mRNA_E_fasciculatus_S2_contig8910.17013.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H (dehydrogenase (Quinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF8_ECTSI) HSP 1 Score: 498 bits (1283), Expect = 2.270e-175 Identity = 243/252 (96.43%), Postives = 245/252 (97.22%), Query Frame = 2
Query: 68 MSGPAASVSRRQPLPSLLAGAMRALNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 823
MSGPAASVSRRQPL SLLAGAMRALNRVTSFVPPPPS KDGV+EKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVK HVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEK +PKTGFISRLTNIRK VGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF
Sbjct: 1 MSGPAASVSRRQPLSSLLAGAMRALNRVTSFVPPPPSGKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRK---VGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 249
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H (dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJZ3_9STRA) HSP 1 Score: 248 bits (632), Expect = 1.040e-76 Identity = 119/238 (50.00%), Postives = 166/238 (69.75%), Query Frame = 2
Query: 101 QPLPSLLAGAMRALNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSF 814
+PL SL ALN+ + PP + DG +++++++ HP + S++ AL +AV +LKD GH VRV +LY E F+AAL +E R +MTA+R+G +A V +HV+ L+W GLV YPTWWY+ PAILKGW DR L PG FD+P+G NP TG ISRLTNI++ +G+V+T+GN + +V+YVGDPGRR++SRGLR + HP+C++LW GL+ VE C + RSAFLE V + F
Sbjct: 15 RPLRSLPGPFSLALNKCSCHFPPA-RNADGGEQRVLLLYAHPVHEGSSYSCALRDAVVSALKDRGHDVRVADLYAEGFEAALSAEELRTYMTAYREGALAPAVAAHVESLRWAQGLVFVYPTWWYTPPAILKGWFDRCLCPGATFDMPDGTTPTNPNTGVISRLTNIKR---IGVVSTYGNQWQHVQYVGDPGRRLISRGLRAICHPDCSVLWLGLHGVETCAQERRSAFLEHVRQEF 248
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Nad (h dehydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIP7_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.100e-57 Identity = 104/245 (42.45%), Postives = 143/245 (58.37%), Query Frame = 2
Query: 104 PLPSLLAGAMRALNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRD--GQVAEDVKS---HVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 823
PL LA A NR TSF+PPPP +++++ HP G SF A E SL++AGH+V+ +LY+E FQ + + R +M D + D + ++D L+WC L+ YPTWWY+ PAILKGW+DRT +P AF LP G + L NI+K VG+VTT+G+S+ +RYVGDPGRRI++RGLRPLF +CTLLW G+Y + +R FL +V R+F
Sbjct: 15 PLSRFLASAA---NRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTS-SFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKK---VGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIU4_9EUKA) HSP 1 Score: 172 bits (437), Expect = 1.030e-47 Identity = 91/231 (39.39%), Postives = 136/231 (58.87%), Query Frame = 2
Query: 140 LNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEH-RGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGV--AFDLP-NGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRD 820
LN++TS VPPPP ++ K I+++ HP S++ AL +AV + GH++R LY E FQ+A+ E + F A + ++ DV+SH+ DL+W +V YPTWW++ PA+LKG+ DRTL+PG A+D P +G E + G + LTNI++ + V+T+G GD GR +S +RP+F P+CT LW GLY ++ C +DRS F V + RD
