mRNA_E_fasciculatus_S2_contig8908.17010.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8908.17010.1
Unique NamemRNA_E_fasciculatus_S2_contig8908.17010.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 3.930e-138
Identity = 195/224 (87.05%), Postives = 207/224 (92.41%), Query Frame = 1
Query:  520 ESAYCSRGHQGHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEA 1191
            ES YCSRGHQ HAIALGQGM T  SHV QVFRGGTTGATDF +SVLSKSH QYSSL HQF+ KWVK GVP VRRILEVKVPADIYGKY NYK+AKGN+RRRFHGTSCS+ CNFFVDLKG+PCSS+GCNVC+ICTNGFMLQGNVGGTA+RT+ GLRYG+GLYFSSVSGKSNDYAQ SEKVGSDGKKVRCMF+ANVT GNAYLTQQVSLGQNMCPPAGHDSVVGEA
Sbjct:   44 ESDYCSRGHQAHAIALGQGMRTVTSHVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVKGGVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSLGQNMCPPAGHDSVVGEA 267          
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 7.540e-130
Identity = 186/233 (79.83%), Postives = 204/233 (87.55%), Query Frame = 1
Query:  577 MPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYALP 1275
            M   QSHV Q FRGGTTGATDF +S LSK+HPQY SL HQF+ KW+KPGVP V RILEVKVP DIY K V YK+AKGNVRRRFHGTSCS++CNFFVDLKG+PCSS+ CNVC+ICT+GF+L+ NV GTARR NY  RYG+GLYFSSVSGKSNDYAQ SEKVGSDGKKVRCMFVANVT GNAYLTQQ SLGQ+MCPPAG+DSVVGE G GL HDELV Y++EAAIPSYLIVYALP
Sbjct:    1 MAGTQSHVEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKPGVPRVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSLGQDMCPPAGYDSVVGEVGSGLIHDELVAYEDEAAIPSYLIVYALP 233          
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 5.020e-122
Identity = 210/479 (43.84%), Postives = 265/479 (55.32%), Query Frame = 1
Query:   16 MGTTASMPVLCGLPGCTRPCYDDGLVVHDYCGRTHAKQAASSGL-----------------------------------------------------VAGGRRSQTGTTCQLPGCSQPPFFDPVTNRTHDFCSKRH---AITGASKXXXXXXXXXXXXXXXXXLVSATCSVAMNPHSVVEATYVKLCPRRTYLRKWRLKTIPEVSPHPPSSPHSTHALHWRQPKESAYCSRGHQ--GHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKP---GVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYA 1269
            M   A+   LCG+P CTRPC+D G VVHD+CGRTHA++A S G+                                                      + G  +  G+TC+LPGC    F DP T+   D+CSK H   A T                       S+ C++         +            R  +L    EV+             H +      YC   H+       LG    T   +V ++F  GTTG TDF++ VLSK+HP Y SL  QF+ KWVKP   G   V +IL V+VPAD+  K   Y++  GNVRRRFHGTSCS++CNFFVDL+G+PCS +GC VCSICT+GF LQGNVGGTARRTN+GLRYG+GLYFSSVSGK+NDYA  SEK  S+G+++RCMFVANV  G A+ T + SL QN CPPAG+DSVVGE G GLN+DELVVYK+EAA+P++LIVY+
Sbjct:    1 MAVPAAPSRLCGIPECTRPCHDGGTVVHDFCGRTHAEEAVSRGIRPSLRRPHGNCHECKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQWTRSTSAGNTNAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQANTRECLRKGCTSTAWLANIEGPQYCSSRCAIDDGGQKAGSS------------RSCKLAGCSEVA-----------LYHHQTGNALDYCGEDHRVRNEQQTLGTNGDT---YVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQQNECPPAGYDSVVGEVGQGLNYDELVVYKDEAALPTHLIVYS 453          
