mRNA_E_fasciculatus_S2_contig8944.17040.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3N0_9PHAE) HSP 1 Score: 400 bits (1027), Expect = 1.590e-138 Identity = 203/209 (97.13%), Postives = 208/209 (99.52%), Query Frame = 1
Query: 1 MSASWSHAKSRLVFGSGFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDNIPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
MSASWSHAKSRLVFGSGFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLG+NIPLVGVNSDPNRAEE+++TTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRL+TSIKSTFTETKLPPTLNDLLL NPNPAAVSRFRL
Sbjct: 1 MSASWSHAKSRLVFGSGFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGNNIPLVGVNSDPNRAEEIMNTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLETSIKSTFTETKLPPTLNDLLLANPNPAAVSRFRL 209
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: ATP-NAD (kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI66_9STRA) HSP 1 Score: 263 bits (673), Expect = 4.010e-85 Identity = 131/193 (67.88%), Postives = 160/193 (82.90%), Query Frame = 1
Query: 49 GFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDNIPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
GFR++LVVVK + YE Y LKAQGKAP A+RWERLKNR+ IHRECVA+V+ +L +H Y++VGREELDRQHIS DLV++VGGDGTVLSASHFL D+ PL+G+NSDP + E+ KK DERRSFGALCMC+A ++ E+LP+VL RE+EP RTR+QT I+STFTETKLPP LND+L+ +P PAAVSRFRL
Sbjct: 5 GFRRLLVVVKQTPYEMYSQLKAQGKAPLALRWERLKNRYMIHRECVANVQNILEQHSVRYSVVGREELDRQHISGADLVLAVGGDGTVLSASHFLDDSTPLLGINSDPGKEEDK-QVIKKADERRSFGALCMCSADNMHEILPRVLHREVEPSYRTRIQTVIRSTFTETKLPPALNDILVAHPIPAAVSRFRL 196
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YMW2_NANGC) HSP 1 Score: 236 bits (602), Expect = 3.810e-74 Identity = 120/215 (55.81%), Postives = 160/215 (74.42%), Query Frame = 1
Query: 1 MSASWSHAKSRLV-----FGSG-FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDNIPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
+ AS + ++RL+ G G FR++L+VVKH+ YE Y +K+QGKAP A+RWERLK+RH +H+ECV + +L R ++++VGREELDRQH+ VDLV++VGGDGTVLS SHFL D IPL+GVNSDP+R +E KK DERRSFGALC CTA ++ E++P +L + + RRTR+QT ++ ETKLPP LND+L+ +P PAAVSRFRL
Sbjct: 12 LGASSARGETRLIPYRRGMGVGHFRRLLLVVKHTPYEMYLQMKSQGKAPLALRWERLKHRHQVHKECVQDLSDLLRRMDMDFSMVGREELDRQHLKNVDLVVAVGGDGTVLSCSHFLDDTIPLLGVNSDPSRDDEK-KVNKKLDERRSFGALCACTASNMFEVIPDILHGQNQAGRRTRIQTVVRDALKETKLPPALNDILVAHPIPAAVSRFRL 225
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEK7_9ARCH) HSP 1 Score: 210 bits (535), Expect = 2.080e-65 Identity = 109/192 (56.77%), Postives = 143/192 (74.48%), Query Frame = 1
Query: 52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDNIPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
F ILVVVK + YE+Y+ LK QGKAP A+RWERL NR+ +H +CV +VE VL +Y+ +GREEL R I DLVI+VGGDGTVL+ S F+ D+IP++G+NSDP R EE T K DERRS GALC +A +++E LP++L ++ P RTR+Q ++ST+TET+LPP LND+L+T+P PAAVSRFRL
Sbjct: 7 FNNILVVVKQTPYETYRQLKNQGKAPVALRWERLLNRYQVHTKCVENVEAVLKHVGIQYSKIGREELHRGIIQDKDLVIAVGGDGTVLNVSSFIDDSIPVLGINSDPTRPEEQGVTNLK-DERRSRGALCAISANNLDEYLPRILYGDITPGLRTRIQCLVRSTYTETRLPPALNDILVTHPIPAAVSRFRL 197
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I1B0_9STRA) HSP 1 Score: 215 bits (547), Expect = 2.420e-65 Identity = 110/194 (56.70%), Postives = 147/194 (75.77%), Query Frame = 1
Query: 52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKK-TDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
FR +LVV+K +AYE Y LK +G+AP A+RW+RL++R+ H+ CV + R+L HK +++ V R ELDRQH++ VDLV++VGGDGTVLS++HFL IPL+G+NSDP E+ S KK TDERRS GALCMCTA D+E+ + +VL RTR+QT++KSTF+ET+L P LNDLL+ NP+PAAVSRFR+
Sbjct: 7 FRNLLVVIKQTAYEEYSQLKLRGQAPKALRWKRLESRYKDHKSCVNDLLRILRHHKVDFSCVNRVELDRQHLANVDLVVAVGGDGTVLSSAHFLDHGTIPLLGINSDPITTEDQKSVKKKKTDERRSHGALCMCTANDMEDGIARVLHGGATLLPRTRIQTTVKSTFSETRLVPALNDLLIANPSPAAVSRFRM 200
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VHZ6_9STRA) HSP 1 Score: 213 bits (542), Expect = 9.300e-65 Identity = 105/193 (54.40%), Postives = 149/193 (77.20%), Query Frame = 1
Query: 52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
++ +LVV+K +AYE YK+LK +G+AP A+RW+RL++R+ H++CV + +L +++ +++ V R ELDRQH++ VDL+++VGGDGTVLSA+HFL IPL+G+NSDPN +E S KK+DERRS GALCMCTA D+E L VL + R+R+Q ++KSTF+ET+L P LNDLL+ NP+PAAVSRFR+
