mRNA_E_fasciculatus_S2_contig8881.16985.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAP0_9PHAE) HSP 1 Score: 386 bits (991), Expect = 5.600e-133 Identity = 187/202 (92.57%), Postives = 193/202 (95.54%), Query Frame = 1
Query: 16 LCVSGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDAVQVVERAMRKSLAAPTQPPGYLHRLVGRSVVTNAEIREATVEGARNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNSTLSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSVEQPPVEYSS 621
L SGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLS AVQVVERAMRKSL PTQPPGYLHRLVGRSVVTNAEIREATVEGARNL +FWLVGVVEQYGGFV VLRALLDPDGLH+DLWRPQLEEHKLN SPVQS+NVLASLDPQL+KQFNSTLSYQWLMYGHAVRLF ARCQEVLPEYQHWEFCSV+QPPVEY+S
Sbjct: 152 LFASGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSKAVQVVERAMRKSLETPTQPPGYLHRLVGRSVVTNAEIREATVEGARNLKTFWLVGVVEQYGGFVAVLRALLDPDGLHDDLWRPQLEEHKLNASPVQSSNVLASLDPQLVKQFNSTLSYQWLMYGHAVRLFRARCQEVLPEYQHWEFCSVQQPPVEYTS 353
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ5_9PHAE) HSP 1 Score: 167 bits (423), Expect = 2.210e-47 Identity = 91/216 (42.13%), Postives = 129/216 (59.72%), Query Frame = 1
Query: 28 GFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDAVQVVERAMRKSLA------------------APTQPPGYLHRLVG--RSVVTNAEIREATVEGARNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNSTLSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSVEQPPVEY 615
GFQ + P+ +VT LRNPLE++VS +QY ++ T TL A V +AMRK+L +P Q G++ RLVG + + ++ A + NL +FWLVG+VEQY GFV VL LLDP+ H D+W+ + N SP++S +VLA+LDPQL+++FN +L+ QW +Y AV L+ RC+EVLP +H E C+V P EY
Sbjct: 114 GFQRHLRRPYLMVTALRNPLEVYVSAQQYTHKRKTKTLEKAQAFVSKAMRKTLRQYGDGPALGEEEMPFGGKSPQQIGGFVFRLVGINKKQLYGEKLEVAVTKAIENLETFWLVGLVEQYAGFVEVLELLLDPERKHVDVWQTY-STRQFNTSPLRSRDVLAALDPQLVREFNGSLALQWRVYEKAVALWDLRCREVLPVAKHEELCTVALPFSEY 328
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Similar (to heparin sulfate O-sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE4_ECTSI) HSP 1 Score: 143 bits (361), Expect = 9.520e-39 Identity = 86/200 (43.00%), Postives = 124/200 (62.00%), Query Frame = 1
Query: 31 FQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDAVQVVERAMRKSL--AAPTQPPGYLHRLVGRS--------VVTNAEIREATVEGA-RNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNST-LSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSV 594
F+ Y P+ +VTTLRNPLELFVS +Q++++A T TL D+V V ++MR L A PT ++ R + V+ + E A V+ A +LN+F++VGVVEQY GF+ VL+ LDPD H LW + K N SPV S +VL+ +DP L+++FN+T L QW +Y A++L+ RC+E+LP +H CSV
Sbjct: 71 FRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSMRSRLKWADPTDL-AFIRRFLDSKTANSYDPQVMYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAAAVGV-KDNGSPVHSGDVLSGIDPDLVREFNATTLGRQWQVYDVALKLWDRRCREILPAEEHEALCSV 268
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G7_ECTSI) HSP 1 Score: 148 bits (373), Expect = 1.770e-38 Identity = 83/219 (37.90%), Postives = 126/219 (57.53%), Query Frame = 1
Query: 28 GFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDAVQVVE---------RAMRKSLAAP-----TQPPGYLHRLVG--------RSVVTNAEIREATVEGARNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNSTLSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSVEQPPVEYS 618
GFQ + +P+ + TTLRNPLELFVSG+QYLNR + + AV +VE +R + P T+ G+++RLV +V + E NL++FWLVGV+EQY GF+ VL+A++DP+ D+W+ + K N SP + VLA++DP L+++FN TLS+QW +Y +AV L+ RC ++L + + C V P +Y+
Sbjct: 130 GFQNHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTILRAIKQHQLRGDVMVPEGMGNTKSVGFIYRLVDPVQANSTQEGLVGGKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWK-RYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWEVYSYAVDLYKHRCHQML-HTRDLDMCEVPVAPSQYT 346
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP4_ECTSI) HSP 1 Score: 144 bits (363), Expect = 2.800e-38 Identity = 82/195 (42.05%), Postives = 112/195 (57.44%), Query Frame = 1
Query: 40 YAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDAVQVVERAMRKSLA-APTQPPGYLHRLVGRS---------VVTNAEIREATVEGARNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNSTLSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSV 594
Y PH L+T LR+PLELFVS +Q+ +R TA+L A V MR L G++ R +G V T + A +L++FW+VGVVEQY GFV VL+ LDP+ H LW E + N SPV S +VL +DP L+++FN+TLS+QW +Y A++L+ +RC+EVLP H CSV
Sbjct: 146 YVTPPHLLITMLRDPLELFVSAKQFKHREETASLEAAADFVASNMRGRLGWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVNVLQHTLDPELEHPRLWEAASEVNN-NGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSV 339
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ3_9PHAE) HSP 1 Score: 144 bits (363), Expect = 2.130e-37 Identity = 91/233 (39.06%), Postives = 118/233 (50.64%), Query Frame = 1
Query: 22 VSGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDA-------------------------VQVVERA------MRKSLAAPTQPPGYLHRLVGRSVVTNAE---IREATVEGARNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNSTLSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSVEQPPVEYS 618
