mRNA_E_fasciculatus_S2_contig8944.17040.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8944.17040.1
Unique NamemRNA_E_fasciculatus_S2_contig8944.17040.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3N0_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 1.590e-138
Identity = 203/209 (97.13%), Postives = 208/209 (99.52%), Query Frame = 1
Query:    1 MSASWSHAKSRLVFGSGFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDNIPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            MSASWSHAKSRLVFGSGFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLG+NIPLVGVNSDPNRAEE+++TTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRL+TSIKSTFTETKLPPTLNDLLL NPNPAAVSRFRL
Sbjct:    1 MSASWSHAKSRLVFGSGFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGNNIPLVGVNSDPNRAEEIMNTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLETSIKSTFTETKLPPTLNDLLLANPNPAAVSRFRL 209          
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: ATP-NAD (kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI66_9STRA)

HSP 1 Score: 263 bits (673), Expect = 4.010e-85
Identity = 131/193 (67.88%), Postives = 160/193 (82.90%), Query Frame = 1
Query:   49 GFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDNIPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            GFR++LVVVK + YE Y  LKAQGKAP A+RWERLKNR+ IHRECVA+V+ +L +H   Y++VGREELDRQHIS  DLV++VGGDGTVLSASHFL D+ PL+G+NSDP + E+     KK DERRSFGALCMC+A ++ E+LP+VL RE+EP  RTR+QT I+STFTETKLPP LND+L+ +P PAAVSRFRL
Sbjct:    5 GFRRLLVVVKQTPYEMYSQLKAQGKAPLALRWERLKNRYMIHRECVANVQNILEQHSVRYSVVGREELDRQHISGADLVLAVGGDGTVLSASHFLDDSTPLLGINSDPGKEEDK-QVIKKADERRSFGALCMCSADNMHEILPRVLHREVEPSYRTRIQTVIRSTFTETKLPPALNDILVAHPIPAAVSRFRL 196          
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YMW2_NANGC)

HSP 1 Score: 236 bits (602), Expect = 3.810e-74
Identity = 120/215 (55.81%), Postives = 160/215 (74.42%), Query Frame = 1
Query:    1 MSASWSHAKSRLV-----FGSG-FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDNIPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            + AS +  ++RL+      G G FR++L+VVKH+ YE Y  +K+QGKAP A+RWERLK+RH +H+ECV  +  +L R   ++++VGREELDRQH+  VDLV++VGGDGTVLS SHFL D IPL+GVNSDP+R +E     KK DERRSFGALC CTA ++ E++P +L  + +  RRTR+QT ++    ETKLPP LND+L+ +P PAAVSRFRL
Sbjct:   12 LGASSARGETRLIPYRRGMGVGHFRRLLLVVKHTPYEMYLQMKSQGKAPLALRWERLKHRHQVHKECVQDLSDLLRRMDMDFSMVGREELDRQHLKNVDLVVAVGGDGTVLSCSHFLDDTIPLLGVNSDPSRDDEK-KVNKKLDERRSFGALCACTASNMFEVIPDILHGQNQAGRRTRIQTVVRDALKETKLPPALNDILVAHPIPAAVSRFRL 225          
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEK7_9ARCH)

HSP 1 Score: 210 bits (535), Expect = 2.080e-65
Identity = 109/192 (56.77%), Postives = 143/192 (74.48%), Query Frame = 1
