mRNA_E_fasciculatus_S2_contig8919.17019.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIJ3_9PHAE) HSP 1 Score: 509 bits (1310), Expect = 7.740e-175 Identity = 279/336 (83.04%), Postives = 293/336 (87.20%), Query Frame = 1
Query: 61 MDVKERTHEFSFTFGDGGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGVLASKLCTGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADG--GDAAS--AAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGERSDNEHRDHCHSASPAAVGE----EEQQPPQXXSPEPGPSSSLRCQASSPSAPPSLSPAPVESTFLLAFARRNISIERVLEEAENLGLAWRVPDDFEPASASENIYLMSLR 1044
MDVK+RTHEFSFTFGD GDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCG+LASKLCTGG VVITDGG+EFT+SAMDALR NL++NSCNLLA SPARNG+NAA G GDAA+ AAAAG GA+VALEKLTWGEH AFLERNGGG DRT VND D+ RGGFDFVVAADVIYEEEGVSPLL TVVDILRLRAGERSD++H DHC S S AV EEQ PPQ S P SSSLRCQAS+P A PSL PAP ESTFLLAFARRNISIERVL EAE+LGLAWRVPDDFEPASASENIYLMSLR
Sbjct: 47 MDVKKRTHEFSFTFGDDGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGILASKLCTGGTVVITDGGEEFTNSAMDALRANLIKNSCNLLAHSPARNGSNAAVGCGGDAAAVGAAAAGRGARVALEKLTWGEHEAFLERNGGGSDRTTDGVNDGDN---RGGFDFVVAADVIYEEEGVSPLLRTVVDILRLRAGERSDSKHPDHCPSPSHEAVAPKDETEEQDPPQPESSGPASSSSLRCQASAPPALPSLVPAPTESTFLLAFARRNISIERVLGEAESLGLAWRVPDDFEPASASENIYLMSLR 379
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Putative (methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7F5_9STRA) HSP 1 Score: 148 bits (373), Expect = 8.260e-37 Identity = 97/228 (42.54%), Postives = 127/228 (55.70%), Query Frame = 1
Query: 61 MDVKERTHEFSFTFGDG------GDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGVLASKLCTGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADGGDAASAAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGER 726
MD R F+F F G + V + L+GV+PELGQTLASTGLTVW AA+ +A +++ R A + V+ELGAGLGLCG+L +KL GG+VV+TDGGDEFTD A+ AL + RN + +AAA + A+E+LTWG+H AFL+ + R GFD V+AADVIYE E V PLL TV +L+ + R
Sbjct: 46 MDTIPRNENFTFNFTSDAPQTQPGAGDAVTVELSGVSPELGQTLASTGLTVWTAARHLAHYLFHIRDQIAARTVIELGAGLGLCGILCAKL--GGSVVVTDGGDEFTDEALGALVEQVERNR--------------------SVTAAAF----ECAVERLTWGDHDAFLKAH-------------------REGFDVVIAADVIYEAEAVVPLLSTVTALLQAKPRAR 228
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Nicotinamide (N-methyltransferase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPS1_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.280e-25 Identity = 96/341 (28.15%), Postives = 140/341 (41.06%), Query Frame = 1
Query: 67 VKERTHEFSFTFG---DGGDDEQVCIA--LAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWF-----AGKRVVELGAGLGLCGVLASKLCTGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADGGDAASAAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGERSDNEHRDHCHSASPAAVGEEEQQPPQXXSPEPGPSSSLRCQASSPSAPPSLSPAPVESTFLLAFARRNISIERVLEEAENLGLAWRVPDDFEPASASENIYLMSLR*RGRG 1059
V +R F + +G +G D C+ L G ELGQ L TGLT+WRA +++ R++WE+R +R++ELG GLGLCG++A++L G VV+TDG + N ++N C VA L WGE+ + E + GFD V+AADVIYEE+ + PLL TV LR G+ ++ FLL++ARRN+SI+RVL A ++GL V D F ++ E++Y M L+ + G
