mRNA_E_fasciculatus_S2_contig8989.17076.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: PPIase (cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR7_ECTSI) HSP 1 Score: 351 bits (901), Expect = 1.820e-120 Identity = 167/185 (90.27%), Postives = 177/185 (95.68%), Query Frame = 1
Query: 1 MSGLAENMLGVSNEGEGKTTRVECTTTASPEAFTLEVYHSWSPIGAERFVGLVKDDYFTDVALFRCVKNFLVQFGISPEASSPKKKFWREQGPIKDDPNLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTRGMETVVDKFYTGYGDQQPFNEDGINQGTLQSRGNAYLR 555
M+GLAENMLG+SNE EGKTTRV+CTTTASPEAFTLEVYHSWSP GAERFV LVKDDYFTDVALFRCVKNFLVQFGISP SSPKKKFWRE+GPIKDDPNL ISFKRGMLSFAG GPNSR TQVFITF+D+PHLGK+PWETPLGIVT+GM+TVVDKFYTGYGDQQPFN+DGINQGTLQSRGNAYLR
Sbjct: 1 MAGLAENMLGISNEEEGKTTRVQCTTTASPEAFTLEVYHSWSPNGAERFVDLVKDDYFTDVALFRCVKNFLVQFGISPYVSSPKKKFWREKGPIKDDPNLQISFKRGMLSFAGSGPNSRGTQVFITFADIPHLGKTPWETPLGIVTQGMDTVVDKFYTGYGDQQPFNQDGINQGTLQSRGNAYLR 185
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFS0_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.590e-54 Identity = 90/165 (54.55%), Postives = 112/165 (67.88%), Query Frame = 1
Query: 61 RVECTTTASPEAFTLEVYHSWSPIGAERFVGLVKDDYFTDVALFRCVKNFLVQFGISPEASSPKKKFWREQGPIKDDPNLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTRGMETVVDKFYTGYGDQQPFNEDGINQGTLQSRGNAYLR 555
RV C+TT P +E+Y WSP+GAERF+ LVKDD+FTD+A FRCV+ FL QFGIS P KK W + I DDPNL + K+ LSFAGGGPN+R+TQ+FI F D+ LGK PWETP G V G +T+ D Y YGD PF + G +Q + +RGNAY+R
Sbjct: 22 RVACSTTKGP--LLIEIYKEWSPLGAERFLDLVKDDFFTDIAFFRCVRRFLTQFGIS---DVPSKKHWHRE-EIPDDPNLNLGIKKNYLSFAGGGPNTRSTQLFIAFEDLDFLGKEPWETPFGQVIEGQQTL-DSLYKDYGDIPPFGK-GPDQQKIHNRGNAYVR 178
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: Hypothetical (protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0Y9_9CHLO) HSP 1 Score: 168 bits (425), Expect = 2.500e-48 Identity = 84/168 (50.00%), Postives = 114/168 (67.86%), Query Frame = 1
Query: 52 KTTRVECTTTASPEAFTLEVYHSWSPIGAERFVGLVKDDYFTDVALFRCVKNFLVQFGISPEASSPKKKFWREQGPIKDDPNLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTRGMETVVDKFYTGYGDQQPFNEDGINQGTLQSRGNAYLR 555
+T +V C TTA T+EV+ W+P+GA RF+ LV+ +F DVALFR V NFLVQFGI+ + KK W+ +G I DDP++G KRG ++FAG G NSRTTQ++I F D HLGK+ WETP VT GM+ VVD+FY+GYGD + F + G + + GN+Y++
Sbjct: 27 ETKQVACETTAGK--LTIEVHPEWAPLGAARFLELVESGFFVDVALFRVVPNFLVQFGIAADPEVTKK--WQSKGNIMDDPSIGTPVKRGTIAFAGSGQNSRTTQMWIAFQDSAHLGKAFWETPFAQVTEGMD-VVDRFYSGYGDMEAFGGHCPDSGKMSTLGNSYVK 189
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: PPIase (cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT8_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.290e-48 Identity = 83/168 (49.40%), Postives = 106/168 (63.10%), Query Frame = 1
Query: 58 TRVECTTTASPEAFTLEVYHSWSPIGAERFVGLVKDDYFTDVALFRCVKNFLVQFGISPEASSPKKKFWREQGP-IKDD-PNLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTRGMETVVDKFYTGYGDQQPFNEDGINQGTLQSRGNAYLR 555
