mRNA_E_fasciculatus_S2_contig8910.17013.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8910.17013.1
Unique NamemRNA_E_fasciculatus_S2_contig8910.17013.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H (dehydrogenase (Quinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF8_ECTSI)

HSP 1 Score: 498 bits (1283), Expect = 2.270e-175
Identity = 243/252 (96.43%), Postives = 245/252 (97.22%), Query Frame = 2
Query:   68 MSGPAASVSRRQPLPSLLAGAMRALNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 823
            MSGPAASVSRRQPL SLLAGAMRALNRVTSFVPPPPS KDGV+EKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVK HVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEK +PKTGFISRLTNIRK   VGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF
Sbjct:    1 MSGPAASVSRRQPLSSLLAGAMRALNRVTSFVPPPPSGKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRK---VGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 249          
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H (dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJZ3_9STRA)

HSP 1 Score: 248 bits (632), Expect = 1.040e-76
Identity = 119/238 (50.00%), Postives = 166/238 (69.75%), Query Frame = 2
Query:  101 QPLPSLLAGAMRALNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSF 814
            +PL SL      ALN+ +   PP   + DG +++++++  HP  +  S++ AL +AV  +LKD GH VRV +LY E F+AAL  +E R +MTA+R+G +A  V +HV+ L+W  GLV  YPTWWY+ PAILKGW DR L PG  FD+P+G    NP TG ISRLTNI++   +G+V+T+GN + +V+YVGDPGRR++SRGLR + HP+C++LW GL+ VE C  + RSAFLE V + F
Sbjct:   15 RPLRSLPGPFSLALNKCSCHFPPA-RNADGGEQRVLLLYAHPVHEGSSYSCALRDAVVSALKDRGHDVRVADLYAEGFEAALSAEELRTYMTAYREGALAPAVAAHVESLRWAQGLVFVYPTWWYTPPAILKGWFDRCLCPGATFDMPDGTTPTNPNTGVISRLTNIKR---IGVVSTYGNQWQHVQYVGDPGRRLISRGLRAICHPDCSVLWLGLHGVETCAQERRSAFLEHVRQEF 248          
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Nad (h dehydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIP7_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.100e-57
Identity = 104/245 (42.45%), Postives = 143/245 (58.37%), Query Frame = 2
Query:  104 PLPSLLAGAMRALNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRD--GQVAEDVKS---HVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 823
            PL   LA A    NR TSF+PPPP        +++++  HP G   SF  A  E    SL++AGH+V+  +LY+E FQ  +   + R +M    D   +   D  +   ++D L+WC  L+  YPTWWY+ PAILKGW+DRT +P  AF LP          G +  L NI+K   VG+VTT+G+S+  +RYVGDPGRRI++RGLRPLF  +CTLLW G+Y  +     +R  FL +V    R+F
Sbjct:   15 PLSRFLASAA---NRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTS-SFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKK---VGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252          
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIU4_9EUKA)

HSP 1 Score: 172 bits (437), Expect = 1.030e-47
Identity = 91/231 (39.39%), Postives = 136/231 (58.87%), Query Frame = 2
Query:  140 LNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEH-RGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGV--AFDLP-NGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRD 820
            LN++TS VPPPP ++   K  I+++  HP     S++ AL +AV +     GH++R   LY E FQ+A+   E  + F  A  + ++  DV+SH+ DL+W   +V  YPTWW++ PA+LKG+ DRTL+PG   A+D P +G E  +   G +  LTNI++   +  V+T+G         GD GR  +S  +RP+F P+CT LW GLY ++ C  +DRS F   V  + RD
Sbjct:   20 LNKLTSHVPPPPREEGKCKRHILLIHAHPRAD--SYSTALADAVHEGAVAGGHELRRRTLYAEGFQSAMTDSERGKYFDVASGESRIQGDVRSHLADLRWADSIVFVYPTWWFNMPAMLKGYFDRTLVPGPGGAWDFPGSGGEPAS--NGLVPYLTNIKR---IAAVSTYGAPRHITFLAGDNGRNTISTAIRPIFDPQCTCLWLGLYSMDDCTKEDRSRFAVRVRETIRD 243          
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H-dependent (oxidoreductase n=1 Tax=Roseibium aestuarii TaxID=2600299 RepID=UPI00122F4783)