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 1.010e-98
Identity = 191/435 (43.91%), Postives = 245/435 (56.32%), Query Frame = 1
Query:   46 CGLPGCTRPCYDDGLV--VHDYCGRTHAKQAASSGLVAGGRRS----------QTGT-TCQLPGCSQPPFFDPVTNRTHDFCSKRHAITGASKXXXXXXXXXXXXXXXXXLVSATCSVAMNPHSVVEAT--YVKLCPRR-------TYLRKWRLKTIPE-VSPHPPSSPHSTHALHWRQPKESAYCSRGHQGHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGVPL---VRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
            C L GC+R  Y D     VH++CGR HA +A ++G  +   R           + GT  C L GC +  + DPVT     +CS RH + G +                   +   CS A     V E T   +  C  R        YL    + ++P  V+P+          +H R  +E+ YC   H+  A     G P  +  V + FRGGTT A DF++SVL+  HP+Y S   QF+ KW KP V     V RI +V+VP DI  +        GNV+RRFHGTSCS+ C FFVDL+G PC    C VC+ICT+GF L+ NVG TARRTN+ LRYGDGLYFSSVSGK+NDYA+LSEK    GKKVRCMF+++VTVG A++T +  L    CPP G DSVVGE G  LN+ E+VVYK EAA+P++LIVYAL
Sbjct:   66 CKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSEC-------------IRDGCSRAA---WVDEGTGGVLDYCGSRCAGEVGMNYLVGVGVCSLPGCVNPN---------FVHPRDRQETGYCCEDHRLRATQRSLG-PNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQCPPPGFDSVVGEKGPALNYPEVVVYKEEAALPTHLIVYAL 474          
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 3.370e-83
Identity = 185/446 (41.48%), Postives = 241/446 (54.04%), Query Frame = 1
Query:   37 PVLCGLPGCTRPCYDDGLVVHDYCGRTHAKQAASSGLVAGGRRSQTGT-TCQLPGCSQPPFFDPVTNRTHDFCSKRHAITGASKXXXXXXXXXXXXXXXXXLVSATCSVAMNPHSVV----EATYV----KLCPRRTYLRK-WRLKTIPE--------------VSPHPPSSPH----STHALHWRQPKES-AYCSRGHQGHAIALGQG-MPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKP----GVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
            P  C +P CTRP +    +VH++CGRTHA +A S GL A   R       CQL GCS+P +FD  T R +             +      XXXXXXXXXXX                    ++ Y+    +LC RR      W   T                 ++ H  S       S   LH  Q  E   YCS GH+  +    +G + +++ +V  V+  GT     F +  L ++HP+  SL  QF  KWVKP    G+ +VR I  V+VPA++  K+  Y +   N+RRRFHGTSCS  CNF VD +  PC  + C++C+I   GF L  NVG TA   N+ LRYG G+YFSSVSGK+NDYA L+ K   DG K+RCMFVANV  G AY T++ +L    CPP G++SVVGE G GLN+DELVVYK EAA+P++LIVYAL
Sbjct:    7 PGSCDIPECTRPRHQRAGIVHNFCGRTHAMEAVSRGLAAKLDRPHGRCHVCQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGDWIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARLCARRGCTSTAWLANTDSRQYCSAYCFSKERLVLNKHAGSVCKLRYCSVGTLHHLQTGEDLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVGTPR---FNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVR-IFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALDDGKCPPPGYESVVGEVGQGLNYDELVVYKEEAALPTHLIVYAL 448          
