mRNA_E_fasciculatus_S2_contig8908.17010.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 3.930e-138 Identity = 195/224 (87.05%), Postives = 207/224 (92.41%), Query Frame = 1
Query: 520 ESAYCSRGHQGHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEA 1191
ES YCSRGHQ HAIALGQGM T SHV QVFRGGTTGATDF +SVLSKSH QYSSL HQF+ KWVK GVP VRRILEVKVPADIYGKY NYK+AKGN+RRRFHGTSCS+ CNFFVDLKG+PCSS+GCNVC+ICTNGFMLQGNVGGTA+RT+ GLRYG+GLYFSSVSGKSNDYAQ SEKVGSDGKKVRCMF+ANVT GNAYLTQQVSLGQNMCPPAGHDSVVGEA
Sbjct: 44 ESDYCSRGHQAHAIALGQGMRTVTSHVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVKGGVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSLGQNMCPPAGHDSVVGEA 267
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI) HSP 1 Score: 382 bits (982), Expect = 7.540e-130 Identity = 186/233 (79.83%), Postives = 204/233 (87.55%), Query Frame = 1
Query: 577 MPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYALP 1275
M QSHV Q FRGGTTGATDF +S LSK+HPQY SL HQF+ KW+KPGVP V RILEVKVP DIY K V YK+AKGNVRRRFHGTSCS++CNFFVDLKG+PCSS+ CNVC+ICT+GF+L+ NV GTARR NY RYG+GLYFSSVSGKSNDYAQ SEKVGSDGKKVRCMFVANVT GNAYLTQQ SLGQ+MCPPAG+DSVVGE G GL HDELV Y++EAAIPSYLIVYALP
Sbjct: 1 MAGTQSHVEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKPGVPRVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSLGQDMCPPAGYDSVVGEVGSGLIHDELVAYEDEAAIPSYLIVYALP 233
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI) HSP 1 Score: 371 bits (952), Expect = 5.020e-122 Identity = 210/479 (43.84%), Postives = 265/479 (55.32%), Query Frame = 1
Query: 16 MGTTASMPVLCGLPGCTRPCYDDGLVVHDYCGRTHAKQAASSGL-----------------------------------------------------VAGGRRSQTGTTCQLPGCSQPPFFDPVTNRTHDFCSKRH---AITGASKXXXXXXXXXXXXXXXXXLVSATCSVAMNPHSVVEATYVKLCPRRTYLRKWRLKTIPEVSPHPPSSPHSTHALHWRQPKESAYCSRGHQ--GHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKP---GVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYA 1269
M A+ LCG+P CTRPC+D G VVHD+CGRTHA++A S G+ + G + G+TC+LPGC F DP T+ D+CSK H A T S+ C++ + R +L EV+ H + YC H+ LG T +V ++F GTTG TDF++ VLSK+HP Y SL QF+ KWVKP G V +IL V+VPAD+ K Y++ GNVRRRFHGTSCS++CNFFVDL+G+PCS +GC VCSICT+GF LQGNVGGTARRTN+GLRYG+GLYFSSVSGK+NDYA SEK S+G+++RCMFVANV G A+ T + SL QN CPPAG+DSVVGE G GLN+DELVVYK+EAA+P++LIVY+
Sbjct: 1 MAVPAAPSRLCGIPECTRPCHDGGTVVHDFCGRTHAEEAVSRGIRPSLRRPHGNCHECKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQWTRSTSAGNTNAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQANTRECLRKGCTSTAWLANIEGPQYCSSRCAIDDGGQKAGSS------------RSCKLAGCSEVA-----------LYHHQTGNALDYCGEDHRVRNEQQTLGTNGDT---YVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQQNECPPAGYDSVVGEVGQGLNYDELVVYKDEAALPTHLIVYS 453
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI) HSP 1 Score: 312 bits (799), Expect = 1.010e-98 Identity = 191/435 (43.91%), Postives = 245/435 (56.32%), Query Frame = 1