Sbjct: 20 LNKLTSHVPPPPREEGKCKRHILLIHAHPRAD--SYSTALADAVHEGAVAGGHELRRRTLYAEGFQSAMTDSERGKYFDVASGESRIQGDVRSHLADLRWADSIVFVYPTWWFNMPAMLKGYFDRTLVPGPGGAWDFPGSGGEPAS--NGLVPYLTNIKR---IAAVSTYGAPRHITFLAGDNGRNTISTAIRPIFDPQCTCLWLGLYSMDDCTKEDRSRFAVRVRETIRD 243
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H-dependent (oxidoreductase n=1 Tax=Roseibium aestuarii TaxID=2600299 RepID=UPI00122F4783) HSP 1 Score: 169 bits (427), Expect = 6.890e-47 Identity = 84/208 (40.38%), Postives = 121/208 (58.17%), Query Frame = 2
Query: 200 KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 823
K +VV HP + SF +L + V ++L+DAGH +RV +LY E FQ + E RG+ F + Q VK HV+D+ WC L+ YPTWWY PA+LKGWLDR +P V F++P+ PK + +IRK +G+VTT G S+W + +G+PGR+ + RG+R L HP C L+ Y ++ PQ R +L V + + F
Sbjct: 2 KTLVVYCHPC--EESFNASLRDTVLETLRDAGHAIRVRDLYGEAFQPVMSAAERRGYHDEFDNVQ---PVKDHVEDILWCESLIFVYPTWWYGLPAMLKGWLDRVWVPHVTFEMPSETRSARPK------MQHIRK---LGVVTTCGASWWLSKVIGEPGRKTLLRGMRTLCHPACKTLYMAHYKMDSSTPQSRETYLAKVRQRLKSF 195
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J3Q7_9EUKA) HSP 1 Score: 170 bits (430), Expect = 9.280e-47 Identity = 92/225 (40.89%), Postives = 132/225 (58.67%), Query Frame = 2
Query: 140 LNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRG--FMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGV--AFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDV 802
LNR+TS VPPPP+++ +I+++ HP SF++AL +AV+ D GH++R +LY E FQ AL E RG F A ++A DV+S +DDL+W LV YPTWW++ PA+LKG+ DR L+PG A+D P + G LTN+++ V V+T+G GD GR +S +RPLF P+CT LW GLY ++ C ++R+ F V
Sbjct: 14 LNRLTSHVPPPPAEEGSGPRRILLIHAHPRAD--SFSMALADAVQAGAVDGGHELRRRSLYAENFQPALTSSE-RGVYFDGAGGAARLASDVRSQLDDLRWADSLVFVYPTWWFNLPAMLKGYFDRVLVPGPEGAWDFPASGRSL-AANGLAPNLTNVKR---VCAVSTYGAPRHIAFLAGDNGRNTISTAIRPLFDPQCTCLWLGLYSMDACSREERTQFAAHV 231
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H (dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D2I0_EMIHU) HSP 1 Score: 164 bits (416), Expect = 1.420e-44 Identity = 88/239 (36.82%), Postives = 138/239 (57.74%), Query Frame = 2
Query: 140 LNRVTSFVPPPPSDKDGV-KEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFR--DGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGV--------AFDLPNGVEKINPKTG-FISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRD 820
LN VT+ VPPPP D V K KI++V HP + S++ AL +AV K+ GH +R +LY+E+F + E ++ F ++A DV+SH+DDL+W +V YPTWW++ PA+LKG++DR ++P AF N K + +G + LTN+++ V ++T+G+ + GD GR ++ G+R LF P CT+LW GLY ++ C + R+ F++ V + RD
Sbjct: 14 LNWVTTQVPPPPRSPDDVEKRKILLVHAHP--RTDSYSHALADAVEAGAKEGGHTIRRRDLYKERFSPVMTAAERGAYLRDFDMVPKRLASDVRSHLDDLRWADSVVFVYPTWWFNVPAMLKGYIDRVMVPATPGSGQGAWAFPDSNIQGKASIGSGGLVGHLTNVKR---VAGISTYGSERYMGLLAGDNGRNMIGTGVRALFDPSCTVLWMGLYSLDFCSDEQRADFIDKVRETIRD 247
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Flavodoxin (family protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VDW8_9HYPH) HSP 1 Score: 160 bits (406), Expect = 8.650e-44 Identity = 82/198 (41.41%), Postives = 116/198 (58.59%), Query Frame = 2
Query: 200 KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFL 793