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: Hypothetical (protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HUZ3_POLGL)

HSP 1 Score: 218 bits (555), Expect = 1.940e-63
Identity = 154/434 (35.48%), Postives = 206/434 (47.47%), Query Frame = 1
Query:   34 MPVLCGLPGCTRPCYDDGLVVHDYCGRTHAKQAASSGLVAGGRRSQTGTTCQLPGCSQPPFFDPVTNRTHDFCSKRHAITGASKXXXXXXXXXXXXXXXXXLVSATCSVAMNPHSVVEATYVKLCPRRTYLRKWRLKTIPEVSPHPPSSPHSTHALHWRQPKESAYCSRGH-----QGHAIALGQGMPTAQ---SHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGV-PLVRRILEVKVPADIYGKYVNY-----KQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQN----MCPPAGHDSVVGE---AGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
            M  +C L GCTRP +    VVH YCGRTHA Q     L            C L GC+Q  +FD    R HDFCSK HA                                    ++ +  +     RRT     +  ++P  +  P  +  ST  LH        +C R H     Q   + L  G P AQ     V +VF G  TG  D+ ++VL++ HP+Y  +  QFL +WV PG  P VRR+L+V+    +Y +Y  Y     +Q      RRFHGTS S +C+F +D+    C+   C VC IC  GF +     G +      LRYG G YFS  S KSNDYA  SE+  S G++ R MF+  V  G ++  +++S+  +         G+ SV  +    GG LNHDELV+Y+NEAAIPSYLIVY L
Sbjct:    1 MATMCVLQGCTRPAWIGAGVVHKYCGRTHAAQDLGWHLKEPHGYCHR---CNLEGCNQTVYFDEAAGRVHDFCSKGHA----------------------------------DEAIEDGDWQPSNKRRTANSPQQRCSLPGCAA-PRYNDQSTGHLH-------DFCGRSHALLAKQRGLVGLAAGPPIAQYLPQAVERVFGG--TGRDDYSVAVLTRQHPKYEGIKEQFLDRWVHPGPKPRVRRLLQVRNTQTVYNQYQAYLGTQVRQGYQTEHRRFHGTSLSPQCSFGIDMASTLCTQNDCAVCGICRYGFDIDRQ--GASGSLRLALRYGVGHYFSRTSSKSNDYAGASERQ-SAGQRTRLMFLCKVAPGPSFEAKEISMSDDDLAEQVHGRGYTSVEAKNTAEGGPLNHDELVIYQNEAAIPSYLIVYEL 384          
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ6_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 6.060e-63
Identity = 155/472 (32.84%), Postives = 203/472 (43.01%), Query Frame = 1
Query:   46 CGLPGCTRPCYDDGLV--VHDYCGRTHAKQAASSGLVAGGRRSQTGTT-----------------------------------------------CQLPGCSQPPFFDPVTNRTHDFCSKRHAITGASKXXXXXXXXXXXXXXXXX---LVSATCSVAMNP--------HSVVEATYVKLCPRRTYLRKWRLKTIPEVSPHPPSSPHSTHALHWRQPKE---SAYCSRGHQGHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
            C   GCTRPC  D     +H  C   ++  A S+  +  GR S   +T                                               CQL GC++    +  T   +DFCS++HA    +                      +   C+    P        H++    Y+ +C  R   +                         W  PK    S+YC R H+                V+Q   GG+ G + FR+  L +SH +Y S+  QF  KW K  VP V  I  +K+P  +  KY+ YK   GN RRRFHGTS +S C+FF   K  PCSS+ C  C+IC  GF L G       + +Y  RYG GLYFSSVSGKSNDYA  SE+   +G + R MF+ NV VG A +T+ V L  + CP  G DSVVG  G  LNHDE VVY   AAIPSY+IVY +