+ GFQ +P +VT+LRNPLE FVSG Q+L+ T TL A + ERA +R +P Q G++ RLVG+ + A E +NL +FW+VGVVEQY G VL+ LLDPD H LW H N SPV S VLA++DP L++QFN +L+ QW +Y AV L+ RC+EVLP H C+V P YS
Sbjct: 225 IWGFQRLVEKPFLMVTSLRNPLEAFVSGRQFLHPDMTETLEQASAAHAQAFVSYAMLNALGIDGPGHVAMLGERASLGHALLRGRRQSPDQLGGFIFRLVGQENAKKLHGLALSRAADEAMKNLEAFWVVGVVEQYAGLQAVLKRLLDPDLKHPALWDKYSYRHS-NRSPVDSRYVLAAIDPSLVRQFNDSLALQWKVYEKAVELWGTRCREVLPITVHDAMCTVAPPDSRYS 456
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ6_9PHAE) HSP 1 Score: 140 bits (354), Expect = 1.210e-36 Identity = 84/200 (42.00%), Postives = 124/200 (62.00%), Query Frame = 1
Query: 31 FQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDAVQVVERAMRKSL--AAPTQPPGYLHRLVGRS--------VVTNAEIREATVEGA-RNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNST-LSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSV 594
F+ Y P+ +VTTLRNPLELFVS +Q++++A T TL D+V V ++M+ L A PT ++ R + V+ + E A V+ A +LN+F++VGVVEQY GF+ VL+ LDPD H LW + N SPV S +VL+ +DP L+++FN+T L+ QW +Y A++L+ +RC+E+LP H CSV
Sbjct: 181 FRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSMKSRLGWADPTDL-AFIRRFLDSETANSYDPQVLYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAAAVGVLD-NGSPVHSGDVLSGIDPDLVREFNATALARQWQVYDVALKLWDSRCREILPPEDHEALCSV 378
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ87_ECTSI) HSP 1 Score: 127 bits (318), Expect = 2.400e-32 Identity = 79/199 (39.70%), Postives = 111/199 (55.78%), Query Frame = 1
Query: 31 FQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDAVQVVERAMRKSLAAPTQPP-GYLHRLVG---------RSVVTNAEIREATVEGARNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNST-LSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSV 594
F++ AA P+ +VTTLRNPLELFVS Q+ +R T TL+ A + V MR L G++ + R V T+ E E +LN+F +VGVVEQY GFV VL+ LDP + +W + N SPV S +VL ++DP L++ +N T L QW +Y A++L+ +RC+EVLP H +C V
Sbjct: 67 FRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQMRTILGLEGLGQLGFIRVFLNDTGAVGYNPRGVYTHNETWAMAAESVEHLNTFLVVGVVEQYEGFVEVLKHTLDPGLENPSVWTTGAKVQN-NKSPVSSRDVLRNIDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPRSDHERYCDV 264
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF0_9PHAE) HSP 1 Score: 125 bits (314), Expect = 8.190e-31 Identity = 78/199 (39.20%), Postives = 110/199 (55.28%), Query Frame = 1
Query: 31 FQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDAVQVVERAMRKSLAAPTQPP-GYLHRLVG---------RSVVTNAEIREATVEGARNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNST-LSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSV 594
F++ AA P+ +VTTLRNPLELFVS Q+ +R T TL+ A + V MR L G++ + R V T+ E E +LN+F +VGVVEQY GF+ VL+ LDP + +W N SPV S +VL ++DP L++ +N T L QW +Y A++L+ +RC+EVLP H +C V
Sbjct: 176 FRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQMRTILGLEGLGQLGFIRVFLNDTGAVGYNPRGVYTHNETWAMATESVEHLNTFLVVGVVEQYEGFIEVLKHTLDPGLENPSVWTTGANVQN-NKSPVPSRDVLRNMDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPPSDHERYCDV 373
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX6_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.080e-28 Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 208 GYLHRLVG--RSVVTNAEIREA-TVEGARNLNSFWLVGVVEQYGGFVTVLRALLDPDGLHEDLWRPQLEEHKLNVSPVQSANVLASLDPQLLKQFNSTLSYQWLMYGHAVRLFTARCQEVLPEYQHWEFCSVEQP 603
GY+ RLVG R+ + E EA T + +NL FW+VGVVEQY G + V R LDP+ H LW + + N SPV S VLA +DP+L++ FN +L+ QW +Y AV L+ RC+EVLP+ H + C+V P
Sbjct: 35 GYIRRLVGADRNAIPGDEALEAATAQALKNLERFWIVGVVEQYTGLLEVWRRSLDPENKHGRLWN-KYAAMQFNSSPVGSREVLALIDPELVRYFNGSLALQWDVYERAVGLWEVRCREVLPDRLHEDMCTVPHP 168 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8881.16985.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8881.16985.1 >prot_E_fasciculatus_S2_contig8881.16985.1 ID=prot_E_fasciculatus_S2_contig8881.16985.1|Name=mRNA_E_fasciculatus_S2_contig8881.16985.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=208bp MTIILLCVSGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSDAback to top mRNA from alignment at E_fasciculatus_S2_contig8881:5636..6259- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8881.16985.1 ID=mRNA_E_fasciculatus_S2_contig8881.16985.1|Name=mRNA_E_fasciculatus_S2_contig8881.16985.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=624bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8881:5636..6259- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8881:5636..6259- >mRNA_E_fasciculatus_S2_contig8881.16985.1 ID=mRNA_E_fasciculatus_S2_contig8881.16985.1|Name=mRNA_E_fasciculatus_S2_contig8881.16985.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=624bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8881:5636..6259- (Ectocarpus fasciculatus EfasUO2)back to top |