K++VV HP + SF AL + V D+LK GH VR+T+LY E F LG QE R + T +G+ V H+ ++QW L+ +PTWWY PA+LKGWLDR +PGV+F +P G I P LTN++ VG +TT G+ +W ++ VG+P RR + RG+R HP C LW Y ++ P+ R ++L
Sbjct: 2 KVLVVYSHPVPE--SFCAALRDTVVDALKAKGHDVRLTDLYAENFDPRLGCQERRDYHT---EGKNLTYVPEHIANIQWAEALIFVFPTWWYGLPAMLKGWLDRVFVPGVSFTMPKGQMPIMPA------LTNVK---LVGGITTCGSPWWWMKIVGEPHRRTLLRGIRGSCHPRCKTLWMAHYRMDSSTPESRKSYL 185
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Hypothetical (protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VN59_9CRYP) HSP 1 Score: 159 bits (403), Expect = 1.190e-42 Identity = 84/241 (34.85%), Postives = 136/241 (56.43%), Query Frame = 2
Query: 140 LNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGF-----MTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLP---NGVEKINP------KTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRD 820
LN ++S+VP PP + +GVK +I++V HP D SF+ +L +A+ + + GH+ + ++Y+ F + ++ +G+ A ++ + DV+ + L+WC +V CYPTWW + PA +KG+ DRTL+PG + P G + P TG + RLTNI++ V V+T+G S V GD GR ++ +RPLF +CT W GLY+++ P+ + FL +V R RD
Sbjct: 14 LNMLSSYVPAPPRE-EGVKRRILLVHAHP--VDESFSCSLAKAIEEGAAEGGHEFKKIDIYRSGFNPIMSAKDRKGYYDNVDFDASKEAALTSDVRGAIAALRWCDSVVFCYPTWWMNTPAAMKGFFDRTLIPGSTWTFPPKPEGSVSLVPGFMNSGATGLVPRLTNIKR---VYGVSTYGASQSIVTVAGDNGRNMICTAIRPLFARDCTCGWAGLYNMDFVSPEGKKEFLANVKRIIRD 248
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H-dependent (oxidoreductase n=1 Tax=Roseibium limicola TaxID=2816037 RepID=UPI001A8F307D) HSP 1 Score: 157 bits (398), Expect = 1.300e-42 Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 2
Query: 200 KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 823
+ +VV HP + SF AL + V +LK AGH+VR+ +LY+E FQ + +E RG+ +G VK+HVDD+ WC L+ YPTWWY PA+LKGWLDR +P V F +P + P I RL G+VTT G S+W + VG+PGR+ + RG+R L HP L+ Y ++ + R +L V R + F
Sbjct: 2 RALVVYCHPC--EESFNAALRDKVVATLKSAGHEVRLRDLYKEGFQPVMSAEERRGYHD---EGDNVVPVKAHVDDILWCEMLIFVYPTWWYGLPAMLKGWLDRVWVPHVTFQMPTADRGMRPNMQHIVRL---------GVVTTCGASWWLSKLVGEPGRKTLMRGMRALCHPRGKTLYMAHYKMDSSTVESRETYLAKVERRLKSF 195 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8910.17013.1 >prot_E_fasciculatus_S2_contig8910.17013.1 ID=prot_E_fasciculatus_S2_contig8910.17013.1|Name=mRNA_E_fasciculatus_S2_contig8910.17013.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=253bp MSGPAASVSRRQPLPSLLAGAMRALNRVTSFVPPPPSDKDGVKEKIVVVQback to top mRNA from alignment at E_fasciculatus_S2_contig8910:680..3968- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8910.17013.1 ID=mRNA_E_fasciculatus_S2_contig8910.17013.1|Name=mRNA_E_fasciculatus_S2_contig8910.17013.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3289bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8910:680..3968- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8910:680..3968- >mRNA_E_fasciculatus_S2_contig8910.17013.1 ID=mRNA_E_fasciculatus_S2_contig8910.17013.1|Name=mRNA_E_fasciculatus_S2_contig8910.17013.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=759bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8910:680..3968- (Ectocarpus fasciculatus EfasUO2)back to top |