Query:   52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDNIPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            F  ILVVVK + YE+Y+ LK QGKAP A+RWERL NR+ +H +CV +VE VL     +Y+ +GREEL R  I   DLVI+VGGDGTVL+ S F+ D+IP++G+NSDP R EE   T  K DERRS GALC  +A +++E LP++L  ++ P  RTR+Q  ++ST+TET+LPP LND+L+T+P PAAVSRFRL
Sbjct:    7 FNNILVVVKQTPYETYRQLKNQGKAPVALRWERLLNRYQVHTKCVENVEAVLKHVGIQYSKIGREELHRGIIQDKDLVIAVGGDGTVLNVSSFIDDSIPVLGINSDPTRPEEQGVTNLK-DERRSRGALCAISANNLDEYLPRILYGDITPGLRTRIQCLVRSTYTETRLPPALNDILVTHPIPAAVSRFRL 197          
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I1B0_9STRA)

HSP 1 Score: 215 bits (547), Expect = 2.420e-65
Identity = 110/194 (56.70%), Postives = 147/194 (75.77%), Query Frame = 1
Query:   52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKK-TDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            FR +LVV+K +AYE Y  LK +G+AP A+RW+RL++R+  H+ CV  + R+L  HK +++ V R ELDRQH++ VDLV++VGGDGTVLS++HFL    IPL+G+NSDP   E+  S  KK TDERRS GALCMCTA D+E+ + +VL        RTR+QT++KSTF+ET+L P LNDLL+ NP+PAAVSRFR+
Sbjct:    7 FRNLLVVIKQTAYEEYSQLKLRGQAPKALRWKRLESRYKDHKSCVNDLLRILRHHKVDFSCVNRVELDRQHLANVDLVVAVGGDGTVLSSAHFLDHGTIPLLGINSDPITTEDQKSVKKKKTDERRSHGALCMCTANDMEDGIARVLHGGATLLPRTRIQTTVKSTFSETRLVPALNDLLIANPSPAAVSRFRM 200          
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VHZ6_9STRA)

HSP 1 Score: 213 bits (542), Expect = 9.300e-65
Identity = 105/193 (54.40%), Postives = 149/193 (77.20%), Query Frame = 1
Query:   52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            ++ +LVV+K +AYE YK+LK +G+AP A+RW+RL++R+  H++CV  +  +L +++ +++ V R ELDRQH++ VDL+++VGGDGTVLSA+HFL    IPL+G+NSDPN  +E  S  KK+DERRS GALCMCTA D+E  L  VL  +     R+R+Q ++KSTF+ET+L P LNDLL+ NP+PAAVSRFR+
Sbjct:   18 YKNLLVVIKQTAYEEYKSLKLRGQAPKALRWQRLESRYKAHKQCVNDLLEILRKNEVKFSCVNRVELDRQHLAGVDLLVAVGGDGTVLSAAHFLDHGTIPLLGINSDPNTRKEDCSVKKKSDERRSHGALCMCTAHDMENGLLNVLYGDANIGVRSRIQCTVKSTFSETRLVPALNDLLIANPSPAAVSRFRM 210          
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EG08_TRICV)

HSP 1 Score: 209 bits (532), Expect = 1.210e-64
Identity = 109/194 (56.19%), Postives = 143/194 (73.71%), Query Frame = 1
Query:   52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKK-TDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            FR +LVV+K +AYE Y  LK +G+AP A+RW+RL++R++ H+ CV  +   L RH   ++ V R ELDRQH++ VDLV++VGGDGTVLSA+HFL    IPL+G+NSDP   E+  S  KK TDERRS GALCMCT+ D+ E + +VL        RTR+QT +KSTF+ET+L P LNDLL+ NP+PAAVSRFR+
Sbjct:   16 FRNLLVVIKQTAYEEYSQLKLRGQAPKALRWKRLESRYEAHKACVNDLLGTLRRHDVRFSCVNRVELDRQHLADVDLVVAVGGDGTVLSAAHFLDHGTIPLLGINSDPITEEDRTSVKKKKTDERRSHGALCMCTSNDMHEGMARVLYGGGSLIPRTRIQTIVKSTFSETRLVPALNDLLIANPSPAAVSRFRM 209          
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QKB1_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.440e-63
Identity = 108/195 (55.38%), Postives = 144/195 (73.85%), Query Frame = 1
