mRNA_E_fasciculatus_S2_contig8964.17055.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8964.17055.1
Unique NamemRNA_E_fasciculatus_S2_contig8964.17055.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPG3_9PHAE)

HSP 1 Score: 629 bits (1623), Expect = 4.610e-220
Identity = 316/358 (88.27%), Postives = 333/358 (93.02%), Query Frame = 1
Query:    1 EGGDSTAAGNGRIEHQWAGDSFEGGVFQEGGGAALDGESAYDTAAAYADAMRQWGEYGTGPFPNDDGIGWWANYGDDFDLIGLEEGEDFGKR-AGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAGSMGGGPAADTSSQAK 1071
            +GGDS A GNG++EHQW GDSFEGG+FQ G  +ALDGESAYDTAAAYA+AMR+WGEYGTGP PNDDGIGWWANYGDDFDLIGLEEGE FGK+ AG+VVEIQPHISAAPV LDAE+GQGKRMIV+ SYFKSKRRY+GT T AGAAEKVVAGSLACWDFEDSKWLWIHDLGET SGE+KRGAPVDASPTVGDLDGDGKLEV+VGTARGGLHVVDASSG AR+GFPL YEPIRGQVV+ADVHGDERLEMLLADSSGAVVCV HDGKECWN VLSGSTTSMLTLGDVDG+GALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPIT VDLHQR AGSM G  AAD S QAK
Sbjct:  191 QGGDSAALGNGQVEHQWTGDSFEGGIFQGGLDSALDGESAYDTAAAYAEAMRRWGEYGTGPLPNDDGIGWWANYGDDFDLIGLEEGEGFGKQQAGKVVEIQPHISAAPVLLDAEEGQGKRMIVTGSYFKSKRRYWGTGTPAGAAEKVVAGSLACWDFEDSKWLWIHDLGETISGEKKRGAPVDASPTVGDLDGDGKLEVIVGTARGGLHVVDASSGLAREGFPLTYEPIRGQVVVADVHGDERLEMLLADSSGAVVCVKHDGKECWNTVLSGSTTSMLTLGDVDGDGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITPVDLHQRSAGSMSGEAAADASIQAK 548          
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBI1_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.000e-49
Identity = 120/312 (38.46%), Postives = 167/312 (53.53%), Query Frame = 1
Query:   82 QEGGGAALDGESAYDTAAAY-ADAMRQWGEYGTGPFPNDDGIGWWANYGDDFDLIGLEEGEDFGKRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFG--TDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDL 1008
            +EG   A+DG +AY+   AY A   R  G +G G      G G  A Y     ++G       G    E V +  H+ A+PV  D        ++VSVSY+  K  Y G   +      +  VAG +ACWD E+ +W W+  L + T+ + K  A + A PTV DLDGDG+ EV+VGTA G L+V+D  SG  R  FP+ +  I+  V +ADV GD  LEM++ D  G V  V   G   W+  LSG+     T+GDVDG+G +DVV    T    + ++AL  ++G  LP YP+AL N   +S+P+ LVDL
Sbjct:  300 EEGAAGAIDG-NAYEAEYAYRAPPGRTRGGHGAGY-----GAGG-AYYAGAGGMLG-------GVNQSEYVLVDAHVLASPVLADINGDGHMEVLVSVSYYFDKAEYAGKGVEQLGFDPDLFVAGGVACWDLEEQRWTWLVHL-DLTTAKSKFQAMIYAPPTVADLDGDGRKEVIVGTALGLLYVMDGESGFVRRFFPMQFNSIQAAVSVADVAGDRDLEMIVLDMGGTVAVVNLKGDILWDAHLSGTLPFPATVGDVDGDGQVDVVVVAATEGKGSHIYALRGDTGAVLPGYPIALPNNAAVSSPVLLVDL 596          
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Predicted (protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VEQ1_NAEGR)

HSP 1 Score: 155 bits (391), Expect = 3.470e-38
Identity = 91/250 (36.40%), Postives = 138/250 (55.20%), Query Frame = 1
Query:  271 KRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRY----FGTDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDL 1008