Sbjct: 40 VMDRDECFEYVYGAAREGTDKVHDCVRVRLHGWKKELGQQLECTGLTMWRAGEDLGRYLWENRAMLFKQGQGRQRILELGCGLGLCGLVAAQLNPKGVVVLTDGDALTMQKVCRNIDENSLKNRC------------------------------CVAARTLQWGENKKIIS-------------------EFKEGFDLVLAADVIYEEKAIGPLLSTVT--ATLRKGQ---------------------------------------------------------DALFLLSYARRNVSIDRVLAAASSMGLTCEVDDKFSCSAEGEHVYRMRLQRKEEG 272
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI17_HYAAE) HSP 1 Score: 111 bits (278), Expect = 1.260e-23 Identity = 100/330 (30.30%), Postives = 135/330 (40.91%), Query Frame = 1
Query: 61 MDVKERTHEFSFTFG---DGGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGVLASKLCTGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADGGDAASAAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGERSDNEHRDHCHSASPAAVGEEEQQPPQXXSPEPGPSSSLRCQASSPSAPPSLSPAPVESTFLLAFARRNISIERVLEEAENLGLAWRVPDDFEPASASENIYLMSL 1041
+D++ + F F FG +GG+ + I L G+ ++GQTL STGLT+WRA ++ +M+EHR FAGK V+ELG+GLGL G+LAS L T VVITDG D+ + + + N V +V KL WG L+ VND+ FD V+ ADVIYE+E V+ L T +L+ PG RC S FLLA+ +RN+SI+ VLE A + G W P E IY L
Sbjct: 75 LDIEPKEDSFEFKFGSTENGGEAAPIFIRLNGLRRDIGQTLQSTGLTLWRAGDFLSSYMYEHRGRFAGKSVIELGSGLGLIGILASYL-TDVQVVITDGDDDTIELLVANCQLNKVEE--------------------------------RVQCRKLLWG---VDLDH-----------VNDK--------FDIVLGADVIYEQEHVASLFETAKHLLK-------------------------------------PG-----RCSVDG--------SCKAASEFLLAYTKRNVSIDYVLETATSFGFEWEEP------LTDEGIYTFRL 293
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Lysine (methyltransferase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A833WMX4_PHYIN) HSP 1 Score: 110 bits (275), Expect = 1.770e-23 Identity = 100/329 (30.40%), Postives = 140/329 (42.55%), Query Frame = 1
Query: 61 MDVKERTHEFSFTFGDGGDDE--QVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGVLASKLCTGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADGGDAASAAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGERSDNEHRDHCHSASPAAVGEEEQQPPQXXSPEPGPSSSLRCQASSPSAPPSLSPAPVESTFLLAFARRNISIERVLEEAENLGLAWRVPDDFEPASASENIYLMSL 1041
+D++ + F F FG GD+E ++ I L G+ ++GQTL STGLT+WRA ++ +M++ R FAGK ++ELG+GLGL G+LAS L T VVITDG D+ + LV N C L G G +V KL WG D++ +D+ FD V+ AD+IYE+E V L T +L+ G RS + AA S FLLA+ +RN+SI+ VL+ A+ G W P + E IY L
Sbjct: 48 LDIEPKEDSFEFKFGKNGDEEDAEITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSEYMYQDRGRFAGKSIIELGSGLGLIGILASYL-TDKKVVITDGDDDTIEL--------LVAN-CKLN-----------------------GVGDRVECRKLLWG-----------------VDLHQIEDK-----FDVVLGADIIYEQEHVVSLFKTAKYLLK--PGRRS-------VGNGGKAA-----------------------------------------SEFLLAYTKRNVSIDYVLDTAKGFGFEWEEPTN------DEGIYTFRL 265
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF07_9STRA) HSP 1 Score: 108 bits (271), Expect = 6.100e-23 Identity = 100/330 (30.30%), Postives = 136/330 (41.21%), Query Frame = 1
Query: 61 MDVKERTHEFSFTFG--DGGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGVLASKLCTGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADGGDAASAAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGERSDNEHRDHCHSASPAAVGEEEQQPPQXXSPEPGPSSSLRCQASSPSAPPSLSPAPVESTFLLAFARRNISIERVLEEAENLGLAWRVPDDFEPASASENIYLMSLR 1044