Sbjct:  162 CKHSGCTRPCAADAKTGRIHGVCQTHYSGAANSTTYIVAGRTSAASSTQAPARAAMGGTVGIIKISSIAQAAPXXXXXSSASGRLTRPSAVSSGQCQLDGCAKLSAINTSTGERYDFCSRQHAQQAKNSGKAGPFNGGGAFLAVPGPAVCMLLGCAKPQAPGYDHCCKDHALAARKYIPMCTLRGCAKDA-----------------------WFDPKRNQYSSYCGRAHRNEG-----------ERVLQEMTGGS-GGSGFRLQELDRSHQKYESVKTQFTSKWQKGNVPTVENIFLIKMPMGVVDKYLAYKNRVGNERRRFHGTSRASDCDFFTGSKKQPCSSRTCVACNICMVGFKLVGTT-----KKSY-ARYGRGLYFSSVSGKSNDYADGSEQ-RRNGARYRTMFLCNVAVGKAKVTEAVDLPDDQCPGKGFDSVVGNKGANLNHDETVVYDEAAAIPSYMIVYRM 591          
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 2.490e-60
Identity = 105/221 (47.51%), Postives = 143/221 (64.71%), Query Frame = 1
Query:  628 GATDFRISVLSKSHPQYSSLSHQFLIKWVKP----GVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGD--PCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
            G+++  + +L ++  +Y++L   F  +W+KP    GV  + R+  ++V  ++  K+  YK   GN+ +RFHGTSC+  CNF VD +G   PC    C+VC+IC  GF L  NV GTAR T   LRYG+G+Y +SVSGK+NDYA  S K      ++RCMFVA+V VG A+ T+   L  N CPP G+ SVVGE G GLN DE VVY  EAA+P++LIVYAL
Sbjct:   11 GSSESVLQMLEENSREYTALRGLFNARWMKPRPAKGVS-IERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLPANQCPPPGYQSVVGEVGQGLNFDEFVVYNEEAALPTHLIVYAL 230          
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: TPR (repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 2.230e-59
Identity = 112/223 (50.22%), Postives = 151/223 (67.71%), Query Frame = 1
Query:  622 TTGATDFRISVLSKSHPQYSSLSHQFLIKWVKP----GVPLVRRILEVKVPADIYGKYVNYKQ-AKGNVRRRFHGTSCSSRCNFFVDLKGD--PCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYA 1269
            + G++   + +L     +Y +L   F  +W+KP    GV +VR I  ++VP +++ K+  YK+    N+R+RFHGTSC+  CNF VD +G   PC    C+VC+IC  GF L  NV  TAR +   LRYG G+YFSSVSGK+NDYA+LS K GSDG ++RCMFVANV  G A+ T++  L Q+ CPP+G  SVVGE G  LN+DE+VVYK EAA+P++LIVYA
Sbjct:  454 SVGSSSSTLRILDDDDWEYEALCDLFKTRWLKPQPTNGVSIVR-IFSIQVPLEVHDKHELYKRMVVVNLRQRFHGTSCNDGCNFMVDPQGATAPCGLSSCSVCNICMLGFKLGKNVARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLPQSECPPSGCQSVVGEVGHALNYDEVVVYKEEAALPTHLIVYA 675          
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: Hypothetical (protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I6I7_POLGL)

HSP 1 Score: 207 bits (526), Expect = 1.850e-58
Identity = 116/257 (45.14%), Postives = 153/257 (59.53%), Query Frame = 1
Query:  529 YCSRGHQGHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKP--GVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFML--QGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGK----KVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYALP 1275
            +C + H   A A G   P   S V +V  GG+    DF + +L + HP Y+++  QFL  W K   G P V R+L+++   +I   +  Y QA GNVRRRFHGTS S  C F    +  PCS + C VC IC   F L   G   G  R T+  LRYG GLYFS+ SGKSNDYA+ SE++  + +    + RCMFV +V +G A+LT +  L Q  CPP G+D+VVGE G  LN DE+VVY   AA+PS+L+VY+LP