            K   E + +  HI + PV  D ++   + +I SVSYF  +  Y    F  D      +K VAG +A +D    K  W   L  TT   +++ A +  +PTV D+DGDG L+V+VGT  G ++  + + G   DGFP++   I+GQV+  D++ D  +E+   D +  +VC    GKE W++ LSGS     T+GDVDG+G LD+V G +T      +WA+S E+G  LP++PV  +    I +P  L+DL
Sbjct:  294 KDGKEFITVDAHILSTPVIADIDNDGKEELIASVSYFYDREYYHQNMFELDVDIDM-DKYVAGGIAVYDLSTRKIKWHAHLDMTTDNVKQK-AYIYGNPTVADIDGDGSLDVIVGTGLGWIYAYN-NQGKLLDGFPVLMGEIQGQVIAEDINQDGYIEICAVDFNSNLVCFDGKGKEIWSQRLSGSAAQAPTVGDVDGDGKLDLVVGTSTGH----IWAVSGETGKVLPHFPV--KTGSSIYSPALLIDL 534          
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TK69_HEMAN)

HSP 1 Score: 149 bits (376), Expect = 8.680e-38
Identity = 92/256 (35.94%), Postives = 140/256 (54.69%), Query Frame = 1
Query:  289 VEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTDTSAGA-------AEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAGSMG 1035
            V + PH+   PV  D +      +I SVSY+  + +Y  +D S+           K VAG +A +D  D    W   L  TT     R A + +SP+V DLDGDG+ EV++ T+ G ++V+D S G  R GFP+    ++GQV +ADV+ D RLE++ +D+   +   + DGKE W + +SG ++   T+GDVDG+G +DVV   T    S  VWAL+ ++G  LP +PV       I +P  ++ ++    GS G
Sbjct:  158 VYVDPHVLCTPVIADLDSDGRDEVIFSVSYYFDREQY--SDPSSYEDLDVDVKINKYVAGGVAAYDVMDGTLKWHTHLDLTTDETMYR-AYIYSSPSVADLDGDGQKEVILATSLGFIYVLD-SRGQVRSGFPVTMAEVQGQVGVADVNDDGRLELIASDNRHNIAAFSSDGKELWERHVSGFSSQGPTIGDVDGDGVVDVVVATT----SGHVWALNGKNGDTLPGFPVKCGGP--IMSPPLIIQMNSAGTGSAG 403          
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Hypothetical (protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EHG6_HEMAN)

HSP 1 Score: 149 bits (376), Expect = 2.210e-36
Identity = 92/256 (35.94%), Postives = 140/256 (54.69%), Query Frame = 1
Query:  289 VEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTDTSAGA-------AEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAGSMG 1035
            V + PH+   PV  D +      +I SVSY+  + +Y  +D S+           K VAG +A +D  D    W   L  TT     R A + +SP+V DLDGDG+ EV++ T+ G ++V+D S G  R GFP+    ++GQV +ADV+ D RLE++ +D+   +   + DGKE W + +SG ++   T+GDVDG+G +DVV   T    S  VWAL+ ++G  LP +PV       I +P  ++ ++    GS G
Sbjct:  189 VYVDPHVLCTPVIADLDSDGRDEVIFSVSYYFDREQY--SDPSSYEDLDVDVKINKYVAGGVAAYDVMDGTLKWHTHLDLTTDETMYR-AYIYSSPSVADLDGDGQKEVILATSLGFIYVLD-SRGQVRSGFPVTMAEVQGQVGVADVNDDGRLELIASDNRHNIAAFSSDGKELWERHVSGFSSQGPTIGDVDGDGVVDVVVATT----SGHVWALNGKNGDTLPGFPVKCGGP--IMSPPLIIQMNSAGTGSAG 434          
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Uncharacterized (protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C5X7_NAEFO)

HSP 1 Score: 144 bits (362), Expect = 2.940e-34
Identity = 92/252 (36.51%), Postives = 138/252 (54.76%), Query Frame = 1
Query:  271 KRAG-EVVEIQPHISAAPVFLDAEDGQGK-RMIVSVSYFKSKRRY----FGTDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDL 1008
