571..5201+ >mRNA_E_fasciculatus_S2_contig9018.17113.1 ID=mRNA_E_fasciculatus_S2_contig9018.17113.1|Name=mRNA_E_fasciculatus_S2_contig9018.17113.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=648bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9018:1571..5201+ (Ectocarpus fasciculatus EfasUO2)back to top |