Sbjct:  195 FCCQDHADKARARGLLAPQDPSTVDRVLLGGSG---DFCVELLRRQHPDYAAVKQQFLSSWRKSEQGPPRVERLLKIRSALEIREAFAEYAQAVGNVRRRFHGTSQSESCTFGTHPEKAPCSDKKCRVCCICRRTFSLLHAGETFGGPRNTS-ALRYGPGLYFSATSGKSNDYAEGSERMKHEARGAQRRWRCMFVCHVAIGKAHLTTEGWLPQQQCPPPGYDAVVGEVGENLNFDEVVVYDEAAAVPSFLVVYSLP 447          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PARP3.930e-13887.05catalytic domain-containing protein n=1 Tax=Ectoca... [more]
PARP7.540e-13079.83catalytic domain-containing protein n=1 Tax=Ectoca... [more]
PARP5.020e-12243.84catalytic domain-containing protein n=1 Tax=Ectoca... [more]
PARP1.010e-9843.91catalytic domain-containing protein n=2 Tax=Ectoca... [more]
PARP3.370e-8341.48catalytic domain-containing protein n=1 Tax=Ectoca... [more]
Hypothetical1.940e-6335.48protein n=1 Tax=Polarella glacialis TaxID=89957 Re... [more]
PARP6.060e-6332.84catalytic domain-containing protein n=1 Tax=Ectoca... [more]
PARP2.490e-6047.51catalytic domain-containing protein n=1 Tax=Ectoca... [more]
TPR2.230e-5950.22repeat-containing protein n=1 Tax=Ectocarpus silic... [more]
Hypothetical1.850e-5845.14protein n=1 Tax=Polarella glacialis TaxID=89957 Re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8908contigE_fasciculatus_S2_contig8908:1713..6133 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score369.8
Seed ortholog evalue1.7e-99
Seed eggNOG ortholog2880.D8LS87
Model size1278
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs28J37@1,2S14A@2759
Ec32 ortholog descriptionPoly(ADP-ribose) polymerase, catalytic domain
Ec32 orthologEc-11_005620.1
Cds size1263
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8908.17010.1prot_E_fasciculatus_S2_contig8908.17010.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8908 1728..6133 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842545.2468035-UTR-E_fasciculatus_S2_contig8908:1712..17271696842545.2468035-UTR-E_fasciculatus_S2_contig8908:1712..1727Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8908 1713..1727 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842545.260809-CDS-E_fasciculatus_S2_contig8908:1727..19011696842545.260809-CDS-E_fasciculatus_S2_contig8908:1727..1901Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8908 1728..1901 +
1696842545.272325-CDS-E_fasciculatus_S2_contig8908:3008..31771696842545.272325-CDS-E_fasciculatus_S2_contig8908:3008..3177Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8908 3009..3177 +
1696842545.2840877-CDS-E_fasciculatus_S2_contig8908:3450..38481696842545.2840877-CDS-E_fasciculatus_S2_contig8908:3450..3848Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8908 3451..3848 +