HSP 1 Score: 169 bits (427), Expect = 6.890e-47
Identity = 84/208 (40.38%), Postives = 121/208 (58.17%), Query Frame = 2
Query:  200 KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 823
            K +VV  HP   + SF  +L + V ++L+DAGH +RV +LY E FQ  +   E RG+   F + Q    VK HV+D+ WC  L+  YPTWWY  PA+LKGWLDR  +P V F++P+      PK      + +IRK   +G+VTT G S+W  + +G+PGR+ + RG+R L HP C  L+   Y ++   PQ R  +L  V +  + F
Sbjct:    2 KTLVVYCHPC--EESFNASLRDTVLETLRDAGHAIRVRDLYGEAFQPVMSAAERRGYHDEFDNVQ---PVKDHVEDILWCESLIFVYPTWWYGLPAMLKGWLDRVWVPHVTFEMPSETRSARPK------MQHIRK---LGVVTTCGASWWLSKVIGEPGRKTLLRGMRTLCHPACKTLYMAHYKMDSSTPQSRETYLAKVRQRLKSF 195          
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J3Q7_9EUKA)

HSP 1 Score: 170 bits (430), Expect = 9.280e-47
Identity = 92/225 (40.89%), Postives = 132/225 (58.67%), Query Frame = 2
Query:  140 LNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRG--FMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGV--AFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDV 802
            LNR+TS VPPPP+++     +I+++  HP     SF++AL +AV+    D GH++R  +LY E FQ AL   E RG  F  A    ++A DV+S +DDL+W   LV  YPTWW++ PA+LKG+ DR L+PG   A+D P     +    G    LTN+++   V  V+T+G         GD GR  +S  +RPLF P+CT LW GLY ++ C  ++R+ F   V
Sbjct:   14 LNRLTSHVPPPPAEEGSGPRRILLIHAHPRAD--SFSMALADAVQAGAVDGGHELRRRSLYAENFQPALTSSE-RGVYFDGAGGAARLASDVRSQLDDLRWADSLVFVYPTWWFNLPAMLKGYFDRVLVPGPEGAWDFPASGRSL-AANGLAPNLTNVKR---VCAVSTYGAPRHIAFLAGDNGRNTISTAIRPLFDPQCTCLWLGLYSMDACSREERTQFAAHV 231          
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H (dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D2I0_EMIHU)

HSP 1 Score: 164 bits (416), Expect = 1.420e-44
Identity = 88/239 (36.82%), Postives = 138/239 (57.74%), Query Frame = 2
Query:  140 LNRVTSFVPPPPSDKDGV-KEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFR--DGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGV--------AFDLPNGVEKINPKTG-FISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRD 820
            LN VT+ VPPPP   D V K KI++V  HP  +  S++ AL +AV    K+ GH +R  +LY+E+F   +   E   ++  F     ++A DV+SH+DDL+W   +V  YPTWW++ PA+LKG++DR ++P          AF   N   K +  +G  +  LTN+++   V  ++T+G+  +     GD GR ++  G+R LF P CT+LW GLY ++ C  + R+ F++ V  + RD
Sbjct:   14 LNWVTTQVPPPPRSPDDVEKRKILLVHAHP--RTDSYSHALADAVEAGAKEGGHTIRRRDLYKERFSPVMTAAERGAYLRDFDMVPKRLASDVRSHLDDLRWADSVVFVYPTWWFNVPAMLKGYIDRVMVPATPGSGQGAWAFPDSNIQGKASIGSGGLVGHLTNVKR---VAGISTYGSERYMGLLAGDNGRNMIGTGVRALFDPSCTVLWMGLYSLDFCSDEQRADFIDKVRETIRD 247          
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Flavodoxin (family protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VDW8_9HYPH)