Query:   46 SGFRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            S FRKILVV+K +A+E Y  L+ +GKAP A+RW RL+NR+  H+ CV ++  +L  H  E++ V R ELDRQH++ VD+V++VGGDGT LSA+HFL    IPL+GVNSDP +  +   T KKTDERRS GALCMCTA ++ + + KVL      Q R R+Q ++KSTF+ET+L P LND+L+ NP+PAAVSRFR+
Sbjct:   12 SHFRKILVVIKQTAFEEYSQLRLRGKAPKALRWPRLENRYKAHKACVNNLTGILRHHNIEFSCVNRVELDRQHLANVDMVMAVGGDGTCLSAAHFLDHGTIPLLGVNSDPIKESDR-DTKKKTDERRSHGALCMCTADNMSDQIAKVLYGGGIIQERARIQCTVKSTFSETRLVPALNDVLIANPSPAAVSRFRM 205          
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEH2_9STRA)

HSP 1 Score: 209 bits (533), Expect = 3.480e-63
Identity = 107/193 (55.44%), Postives = 143/193 (74.09%), Query Frame = 1
Query:   52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            F+++LVV+K +AYE Y  LK +G+AP A+RW+RL++R+  H++CV  +  VL  H+ E++ V R ELDRQH++ VDLV++VGGDGTVLSA+HFL    IPL+G+NSDP    +  +  KKTDERRS GALCM TA ++EE + KVL    +   R R+Q  +KSTF ETKL P LNDLL+ NP+PAAVSRFR+
Sbjct:   13 FQRLLVVIKQTAYEEYSQLKLRGQAPKALRWKRLESRYKSHKKCVNDLLGVLRHHRVEFSCVNRVELDRQHLANVDLVVAVGGDGTVLSAAHFLDHGTIPLLGINSDPISEADRTTVKKKTDERRSHGALCMFTAANMEEGMAKVLYGGGKLSHRNRIQCIVKSTFAETKLVPALNDLLIANPSPAAVSRFRM 205          
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDP7_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.430e-61
Identity = 107/194 (55.15%), Postives = 140/194 (72.16%), Query Frame = 1
Query:   52 FRKILVVVKHSAYESYKALKAQGKAPTAVRWERLKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGGDGTVLSASHFLGDN-IPLVGVNSDPNRAEEMISTTKKT-DERRSFGALCMCTALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPNPAAVSRFRL 627
            FRK+LVV+K +AYE Y  LK +G+AP A+RW RL++R+  H++CV  +   L  HK ++  V R ELDRQH+S VDLV++VGGDGTVLSASHFL    IPL+G+NSDP   +E  S   K+ DERRS GALC CT+ D+   L ++L        RTR+Q  +K+TFTET+L PTLND+L+ NP+PAAVSRFR+
Sbjct:   11 FRKLLVVIKQTAYEEYSQLKLRGQAPKALRWNRLESRYKAHKQCVNDLLASLRHHKVDFLCVNRVELDRQHLSNVDLVVAVGGDGTVLSASHFLDHGTIPLLGINSDPITRDESKSVKNKSADERRSHGALCACTSNDMHRGLSRILYGGGHLSSRTRIQCVLKTTFTETRLVPTLNDMLICNPSPAAVSRFRM 204          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8944.17040.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.590e-13897.13protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
ATP-NAD4.010e-8567.88kinase-like domain-containing protein n=1 Tax=Trib... [more]
Uncharacterized3.810e-7455.81protein (Fragment) n=2 Tax=Nannochloropsis gaditan... [more]
Uncharacterized2.080e-6556.77protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A48... [more]
Hypothetical2.420e-6556.70protein n=1 Tax=Odontella aurita TaxID=265563 RepI... [more]
Hypothetical9.300e-6554.40protein n=1 Tax=Grammatophora oceanica TaxID=21045... [more]
Hypothetical1.210e-6456.19protein (Fragment) n=1 Tax=Trieres chinensis TaxID... [more]
Hypothetical1.440e-6355.38protein n=1 Tax=Chaetoceros debilis TaxID=122233 R... [more]