Query: 46 CGLPGCTRPCYDDGLV--VHDYCGRTHAKQAASSGLVAGGRRS----------QTGT-TCQLPGCSQPPFFDPVTNRTHDFCSKRHAITGASKXXXXXXXXXXXXXXXXXLVSATCSVAMNPHSVVEAT--YVKLCPRR-------TYLRKWRLKTIPE-VSPHPPSSPHSTHALHWRQPKESAYCSRGHQGHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGVPL---VRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
C L GC+R Y D VH++CGR HA +A ++G + R + GT C L GC + + DPVT +CS RH + G + + CS A V E T + C R YL + ++P V+P+ +H R +E+ YC H+ A G P + V + FRGGTT A DF++SVL+ HP+Y S QF+ KW KP V V RI +V+VP DI + GNV+RRFHGTSCS+ C FFVDL+G PC C VC+ICT+GF L+ NVG TARRTN+ LRYGDGLYFSSVSGK+NDYA+LSEK GKKVRCMF+++VTVG A++T + L CPP G DSVVGE G LN+ E+VVYK EAA+P++LIVYAL
Sbjct: 66 CKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSEC-------------IRDGCSRAA---WVDEGTGGVLDYCGSRCAGEVGMNYLVGVGVCSLPGCVNPN---------FVHPRDRQETGYCCEDHRLRATQRSLG-PNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQCPPPGFDSVVGEKGPALNYPEVVVYKEEAALPTHLIVYAL 474
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI) HSP 1 Score: 271 bits (693), Expect = 3.370e-83 Identity = 185/446 (41.48%), Postives = 241/446 (54.04%), Query Frame = 1
Query: 37 PVLCGLPGCTRPCYDDGLVVHDYCGRTHAKQAASSGLVAGGRRSQTGT-TCQLPGCSQPPFFDPVTNRTHDFCSKRHAITGASKXXXXXXXXXXXXXXXXXLVSATCSVAMNPHSVV----EATYV----KLCPRRTYLRK-WRLKTIPE--------------VSPHPPSSPH----STHALHWRQPKES-AYCSRGHQGHAIALGQG-MPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKP----GVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
P C +P CTRP + +VH++CGRTHA +A S GL A R CQL GCS+P +FD T R + + XXXXXXXXXXX ++ Y+ +LC RR W T ++ H S S LH Q E YCS GH+ + +G + +++ +V V+ GT F + L ++HP+ SL QF KWVKP G+ +VR I V+VPA++ K+ Y + N+RRRFHGTSCS CNF VD + PC + C++C+I GF L NVG TA N+ LRYG G+YFSSVSGK+NDYA L+ K DG K+RCMFVANV G AY T++ +L CPP G++SVVGE G GLN+DELVVYK EAA+P++LIVYAL
Sbjct: 7 PGSCDIPECTRPRHQRAGIVHNFCGRTHAMEAVSRGLAAKLDRPHGRCHVCQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGDWIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARLCARRGCTSTAWLANTDSRQYCSAYCFSKERLVLNKHAGSVCKLRYCSVGTLHHLQTGEDLGYCSEGHRLLSKPPSKGQLRSSEPYVHGVYSVGTPR---FNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVR-IFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALDDGKCPPPGYESVVGEVGQGLNYDELVVYKEEAALPTHLIVYAL 448
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: Hypothetical (protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HUZ3_POLGL) HSP 1 Score: 218 bits (555), Expect = 1.940e-63 Identity = 154/434 (35.48%), Postives = 206/434 (47.47%), Query Frame = 1
Query: 34 MPVLCGLPGCTRPCYDDGLVVHDYCGRTHAKQAASSGLVAGGRRSQTGTTCQLPGCSQPPFFDPVTNRTHDFCSKRHAITGASKXXXXXXXXXXXXXXXXXLVSATCSVAMNPHSVVEATYVKLCPRRTYLRKWRLKTIPEVSPHPPSSPHSTHALHWRQPKESAYCSRGH-----QGHAIALGQGMPTAQ---SHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGV-PLVRRILEVKVPADIYGKYVNY-----KQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQN----MCPPAGHDSVVGE---AGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