HSP 1 Score: 160 bits (406), Expect = 8.650e-44
Identity = 82/198 (41.41%), Postives = 116/198 (58.59%), Query Frame = 2
Query:  200 KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFL 793
            K++VV  HP  +  SF  AL + V D+LK  GH VR+T+LY E F   LG QE R + T   +G+    V  H+ ++QW   L+  +PTWWY  PA+LKGWLDR  +PGV+F +P G   I P       LTN++    VG +TT G+ +W ++ VG+P RR + RG+R   HP C  LW   Y ++   P+ R ++L
Sbjct:    2 KVLVVYSHPVPE--SFCAALRDTVVDALKAKGHDVRLTDLYAENFDPRLGCQERRDYHT---EGKNLTYVPEHIANIQWAEALIFVFPTWWYGLPAMLKGWLDRVFVPGVSFTMPKGQMPIMPA------LTNVK---LVGGITTCGSPWWWMKIVGEPHRRTLLRGIRGSCHPRCKTLWMAHYRMDSSTPESRKSYL 185          
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: Hypothetical (protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0VN59_9CRYP)

HSP 1 Score: 159 bits (403), Expect = 1.190e-42
Identity = 84/241 (34.85%), Postives = 136/241 (56.43%), Query Frame = 2
Query:  140 LNRVTSFVPPPPSDKDGVKEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGF-----MTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLP---NGVEKINP------KTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRD 820
            LN ++S+VP PP + +GVK +I++V  HP   D SF+ +L +A+ +   + GH+ +  ++Y+  F   +  ++ +G+       A ++  +  DV+  +  L+WC  +V CYPTWW + PA +KG+ DRTL+PG  +  P    G   + P       TG + RLTNI++   V  V+T+G S   V   GD GR ++   +RPLF  +CT  W GLY+++   P+ +  FL +V R  RD
Sbjct:   14 LNMLSSYVPAPPRE-EGVKRRILLVHAHP--VDESFSCSLAKAIEEGAAEGGHEFKKIDIYRSGFNPIMSAKDRKGYYDNVDFDASKEAALTSDVRGAIAALRWCDSVVFCYPTWWMNTPAAMKGFFDRTLIPGSTWTFPPKPEGSVSLVPGFMNSGATGLVPRLTNIKR---VYGVSTYGASQSIVTVAGDNGRNMICTAIRPLFARDCTCGWAGLYNMDFVSPEGKKEFLANVKRIIRD 248          
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Match: NAD(P)H-dependent (oxidoreductase n=1 Tax=Roseibium limicola TaxID=2816037 RepID=UPI001A8F307D)