T +EC TTA+P F +EV H W+P+GA+RFV ++ TD+ALFR K+F+VQ G+ + W E P DD P+ + FK GM+SFAGGG +SR T FI ++D LG SPWETP G+V GM VV FY GYG+ QPFN G+NQ + GNAYLR
Sbjct: 29 TTIECMTTAAPMPFAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLR 196
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7D7_ALECA) HSP 1 Score: 163 bits (412), Expect = 1.090e-47 Identity = 85/164 (51.83%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 64 VECTTTASPEAFTLEVYHSWSPIGAERFVGLVKDDYFTDVALFRCVKNFLVQFGISPEASSPKKKFWREQGPIKDDPNLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTRGMETVVDKFYTGYGDQQPFNEDGINQGTLQSRGNAYLR 555
V C TT LEVY WSP GAE F+ LVK ++TD+ALFR V NFLVQFGIS +++ +K + Q I+DDP+LG+ F+RG LS+AGGGPNSRT QVFI+F LGKSPWETP G V++ ++ + YTGYGD P+ + G + +Q GN Y+R
Sbjct: 17 VSCDTTKGQ--LDLEVYREWSPNGAEHFLDLVKAGWYTDIALFRAVPNFLVQFGISTDSAMTQK--YGSQ-TIEDDPSLGLPFERGTLSYAGGGPNSRTNQVFISFGQNRGLGKSPWETPFGHVSKHSMDILSQIYTGYGDMPPWGK-GPSPSLIQQHGNKYVR 174
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CPH7_NANGC) HSP 1 Score: 160 bits (406), Expect = 1.550e-45 Identity = 81/155 (52.26%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 58 TRVEC-TTTASPEAFTLEVYHSWSPIGAERFVGLVKDDYFTDVALFRCVKNFLVQFGISPEASSPKKKFWREQGPIKDDPNLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTRGMETVVDKFYTGYGDQQPFNEDGINQ 519
T V+C TT A+ AF E+ W+P GAERF+ LV YFTDV FR V FL QFGI P ++ K+ WRE+G I DDP+ RG LSFAG GPN+R TQ+FI +D LGKSPWE P+G V GM+ V+D Y GYG+ PFN++G+ Q
Sbjct: 36 TLVKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKR--WREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMD-VIDALYAGYGEISPFNKEGVEQ 187
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: PPIase (cyclophilin-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LG42_9EUKA) HSP 1 Score: 158 bits (400), Expect = 2.350e-45 Identity = 83/161 (51.55%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 70 CTTTASPEAFTLEVYHSWSPIGAERFVGLVKDDYFTDVALFRCVKNFLVQFGISPEASSPKKKFWREQGPIKDDPNLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTRGMETVVDKFYTGYGDQQPFNEDGINQGTLQSRGNAYL 552
C TTASP+ +EVY W+PIG++RF+ LV+D+YFT FR VK FLVQFGI + S K K W ++GPI DDP G+SFKRG LSFAG G +SRTT++F+ +SD G + WE P G+V + M+ V D+ YGD P+ + G +Q L RGNAYL
Sbjct: 2 CKTTASPKEIRIEVYPDWAPIGSDRFLELVRDNYFTKSPFFRVVKGFLVQFGIPADPS--KWKEWHDKGPINDDPPKGVSFKRGYLSFAGYGEDSRTTELFVAYSDENGFGNTRWEVPFGVV-QDMD-VFDQINDEYGDVPPYGQ-GPDQQQLYLRGNAYL 157
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=3 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CX23_9EUKA) HSP 1 Score: 146 bits (369), Expect = 7.390e-41 Identity = 78/166 (46.99%), Postives = 100/166 (60.24%), Query Frame = 1
Query: 64 VECTTTASPEAFTLEVYHSWSPIGAERFVGLVKDDYFTD-VALFRCVKNFLVQFGISPEASSPKKKFWREQGPIKDDPNLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTR-GMETVVDKFYTGYGDQQPFNEDGINQGTLQSRGNAYLR 555