M +C L GCTRP + VVH YCGRTHA Q L C L GC+Q +FD R HDFCSK HA ++ + + RRT + ++P + P + ST LH +C R H Q + L G P AQ V +VF G TG D+ ++VL++ HP+Y + QFL +WV PG P VRR+L+V+ +Y +Y Y +Q RRFHGTS S +C+F +D+ C+ C VC IC GF + G + LRYG G YFS S KSNDYA SE+ S G++ R MF+ V G ++ +++S+ + G+ SV + GG LNHDELV+Y+NEAAIPSYLIVY L
Sbjct: 1 MATMCVLQGCTRPAWIGAGVVHKYCGRTHAAQDLGWHLKEPHGYCHR---CNLEGCNQTVYFDEAAGRVHDFCSKGHA----------------------------------DEAIEDGDWQPSNKRRTANSPQQRCSLPGCAA-PRYNDQSTGHLH-------DFCGRSHALLAKQRGLVGLAAGPPIAQYLPQAVERVFGG--TGRDDYSVAVLTRQHPKYEGIKEQFLDRWVHPGPKPRVRRLLQVRNTQTVYNQYQAYLGTQVRQGYQTEHRRFHGTSLSPQCSFGIDMASTLCTQNDCAVCGICRYGFDIDRQ--GASGSLRLALRYGVGHYFSRTSSKSNDYAGASERQ-SAGQRTRLMFLCKVAPGPSFEAKEISMSDDDLAEQVHGRGYTSVEAKNTAEGGPLNHDELVIYQNEAAIPSYLIVYEL 384
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ6_ECTSI) HSP 1 Score: 222 bits (566), Expect = 6.060e-63 Identity = 155/472 (32.84%), Postives = 203/472 (43.01%), Query Frame = 1
Query: 46 CGLPGCTRPCYDDGLV--VHDYCGRTHAKQAASSGLVAGGRRSQTGTT-----------------------------------------------CQLPGCSQPPFFDPVTNRTHDFCSKRHAITGASKXXXXXXXXXXXXXXXXX---LVSATCSVAMNP--------HSVVEATYVKLCPRRTYLRKWRLKTIPEVSPHPPSSPHSTHALHWRQPKE---SAYCSRGHQGHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKPGVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
C GCTRPC D +H C ++ A S+ + GR S +T CQL GC++ + T +DFCS++HA + + C+ P H++ Y+ +C R + W PK S+YC R H+ V+Q GG+ G + FR+ L +SH +Y S+ QF KW K VP V I +K+P + KY+ YK GN RRRFHGTS +S C+FF K PCSS+ C C+IC GF L G + +Y RYG GLYFSSVSGKSNDYA SE+ +G + R MF+ NV VG A +T+ V L + CP G DSVVG G LNHDE VVY AAIPSY+IVY +
Sbjct: 162 CKHSGCTRPCAADAKTGRIHGVCQTHYSGAANSTTYIVAGRTSAASSTQAPARAAMGGTVGIIKISSIAQAAPXXXXXSSASGRLTRPSAVSSGQCQLDGCAKLSAINTSTGERYDFCSRQHAQQAKNSGKAGPFNGGGAFLAVPGPAVCMLLGCAKPQAPGYDHCCKDHALAARKYIPMCTLRGCAKDA-----------------------WFDPKRNQYSSYCGRAHRNEG-----------ERVLQEMTGGS-GGSGFRLQELDRSHQKYESVKTQFTSKWQKGNVPTVENIFLIKMPMGVVDKYLAYKNRVGNERRRFHGTSRASDCDFFTGSKKQPCSSRTCVACNICMVGFKLVGTT-----KKSY-ARYGRGLYFSSVSGKSNDYADGSEQ-RRNGARYRTMFLCNVAVGKAKVTEAVDLPDDQCPGKGFDSVVGNKGANLNHDETVVYDEAAAIPSYMIVYRM 591
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: PARP (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE) HSP 1 Score: 205 bits (521), Expect = 2.490e-60 Identity = 105/221 (47.51%), Postives = 143/221 (64.71%), Query Frame = 1
Query: 628 GATDFRISVLSKSHPQYSSLSHQFLIKWVKP----GVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGD--PCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYAL 1272
G+++ + +L ++ +Y++L F +W+KP GV + R+ ++V ++ K+ YK GN+ +RFHGTSC+ CNF VD +G PC C+VC+IC GF L NV GTAR T LRYG+G+Y +SVSGK+NDYA S K ++RCMFVA+V VG A+ T+ L N CPP G+ SVVGE G GLN DE VVY EAA+P++LIVYAL
Sbjct: 11 GSSESVLQMLEENSREYTALRGLFNARWMKPRPAKGVS-IERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLPANQCPPPGYQSVVGEVGQGLNFDEFVVYNEEAALPTHLIVYAL 230
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: TPR (repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI) HSP 1 Score: 214 bits (546), Expect = 2.230e-59 Identity = 112/223 (50.22%), Postives = 151/223 (67.71%), Query Frame = 1
