mRNA_E_fasciculatus_S2_contig8867.16969.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B6_ECTSI) HSP 1 Score: 225 bits (573), Expect = 3.990e-65 Identity = 122/164 (74.39%), Postives = 126/164 (76.83%), Query Frame = 1
Query: 1 LVRQASDASVG-DDKDTKDPKTADSGKKIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLTVAQSFTLKTWINQMAGVSVASFVALLVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDKDLMNDVSSYSDM 489
LVRQ+SDASVG DDKDTKDP+TADSGKKIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGL+VAQSFTLK DMARSVFGAPVSWYDATPLGRIFNRFSSD+ITLDKDLMNDVSSYSDM
Sbjct: 934 LVRQSSDASVGGDDKDTKDPRTADSGKKIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLSVAQSFTLK-------------------------------------DMARSVFGAPVSWYDATPLGRIFNRFSSDIITLDKDLMNDVSSYSDM 1060
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ25_9PHAE) HSP 1 Score: 204 bits (518), Expect = 9.930e-58 Identity = 113/164 (68.90%), Postives = 115/164 (70.12%), Query Frame = 1
Query: 25 SVGDDK---------DTKDPKTADSGKKIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLTVAQSFTLKTWINQMAGVSVASFVALLVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDKDLMNDVSSYSDM 489
+VGDD DTKDP TADSGKKIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLTVAQSFTLK DMARSVF APVSWYDATPLGRIFNRFSSD+ITLDKDLMNDVSSYSDM
Sbjct: 995 AVGDDSGSGLWLYIADTKDPSTADSGKKIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLTVAQSFTLK-------------------------------------DMARSVFRAPVSWYDATPLGRIFNRFSSDIITLDKDLMNDVSSYSDM 1121
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ8_9STRA) HSP 1 Score: 190 bits (483), Expect = 5.090e-53 Identity = 95/149 (63.76%), Postives = 109/149 (73.15%), Query Frame = 1
Query: 82 IIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLTVAQSFTLKTWINQMAG-------------VSVASFVALLVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDKDLMNDVSSYSDM 489
II E A G PKL+L+ YF+YCGG WFG W GLS LWQ LTVAQSF LK WIN+MA VSV SF ALL RT++IT GS++AS VH MA SVFGAP+SW+DATPLGRIFNRFSSD++TLDKDLMND+S+Y DM
Sbjct: 734 IIAKEAHAQGNPKLSLYMRYFKYCGGSWFGAAWLGLSLLWQALTVAQSFYLKEWINEMAADNDNGPGLWRYIAVSVGSFFALLARTIIITGGSVQASKRVHHAMATSVFGAPISWFDATPLGRIFNRFSSDIVTLDKDLMNDISTYGDM 882
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N1_HETAK) HSP 1 Score: 125 bits (314), Expect = 1.910e-30 Identity = 68/149 (45.64%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 79 KIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLTVAQSFTLKTWINQMAGVS-------------VASFVALLVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDKDLMNDVSSYSD 486
++I E A G LA + Y R CGG F + + GL ALWQG +Q+F L WI +M+ VA+F AL++R++ I GSLRAS H MA+ V AP+SW+D+TPLGRI+NRFSSDV T+DK+LMND++ + D
Sbjct: 14 RLIRAEAVARGHVPLATYLYYLRACGGWPFLLGFLGLCALWQGAFFSQNFFLSDWITEMSEGKNEGPAFYTFVYSCVATFTALMIRSIAIAFGSLRASQITHDTMAKRVLFAPMSWFDSTPLGRIYNRFSSDVETIDKELMNDMTGFLD 162
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HWI2_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.710e-22 Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 1
Query: 82 IIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLTVAQSFTLKTWINQMAG------------------VSVASFVALLVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDKDLMNDVSSYSD 486
++ EKR G+ L L+ Y GGL FG+ W L QG+ Q+ W++QM+G V+V +L+R + GSLRAS H+ M + APVSWYDATP+GR+ NRFSSD+ + D ++M+++ S+ D
Sbjct: 616 LVRPEKRNKGKISLRLYLNYMYSAGGLSFGVIWTSLGFGVQGMYFIQNLVFSDWVDQMSGEDGVDTAKENGAMLMYLYVTVGYLALILLRATISAFGSLRASRLQHQAMIARILHAPVSWYDATPIGRVINRFSSDLTSFDTEVMDELYSFVD 768
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXE0_HETAK) HSP 1 Score: 95.1 bits (235), Expect = 1.070e-19 Identity = 55/151 (36.42%), Postives = 90/151 (59.60%), Query Frame = 1
Query: 82 IIEVEKRAVGRPKLALFTTYFRYCGG-LWFGIFWAGLSALWQGLTVAQSFTLKTWINQM-AGVSVASFVAL--------------LVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDKDLMNDVSSYSD 486
++ E+RA G P L ++T+YF+ CGG L F + + Q QS++L W++++ G + AL L+R+++ +GS+RAS T+H MA V AP+ W+++TPLGRI NRFSSD++ +D+ LM+ +S++SD
Sbjct: 293 LVREEERAKGAPALRIYTSYFKACGGVLGFTLPFCFSIIGAQICMFGQSYSLGLWVDRLQTGSNATGGSALWWYLAATGLVLLLGLIRSIVQANGSMRASQTIHDTMAARVLRAPLHWFESTPLGRIVNRFSSDLLEIDEQLMDVLSTFSD 443