HSP 1 Score: 157 bits (398), Expect = 1.300e-42
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 2
Query:  200 KIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 823
            + +VV  HP   + SF  AL + V  +LK AGH+VR+ +LY+E FQ  +  +E RG+     +G     VK+HVDD+ WC  L+  YPTWWY  PA+LKGWLDR  +P V F +P     + P    I RL         G+VTT G S+W  + VG+PGR+ + RG+R L HP    L+   Y ++    + R  +L  V R  + F
Sbjct:    2 RALVVYCHPC--EESFNAALRDKVVATLKSAGHEVRLRDLYKEGFQPVMSAEERRGYHD---EGDNVVPVKAHVDDILWCEMLIFVYPTWWYGLPAMLKGWLDRVWVPHVTFQMPTADRGMRPNMQHIVRL---------GVVTTCGASWWLSKLVGEPGRKTLMRGMRALCHPRGKTLYMAHYKMDSSTVESRETYLAKVERRLKSF 195          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8910.17013.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
NAD(P)H2.270e-17596.43dehydrogenase (Quinone) n=1 Tax=Ectocarpus silicul... [more]
NAD(P)H1.040e-7650.00dehydrogenase n=1 Tax=Tribonema minus TaxID=303371... [more]
Nad2.100e-5742.45h dehydrogenase n=1 Tax=Nannochloropsis gaditana T... [more]
Hypothetical1.030e-4739.39protein n=1 Tax=Coccolithus braarudii TaxID=221442... [more]
NAD(P)H-dependent6.890e-4740.38oxidoreductase n=1 Tax=Roseibium aestuarii TaxID=2... [more]
Hypothetical9.280e-4740.89protein n=1 Tax=Calcidiscus leptoporus TaxID=12754... [more]
NAD(P)H1.420e-4436.82dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903... [more]
Flavodoxin8.650e-4441.41family protein n=1 Tax=Parvibaculum sedimenti TaxI... [more]
Hypothetical1.190e-4234.85protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S... [more]
NAD(P)H-dependent1.300e-4239.42oxidoreductase n=1 Tax=Roseibium limicola TaxID=28... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8910contigE_fasciculatus_S2_contig8910:680..3968 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score501.9
Seed ortholog evalue1.7e-139
Seed eggNOG ortholog2880.D7FXF8
Model size1275
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.Flavodoxin-like fold
EggNOG OGs2S51M@2759,COG2249@1
Ec32 ortholog descriptionFlavodoxin-like fold
Ec32 orthologEc-07_003040.1
Cds size759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8910.17013.1prot_E_fasciculatus_S2_contig8910.17013.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8910 1129..3901 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842545.580069-UTR-E_fasciculatus_S2_contig8910:679..11281696842545.580069-UTR-E_fasciculatus_S2_contig8910:679..1128Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8910 680..1128 -
1696842545.6500957-UTR-E_fasciculatus_S2_contig8910:3901..39681696842545.6500957-UTR-E_fasciculatus_S2_contig8910:3901..3968Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8910 3902..3968 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842545.5944965-CDS-E_fasciculatus_S2_contig8910:1128..13381696842545.5944965-CDS-E_fasciculatus_S2_contig8910:1128..1338Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8910 1129..1338 -
1696842545.6065257-CDS-E_fasciculatus_S2_contig8910:1822..19421696842545.6065257-CDS-E_fasciculatus_S2_contig8910:1822..1942Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8910 1823..1942 -
1696842545.6177793-CDS-E_fasciculatus_S2_contig8910:2582..27851696842545.6177793-CDS-E_fasciculatus_S2_contig8910:2582..2785Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8910 2583..2785 -
1696842545.6367023-CDS-E_fasciculatus_S2_contig8910:3675..39011696842545.6367023-CDS-E_fasciculatus_S2_contig8910:3675..3901Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8910 3676..3901 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8910.17013.1