Hypothetical3.480e-6355.44protein n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
Hypothetical1.430e-6155.15protein n=1 Tax=Proboscia inermis TaxID=420281 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8944contigE_fasciculatus_S2_contig8944:1..3836 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score407.1
Seed ortholog evalue4.8e-111
Seed eggNOG ortholog2880.D8LNS5
Preferred nameNADK2
Model size627
KEGG rclassRC00002,RC00078
KEGG koko:K00858
KEGG ReactionR00104
KEGG Pathwayko00760,ko01100,map00760,map01100
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0031974,GO:0034641,GO:0034654,GO:0042736,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046496,GO:0046983,GO:0051186,GO:0051188,GO:0055086,GO:0070013,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons7
EggNOG free text desc.NADP biosynthetic process
EggNOG OGsKOG4180@1,KOG4180@2759
Ec32 ortholog descriptionATP-NAD kinase, PpnK-type, all-beta
Ec32 orthologEc-08_006010.1
EC2.7.1.23
Cds size627
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8944.17040.1prot_E_fasciculatus_S2_contig8944.17040.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8944 1..3836 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842548.0002325-CDS-E_fasciculatus_S2_contig8944:0..481696842548.0002325-CDS-E_fasciculatus_S2_contig8944:0..48Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8944 1..48 -
1696842548.021769-CDS-E_fasciculatus_S2_contig8944:556..5981696842548.021769-CDS-E_fasciculatus_S2_contig8944:556..598Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8944 557..598 -
1696842548.035681-CDS-E_fasciculatus_S2_contig8944:1089..11461696842548.035681-CDS-E_fasciculatus_S2_contig8944:1089..1146Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8944 1090..1146 -
1696842548.0528193-CDS-E_fasciculatus_S2_contig8944:1941..21481696842548.0528193-CDS-E_fasciculatus_S2_contig8944:1941..2148Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8944 1942..2148 -
1696842548.0689526-CDS-E_fasciculatus_S2_contig8944:2326..24381696842548.0689526-CDS-E_fasciculatus_S2_contig8944:2326..2438Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8944 2327..2438 -
1696842548.0801244-CDS-E_fasciculatus_S2_contig8944:3019..30871696842548.0801244-CDS-E_fasciculatus_S2_contig8944:3019..3087Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8944 3020..3087 -
1696842548.0910807-CDS-E_fasciculatus_S2_contig8944:3743..38361696842548.0910807-CDS-E_fasciculatus_S2_contig8944:3743..3836Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8944 3744..3836 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8944.17040.1

>prot_E_fasciculatus_S2_contig8944.17040.1 ID=prot_E_fasciculatus_S2_contig8944.17040.1|Name=mRNA_E_fasciculatus_S2_contig8944.17040.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=209bp