Query: 622 TTGATDFRISVLSKSHPQYSSLSHQFLIKWVKP----GVPLVRRILEVKVPADIYGKYVNYKQ-AKGNVRRRFHGTSCSSRCNFFVDLKGD--PCSSQGCNVCSICTNGFMLQGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGKKVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYA 1269
+ G++ + +L +Y +L F +W+KP GV +VR I ++VP +++ K+ YK+ N+R+RFHGTSC+ CNF VD +G PC C+VC+IC GF L NV TAR + LRYG G+YFSSVSGK+NDYA+LS K GSDG ++RCMFVANV G A+ T++ L Q+ CPP+G SVVGE G LN+DE+VVYK EAA+P++LIVYA
Sbjct: 454 SVGSSSSTLRILDDDDWEYEALCDLFKTRWLKPQPTNGVSIVR-IFSIQVPLEVHDKHELYKRMVVVNLRQRFHGTSCNDGCNFMVDPQGATAPCGLSSCSVCNICMLGFKLGKNVARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLPQSECPPSGCQSVVGEVGHALNYDEVVVYKEEAALPTHLIVYA 675
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Match: Hypothetical (protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I6I7_POLGL) HSP 1 Score: 207 bits (526), Expect = 1.850e-58 Identity = 116/257 (45.14%), Postives = 153/257 (59.53%), Query Frame = 1
Query: 529 YCSRGHQGHAIALGQGMPTAQSHVVQVFRGGTTGATDFRISVLSKSHPQYSSLSHQFLIKWVKP--GVPLVRRILEVKVPADIYGKYVNYKQAKGNVRRRFHGTSCSSRCNFFVDLKGDPCSSQGCNVCSICTNGFML--QGNVGGTARRTNYGLRYGDGLYFSSVSGKSNDYAQLSEKVGSDGK----KVRCMFVANVTVGNAYLTQQVSLGQNMCPPAGHDSVVGEAGGGLNHDELVVYKNEAAIPSYLIVYALP 1275
+C + H A A G P S V +V GG+ DF + +L + HP Y+++ QFL W K G P V R+L+++ +I + Y QA GNVRRRFHGTS S C F + PCS + C VC IC F L G G R T+ LRYG GLYFS+ SGKSNDYA+ SE++ + + + RCMFV +V +G A+LT + L Q CPP G+D+VVGE G LN DE+VVY AA+PS+L+VY+LP
Sbjct: 195 FCCQDHADKARARGLLAPQDPSTVDRVLLGGSG---DFCVELLRRQHPDYAAVKQQFLSSWRKSEQGPPRVERLLKIRSALEIREAFAEYAQAVGNVRRRFHGTSQSESCTFGTHPEKAPCSDKKCRVCCICRRTFSLLHAGETFGGPRNTS-ALRYGPGLYFSATSGKSNDYAEGSERMKHEARGAQRRWRCMFVCHVAIGKAHLTTEGWLPQQQCPPPGYDAVVGEVGENLNFDEVVVYDEAAAVPSFLVVYSLP 447 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8908.17010.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8908.17010.1 >prot_E_fasciculatus_S2_contig8908.17010.1 ID=prot_E_fasciculatus_S2_contig8908.17010.1|Name=mRNA_E_fasciculatus_S2_contig8908.17010.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=421bp MGTTASMPVLCGLPGCTRPCYDDGLVVHDYCGRTHAKQAASSGLVAGGRRback to top mRNA from alignment at E_fasciculatus_S2_contig8908:1713..6133+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8908.17010.1 ID=mRNA_E_fasciculatus_S2_contig8908.17010.1|Name=mRNA_E_fasciculatus_S2_contig8908.17010.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4421bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8908:1713..6133+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8908:1713..6133+ >mRNA_E_fasciculatus_S2_contig8908.17010.1 ID=mRNA_E_fasciculatus_S2_contig8908.17010.1|Name=mRNA_E_fasciculatus_S2_contig8908.17010.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1263bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8908:1713..6133+ (Ectocarpus fasciculatus EfasUO2)back to top |