            K+ G E + +  H+ + PV  D  DG GK  +IVSVSYF  +  Y    F  D      +K VAG +A +D    K  W   L  TT   +++ A +  +PTV D+DGDG L+VV+GT  G ++  + S G   DGFP++   I+GQV+  DV+ D  +E+   D +  + C    GKE W++ LSGS     ++GD++G+G L++V G +T      VWA+  E+G  L  +P+  +    I +P  LVDL
Sbjct:  322 KKGGKEYITVDAHVLSTPVIADI-DGDGKDELIVSVSYFYDREYYHQNMFELDVDIDM-DKYVAGGIAVYDLSTRKIKWDVHLDMTTDTVKQK-AYIYGNPTVADVDGDGSLDVVIGTGLGWIYAYN-SHGKLLDGFPILMGEIQGQVIAEDVNNDGFIEICAVDFNSNLACFNGKGKEIWSQRLSGSAAQAPSVGDINGDGKLELVVGTSTGH----VWAVDGETGNVLKPFPI--KTGASIYSPALLVDL 563          
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 4.710e-34
Identity = 96/281 (34.16%), Postives = 132/281 (46.98%), Query Frame = 1
Query:  133 AAYADAMRQWGEYGTGPFPNDDGI-GWW-ANYGDDFDLIGLEEGEDFGKRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTD--TSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVAL 963
            A Y D    +G+  T  +  DD + G+W A YG     +    G          V +  H  A P   D +      MI++VSYF  +R+Y G          EK V G L  +DF    WLW   L + T+ E +  A + ASPTV DLDGDG LEVVV TA G ++ +DA SG  R GFP+ +  I+ QV                              E W++  SG+ T+   +GDVDG+G LDVV  VT+ +G   ++A+ A SG  L  +P+ L
Sbjct:  155 AGYDDWKAAYGDVYTSAYMGDDLMAGYWDAAYGGMPPHLRRGGGXGAANATSAYVHVDAHCLAPPTMADVDGDGSAEMIIAVSYFFDRRQYEGGRGLPEGVRPEKYVGGGLLAFDFALQDWLWTVHL-DLTTDETRHRAYIYASPTVADLDGDGHLEVVVSTAMGLVYALDAESGEVRKGFPVQFGEIQAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVWHRRTSGAMTNAAVVGDVDGDGQLDVVIAVTSPDGEGHLYAMDAASGRDLDGWPLRL 434          
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Uncharacterized (protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54XH8_DICDI)

HSP 1 Score: 141 bits (355), Expect = 2.520e-33
Identity = 89/266 (33.46%), Postives = 142/266 (53.38%), Query Frame = 1
Query:  247 LEEGEDFGKRAGEVVEIQPHISAAPVFLDAEDGQG-KRMIVSVSYFKSKRRY----FGTDTSAGA-AEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAG 1026
            L++ + F ++  E + +  HI + PV  D  DG G   ++VSVSY+    +Y    + +    G   E  VAG ++ ++    +  W   L  TT     +G  V  SPTV DL+ DGKLE+++GTA G L+V+D         +PL+ E I  Q+V  D+  D RLE+++ D+ G VVC   DG E W++ ++G T    ++GD+DG+G LDVV    T      ++A + ++G PL  YP  L+    I +P+ L++ +    G
Sbjct:  276 LQDNKWFSRKTSEYIWVDSHILSTPVIADI-DGDGINELVVSVSYYYDPEKYENPHYKSQLDDGVQVENYVAGGISVFNLATGEIKWQTHLDLTTDKTDFKGL-VYGSPTVVDLNNDGKLEIIIGTALGFLYVLDYQGVPLTGNYPLVLESIFTQIVTEDLDSDGRLELIVIDTKGNVVCFNSDGDEIWSQQVTGKTEFPPSIGDLDGDGILDVVMSTFTTG----IFAWNGKTGKPLQGYP--LKFEPSIISPLLLLETNDNNGG 533          
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Hypothetical (protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M462_9CRYP)

HSP 1 Score: 134 bits (337), Expect = 1.190e-31