+D++ + F F FG D +D +V I L G+ ++GQTL STGLT+WRA ++ +M+ +R F GK VVELG+GLGLCG+LAS L T VVITDG D+ + LV N C L N+ AD +V KL WG ++ FD V+ AD+IYE+E V L T +LR G S AA S FLLA+ +RN+SI+ VL+ A + G W P + E +Y L+
Sbjct: 47 LDIEPKEDSFVFKFGKTDDAEDAEVTIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMYANRATFVGKSVVELGSGLGLCGILASYL-TDKRVVITDGDDDTVEL--------LVAN-CKL---------NDVAD--------------KVECRKLLWGVDLEQIQHK----------------------FDIVLGADIIYEQEHVVSLFQTAQYLLR--PGHTS-------VEGGGQAA-----------------------------------------SVFLLAYTKRNVSIDYVLDTATSFGFEWEEP------TTDEGVYTYRLK 265
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YRN5_PHYSP) HSP 1 Score: 107 bits (266), Expect = 2.850e-22 Identity = 96/329 (29.18%), Postives = 137/329 (41.64%), Query Frame = 1
Query: 61 MDVKERTHEFSFTFGD--GGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGVLASKLCTGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADGGDAASAAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGERSDNEHRDHCHSASPAAVGEEEQQPPQXXSPEPGPSSSLRCQASSPSAPPSLSPAPVESTFLLAFARRNISIERVLEEAENLGLAWRVPDDFEPASASENIYLMSL 1041
+DV+ R F F FG G D ++ I L G+ ++GQTL STGLT+WRA ++ FM+++R FAGK V+ELG+GLGL G+LAS L T V+ITDG D+ + + + N V + +V +KL WG D++ D+ FD ++ AD+IYE+E V L T +L+ G RS + AA S FLLA+ +RN+SI+ VL A++ G W P + E IY L
Sbjct: 48 LDVEPREDSFEFKFGQTQDGADAEITIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDFMYQNRGRFAGKSVIELGSGLGLIGILASYL-TDEQVLITDGDDDTIELLVANCKLNEVED--------------------------------RVQCQKLLWG-----------------VDLDKIQDK-----FDIILGADIIYEQEHVVSLFETAKYLLK--PGRRSGED-------GGKAA-----------------------------------------SEFLLAYTKRNVSIDYVLNTAKSFGFEWEEPTN------DEGIYTYRL 265
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MJ79_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.740e-22 Identity = 96/332 (28.92%), Postives = 136/332 (40.96%), Query Frame = 1
Query: 61 MDVKERTHEFSFTFGDGGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGVLASKLC---TGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADGGDAASAAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGERSDNEHRDHCHSASPAAVGEEEQQPPQXXSPEPGPSSSLRCQASSPSAPPSLSPAPVESTFLLAFARRNISIERVLEEAENLGLAWRVPDDF-EPASASENIYLMSLR 1044
++K+R F ++ + + L G+ ELGQTL STGLT+WRAA+ + +F+ ++ +F GK + ELGAGLGL VL KL +GG++VITD GDE T + L N V N C + L WGE+ FL + D+ F+ V+AADVIYE+ V PLL TV ILR + F+LAFARRN+SI++V AE GL WR+ D+ E + E ++ + +
Sbjct: 52 FEIKDRDDIFKMSYASKDGERKTEFELKGIKKELGQTLDSTGLTIWRAAEHLCQFIIDNPPFFRGKTICELGAGLGLVAVLIEKLGYVESGGSLVITD-GDEPT---LQLLIENKVDNECFFESS------------------------------YLYWGENEDFL-----------SSYPDK--------FEVVIAADVIYEDCQVEPLLDTVAAILR-------------------------------------------------------------PDGEFILAFARRNVSIDKVHRAAEQRGLEWRIVDEHAEGVAGVEPVFAYTWK 269
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTL6_BRELC) HSP 1 Score: 111 bits (277), Expect = 9.390e-22 Identity = 97/329 (29.48%), Postives = 140/329 (42.55%), Query Frame = 1