Sbjct: 18 YKNLLVVIKQTAYEEYKSLKLRGQAPKALRWQRLESRYKAHKQCVNDLLEILRKNEVKFSCVNRVELDRQHLAGVDLLVAVGGDGTVLSAAHFLDHGTIPLLGINSDPNTRKEDCSVKKKSDERRSHGALCMCTAHDMENGLLNVLYGDANIGVRSRIQCTVKSTFSETRLVPALNDLLIANPSPAAVSRFRM 210
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EG08_TRICV) HSP 1 Score: 209 bits (532), Expect = 1.210e-64 Identity = 109/194 (56.19%), Postives = 143/194 (73.71%), Query Frame = 1
Query: 52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKK-TDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
FR +LVV+K +AYE Y LK +G+AP A+RW+RL++R++ H+ CV + L RH ++ V R ELDRQH++ VDLV++VGGDGTVLSA+HFL IPL+G+NSDP E+ S KK TDERRS GALCMCT+ D+ E + +VL RTR+QT +KSTF+ET+L P LNDLL+ NP+PAAVSRFR+
Sbjct: 16 FRNLLVVIKQTAYEEYSQLKLRGQAPKALRWKRLESRYEAHKACVNDLLGTLRRHDVRFSCVNRVELDRQHLADVDLVVAVGGDGTVLSAAHFLDHGTIPLLGINSDPITEEDRTSVKKKKTDERRSHGALCMCTSNDMHEGMARVLYGGGSLIPRTRIQTIVKSTFSETRLVPALNDLLIANPSPAAVSRFRM 209
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QKB1_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.440e-63 Identity = 108/195 (55.38%), Postives = 144/195 (73.85%), Query Frame = 1
Query: 46 SGFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
S FRKILVV+K +A+E Y L+ +GKAP A+RW RL+NR+ H+ CV ++ +L H E++ V R ELDRQH++ VD+V++VGGDGT LSA+HFL IPL+GVNSDP + + T KKTDERRS GALCMCTA ++ + + KVL Q R R+Q ++KSTF+ET+L P LND+L+ NP+PAAVSRFR+
Sbjct: 12 SHFRKILVVIKQTAFEEYSQLRLRGKAPKALRWPRLENRYKAHKACVNNLTGILRHHNIEFSCVNRVELDRQHLANVDMVMAVGGDGTCLSAAHFLDHGTIPLLGVNSDPIKESDR-DTKKKTDERRSHGALCMCTADNMSDQIAKVLYGGGIIQERARIQCTVKSTFSETRLVPALNDVLIANPSPAAVSRFRM 205
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEH2_9STRA) HSP 1 Score: 209 bits (533), Expect = 3.480e-63 Identity = 107/193 (55.44%), Postives = 143/193 (74.09%), Query Frame = 1
Query: 52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
F+++LVV+K +AYE Y LK +G+AP A+RW+RL++R+ H++CV + VL H+ E++ V R ELDRQH++ VDLV++VGGDGTVLSA+HFL IPL+G+NSDP + + KKTDERRS GALCM TA ++EE + KVL + R R+Q +KSTF ETKL P LNDLL+ NP+PAAVSRFR+
Sbjct: 13 FQRLLVVIKQTAYEEYSQLKLRGQAPKALRWKRLESRYKSHKKCVNDLLGVLRHHRVEFSCVNRVELDRQHLANVDLVVAVGGDGTVLSAAHFLDHGTIPLLGINSDPISEADRTTVKKKTDERRSHGALCMFTAANMEEGMAKVLYGGGKLSHRNRIQCIVKSTFAETKLVPALNDLLIANPSPAAVSRFRM 205
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDP7_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.430e-61 Identity = 107/194 (55.15%), Postives = 140/194 (72.16%), Query Frame = 1
Query: 52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKKT-DERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
FRK+LVV+K +AYE Y LK +G+AP A+RW RL++R+ H++CV + L HK ++ V R ELDRQH+S VDLV++VGGDGTVLSASHFL IPL+G+NSDP +E S K+ DERRS GALC CT+ D+ L ++L RTR+Q +K+TFTET+L PTLND+L+ NP+PAAVSRFR+
Sbjct: 11 FRKLLVVIKQTAYEEYSQLKLRGQAPKALRWNRLESRYKAHKQCVNDLLASLRHHKVDFLCVNRVELDRQHLSNVDLVVAVGGDGTVLSASHFLDHGTIPLLGINSDPITRDESKSVKNKSADERRSHGALCACTSNDMHRGLSRILYGGGHLSSRTRIQCVLKTTFTETRLVPTLNDMLICNPSPAAVSRFRM 204 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8944.17040.1 >prot_E_fasciculatus_S2_contig8944.17040.1 ID=prot_E_fasciculatus_S2_contig8944.17040.1|Name=mRNA_E_fasciculatus_S2_contig8944.17040.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=209bp MSASWSHAKSRLVFGSGFRKILVVVKHSAYESYKALKAQGKAPTAVRWERback to top mRNA from alignment at E_fasciculatus_S2_contig8944:1..3836- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8944.17040.1 ID=mRNA_E_fasciculatus_S2_contig8944.17040.1|Name=mRNA_E_fasciculatus_S2_contig8944.17040.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3836bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8944:1..3836- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8944:1..3836- >mRNA_E_fasciculatus_S2_contig8944.17040.1 ID=mRNA_E_fasciculatus_S2_contig8944.17040.1|Name=mRNA_E_fasciculatus_S2_contig8944.17040.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=627bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8944:1..3836- (Ectocarpus fasciculatus EfasUO2)back to top |