>prot_E_fasciculatus_S2_contig8910.17013.1 ID=prot_E_fasciculatus_S2_contig8910.17013.1|Name=mRNA_E_fasciculatus_S2_contig8910.17013.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=253bp
MSGPAASVSRRQPLPSLLAGAMRALNRVTSFVPPPPSDKDGVKEKIVVVQ
VHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRG
FMTAFRDGQVAEDVKSHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTL
MPGVAFDLPNGVEKINPKTGFISRLTNIRKASYVGMVTTFGNSFWNVRYV
GDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFR
DF*
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mRNA from alignment at E_fasciculatus_S2_contig8910:680..3968-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8910.17013.1 ID=mRNA_E_fasciculatus_S2_contig8910.17013.1|Name=mRNA_E_fasciculatus_S2_contig8910.17013.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3289bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8910:680..3968- (Ectocarpus fasciculatus EfasUO2)
TACCGGAGAGGAGAGGTGCTTTGTGTTGGTGTCAGCTGGTTGGTGTGCTC TCGCTCTCGGGGTTGCAATGTCGGGTCCTGCGGCGAGCGTGTCGCGTCGG CAACCCTTGCCTTCTCTTTTGGCTGGTGCTATGCGAGCGCTCAATCGGGT GACCTCCTTCGTCCCGCCGCCTCCCTCCGACAAGGACGGAGTCAAGGAGA AGATCGTGGTGGTTCAGGTCCACCCTAACGGGAAGGACCCGTCCTTCACC TTGGCCTTGGGAGAAGCCGTGCGGGACTCGCTGAAAGATGCAGGTGCGTG GGCATTCGTGGAGATTATGAACGAAATAAGCCCAGTACCCAGCCGGTTGC CCTCCACTCACCCTGTAAAAAGACTTCAACACATCCCCTTCGACTGTTAT GCATATGATTATATCTCGAACGGGTAGTCTTTCTGTGCTTTTATGTATGC ATATTTTTCCTGATAGTTATCAGCACCGCCTTGCAACTCTCTCGTGTGCT GCTTGTCCTGCGGTAGAAACAGGAGTCGGCAAATCCAACGAGAGCGGCGT TGCATCGCCACCTTGTTTGTGGCATGCTGGTTCGTGGAAGTTGTGCTTCC CGTCTCTGCCGCGCCACCGTATAGAGCAGCTTCATCAAAAGGCAAATAAC TCTACACTCTTGTGTTCCCGCGCGCGATATGTGTTAAAACGGCAACATAA CCCTGCAGTTAACAACCATCACGTAGTAGTCTACGTACACCTACGCGCTG TCGAGCAACTGCTACACTGCTATACGTACGAAATTTATTTAGCGTTGTGT CACATCGTACCAATACAGTACCCCTTTCCTCGTGGTCGGCTGCGAAACCC GGCAGGCGATCGGGCGAACCCCGTAACAAGCACCTGTCATCCGCGTTGCT ACAGTAGTAAAGCAGTTCAGTAGTTTTTGCACGATCTTGCAGCGAAGAAG CGCTGGCAATGTGTCCACGGGAAAAACATAGCCTTTGGAAGAAACTCCTG TCACTCGATGTACGTGAGCTCTGGAGATGTCATGCATGTGCGCTTCTTCT CTGCGAGTTTTCTACGCCCTCAACCTCTCGTGCGTGAGTAGTCACAATCG GTTTTCGATGGCTGCGGATAGATTCGCCCATTCCCGTCTGATTGCACACG AACGGCGATCGCACACGTACATCTCGATCGCAGGACATCAAGTGCGGGTG ACAAATCTCTACCAGGAGCAGTTCCAGGCGGCCCTGGGAGGACAGGAGCA CCGAGGGTTCATGACGGCGTTCCGCGATGGGCAGGTTGCGGAGGATGTGA AGAGCCACGTCGACGATCTCCAATGGTGCTCGGGGCTTGTGTTGTGCTAC CCTACCTGGTGGTATTCCTTCCCTGCCATTTTGAAGGTAAAGTTGCCGCC GTCAGCGTGCTGTCCTGCTGCTGCAAGGAGTAGCTCTCGAAATGCGATGG TGGACAGGGTGTCAAGGGTCATCGTGGGGATTTGCGTCGCCGACGGGAAA CGTTGTTGTTTCATGAACCCATTCCTTTGGTTCCCCGCCGTTCCGATGGC GACACGTCAAGATTACGCCTATATCTGAAGTGCACTGCTTCAGCCGCATC AAGAGCGCTGCACGTTACACGAGATGCGATCGACAACTTTCTCAAAGAAT GTCATTTACTGCGATTTGCGCACGTTTTAGGTGCTTTTCCACAGACACCA CAGGCCACCGTCTTTGTAGGTGCTGTTCTAGGTTCCAGGACAGGAGGGGT GTAAGAGAGGCAATGACCGACCATGGTGACATCAGCGCCGTGTCTTACGA GACGGGTTGTAAACGACGGCGCATTTCGTAGAGGACATGATACTGGCCCG CATTGTGAACTCATGTTGATGCCGAGGGAGGGTGATGTGCTATACTCCAA CCGCCAAGAAATTTCTTTTCACTTTACGTAGCCATCATTCCATTTTTTCC GTGGGGTGGGTCCAAGTAGCCCTCCCCCGTTTGTCTCAACCATTCCGCGG TGCCTGCGTAATTTCCCTTGCTGTAGGGCTGGCTTGACCGAACGCTCATG CCGGGGGTGGCGTTCGACCTCCCGAACGGCGTCGAGAAGATTAACCCAAA GACCGGCTTCATCAGCCGACTCACCAACATCCGAAAGGCAAGCTATGTAC CATTCGAATCAACGCGCCTAAGACCTTCTTGTAGGAGTCCCCTGCGTCTT AAGGCACGTAGCAGTCAGTCACATCGGGTTCTACATATCATGGGAGATCT GCGGAAAGGCATGACAGAAGACGTCTGCAGGCAGCGCTGGGAAAGCCATC TCTTCATCTCAAAGAATTCCAGCCGCAAGGCGTTGTTGTACAGCTCTATC TTTTTGGCGATGCCCGTATTGGGTAACCTGATCTCGGCATAGAGGTAGGT CATCGACGTGTACTGACGTTTTCGAATTATTGTTTAAAGCACCACACGAG ACCAAACATTGTGATACATGTGAAATAGGAGTTAGAATCACTAGAACGTG CCACCACACACGACGCCTCTTCATGGTGCCCTCCACCGATAACAGATCCA CGTGAACGCTACAGGTCTTTCTTTGTCGGCGTCGTCTGTTGTCTCCGCTG CTCGCTGCATTTTTTTTTCCTCTTGAGCAGGTTGGCATGGTGACCACTTT CGGGAACAGTTTTTGGAACGTGCGATACGTAGGCGACCCCGGCAGGCGAA TAGTTTCGAGAGGCCTCCGACCTCTCTTTCACCCGGAGTGCACGTTGCTG TGGAAAGGGCTTTACGACGTAGAAAAGTGCCCGCCGCAGGACAGGTCGGC GTTTTTGGAAGATGTCGGCCGGTCCTTTCGGGACTTTTAAATGTGAATTT TTGGATTCGAAGCATTACTCTCTTTCTTTTCCTCCTTTTGTGGATTTGGG CTCGATCTTGCTTTCCAGTTTTGTTGTTTTCGTGGAACGCGCTAACCGAT GTGAACAGCAGTGCCCACAGCTGTAGATGAGCGATTGCGAAGAGGCTACC CATTCGAGTCAAGCGGTGTTGAGTGAGGATAGCGATACCGTAAAGCATGG CTTGTTTTTTGTGTTTTTCTCGTGATGCTCGTCCTACGGCTGGCTGCCAG TGCGATGTGTGAGTTCAGTGTTGTTTTCATCGAACTCTGCTGTATCTCGG TACTTTCACATCATGTTCGTCGGACGACGCCTTGCCTGCACTGGTTGCGT CCAACTCGAATACCCCAGAGTATTTGGTAGGTTGTGGACGAGAAACGCGA TTTTGGTGAAATACTGGTTTTCGATCAAGCCTGTGGGAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8910:680..3968-