+ C +T P F + + +WSP GA+RF LV++ YF D V +FR VK FLVQFGIS S + W + PI DD + +FKRG +SFAG GPNSRTTQ FI + D HLG +PWETP G ++ ME VVD FY+ YGD F +QG G Y++
Sbjct: 35 IRCQSTKGP--FVINMVRAWSPRGADRFKDLVEEGYFDDGVGMFRVVKGFLVQFGISNNVS--RNAAWEVKSPIPDDTRVLSTFKRGYVSFAGSGPNSRTTQTFICYQDNNHLGNAPWETPFGWISGYDMEKVVDNFYSEYGDIPHFGGKCPDQGRYSHEGGEYVK 196
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FC51_CHRCT) HSP 1 Score: 142 bits (359), Expect = 3.020e-38 Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 1
Query: 64 VECTTTASPEA--FTLEVYHSWSPIGAERFVGLVKDDYFTDVALFRCVKNFLVQFGISPEASSPKKKFWREQGPIKDDPNLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTRGMETVVDKFYTGYGDQQPFNEDGINQGTLQS 534
+EC T+ FTLE+YH W+P G +R + L + + + FR + NFL+QFGI P+A K+++W++QG I DDP+ GI+F G++SFAG NSR+T +FIT + P LG+ PWE +G VTRGM+ VV Y+GYGD+ ++QG LQ+
Sbjct: 40 IECRTSVKHAGSNFTLELYHGWAPQGVKRVLALAEHGFLDGLPFFRALPNFLIQFGIQPDAI--KQRYWQDQGNIPDDPSKGIAFTDGVVSFAGYSRNSRSTHLFITLGNQPGLGRRPWEVAIGKVTRGMD-VVRNIYSGYGDK-------VDQGRLQA 188
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7Y9_9STRA) HSP 1 Score: 149 bits (375), Expect = 3.360e-38 Identity = 80/167 (47.90%), Postives = 115/167 (68.86%), Query Frame = 1
Query: 64 VECTTTASPEAFTLEVYHSWSPIGAERFVGLVKDDYF-TDVALFRCVKNFLVQFGISPEASSPK-KKFWREQGPIKDDP---NLGISFKRGMLSFAGGGPNSRTTQVFITFSDMPHLGKSPWETPLGIVTRGMETVVDKFYTGYGDQQPFNEDGINQGTLQSRGNAY 549
V C T+ P FT+ V+ +W+P+GAERF+ LV+D +F T +ALFR VKNF+ QFG+ A PK ++ WR +G I+DDP G F++G +SFAG G NSR+TQ+F+ ++++P LG+S WE P G V G E V +K+YTGYG+ + FN + +Q LQ++G AY
Sbjct: 150 VHCDTSKGP--FTVAVHRTWAPLGAERFLDLVRDRFFDTKIALFRAVKNFICQFGV---AGDPKVQREWRAKGTIQDDPIWLEPGKKFQKGWMSFAGSGANSRSTQMFVAYANVP-LGRSKWEVPFGRVIAGFENV-EKWYTGYGELRTFNGNAPDQVKLQNQGLAY 309 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8989.17076.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8989.17076.1 >prot_E_fasciculatus_S2_contig8989.17076.1 ID=prot_E_fasciculatus_S2_contig8989.17076.1|Name=mRNA_E_fasciculatus_S2_contig8989.17076.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=185bp MSGLAENMLGVSNEGEGKTTRVECTTTASPEAFTLEVYHSWSPIGAERFVback to top mRNA from alignment at E_fasciculatus_S2_contig8989:242..3938- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8989.17076.1 ID=mRNA_E_fasciculatus_S2_contig8989.17076.1|Name=mRNA_E_fasciculatus_S2_contig8989.17076.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3697bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8989:242..3938- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8989:242..3938- >mRNA_E_fasciculatus_S2_contig8989.17076.1 ID=mRNA_E_fasciculatus_S2_contig8989.17076.1|Name=mRNA_E_fasciculatus_S2_contig8989.17076.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=555bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8989:242..3938- (Ectocarpus fasciculatus EfasUO2)back to top |