1696842545.2954507-CDS-E_fasciculatus_S2_contig8908:4505..46221696842545.2954507-CDS-E_fasciculatus_S2_contig8908:4505..4622Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8908 4506..4622 +
1696842545.315405-CDS-E_fasciculatus_S2_contig8908:4981..51611696842545.315405-CDS-E_fasciculatus_S2_contig8908:4981..5161Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8908 4982..5161 +
1696842545.3306258-CDS-E_fasciculatus_S2_contig8908:5405..55401696842545.3306258-CDS-E_fasciculatus_S2_contig8908:5405..5540Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8908 5406..5540 +
1696842545.340965-CDS-E_fasciculatus_S2_contig8908:6043..61331696842545.340965-CDS-E_fasciculatus_S2_contig8908:6043..6133Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8908 6044..6133 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8908.17010.1

>prot_E_fasciculatus_S2_contig8908.17010.1 ID=prot_E_fasciculatus_S2_contig8908.17010.1|Name=mRNA_E_fasciculatus_S2_contig8908.17010.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=421bp
MGTTASMPVLCGLPGCTRPCYDDGLVVHDYCGRTHAKQAASSGLVAGGRR
SQTGTTCQLPGCSQPPFFDPVTNRTHDFCSKRHAITGASKCKLRGCSKNV
YRDPVTGLVSATCSVAMNPHSVVEATYVKLCPRRTYLRKWRLKTIPEVSP
HPPSSPHSTHALHWRQPKESAYCSRGHQGHAIALGQGMPTAQSHVVQVFR
GGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGVPLVRRILEVKVPA
DIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSI
CTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSD
GKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDE
LVVYKNEAAIPSYLIVYALP*
back to top

mRNA from alignment at E_fasciculatus_S2_contig8908:1713..6133+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8908.17010.1 ID=mRNA_E_fasciculatus_S2_contig8908.17010.1|Name=mRNA_E_fasciculatus_S2_contig8908.17010.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4421bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8908:1713..6133+ (Ectocarpus fasciculatus EfasUO2)
GCTGTGGCCCTCGGGATGGGCACCACGGCGAGTATGCCCGTGTTGTGCGG CCTCCCGGGGTGTACACGGCCTTGCTACGATGATGGGCTCGTCGTCCACG ACTACTGTGGGCGTACTCACGCGAAACAAGCAGCGTCCAGTGGGCTCGTC GCTGGTGGTCGTCGCTCCCAAACCGGCACCACTTGTCAAGTGAGGCTTTT GCAGGAAATACTACGGGTCAGGGCCCATGGGTTTGGGGAAATGTGCCCGT GGGCATAGGGTTAGGACCCTTGGGGTTAGAGTTAGAGTTAAGTAAGGATA GGGCTAAAGGGCATACCCAAAATGCTCACATGGTGATACGGATGAGTCCA TAGACACGTCGACGTCCACGGACGGACGTGGACACGTCCAAGGACGCCGT CCGTGAACGGCCGTGGACGCCCGTGAGTGCCCGTGGGCGTCCACGGACGT GTCCGCGTCCGTGGACATTCATGGACGCCCGTGGAGATGTTCATGGGCAC GTCCGTGGCCACCCATGGCCGTGTCCGCGAATGTCCATGGACATGTCCAT GACACATCATCCATGAAATGGTCGAAAACGAGCCTCATCGCTGGTGGTCG GCGCTAAAACGGCACGACGTGTCAACTGAGGCTCTTGCAGGACAGCTATG GGGTACAAATATCACTTCATCCGTACGTACCATACAGACTGCCATCGATA CTTTGGTAAGCAGTGTAGCAGCAAGACCTTTTTTTCCCAAGCTCGTGGCG