mRNA_E_fasciculatus_S2_contig8964.17055.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPG3_9PHAE) HSP 1 Score: 629 bits (1623), Expect = 4.610e-220 Identity = 316/358 (88.27%), Postives = 333/358 (93.02%), Query Frame = 1
Query: 1 EGGDSTAAGNGRIEHQWAGDSFEGGVFQEGGGAALDGESAYDTAAAYADAMRQWGEYGTGPFPNDDGIGWWANYGDDFDLIGLEEGEDFGKR-AGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAGSMGGGPAADTSSQAK 1071
+GGDS A GNG++EHQW GDSFEGG+FQ G +ALDGESAYDTAAAYA+AMR+WGEYGTGP PNDDGIGWWANYGDDFDLIGLEEGE FGK+ AG+VVEIQPHISAAPV LDAE+GQGKRMIV+ SYFKSKRRY+GT T AGAAEKVVAGSLACWDFEDSKWLWIHDLGET SGE+KRGAPVDASPTVGDLDGDGKLEV+VGTARGGLHVVDASSG AR+GFPL YEPIRGQVV+ADVHGDERLEMLLADSSGAVVCV HDGKECWN VLSGSTTSMLTLGDVDG+GALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPIT VDLHQR AGSM G AAD S QAK
Sbjct: 191 QGGDSAALGNGQVEHQWTGDSFEGGIFQGGLDSALDGESAYDTAAAYAEAMRRWGEYGTGPLPNDDGIGWWANYGDDFDLIGLEEGEGFGKQQAGKVVEIQPHISAAPVLLDAEEGQGKRMIVTGSYFKSKRRYWGTGTPAGAAEKVVAGSLACWDFEDSKWLWIHDLGETISGEKKRGAPVDASPTVGDLDGDGKLEVIVGTARGGLHVVDASSGLAREGFPLTYEPIRGQVVVADVHGDERLEMLLADSSGAVVCVKHDGKECWNTVLSGSTTSMLTLGDVDGDGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITPVDLHQRSAGSMSGEAAADASIQAK 548
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBI1_9STRA) HSP 1 Score: 187 bits (476), Expect = 2.000e-49 Identity = 120/312 (38.46%), Postives = 167/312 (53.53%), Query Frame = 1
Query: 82 QEGGGAALDGESAYDTAAAY-ADAMRQWGEYGTGPFPNDDGIGWWANYGDDFDLIGLEEGEDFGKRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFG--TDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDL 1008
+EG A+DG +AY+ AY A R G +G G G G A Y ++G G E V + H+ A+PV D ++VSVSY+ K Y G + + VAG +ACWD E+ +W W+ L + T+ + K A + A PTV DLDGDG+ EV+VGTA G L+V+D SG R FP+ + I+ V +ADV GD LEM++ D G V V G W+ LSG+ T+GDVDG+G +DVV T + ++AL ++G LP YP+AL N +S+P+ LVDL
Sbjct: 300 EEGAAGAIDG-NAYEAEYAYRAPPGRTRGGHGAGY-----GAGG-AYYAGAGGMLG-------GVNQSEYVLVDAHVLASPVLADINGDGHMEVLVSVSYYFDKAEYAGKGVEQLGFDPDLFVAGGVACWDLEEQRWTWLVHL-DLTTAKSKFQAMIYAPPTVADLDGDGRKEVIVGTALGLLYVMDGESGFVRRFFPMQFNSIQAAVSVADVAGDRDLEMIVLDMGGTVAVVNLKGDILWDAHLSGTLPFPATVGDVDGDGQVDVVVVAATEGKGSHIYALRGDTGAVLPGYPIALPNNAAVSSPVLLVDL 596
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Predicted (protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VEQ1_NAEGR) HSP 1 Score: 155 bits (391), Expect = 3.470e-38 Identity = 91/250 (36.40%), Postives = 138/250 (55.20%), Query Frame = 1
Query: 271 KRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRY----FGTDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDL 1008