MSASWSHAKSRLVFGSGFRKILVVVKHSAYESYKALKAQGKAPTAVRWER
LKNRHDIHRECVASVERVLTRHKSEYALVGREELDRQHISKVDLVISVGG
DGTVLSASHFLGDNIPLVGVNSDPNRAEEMISTTKKTDERRSFGALCMCT
ALDVEEMLPKVLLREMEPQRRTRLQTSIKSTFTETKLPPTLNDLLLTNPN
PAAVSRFRL
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mRNA from alignment at E_fasciculatus_S2_contig8944:1..3836-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8944.17040.1 ID=mRNA_E_fasciculatus_S2_contig8944.17040.1|Name=mRNA_E_fasciculatus_S2_contig8944.17040.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3836bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8944:1..3836- (Ectocarpus fasciculatus EfasUO2)
ATGTCGGCTAGCTGGAGTCATGCGAAGAGCAGACTGGTGTTTGGCTCGGG CTTCAGAAAGATTCTCGTGGTGGTGAAGCACAGTGCTTACGAGGTAAGAG GTAGAGAAGGCAGAAAAAAAGCAGCGGGCCAATCTGAATCTTGGGAGCAC TCATGTTTCCCAGCTGATCGTGCTCGGGACTGCTGTGCTGTTGCGTTGCA TGCTGTCAGCTAACAGCAGCCGAAGGAATTGAACAGAAAACCGCCGCAGC AGGACGTTCTGCTGCCGTGCTGTACTGCTACTCTTGTTCGTCTTTGTATT TACAACTGTGACGCCGAGCGGTGCTGGCGAGGTTCTTGCTGTCTACATGT TAGGATCCCGTCGATAGCGATGGTTGGTGATTCAAAATGTGCATTGTTGC GTTTTTTTTTGGCAGAGTTCGTGTCTGGTGTGACGGCTGATGACGCGCCA GAGATGAGTGGAGGTGGAGGTTGTCAGCAGCACTAGAAGCAGCAGCGGTG GTGGTGGGCATCATGTGTGAATGCTGATCATCCCGTGTCCCTGGCTCGTG TTGGGAACGCGTTGCTCCGGTAGCGGTGATTGCCAGGCCCTTTGTTGCCG ATAGCGGATAGCGGGCAAGGATGATTCACCGGCGCAACAAATGCCCGAAC GGTTCTCCCTTTGTACTGCCGTACTGCTGCATGCAATCATGAATACATCG CTCGCTGTGCTATGCTCCTAAGAAGCGCCTAACGTTATACATTGCGCAGT CATACAAAGCGCTCAAGGCGCAGGGGAAAGCTCCGACGGCCGTGAGGTGG GAGAGGCTCAAGAACCGGTGAGTGACGCGGCGAAGTATACCGTAATCTGC AAGCGAATATGCCAATAATACTACTCTGCAAGTGCCGCCCTTTTTTCTTT GAGTAATTTTTAAAGTACTGCTGAAATTCCCTACGGCACCCCCCGGCGCC GCGAGAGGCGAAAGCCCGGAGATGCTGTGTAAAACATAAAACATAACCTC CTCATTGAACCTACGGATGGTGTTGTACGCAGGCACCCTGGTGCGCAGGC ACCCTGGTGCGAAGATGCGATACAGTATTGAGCAAGACCACAAAGGCTTA CTGGACCAGCGTACCAGCACATCTACGTTCCAGGGACCCCTAGCAAAGCA CGCACACCAATTCAAACTCAGATGTCGGCGGAGACTCGTTAAATCTCCAA TAAGTGACCCGAAGTACATGCCATTGTCGGCCGGTGGATATATCCATAAG GCAAACAAACGTTGATGTACGATTGTGCGGTTTCCAAACATACTGTTGTT GCCCTGCTGCCCTGCTGCCCTGCTGCTCACGTCCCACTGCTTTTCAATGG TGCCCTATTGTATGAACCACCGACGAAACCGTCTATGGCGTCCATCAGCC ACGACATCCACCGCGAGTGCGTCGCCTCAGTGGAGAGGGTGCTGACCAGG CACAAGTCGGAGTATGCCTTGGTCGGCAGGGAGGAGCTAGATCGCCAGCA CATATCGAAGGTCAGGGGAGATGAGAGGCACATGTGATGCAGTTGGGCAA CAGCGTCAAGGGCTCCTTGGTGTCCTTATCCGGAGTAAGAGCAGGAAAGG GTGCGTCGCTTGTCGCTGGTGCTGAGACCGGTACCAAACAATGTGCGTCC ACCCTCCCACCGAAAATCTCATCTGCGCCACACGCCAGGTAGACTTGGTG ATTTCCGTGGGCGGGGACGGGACGGTTTTGTCGGCGAGCCACTTCCTCGG GGACAACATCCCGCTCGTGGGCGTCAACAGCGATCCCAACAGGGCGGAGG AGATGATCAGCACCACCAAGAAGACCGATGAGAGAAGGAGCTTCGGAGCG CTGTGCATGTGCACCGCTCTCGACGTTGAGGAGATGCTCCCCAAGGTGTG GTACGGCAGGGCGCGGTGCAGGTTTTGGGGTAGAACAGTGGTCTGCGATA CCGCCGTGACGCCCGAAAGAAAATGATCGCTCTTGTTTCGGAGGGTTTCG TGCTTAGCTGTCAGTGTGCCGCGCGCGTTTAGAGGGGCTTGATGACATAC CCGCCGAAGCCAGGATGTGTGTCTGAGACACGGCGGTTTTCCTTGGTGCT