mRNA_E_fasciculatus_S2_contig8976.17066.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: Putative: (flagellar associated protein, qilin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND8_ECTSI) HSP 1 Score: 221 bits (564), Expect = 1.220e-69 Identity = 130/141 (92.20%), Postives = 133/141 (94.33%), Query Frame = 1
Query: 16 MRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQDDXXXXXXXXXXXXXXXSSTFVDDEAEAPLTSQARTGSAGA 438
MRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQ+D XXXXXXXXXXXX TF DDEAEAPLTSQA +GS G+
Sbjct: 1 MRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQNDTGXXXXXXXXXXXX---TFADDEAEAPLTSQAVSGSLGS 138
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: Clusterin-associated (protein-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE3_9STRA) HSP 1 Score: 172 bits (437), Expect = 4.310e-48 Identity = 79/106 (74.53%), Postives = 96/106 (90.57%), Query Frame = 1
Query: 1 DFTEIMRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQD 318
+FTE+MRALGYPR +S+DNFR PNF+LVAD+LYW+VKRYDPD+ +SDNIESE DRVDFL G A+AM KAHI++NA++LY+ADGHAVKELLKLAT+LY ASR E+D
Sbjct: 8 NFTEMMRALGYPRLISVDNFRTPNFELVADILYWLVKRYDPDVPISDNIESEGDRVDFLLGAAQAMAAKAHIRMNARKLYSADGHAVKELLKLATVLYRASRAEED 113
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCX5_9STRA) HSP 1 Score: 152 bits (384), Expect = 8.190e-45 Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 1
Query: 1 DFTEIMRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQD 318
+FTEIMR+LGYPR +S++NFR PNFQLVADVLYWM+KRYDP I V++ I++E+DRV+FL A+AM KA IKLN KRLYAADG AVKELLK+A LYSASRV+ +
Sbjct: 8 NFTEIMRSLGYPRLISVENFRTPNFQLVADVLYWMIKRYDPAIHVTEEIDTEDDRVEFLCSAAQAMAAKAKIKLNTKRLYAADGRAVKELLKIAQELYSASRVQAE 113
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSM4_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.190e-44 Identity = 76/107 (71.03%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 1 DFTEIMRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQDD 321
DFTEIMR LGY R +S++NFR PNF+LVADVLYWMVKRYDP I + D+IESE DRV+FLT +A M +KA I LNAKRLYAADGHAVKELLKLAT+L+ A+R + D
Sbjct: 86 DFTEIMRNLGYQRLISLENFRTPNFELVADVLYWMVKRYDPAIGIPDSIESEEDRVEFLTVIAHQMYSKAQITLNAKRLYAADGHAVKELLKLATMLHKAARTQVQD 192
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HTN9_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.010e-44 Identity = 74/103 (71.84%), Postives = 92/103 (89.32%), Query Frame = 1
Query: 1 DFTEIMRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRV 309
+FTE+MRALGYPR +S+DNFR PNF+LVADVLYWMVKRYDP ++SD I++E+DRV+FLT +A+AM KA +KLNAKRLYAADG AVKELLK++T+LY ASR+
Sbjct: 8 NFTEMMRALGYPRLISVDNFRTPNFELVADVLYWMVKRYDPGTSLSDVIDTEDDRVEFLTSIAQAMAVKAKVKLNAKRLYAADGRAVKELLKISTMLYDASRI 110
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD03_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.870e-41 Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 1
Query: 1 DFTEIMRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQD 318
+FTEIMR+LGYPR +S++NFR PNFQLVADVLYWM+KRYDP I V++ I++E+DRV+FL A+AM KA IKLN KRLYAADG AVKELLK+A LYSASRV+ +
Sbjct: 8 NFTEIMRSLGYPRLISVENFRTPNFQLVADVLYWMIKRYDPAIHVTEEIDTEDDRVEFLCSAAQAMAAKAKIKLNTKRLYAADGRAVKELLKIAQELYSASRVQAE 113
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCH5_AURAN) HSP 1 Score: 149 bits (376), Expect = 3.920e-41 Identity = 73/105 (69.52%), Postives = 88/105 (83.81%), Query Frame = 1
Query: 4 FTEIMRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQD 318
F E+MRALGY R VS++NFR PNF+LVA LYWMVKRYDP+I VSD IE E+DRVDFLT A+A+ +KA IKLN KRLYAADG AVKELLK+AT+LY+AS+ ++
Sbjct: 9 FAEMMRALGYQRLVSVENFRKPNFELVASALYWMVKRYDPEINVSDCIEKEDDRVDFLTVTAQALASKAKIKLNTKRLYAADGRAVKELLKVATMLYNASKANEE 113
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A080_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.590e-39 Identity = 71/105 (67.62%), Postives = 86/105 (81.90%), Query Frame = 1
Query: 1 DFTEIMRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQ 315
+F E+MRALGY R VS++NFR+PNF LVA LYWMV+RYDPDI +SDNIE+E RV FLT AEA+LNKA+IKLN K LY ADGHAV+ELLK+A LY+AS ++
Sbjct: 8 NFAEMMRALGYQRLVSVENFRSPNFPLVASTLYWMVQRYDPDIVMSDNIETEEARVHFLTKTAEALLNKANIKLNTKNLYMADGHAVRELLKVAKTLYAASEAQE 112
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZQ5_GLOUD) HSP 1 Score: 142 bits (357), Expect = 6.910e-39 Identity = 65/104 (62.50%), Postives = 88/104 (84.62%), Query Frame = 1
Query: 1 DFTEIMRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVE 312
+ TE+MRALGYPR +S++NFR PNF+LV+D+LYWMVK+YDP +V++ I++E DR++FLT VA +L KA I+LN K+LYAADG AVKEL+KLA +LY ASR++
Sbjct: 8 NLTEMMRALGYPRPISVENFRKPNFELVSDMLYWMVKKYDPSSSVTEEIDTEEDRIEFLTQVASEVLAKARIRLNPKKLYAADGFAVKELIKLARVLYKASRID 111
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Match: clusterin-associated (protein 1 homolog n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NE88_9TELE) HSP 1 Score: 137 bits (346), Expect = 8.850e-39 Identity = 61/105 (58.10%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 1 DFTEIMRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQ 315
+FTE+MRALGYPR +SM+NFR+PNF LVA++L W+VKRY+P + + ++++E+DR+ F+ VA+ M KAHIKLN KRLY ADG+AVKE+LK+ ++LYSA + +Q
Sbjct: 8 NFTEMMRALGYPRLISMENFRSPNFTLVAEILIWLVKRYEPQMDIPTDVDTESDRIFFIKAVAQFMATKAHIKLNTKRLYQADGYAVKEMLKITSVLYSAMKTKQ 112 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8976.17066.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8976.17066.1 >prot_E_fasciculatus_S2_contig8976.17066.1 ID=prot_E_fasciculatus_S2_contig8976.17066.1|Name=mRNA_E_fasciculatus_S2_contig8976.17066.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=157bp MRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRback to top mRNA from alignment at E_fasciculatus_S2_contig8976:2046..3633+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8976.17066.1 ID=mRNA_E_fasciculatus_S2_contig8976.17066.1|Name=mRNA_E_fasciculatus_S2_contig8976.17066.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1588bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8976:2046..3633+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8976:2046..3633+ >mRNA_E_fasciculatus_S2_contig8976.17066.1 ID=mRNA_E_fasciculatus_S2_contig8976.17066.1|Name=mRNA_E_fasciculatus_S2_contig8976.17066.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=471bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8976:2046..3633+ (Ectocarpus fasciculatus EfasUO2)back to top |