mRNA_E_fasciculatus_S2_contig8930.17029.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: SAP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM35_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 8.530e-22 Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTAGDAA 150
KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPT GDAA
Sbjct: 10 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTVGDAA 59
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: SAP (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC6_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 2.010e-20 Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTAGDAA 150
KVSELK ELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPT GDAA
Sbjct: 10 KVSELKTELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTVGDAA 59
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: heterogeneous (nuclear ribonucleoprotein U-like protein 1 isoform X1 n=2 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4CA98) HSP 1 Score: 54.3 bits (129), Expect = 3.260e-7 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTAGDA 147
KV EL+AELASR LD KGNKA L +RLQ ALD+E G S TP G+A
Sbjct: 7 KVVELRAELASRGLDTKGNKAALVERLQEALDKETGGVPSEKTPDNGNA 55
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G614_PHATC) HSP 1 Score: 53.1 bits (126), Expect = 5.170e-7 Identity = 28/45 (62.22%), Postives = 30/45 (66.67%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPT 135
KV+EL+ EL R L V GNK DL RLQA LDEEEFG I P T
Sbjct: 10 KVAELRTELERRGLPVSGNKPDLINRLQARLDEEEFGLIDAPATT 54
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: SAP (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z395_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 1.130e-6 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFG 111
KV++LKAELA R+LD G K DL QRLQAALDEEEFG
Sbjct: 10 KVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFG 46
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: Hypothetical (protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ56_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 3.780e-6 Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGA--ISMPTPTAGD 144
KV+EL+A LASR L G KADL+ RLQA LDEEEFG ++ P P+ G+
Sbjct: 10 KVAELRAALASRGLPSDGLKADLSNRLQARLDEEEFGMDEVTPPPPSTGE 59
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: Hypothetical (protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3T5_CYCTE) HSP 1 Score: 50.4 bits (119), Expect = 7.080e-6 Identity = 27/45 (60.00%), Postives = 30/45 (66.67%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPT 135
KVSEL+A L R L +G KADL RLQA LDEEEFG + P T
Sbjct: 33 KVSELRAALQKRGLSTEGLKADLVNRLQARLDEEEFGMVVAPQST 77
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLW8_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 7.240e-6 Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFG 111
KV +LK ELA R+LD G KADL QRLQ ALD+EEFG
Sbjct: 16 KVQDLKDELAKRNLDTNGLKADLQQRLQTALDDEEFG 52
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: SAP (domain-containing protein n=2 Tax=Galloanserae TaxID=1549675 RepID=A0A8B9C943_9AVES) HSP 1 Score: 47.0 bits (110), Expect = 1.130e-5 Identity = 27/44 (61.36%), Postives = 29/44 (65.91%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTP 132
KVSELK EL R L KG KADL +RLQAALD+EE G P
Sbjct: 12 KVSELKEELKKRRLSDKGLKADLMERLQAALDQEEAGXXXXVNP 55
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Match: Uncharacterized (protein n=3 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RLX3_CIMLE) HSP 1 Score: 49.3 bits (116), Expect = 1.920e-5 Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query: 1 KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGA-----ISMPTPT 135
KV EL+AEL+SR LD KGNKA L +RL+ AL+EEE G+ +S P T
Sbjct: 7 KVVELRAELSSRGLDTKGNKAALVERLEKALEEEEKGSDGKHEVSQPAQT 56 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8930.17029.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8930.17029.1 >prot_E_fasciculatus_S2_contig8930.17029.1 ID=prot_E_fasciculatus_S2_contig8930.17029.1|Name=mRNA_E_fasciculatus_S2_contig8930.17029.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=50bp KVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTAGDAAback to top mRNA from alignment at E_fasciculatus_S2_contig8930:266..415- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8930.17029.1 ID=mRNA_E_fasciculatus_S2_contig8930.17029.1|Name=mRNA_E_fasciculatus_S2_contig8930.17029.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=150bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8930:266..415- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8930:266..415- >mRNA_E_fasciculatus_S2_contig8930.17029.1 ID=mRNA_E_fasciculatus_S2_contig8930.17029.1|Name=mRNA_E_fasciculatus_S2_contig8930.17029.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=150bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8930:266..415- (Ectocarpus fasciculatus EfasUO2)back to top |