GTCCACAAGCCTGGCTCCTCGTCGCTAGACTAGACTACACCTCTTCGGCC ACTTTGTTGAAACTTCAATCAATAGAGCCAGTGGGCTTGAAATCGGTCAC CATTTTGGGAAGAAATCCACACACCGCTGCTTACTCAGCTGGTTGAACGA AGATTTCCTCAATCGACGTCCTCCCGAACAAGAACGGCAATAGCCACTTC TCACTACATATAAATATGATACGAGCAGAACGAAGCAAGATATCGGCGGC GGAAGGGCTGGATTTCTGCGGTTCTCAATGTTTCCTTTAGCCCCCTGAAC ACTCGCCACCCATCACTGGTCAGAGTCGCGCAACGCAGGACGATGCTACA GTGCTTCTTAAAGGCCCTCATGACAGCGATGTATCTACATATACCACACA GAGTGTGTATTGCAATGTAAACATGTTCCAACAAGCCTCCATGTACGGTT CAATCAACGCCACCCCGCGACCTCACTTTACCACACACAACGTGTTGGTG CATGTATGCGCGTATTTTTGTCATTCTTGGTCTTTCCGCTCGCCAGCTGC CTGGGTGCTCGCAACCACCTTTCTTCGACCCAGTCACGAACCGGACGCAC GACTTCTGCTCGAAGCGCCACGCTATCACGGGGGCTTCAAAGTGCAAGCT GAGGGGCTGCTCCAAGAACGTTTACCGCGATCCCGTCACCGGTCTCGTAA GCGCTACATGTAGCGGTCTTTGTTTTCTTTGAAGAGGTACTCTTACCGCT TGGTAGCACTGTTGGTTCGTTTGGCGTCTTCGGCGTTAGTGGCGACCGGA TTGGAAGAAAATTTGTCAGTACGCGTTGTTTCGCATTGATGACACGTCGA TGGATCCTCCACTCAACGGCATCATCCGTTCAAGTGCACGGTCATTTGGG AGGGTTTCTAACCTTGAAGTATTCTTGTTACCCACATGTAGAGGCTCCAC AGATTAATCTCCTCCACAGACAAGAGTCTGGGATCGAGTAGCAATGAATC CACATAGCGTCGTGGAAGCTACTTATGTGAAATTGTGCCCCCGCCGTACG TACCTGCGCAAGTGGAGACTCAAAACCATTCCTGAAGTATCACCCCACCC CCCCTCTTCACCTCATTCGACCCACGCGCTACATTGGCGACAACCAAAAG AGTCTGCCTATTGCTCCAGAGGTCACCAGGGACACGCTATCGCCCTGGGA CAGGGAATGCCGACCGCACAGTCCCATGTGGTCCAGGTCTTCCGCGGGGG AACCACCGGCGCTACTGACTTCAGAATAAGTGTCCTTTCGAAGTCTCATC CTCAGTACTCGTCGCTGAGCCATCAATTTCTCATCAAGTGGGTCAAGCCT GGCGTACCTCTTGTGCGGAGGATTTTGGAGGTGAAGGTGAGGGAAACACT ACACGAACGAACACGGTTAGTGGTACTTCCCAACCTCTAATTCACTGTCT GTCTTAGTGCACGACAGTTGGTTGGTTCATCAATTGGATGTTGATCCGAC AAACGTGTCGAAGAGCGGCAACGGAAGCCTAGTTCAGCTTTGTGAAGCAT CACCTGCAATGATGTAGTTGCTAGGTTCCATCGAGAACTCGGTGCCGTGT GTTGTTGATGAAGCCTTCCAAGACTTCTAAGGGCAGCCTCCCTGCGGCTC TGTGAAATAGGTGGCGGCCAGTTCAGGCGATCAAGTGCCACCTTCCCTTG CCTAACGTGGTCAGTGGACGCCACCCGCATAGCAGAACACCAACATCACC ACGGCATTAATCAAGCCGGGTGGTCAATATAGGAGGTTATCCCGATATTG ACACACCAGTCATCTTGGTGTGCCCCACGCATGTGGGGAAGGAACGGTTA GGCAGAGGCATCATGACCCCACTCGCCCAACCATCGCTCTTGGACAGTTA CTGGGTCTATGGCGCTTATCTCGACGCGTGCAACAACAGGAACATGTACA ACATTGGTCCATGTTCACTATTTCCCGCTGGTATTGTCTCTGCTGGTGAT ATCTACTATGTATCACCATTGCACCACTGCATCCACATCGCAGGTACCAG CCGACATCTATGGAAAATATGTCAACTACAAGCAGGCCAAGGGCAACGTT CGGCGTCGCTTTCACGGTACCTCGTGCTCTTCGAGGTGTAACTTTTTCGT CGACCTGAAAGTGAGCAAAGACGACGCCACACGCGATTTTTCTGTGCAAA ACGTATGGGTCATCCATCACAGCGGCTGCGGCGAATACAACTCGCCGTTT TCCACGATATTGGGCAAAAGCTAAGCACTCGGTCTATGAGGGATAACTCG GCACCACCGTGTTCCGATGCCGAAGTGTCTTGGTGCCCTCGAGCATAGTG TTGTGGTTCCTCCTCCTAATGGCATTGTAGCATTGCGGGGTTGTCGCAGG GTCCTCCGGCAGTGTAAGCATACTGTACAACGAATATGCAGCGTTTTGCG GCCTCTTGTCAAGCCATATTTTTATGCGCTCACGTCCAGCCCATTCATTT GTCGGGGCACATTTCTCAGGGTGACCCCTGTAGCAGCCAGGGGTGCAACG TGTGCAGCATCTGCACCAACGGCTTTATGCTGCAAGGAAACGTCGGCGGG ACGGCGAGAAGGACAAACTACGGCCTGCGATACGGAGATGGCCTCTACTT