Identity = 93/266 (34.96%), Postives = 133/266 (50.00%), Query Frame = 1
Query:  262 DFGKRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRY--------FGTDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAGSMG 1035
            D  + AG V  +  H+   P+  D +      ++ +VSY+  + +Y           DT  G   K V G +A +D       W   L  TT     R A + ++PTV DLD DGKLEV+VGT+ G L+V+D   G  R+ FP+    I+GQV +ADV+ D  LE++  D+   V      G E W + LSG ++   TLGDV+G+G +DVV   T       +WAL+  +G  L N+PV  R   G  AP  ++      AGS G
Sbjct:   19 DRPREAGAVY-VDAHVLCTPIVADLDRDGRDEVVFAVSYYFDRDQYSDPAAWEDLDADTRLG---KYVGGGVAVYDIASRALKWHTHLDLTTDETAFR-AYIYSAPTVADLDKDGKLEVIVGTSLGFLYVLDCD-GRTRENFPVTMAEIQGQVGVADVNDDGELELVATDTRHNVAVFDRHGTELWERHLSGFSSQGPTLGDVNGDGVVDVVVATTNGH----IWALNGRTGETLRNFPV--RAGGGFMAPPMILRTRNSGAGSAG 272          
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: protein (DEFECTIVE IN EXINE FORMATION 1 isoform X1 n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB12B16)

HSP 1 Score: 135 bits (341), Expect = 1.910e-31
Identity = 87/253 (34.39%), Postives = 139/253 (54.94%), Query Frame = 1
Query:  271 KRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTDTSA--GAAE--KVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQR 1017
            +R    V I  HI + PV  D ++     MI++VSYF  +  Y   + S   G  +  K VAG +  ++ +  +  W H L ++T   + R A + +SPTV DLDGDG +++++GT+ G  +V+D   G  R+ FPL    I+G VV AD++ D ++E++ AD++G VV  T  GKE W + +        ++GDVDG+G  DVV  V T  G+  ++ LS + G  +  YP     R  +   + LVDL+++
Sbjct:  358 ERPDNYVNIDSHILSTPVIADIDNDGVSEMIIAVSYFFDREYYDNPEHSKELGGIDIGKYVAGGIVVFNLDTKQVKWTHQLDQSTDTGKFR-AYIYSSPTVVDLDGDGNMDILIGTSYGMFYVLD-HRGKVRENFPLGMAEIQGAVVAADINDDGKIELVTADTNGNVVAWTAQGKEIWEQHIKSLVPQGPSIGDVDGDGHTDVV--VPTISGN--IYVLSGKDGSFVRPYPYRTHGR--VMNQVLLVDLNKQ 602          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized4.610e-22088.27protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Hypothetical2.000e-4938.46protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Predicted3.470e-3836.40protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID... [more]
Hypothetical8.680e-3835.94protein (Fragment) n=1 Tax=Hemiselmis andersenii T... [more]
Hypothetical2.210e-3635.94protein n=3 Tax=Hemiselmis andersenii TaxID=464988... [more]
Uncharacterized2.940e-3436.51protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C... [more]
Uncharacterized4.710e-3434.16protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized2.520e-3333.46protein n=1 Tax=Dictyostelium discoideum TaxID=446... [more]
Hypothetical1.190e-3134.96protein n=1 Tax=Cryptomonas curvata TaxID=233186 R... [more]
protein1.910e-3134.39DEFECTIVE IN EXINE FORMATION 1 isoform X1 n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8964contigE_fasciculatus_S2_contig8964:450..6330 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score655.2