Query: 61 MDVKERTHEFSFTFGDGGD--DEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGVLASKLCTGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADGGDAASAAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGERSDNEHRDHCHSASPAAVGEEEQQPPQXXSPEPGPSSSLRCQASSPSAPPSLSPAPVESTFLLAFARRNISIERVLEEAENLGLAWRVPDDFEPASASENIYLMSL 1041
+D++ + F F F GD D ++ I L G+ ++GQTL STGLT+WRA M+ FM++ R F GK ++ELG+GLGL +LAS L T VV TDG D+ + L+R +C L N +G +V KL WG ++++ DD+ FD V+ ADVIYE+E V L T +++ PS LS + + S FLLA+ +RN+SI+ VL+ A+N G W+ P + E IY L
Sbjct: 770 LDIEPKEDSFEFKFCKNGDKADAEIIIRLNGLRRDIGQTLQSTGLTLWRAGDFMSEFMYQDRSRFTGKSIIELGSGLGLISILASHL-TNKQVVATDGDDDTIE---------LLRANCKL----------NGVEG-------------RVQCRKLLWG-----------------VNLDEFDDK-----FDIVLGADVIYEQEHVVSLFKTAKHLMK--------------------------------------------------PSYQSRLSVSKIASEFLLAYTKRNVSIDYVLDTAKNFGFEWKSPIN------DEGIYTFYL 987
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Match: Uncharacterized (protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VEV1_9STRA) HSP 1 Score: 105 bits (262), Expect = 9.760e-22 Identity = 96/327 (29.36%), Postives = 137/327 (41.90%), Query Frame = 1
Query: 61 MDVKERTHEFSFTFGDGGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQEMARFMWEHRRWFAGKRVVELGAGLGLCGVLASKLCTGGAVVITDGGDEFTDSAMDALRTNLVRNSCNLLAQSPARNGNNAADGGDAASAAAAGSGAQVALEKLTWGEHGAFLERNGGGCDRTAADVNDRDDQEGRGGFDFVVAADVIYEEEGVSPLLHTVVDILRLRAGERSDNEHRDHCHSASPAAVGEEEQQPPQXXSPEPGPSSSLRCQASSPSAPPSLSPAPVESTFLLAFARRNISIERVLEEAENLGLAWRVPDDFEPASASENIYLMSL 1041
+D++ + F F FG + ++ I L G+ ++GQTL STGLT+WRA ++ +M ++R FAGK ++ELG+GLGL G+LAS L T VVITDG D+ + L+ +C L N D +V KL WG D++ +D+ FD V+ AD+IYE+E V L T +L+ R SA AA S FLLA+ +RN+SI+ VL+ A+N G W P + E IY L
Sbjct: 50 LDIEPKEDSFEFKFGTSKGEAEIIIRLNGLRRDIGQTLQSTGLTLWRAGDFLSDYMSQNRGRFAGKSIIELGSGLGLVGILASYL-TDQHVVITDGDDDTIE---------LLTANCQL---------NKVED--------------RVQCRKLLWG-----------------IDLDQIEDK-----FDIVLGADIIYEQEHVVSLFETAKYLLKPG---------RQLVESADKAA-----------------------------------------SEFLLAYTKRNVSIDYVLDTAKNFGFEWDEPIN------DEGIYTFRL 265 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8919.17019.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8919.17019.1 >prot_E_fasciculatus_S2_contig8919.17019.1 ID=prot_E_fasciculatus_S2_contig8919.17019.1|Name=mRNA_E_fasciculatus_S2_contig8919.17019.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=329bp MDVKERTHEFSFTFGDGGDDEQVCIALAGVNPELGQTLASTGLTVWRAAQback to top mRNA from alignment at E_fasciculatus_S2_contig8919:1330..5354+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8919.17019.1 ID=mRNA_E_fasciculatus_S2_contig8919.17019.1|Name=mRNA_E_fasciculatus_S2_contig8919.17019.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4025bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8919:1330..5354+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8919:1330..5354+ >mRNA_E_fasciculatus_S2_contig8919.17019.1 ID=mRNA_E_fasciculatus_S2_contig8919.17019.1|Name=mRNA_E_fasciculatus_S2_contig8919.17019.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=987bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8919:1330..5354+ (Ectocarpus fasciculatus EfasUO2)back to top |