K E + + HI + PV D ++ + +I SVSYF + Y F D +K VAG +A +D K W L TT +++ A + +PTV D+DGDG L+V+VGT G ++ + + G DGFP++ I+GQV+ D++ D +E+ D + +VC GKE W++ LSGS T+GDVDG+G LD+V G +T +WA+S E+G LP++PV + I +P L+DL
Sbjct: 294 KDGKEFITVDAHILSTPVIADIDNDGKEELIASVSYFYDREYYHQNMFELDVDIDM-DKYVAGGIAVYDLSTRKIKWHAHLDMTTDNVKQK-AYIYGNPTVADIDGDGSLDVIVGTGLGWIYAYN-NQGKLLDGFPVLMGEIQGQVIAEDINQDGYIEICAVDFNSNLVCFDGKGKEIWSQRLSGSAAQAPTVGDVDGDGKLDLVVGTSTGH----IWAVSGETGKVLPHFPV--KTGSSIYSPALLIDL 534
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TK69_HEMAN) HSP 1 Score: 149 bits (376), Expect = 8.680e-38 Identity = 92/256 (35.94%), Postives = 140/256 (54.69%), Query Frame = 1
Query: 289 VEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTDTSAGA-------AEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAGSMG 1035
V + PH+ PV D + +I SVSY+ + +Y +D S+ K VAG +A +D D W L TT R A + +SP+V DLDGDG+ EV++ T+ G ++V+D S G R GFP+ ++GQV +ADV+ D RLE++ +D+ + + DGKE W + +SG ++ T+GDVDG+G +DVV T S VWAL+ ++G LP +PV I +P ++ ++ GS G
Sbjct: 158 VYVDPHVLCTPVIADLDSDGRDEVIFSVSYYFDREQY--SDPSSYEDLDVDVKINKYVAGGVAAYDVMDGTLKWHTHLDLTTDETMYR-AYIYSSPSVADLDGDGQKEVILATSLGFIYVLD-SRGQVRSGFPVTMAEVQGQVGVADVNDDGRLELIASDNRHNIAAFSSDGKELWERHVSGFSSQGPTIGDVDGDGVVDVVVATT----SGHVWALNGKNGDTLPGFPVKCGGP--IMSPPLIIQMNSAGTGSAG 403
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Hypothetical (protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EHG6_HEMAN) HSP 1 Score: 149 bits (376), Expect = 2.210e-36 Identity = 92/256 (35.94%), Postives = 140/256 (54.69%), Query Frame = 1
Query: 289 VEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTDTSAGA-------AEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAGSMG 1035
V + PH+ PV D + +I SVSY+ + +Y +D S+ K VAG +A +D D W L TT R A + +SP+V DLDGDG+ EV++ T+ G ++V+D S G R GFP+ ++GQV +ADV+ D RLE++ +D+ + + DGKE W + +SG ++ T+GDVDG+G +DVV T S VWAL+ ++G LP +PV I +P ++ ++ GS G
Sbjct: 189 VYVDPHVLCTPVIADLDSDGRDEVIFSVSYYFDREQY--SDPSSYEDLDVDVKINKYVAGGVAAYDVMDGTLKWHTHLDLTTDETMYR-AYIYSSPSVADLDGDGQKEVILATSLGFIYVLD-SRGQVRSGFPVTMAEVQGQVGVADVNDDGRLELIASDNRHNIAAFSSDGKELWERHVSGFSSQGPTIGDVDGDGVVDVVVATT----SGHVWALNGKNGDTLPGFPVKCGGP--IMSPPLIIQMNSAGTGSAG 434
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Uncharacterized (protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C5X7_NAEFO) HSP 1 Score: 144 bits (362), Expect = 2.940e-34 Identity = 92/252 (36.51%), Postives = 138/252 (54.76%), Query Frame = 1
Query: 271 KRAG-EVVEIQPHISAAPVFLDAEDGQGK-RMIVSVSYFKSKRRY----FGTDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDL 1008
K+ G E + + H+ + PV D DG GK +IVSVSYF + Y F D +K VAG +A +D K W L TT +++ A + +PTV D+DGDG L+VV+GT G ++ + S G DGFP++ I+GQV+ DV+ D +E+ D + + C GKE W++ LSGS ++GD++G+G L++V G +T VWA+ E+G L +P+ + I +P LVDL