CAGCAGCGTGTCTGGCAAGTCTAACGACTATGCCCAGCTATCCGAGAAAG TGAGCTAGGTTTTTGTTGCTTAGCGCGACATCGTTTTCATCAACGCGCCT CTGTTTTCAAAAATGTTGAAATGCCCAATCAGCTGAAGCGCGTGACGTTT GTCGAACGCCATAATCGCCCGTTTTTGCCCCAACTATCCTGAAAGATTGC TCGCCGAAACCACACATCAGACGGATGACCTCGCCCCCGCCCCCGCGTTG CCGTGTCGTTCCCCTACACCAATCATCGTTGAGCGACTGGCAGGTTGGCA GCGACGGAAAAAAAGTGAGGTGCATGTTCGTCGCCAACGTCACGGTGGGC AACGCCTACCTGACCCAGCAAGTGTCCCTTGGGCAAAACATGTGCCCCCC CGCCGGACATGACTCGGTTGTGGGAGAGGTGAGAGTAGCACATACTCTGT ATTTTGGCGATGCCGTTGCCTCTAGAAAATCATGAAATCCCGAAGTGACG CCCTATCACCGAGAGAGAACCTGGGGCCCTGTTTTCCAAGTGCACCAGCA AGAGTTACACCACAGGAAGGAGCATTGTCTGTGCATTTTGAGGAGAATTC TACTTATTGATCAGACTATCGGCGTGAGTGACACCCTATCTCGACGGCTC GCTTAGTGTAGCATCGTGAGACAGAAAGGAAAAAATTGTTGGGGGGAATG CGCCCAATCTTGCGCTTCTAGAGTGCGTGGACAAACAGTTTTCGTGTGTC GTCATCGCGCTACGTTATCCGTCTTGTGGTGTAGAAGCTTAAGAGGAGTC GTACACAGGGATAGCCAAACGCTGGTCACCGTAGAATTGTATTGTATACT CGCGAACTAGCCGTTTTTCTCTATCGCCATCTGACAACCCCGCACCTTTC TTACTGTCACTACCCTTTTGTTGGCCATCAGGCGGGAGGCGGACTCAACC ATGACGAGCTCGTGGTATACAAGAACGAAGCCGCGATCCCCTCCTATCTG ATCGTATACGCTTTGCCCTGA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8908:1713..6133+

>mRNA_E_fasciculatus_S2_contig8908.17010.1 ID=mRNA_E_fasciculatus_S2_contig8908.17010.1|Name=mRNA_E_fasciculatus_S2_contig8908.17010.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1263bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8908:1713..6133+ (Ectocarpus fasciculatus EfasUO2)
ATGGGCACCACGGCGAGTATGCCCGTGTTGTGCGGCCTCCCGGGGTGTAC
ACGGCCTTGCTACGATGATGGGCTCGTCGTCCACGACTACTGTGGGCGTA
CTCACGCGAAACAAGCAGCGTCCAGTGGGCTCGTCGCTGGTGGTCGTCGC
TCCCAAACCGGCACCACTTGTCAACTGCCTGGGTGCTCGCAACCACCTTT
CTTCGACCCAGTCACGAACCGGACGCACGACTTCTGCTCGAAGCGCCACG
CTATCACGGGGGCTTCAAAGTGCAAGCTGAGGGGCTGCTCCAAGAACGTT
TACCGCGATCCCGTCACCGGTCTCGTAAGCGCTACATGTAGCGTAGCAAT
GAATCCACATAGCGTCGTGGAAGCTACTTATGTGAAATTGTGCCCCCGCC
GTACGTACCTGCGCAAGTGGAGACTCAAAACCATTCCTGAAGTATCACCC
CACCCCCCCTCTTCACCTCATTCGACCCACGCGCTACATTGGCGACAACC
AAAAGAGTCTGCCTATTGCTCCAGAGGTCACCAGGGACACGCTATCGCCC
TGGGACAGGGAATGCCGACCGCACAGTCCCATGTGGTCCAGGTCTTCCGC
GGGGGAACCACCGGCGCTACTGACTTCAGAATAAGTGTCCTTTCGAAGTC
TCATCCTCAGTACTCGTCGCTGAGCCATCAATTTCTCATCAAGTGGGTCA
AGCCTGGCGTACCTCTTGTGCGGAGGATTTTGGAGGTGAAGGTACCAGCC
GACATCTATGGAAAATATGTCAACTACAAGCAGGCCAAGGGCAACGTTCG
GCGTCGCTTTCACGGTACCTCGTGCTCTTCGAGGTGTAACTTTTTCGTCG
ACCTGAAAGGTGACCCCTGTAGCAGCCAGGGGTGCAACGTGTGCAGCATC
TGCACCAACGGCTTTATGCTGCAAGGAAACGTCGGCGGGACGGCGAGAAG
GACAAACTACGGCCTGCGATACGGAGATGGCCTCTACTTCAGCAGCGTGT
CTGGCAAGTCTAACGACTATGCCCAGCTATCCGAGAAAGTTGGCAGCGAC
GGAAAAAAAGTGAGGTGCATGTTCGTCGCCAACGTCACGGTGGGCAACGC
CTACCTGACCCAGCAAGTGTCCCTTGGGCAAAACATGTGCCCCCCCGCCG
GACATGACTCGGTTGTGGGAGAGGCGGGAGGCGGACTCAACCATGACGAG
CTCGTGGTATACAAGAACGAAGCCGCGATCCCCTCCTATCTGATCGTATA
CGCTTTGCCCTGA
back to top