>mRNA_E_fasciculatus_S2_contig8910.17013.1 ID=mRNA_E_fasciculatus_S2_contig8910.17013.1|Name=mRNA_E_fasciculatus_S2_contig8910.17013.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=759bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8910:680..3968- (Ectocarpus fasciculatus EfasUO2)
ATGTCGGGTCCTGCGGCGAGCGTGTCGCGTCGGCAACCCTTGCCTTCTCT
TTTGGCTGGTGCTATGCGAGCGCTCAATCGGGTGACCTCCTTCGTCCCGC
CGCCTCCCTCCGACAAGGACGGAGTCAAGGAGAAGATCGTGGTGGTTCAG
GTCCACCCTAACGGGAAGGACCCGTCCTTCACCTTGGCCTTGGGAGAAGC
CGTGCGGGACTCGCTGAAAGATGCAGGACATCAAGTGCGGGTGACAAATC
TCTACCAGGAGCAGTTCCAGGCGGCCCTGGGAGGACAGGAGCACCGAGGG
TTCATGACGGCGTTCCGCGATGGGCAGGTTGCGGAGGATGTGAAGAGCCA
CGTCGACGATCTCCAATGGTGCTCGGGGCTTGTGTTGTGCTACCCTACCT
GGTGGTATTCCTTCCCTGCCATTTTGAAGGGCTGGCTTGACCGAACGCTC
ATGCCGGGGGTGGCGTTCGACCTCCCGAACGGCGTCGAGAAGATTAACCC
AAAGACCGGCTTCATCAGCCGACTCACCAACATCCGAAAGGCAAGCTATG
TTGGCATGGTGACCACTTTCGGGAACAGTTTTTGGAACGTGCGATACGTA
GGCGACCCCGGCAGGCGAATAGTTTCGAGAGGCCTCCGACCTCTCTTTCA
CCCGGAGTGCACGTTGCTGTGGAAAGGGCTTTACGACGTAGAAAAGTGCC
CGCCGCAGGACAGGTCGGCGTTTTTGGAAGATGTCGGCCGGTCCTTTCGG
GACTTTTAA
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