Sbjct: 322 KKGGKEYITVDAHVLSTPVIADI-DGDGKDELIVSVSYFYDREYYHQNMFELDVDIDM-DKYVAGGIAVYDLSTRKIKWDVHLDMTTDTVKQK-AYIYGNPTVADVDGDGSLDVVIGTGLGWIYAYN-SHGKLLDGFPILMGEIQGQVIAEDVNNDGFIEICAVDFNSNLACFNGKGKEIWSQRLSGSAAQAPSVGDINGDGKLELVVGTSTGH----VWAVDGETGNVLKPFPI--KTGASIYSPALLVDL 563
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT5_9STRA) HSP 1 Score: 142 bits (358), Expect = 4.710e-34 Identity = 96/281 (34.16%), Postives = 132/281 (46.98%), Query Frame = 1
Query: 133 AAYADAMRQWGEYGTGPFPNDDGI-GWW-ANYGDDFDLIGLEEGEDFGKRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTD--TSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVAL 963
A Y D +G+ T + DD + G+W A YG + G V + H A P D + MI++VSYF +R+Y G EK V G L +DF WLW L + T+ E + A + ASPTV DLDGDG LEVVV TA G ++ +DA SG R GFP+ + I+ QV E W++ SG+ T+ +GDVDG+G LDVV VT+ +G ++A+ A SG L +P+ L
Sbjct: 155 AGYDDWKAAYGDVYTSAYMGDDLMAGYWDAAYGGMPPHLRRGGGXGAANATSAYVHVDAHCLAPPTMADVDGDGSAEMIIAVSYFFDRRQYEGGRGLPEGVRPEKYVGGGLLAFDFALQDWLWTVHL-DLTTDETRHRAYIYASPTVADLDGDGHLEVVVSTAMGLVYALDAESGEVRKGFPVQFGEIQAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVWHRRTSGAMTNAAVVGDVDGDGQLDVVIAVTSPDGEGHLYAMDAASGRDLDGWPLRL 434
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Uncharacterized (protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54XH8_DICDI) HSP 1 Score: 141 bits (355), Expect = 2.520e-33 Identity = 89/266 (33.46%), Postives = 142/266 (53.38%), Query Frame = 1
Query: 247 LEEGEDFGKRAGEVVEIQPHISAAPVFLDAEDGQG-KRMIVSVSYFKSKRRY----FGTDTSAGA-AEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAG 1026
L++ + F ++ E + + HI + PV D DG G ++VSVSY+ +Y + + G E VAG ++ ++ + W L TT +G V SPTV DL+ DGKLE+++GTA G L+V+D +PL+ E I Q+V D+ D RLE+++ D+ G VVC DG E W++ ++G T ++GD+DG+G LDVV T ++A + ++G PL YP L+ I +P+ L++ + G
Sbjct: 276 LQDNKWFSRKTSEYIWVDSHILSTPVIADI-DGDGINELVVSVSYYYDPEKYENPHYKSQLDDGVQVENYVAGGISVFNLATGEIKWQTHLDLTTDKTDFKGL-VYGSPTVVDLNNDGKLEIIIGTALGFLYVLDYQGVPLTGNYPLVLESIFTQIVTEDLDSDGRLELIVIDTKGNVVCFNSDGDEIWSQQVTGKTEFPPSIGDLDGDGILDVVMSTFTTG----IFAWNGKTGKPLQGYP--LKFEPSIISPLLLLETNDNNGG 533
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: Hypothetical (protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M462_9CRYP) HSP 1 Score: 134 bits (337), Expect = 1.190e-31 Identity = 93/266 (34.96%), Postives = 133/266 (50.00%), Query Frame = 1
Query: 262 DFGKRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRY--------FGTDTSAGAAEKVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQRFAGSMG 1035