Seed ortholog evalue1.7e-185
Seed eggNOG ortholog2880.D7FJ73
Model size1071
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0007275,GO:0008150,GO:0009555,GO:0009653,GO:0009987,GO:0010208,GO:0010584,GO:0010927,GO:0012505,GO:0016020,GO:0016043,GO:0022607,GO:0030198,GO:0032501,GO:0032502,GO:0032989,GO:0043062,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0046872,GO:0048229,GO:0048646,GO:0048856,GO:0048869,GO:0071840,GO:0085029
Exons8
EggNOG OGs2CMU7@1,2QRZ6@2759
Cds size1071
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8964.17055.1prot_E_fasciculatus_S2_contig8964.17055.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8964 450..6330 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842549.1750202-CDS-E_fasciculatus_S2_contig8964:449..5491696842549.1750202-CDS-E_fasciculatus_S2_contig8964:449..549Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8964 450..549 -
1696842549.1906755-CDS-E_fasciculatus_S2_contig8964:724..8841696842549.1906755-CDS-E_fasciculatus_S2_contig8964:724..884Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8964 725..884 -
1696842549.2031748-CDS-E_fasciculatus_S2_contig8964:1401..15191696842549.2031748-CDS-E_fasciculatus_S2_contig8964:1401..1519Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8964 1402..1519 -
1696842549.2123141-CDS-E_fasciculatus_S2_contig8964:2620..26691696842549.2123141-CDS-E_fasciculatus_S2_contig8964:2620..2669Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8964 2621..2669 -
1696842549.222042-CDS-E_fasciculatus_S2_contig8964:3509..36461696842549.222042-CDS-E_fasciculatus_S2_contig8964:3509..3646Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8964 3510..3646 -
1696842549.2314215-CDS-E_fasciculatus_S2_contig8964:4328..44401696842549.2314215-CDS-E_fasciculatus_S2_contig8964:4328..4440Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8964 4329..4440 -
1696842549.2419214-CDS-E_fasciculatus_S2_contig8964:5127..53061696842549.2419214-CDS-E_fasciculatus_S2_contig8964:5127..5306Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8964 5128..5306 -
1696842549.252476-CDS-E_fasciculatus_S2_contig8964:6114..63301696842549.252476-CDS-E_fasciculatus_S2_contig8964:6114..6330Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8964 6115..6330 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8964.17055.1

>prot_E_fasciculatus_S2_contig8964.17055.1 ID=prot_E_fasciculatus_S2_contig8964.17055.1|Name=mRNA_E_fasciculatus_S2_contig8964.17055.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=357bp
EGGDSTAAGNGRIEHQWAGDSFEGGVFQEGGGAALDGESAYDTAAAYADA
MRQWGEYGTGPFPNDDGIGWWANYGDDFDLIGLEEGEDFGKRAGEVVEIQ
PHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTDTSAGAAEKVVAGS
LACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVV
GTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADS
SGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGS
AEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAGSMGGGPAA
DTSSQAK
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mRNA from alignment at E_fasciculatus_S2_contig8964:450..6330-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8964.17055.1 ID=mRNA_E_fasciculatus_S2_contig8964.17055.1|Name=mRNA_E_fasciculatus_S2_contig8964.17055.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5881bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8964:450..6330- (Ectocarpus fasciculatus EfasUO2)
GAAGGCGGTGATTCCACCGCAGCAGGCAACGGCCGGATCGAGCACCAGTG GGCGGGGGATAGCTTCGAGGGAGGCGTGTTTCAGGAGGGGGGCGGCGCGG CGCTGGACGGCGAGAGTGCCTACGACACCGCGGCGGCGTACGCTGATGCT ATGCGGCAGTGGGGAGAATACGGCACGGGACCCTTTCCCAACGATGATGG CATCGGCTGGTGGGCGGTGAGTTGCAGAGAGCGAGAAACGATCTAGCTGT TTGACCCGTGGGCATAGCGTATTTGTAGTATTTTAGTATCCGGAGACAAA CATCGACTTCGTCTTTTTGAGGTCGGTGAATAGGTCAAAATAGCTTTTGA TCAGCCGAGCCGGGGGGTTGATTTTGGCGTGCGGCGCGAACACGTTGTCC TTCGGGTCCTGGCATCTTTTGCCTCGACACGGTATAATCGTAAGGGATTC AAGTAAATAGGTGACTCAAGGGTGTTTCTGTCCTGCCAGAGCTTACAATC GGGGTAGACACAGCGGTTGAGTCTCGTTTCTACGTCGGGGACAGGTCATC GACGGGCGCGTTTTCACACTACTACTGCCATTGTCATTGGTCGGTTGCTT CCGTACCGGTGTCGTGAGTGGCGACGGCCAAGCTGGCTGGTCTCGACAAC CCCTTTTCGACGCGAAATGCCAGACAAAGCGGCACCACGATGGCCACAAA AAGGTTTAGGTTGACAACGCACTGCTAGCACTCTCGTAGGCTTGACGGAT CAAGTCTGATACCAAGAACTGTATACCGTTCTCATGATTTAGCGTTCATG AATACAGAGTATTTTTTCCATGGTGCACCACGAAATTATTCCACGTACGG TCGGGAGAGCAGATCCACCAGTTGGATCATTACCGAGAGATGAATTCCCC GTTCGAATCACTCATCGTAAGCCGCTTCTGCTGCTGTTGCTGCTGTTGCT GCTGTTGCTGCTGTTGCATAACGATTTTCCTCGGGCGTTTGACCAATCTT GGCCGATGAAAATCGCGAACATAGAACTACGGAGATGACTTCGATCTAAT CGGCCTGGAGGAAGGTGAAGACTTTGGGAAGCGGGCCGGGGAAGTTGTCG AGATCCAGCCGCATATCTCCGCCGCTCCCGTGTTCTTGGATGCAGAAGAT GGCCAGGGGAAGCGGATGATCGTGTCGGTCAGCTACTTCAAGAGCAAACG GCGGTGAGGTTGCATTCTGCATGTAGCGCGGGATCTCTCTCCCTCGCTCC CCCCCTCCCTCCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCGCTCTCTCTCTCTCCCTCTCTTTGTCTCTCTCTCTC TCTCTGGCCCTTTCTGGTTTGTTTTGAGTTGTTTTCTTCGGGGAGCCTCG TCAGGACTCTTGGCTGTTGCCGGTATACCATCGCTGTAGTCAAGCCTTGT TTTTATTTTTTATCGCCCCCAAAGGTTTCTGCGGCGAGCAGTCAGGGTCG CTGGCGTGGCAAGCTGTTGACCTCTTGTCTTCGAACGGACTGGAGAAGGT CTTGCTTACATGTCTTCATGTCAACGCTGTTCCGGCATCGAAATAATTCT GGTTCAGCCGTTCCACCGAAGCTACTCATGCCTATTTTGCCGACAATGAT AAAATAATCTTCTTAACTCCAGTCCTGTTTCTCTCATCTATCGTCCCCCT TCTCTCCCCCCCGGCCTTCTTCCTAGCTTCAAGATTAGCGCCTTTCCGTA TCGAACCCCTACCGTTTGCCATTCCCCGTCCTGAACACTGACTCAAGGTT TGAGTTTCGCCAATACCCTGGTCGTTTGTGTCCTTTCCGCCGCCCGCCTC CTGTCGGCTACTACCTCCTTTCCAAACACTTTTTTCATAGATATTTCGGA ACCGATACGTCCGCCGGTGCAGCTGAAAAGGTGGTGGCCGGTTCTCTGGC GTGCTGGGATTTCGAGGACTCCAAGTGGCTGTGGATTCATGATCTCGGCG