GCACGTATGTCGTTGTGTCTTTTGCTCTTCAAGACAAGACAAGCCATCCC TGTACGCTCCTGTCTCGACAAGTCTGTGGTGCCGCATCAACGCCCTTGCC GATGGAATCAAAAGAGTAACACCCTCTCGGCGGCCGTGGAAAGCTTGCGC GATACATTATGCATACGTACGTCAATTTTTCGAACACGCCGTGCAGCCCT CGGCGACATTTTCCTCCAGCCTCCTTTCCCCCCACTCCACAGTGCCCGAG CAAATCGTCCCATAGATAACGTCGTCAATGCACTGAACGACTACATAGTA CGAGGTGTAGACAACACGCGTCGGACCTCGTGCGTGGTAATTTGGATGGT CACGGTCCATCCCGGTCGCCCTCCGCTTGACGCACCAAACTCCGCACTCC TCGGCGCTTCTCACGTGGGGTAACGTTTCCTCCCTTGTCGGTGATACTTG AAGTGCTTTGTCACGGTGGTGGTTTTGGAGGAACAAATCGCGAGCATGTT GGCGACTACAAGCCCCGCCTGTCAGTCACATGTTTCCTTTGTGCGGGGCG TTTCTTTTCGTTTCGGGGCGGGACGCTGCCTCTGTGACAGGTCTTGCTGA GGGAAATGGAGCCGCAACGGCGAACACGACTGCAAACATCCATCAAGGTC GGTCTGTCGAGGAAGCGTCGTTTTGGAGAATCACGAGAGAAAATCGTGAT GTCGTCCATTCTTATCGAGCAAGTGGGGCCTCACCCCCAAAACGTTTTCT CTCAAATCGTTGGAATTCTGGCTGACTCGTGTTTAGCGGCTCTTTCGAGG TCGGCTTTAAACGTACCCGGAAACGTTTTTCGTGCCCTTGGTGCGTCGCG TCGCGTTGCAACGCGTTGCAACTAGAGATTTCCCTGGCGTGCTTGTTTTA ATTGTCATGAGTTTCGATTCCAACTGTCGAGAAGATTGGTCTGAGCCATT TCGTGCTCCGTCCGGCGTTGCCTCTCCTGTAAGATTAATTGTATCTTTTG CTCTCTTTGCCCCCTAGTCCGCATAGTTGTCCACAACATTTTTGGAGACG TTCGGTTTGATGCCCTTGGCCCGTGGTGACCTTGCCATTTGCTCTTTCGC CTTTACCGCGTTGCCTCAATCCCCCCTCCCCTCCTCAGAGCACGTTCACG GAGACCAAGCTGCCACCGACACTCAACGATGTAAGTTTCACATGCGTCGC TCGTTGGTTGAACCAGTTGTTGTTTTTTTCGGACTTGTGTCGTTTGACTA AGAAGCCATATTGCAAATTGAGGGGTAGCACACCGTCTCCTACGGAGATT TCCCCCCATGTGCCCCACAACACTCTACCTTGTATACGAGCGATTAGATT CTGTTCCGCAAGCACTGGCCAGAGTCGAGTCCCTTCGAGCCGCTCAAACA TTCTCCGAACAAAGCGAGGTAGAAAATTATTTTGCTCGGAAGTTGTGCGA TCAGCCGTGTGGAGATATTGCGCAAGTCTTGGTAGATCGAACTCCACAGC CTCCGCCCCAAGCAGGTGGCAGTTTGCATCACCAGATGGTTGACACGGAG GCGATGTCAACAGCAACAGTCGTCAGATTTTCGGTTCGGGTCTAGTTGAA CGACCTATCTCCGGCATCCCATGACCTGTTGTCTCTCTTTCTCCATCGCG TGTCCCCCATCTTCCGACGATCCCGTCAATACACACAGTTGTTGTTAACG AACCCTAATCCAGCGGCCGTCAGCCGATTCCGATTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8944:1..3836-

>mRNA_E_fasciculatus_S2_contig8944.17040.1 ID=mRNA_E_fasciculatus_S2_contig8944.17040.1|Name=mRNA_E_fasciculatus_S2_contig8944.17040.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=627bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8944:1..3836- (Ectocarpus fasciculatus EfasUO2)
ATGTCGGCTAGCTGGAGTCATGCGAAGAGCAGACTGGTGTTTGGCTCGGG
CTTCAGAAAGATTCTCGTGGTGGTGAAGCACAGTGCTTACGAGTCATACA
AAGCGCTCAAGGCGCAGGGGAAAGCTCCGACGGCCGTGAGGTGGGAGAGG
CTCAAGAACCGCCACGACATCCACCGCGAGTGCGTCGCCTCAGTGGAGAG
GGTGCTGACCAGGCACAAGTCGGAGTATGCCTTGGTCGGCAGGGAGGAGC
TAGATCGCCAGCACATATCGAAGGTAGACTTGGTGATTTCCGTGGGCGGG
GACGGGACGGTTTTGTCGGCGAGCCACTTCCTCGGGGACAACATCCCGCT
CGTGGGCGTCAACAGCGATCCCAACAGGGCGGAGGAGATGATCAGCACCA
CCAAGAAGACCGATGAGAGAAGGAGCTTCGGAGCGCTGTGCATGTGCACC
GCTCTCGACGTTGAGGAGATGCTCCCCAAGGTCTTGCTGAGGGAAATGGA
GCCGCAACGGCGAACACGACTGCAAACATCCATCAAGAGCACGTTCACGG
AGACCAAGCTGCCACCGACACTCAACGATTTGTTGTTAACGAACCCTAAT
CCAGCGGCCGTCAGCCGATTCCGATTG
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