D + AG V + H+ P+ D + ++ +VSY+ + +Y DT G K V G +A +D W L TT R A + ++PTV DLD DGKLEV+VGT+ G L+V+D G R+ FP+ I+GQV +ADV+ D LE++ D+ V G E W + LSG ++ TLGDV+G+G +DVV T +WAL+ +G L N+PV R G AP ++ AGS G
Sbjct: 19 DRPREAGAVY-VDAHVLCTPIVADLDRDGRDEVVFAVSYYFDRDQYSDPAAWEDLDADTRLG---KYVGGGVAVYDIASRALKWHTHLDLTTDETAFR-AYIYSAPTVADLDKDGKLEVIVGTSLGFLYVLDCD-GRTRENFPVTMAEIQGQVGVADVNDDGELELVATDTRHNVAVFDRHGTELWERHLSGFSSQGPTLGDVNGDGVVDVVVATTNGH----IWALNGRTGETLRNFPV--RAGGGFMAPPMILRTRNSGAGSAG 272
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Match: protein (DEFECTIVE IN EXINE FORMATION 1 isoform X1 n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB12B16) HSP 1 Score: 135 bits (341), Expect = 1.910e-31 Identity = 87/253 (34.39%), Postives = 139/253 (54.94%), Query Frame = 1
Query: 271 KRAGEVVEIQPHISAAPVFLDAEDGQGKRMIVSVSYFKSKRRYFGTDTSA--GAAE--KVVAGSLACWDFEDSKWLWIHDLGETTSGEQKRGAPVDASPTVGDLDGDGKLEVVVGTARGGLHVVDASSGSARDGFPLMYEPIRGQVVIADVHGDERLEMLLADSSGAVVCVTHDGKECWNKVLSGSTTSMLTLGDVDGNGALDVVAGVTTAEGSAEVWALSAESGLPLPNYPVALRNRKGISAPITLVDLHQR 1017
+R V I HI + PV D ++ MI++VSYF + Y + S G + K VAG + ++ + + W H L ++T + R A + +SPTV DLDGDG +++++GT+ G +V+D G R+ FPL I+G VV AD++ D ++E++ AD++G VV T GKE W + + ++GDVDG+G DVV V T G+ ++ LS + G + YP R + + LVDL+++
Sbjct: 358 ERPDNYVNIDSHILSTPVIADIDNDGVSEMIIAVSYFFDREYYDNPEHSKELGGIDIGKYVAGGIVVFNLDTKQVKWTHQLDQSTDTGKFR-AYIYSSPTVVDLDGDGNMDILIGTSYGMFYVLD-HRGKVRENFPLGMAEIQGAVVAADINDDGKIELVTADTNGNVVAWTAQGKEIWEQHIKSLVPQGPSIGDVDGDGHTDVV--VPTISGN--IYVLSGKDGSFVRPYPYRTHGR--VMNQVLLVDLNKQ 602 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8964.17055.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8964.17055.1 >prot_E_fasciculatus_S2_contig8964.17055.1 ID=prot_E_fasciculatus_S2_contig8964.17055.1|Name=mRNA_E_fasciculatus_S2_contig8964.17055.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=357bp EGGDSTAAGNGRIEHQWAGDSFEGGVFQEGGGAALDGESAYDTAAAYADAback to top mRNA from alignment at E_fasciculatus_S2_contig8964:450..6330- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8964.17055.1 ID=mRNA_E_fasciculatus_S2_contig8964.17055.1|Name=mRNA_E_fasciculatus_S2_contig8964.17055.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5881bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8964:450..6330- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8964:450..6330- >mRNA_E_fasciculatus_S2_contig8964.17055.1 ID=mRNA_E_fasciculatus_S2_contig8964.17055.1|Name=mRNA_E_fasciculatus_S2_contig8964.17055.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1071bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8964:450..6330- (Ectocarpus fasciculatus EfasUO2)back to top |