AGGTACCTGTGTTTTCCTGATTTGCTCCATCCTCCCGCCCACCCTCACCG TTCAATGTTCTTGTTTATTTCGTCCTAAATCGCGGGGGGTGTTATTGTTG TTATTGTTGTTATTGTTGTTAATGTTGTTAATGTTGTTGTTGTTGTTGTT GTTGTTGTTGTGGTTGTTGTTGTTGTTGTTGTTGTTGTCTTCACATTTAA TACTCGTTCCGATCTCTCTGCTCAGCACCTTCATCCGTACTAGTCTAACA CTTGACGCGGTCGAATCCCGTGGTCAAAGGCTAACTTACCCGAAAAAAGG CGGCGGCTACATCGCACCCCAGGGTTTGGGCCCCGAGCGCTGGTGTGTTG TAAACCTGCAACGCCGCCGTTCAGTGGAGAAGCTCGCGCAGACGTGTGTG TAGGTCGCGGATAGCCATTGTAGCGTACGACAATCAACATGTTCAACCGT TTTCTGCAATCGTGCGAGATAAGGGTGTGTCGAAACACTTTTCAAGAGCG AGAGAGATACTCTGATGAGCAGAGGCCGGGACCTAGTGCCAAGAGATAGC CAACAGTAATTCTCTGTACTCGGCAGTCCCTTTTCGTCGCCTCTCACCCT CAACCTCCCATGTCCCCATCTGACTCTCTGTACTTGAAAATCCCCTCATA GCCTCTCACCCTGAAACCCCCATGTCCTCAACAGACAACCTCGGGCGAGC AGAAAAGGGGGGCTCCCGTGGACGCATCCCCTACCGTGGGAGACCTCGAC GGGGACGGGAAGCTCGAGGTGGTGGTGGGGACAGCTCGCGGAGGGCTCCA TGTCGTGGATGCTAGCAGCGGGTGAGGGGCCAGCCCTGTCTTGACGGGAC CAGCGTTTCGCGCCGTGTACCGTGTACCGTGTACCGTGTACCGTGTACCG TGTACCGTAGGTTGCACACGTGAGATACCACACCTCCCCTCGACCGATTT TCAAGGCTCGACCAGTCCGCAGTAGAATGACGTGGTGCTGCCGAAAATGG AGGTGTTGGAACCGCGCCGTCGTGTACCGTGTACCATATACTGTGTACCG TGTGCCGTTGTACCGTGTACCGTAGATTGCATACGTGAGATACCACACCC CCTTGAACCGTCTTTCAAAGCTCGACGTGGCGGCACCAAAAATTGCGGTG TGGAAACCGCCTCGTGGAGAGCGAGCTTTCCGACACCGTATCGGTTTATT TCATTTTCTTCGTCATGGAGAAATCGCGCTTTGAGAATCGACCCAGGGTG TGTGGTATCTTTTGCAAACTGAACCTATCCTGCGTTCTGCGAAAACACGG TCGCTCGTGCATCGGTCGATAATTGGTTGTGGCTACACACTGCGCTAGTT CGAAGCAATCGTGTAAGGTGTTGTGGTGTCCTATTTACGGTAGTTTCGTG GCGAAATAGCCGTGGTCTCTACAAGGCAAGGCGTTCTGTGAACATACACC CTTTTAATTCGTTCATGAAGTGAAGTTTCGCCGGTGTATTAGCTCGGCGC TAGTCCAGTCGTAGAGACGGGGTGCGGCGTTCTTCATCGCATGCCTGCTT AGAGTAGCAGGAGTCTGATTCCTCCGCACCGCTGGAACTCCTCGTGCACT TACATTTCTATGCGTGGATGCGTGTTCTCTCGCATGGTACGGACGCGGCT CGCGGCTGCAGCTCGGCGCGGGACGGATTCCCGTTGATGTACGAACCAAT CAGAGGCCAGGTGAGCCAAGCACCCAAGGGCCCCTCCTGAGGGGAATATG ACAACACCCCTAACTCTCAAGGGCTGGGCAATCTGCCCAGATTGGCGCAT GGTAGGAATATGTACTGCCGCTTTTGACATCCTCCGTCGCGGACCGGAAC ATTTCGGGCGATTAAATCGCATTGTAATCGCATTGCAATCGCATTGCAAC AGCAGTGAGGAGGGTACCCCTCTGCAAGGTCACTCTTCGGTCCGCCGACT CACTTGCCTTTCACTCTTCCTCGCCGTTGTGCACATGTTGCTTGAAACCG TATTGCACGCTTACACTAAAAGCAAGCCGGCGGTTTGTAGCTGGGTGGCC GGCCCAGAGAGAGCACGGATAGGGCTCAGCCGTCGCCATGTTTCCAATCA GTCTCGGGAACATTTAAAGGTCTACTCACTCTTTGCTCTGGCTGATCAGG TCGCCAGCCGTAGTCACGTTGTCAATATGGGTTCTGGAGAGCAGCGATAC ACATCTAGCCCTCACAGGAAGCACAAGGTACAAGGGGCTGTCTCCCTCCC CTTCGTGACAACAACAGTTCTGGGACGCCAGCATTTTATCTGGCAGGGAC TCAGGAACGTGAGGACCCTTGTGTGTGCGGGTGATGCCCCCGGTAGTTCG GCGGCGTACACTGCGCCAAAGAGGTCCACGTTGCTGGCGCTCGGCGGTTG GCATCGCGAGACGTCAAAACTTGCAAATCTTGATATTGTGGGAAACCCGG GGATGAAGCTTGCTTGCTCCCCCGGGGACGTGTATGCCTGAACACTGACC AATGCCACCTGTCCAATGCAAGGGTGTTCCGATGTTGATACACCGTGGGA AGGTGCTTGGAGGCCCCGTGTGTTGAGTAACATACCTCCGGTTCCTTATT TTTGATTGACGAGTATTCTGAAGATCGGCATGCCAGAAAATGTGGACGCA GAACCTGATCCTGAGCAAGGTGTGCGATAAACTGCTATGACACCTAGTTC