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: Multidrug-resistance (like protein isoform h n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K413_9EUKA) HSP 1 Score: 94.7 bits (234), Expect = 1.550e-19 Identity = 57/146 (39.04%), Postives = 82/146 (56.16%), Query Frame = 1
Query: 73 GKKIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLTVAQSFTLKTWINQM---------------AGVSVAS---FVAL-LVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDK 453
G KII+ E+RA G KL ++ Y R GGLWF + + L A++ L QS LK W+ +M G+ VA+ FV + L R +L+ S+RAS +H M +V A +SW++ATP+GRI NRFSSD+ +D+
Sbjct: 675 GGKIIKKEERAKGAAKLKIYVVYLRAAGGLWFALGFCLLLAVYSSLNPVQSVALKQWMQEMEVEGAPISSGRVLRACGLYVAAACGFVFITLCRNVLLPYASVRASRGLHGGMMHAVLRARISWFEATPVGRILNRFSSDISAIDQ 820
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: Multidrug (resistance-associated protein 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR24_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 7.390e-19 Identity = 56/153 (36.60%), Postives = 86/153 (56.21%), Query Frame = 1
Query: 73 GKKIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALW--QGLTVAQSFTLKTWINQMAG---------------VSVASFVALLVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDKDLMNDVSSY 480
GK++I+ E++A GR K ++ Y + GG F I A L Q L Q+ L W+ ++ G S A+ V ++++ LL + SL AS +H+DM R V AP+SW++ TPLGRI NRFSSD+ T+D D+MN ++++
Sbjct: 1060 GKQLIKAEQKAEGRVKWRVYLAYVQATGGFVFAI--AALLTFGGVQALYYFQNKALGDWVVRLEGGSTSHRLENAYPYLYFSAANIVVMVLQALLTSGSSLLASRRIHRDMGRRVLRAPLSWFERTPLGRIQNRFSSDMDTIDVDMMNTLTNF 1210
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: Hypothetical (protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFK2_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.280e-18 Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 79 KIIEVEKRAVGRPKLALFTTYFRYCGGL-----------WFGIFWA----GLSALWQGLTVAQSFT----LKTWINQMAGVSVASFVALLVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDKDLMNDVSSY 480
K+I+ EK+ VG + ++ Y + CGG+ W + W GL L S+T L +I V +++F++ L+ +L SLRA+ +H +M R V AP SW+D TPLGRI NRFS D+ T+DK++MN++S +
Sbjct: 20 KLIDKEKKQVGEVPITIYWFYVKACGGIIATLLLILCFIWIAVSWVLETYGLGLWMDSLQSGNSYTRIKSLAVYIIFSISVLLSAFISSLLEAIL----SLRAAQKIHDNMTRKVVLAPCSWFDTTPLGRIINRFSQDISTVDKEIMNNLSEF 168
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GZ10_9EUKA) HSP 1 Score: 89.4 bits (220), Expect = 8.890e-18 Identity = 52/141 (36.88%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 79 KIIEVEKRAVGRPKLALFTTYFRYCGGLWFGIFWAGLSALWQGLTVAQSFTLKTWINQM------AGVSVASF--------VALLVRTLLITSGSLRASSTVHKDMARSVFGAPVSWYDATPLGRIFNRFSSDVITLDKDL 459
++ + E+RA GR KL ++ Y R G + F + W + L QS TLK+W+++M A +ASF VA LL+ GS+RAS +H +A +V A +SW+ ATP+GRI NRFSSD+ +D ++
Sbjct: 17 RLTKGEERARGRAKLRIYLVYLRAFGSMGFILLWVATNVAAAALNPGQSVTLKSWLDEMMTAGPPALPGLASFLYTAGGFAVAQTAMLLLLPIGSVRASRRLHAQLASNVLRATLSWFQATPVGRILNRFSSDISAIDSEV 157 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8867.16969.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8867.16969.1 >prot_E_fasciculatus_S2_contig8867.16969.1 ID=prot_E_fasciculatus_S2_contig8867.16969.1|Name=mRNA_E_fasciculatus_S2_contig8867.16969.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=163bp LVRQASDASVGDDKDTKDPKTADSGKKIIEVEKRAVGRPKLALFTTYFRYback to top mRNA from alignment at E_fasciculatus_S2_contig8867:2877..5261+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8867.16969.1 ID=mRNA_E_fasciculatus_S2_contig8867.16969.1|Name=mRNA_E_fasciculatus_S2_contig8867.16969.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2385bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8867:2877..5261+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8867:2877..5261+ >mRNA_E_fasciculatus_S2_contig8867.16969.1 ID=mRNA_E_fasciculatus_S2_contig8867.16969.1|Name=mRNA_E_fasciculatus_S2_contig8867.16969.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=489bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8867:2877..5261+ (Ectocarpus fasciculatus EfasUO2)back to top |