AAACAAGGACGTTCGTAGACCGCTGTGTCAACAACACTCGAGCCGTAACA GAGTGGGCTCGTTCACGTCCGTCTTTGCGATGATTGGCGGCGTGATTCCA TGTTGGTGCAGGTGGTGATTGCCGACGTCCATGGGGACGAGCGACTGGAG ATGTTGCTGGCGGATTCCTCCGGAGCCGTGGTGTGCGTCACGCACGACGG CAAAGAGTGCTGGAACAAAGTCCTTTCGGGTGCGTCGTCTCGACAAGAAT CATCGTGCCAACGATTCTTCGTTTTGTTGTTCCTGTCGGCACCGGTTGAG TCGAGAAGGTCACGCCGTACGAAAGCAGGGGAGGTCCAGCGGCTGGGGTA ACTTTAACTTTGCCCTGTCATTTCGGGGAACCGGGTCTTGTTGTTGCGCG TTCGTCTTCATGCGCATGCCCTGATGAGAGATACGCATCGCTGCAATATT GCCACGAACGCATGCGTCGTGCACGCGTGTTAGTTGATGCGCTGTTGCGT TCCTTAGCGCTCCCAAACACATCTTTTGTCGCGCGCCAGTCACCCCACAC TCATGGTTTTTCTTCTTGAAAAAGGTGTCGTTACAGCGGGGAAGCATCCT CGCCATCTCCCCCCCTATCGTTTCTCATGCCGGCGGAGCGGTATGCTTCT GAAAATCTTTAAAGCGGAGGTTTCTGTGCCCCATCATCGTTAGTTGCAGG ATCCCCGTGATACCACCGCGCCCACCACCGTACATGTATGCGGCAGGATC GACAACCTCGATGCTGACGCTGGGCGACGTGGACGGCAACGGTGCCCTGG ATGTTGTAGCTGGCGTTACGACTGCCGAGGGCTCTGCGGAAGTGTGGGCG CTGAGCGCCGAGAGCGGGCTGCCTCTGCCCAACTATCCAGTGGCGCTCCG CAACCGGTGCGTGGGTGGGTTGACTCTATGGTGGGGGGCAGGTATGAGGT TTGAGGGCCCGGAAAAACAGGGTATCTTTCTCGGTGGGTATTAACCACCG TGCTTGTTGGCACGACGAGGTCCGTTGGATTGTACTCTGATGTGCACGTT TCGGCGTTTATCTTGTTTCGTTTTTCGACAGGAAGGGCATCAGCGCCCCC ATCACGCTGGTTGATTTGCACCAAAGATTCGCCGGAAGCATGGGCGGGGG GCCCGCTGCCGACACATCCAGCCAGGCCAAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8964:450..6330-

>mRNA_E_fasciculatus_S2_contig8964.17055.1 ID=mRNA_E_fasciculatus_S2_contig8964.17055.1|Name=mRNA_E_fasciculatus_S2_contig8964.17055.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1071bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8964:450..6330- (Ectocarpus fasciculatus EfasUO2)
GAAGGCGGTGATTCCACCGCAGCAGGCAACGGCCGGATCGAGCACCAGTG
GGCGGGGGATAGCTTCGAGGGAGGCGTGTTTCAGGAGGGGGGCGGCGCGG
CGCTGGACGGCGAGAGTGCCTACGACACCGCGGCGGCGTACGCTGATGCT
ATGCGGCAGTGGGGAGAATACGGCACGGGACCCTTTCCCAACGATGATGG
CATCGGCTGGTGGGCGAACTACGGAGATGACTTCGATCTAATCGGCCTGG
AGGAAGGTGAAGACTTTGGGAAGCGGGCCGGGGAAGTTGTCGAGATCCAG
CCGCATATCTCCGCCGCTCCCGTGTTCTTGGATGCAGAAGATGGCCAGGG
GAAGCGGATGATCGTGTCGGTCAGCTACTTCAAGAGCAAACGGCGATATT
TCGGAACCGATACGTCCGCCGGTGCAGCTGAAAAGGTGGTGGCCGGTTCT
CTGGCGTGCTGGGATTTCGAGGACTCCAAGTGGCTGTGGATTCATGATCT
CGGCGAGACAACCTCGGGCGAGCAGAAAAGGGGGGCTCCCGTGGACGCAT
CCCCTACCGTGGGAGACCTCGACGGGGACGGGAAGCTCGAGGTGGTGGTG
GGGACAGCTCGCGGAGGGCTCCATGTCGTGGATGCTAGCAGCGGCTCGGC
GCGGGACGGATTCCCGTTGATGTACGAACCAATCAGAGGCCAGGTGGTGA
TTGCCGACGTCCATGGGGACGAGCGACTGGAGATGTTGCTGGCGGATTCC
TCCGGAGCCGTGGTGTGCGTCACGCACGACGGCAAAGAGTGCTGGAACAA
AGTCCTTTCGGGATCGACAACCTCGATGCTGACGCTGGGCGACGTGGACG
GCAACGGTGCCCTGGATGTTGTAGCTGGCGTTACGACTGCCGAGGGCTCT
GCGGAAGTGTGGGCGCTGAGCGCCGAGAGCGGGCTGCCTCTGCCCAACTA
TCCAGTGGCGCTCCGCAACCGGAAGGGCATCAGCGCCCCCATCACGCTGG
TTGATTTGCACCAAAGATTCGCCGGAAGCATGGGCGGGGGGCCCGCTGCC
GACACATCCAGCCAGGCCAAG
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