mRNA_E_fasciculatus_S2_contig8866.16964.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8866.16964.1
Unique NamemRNA_E_fasciculatus_S2_contig8866.16964.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 2.120e-145
Identity = 211/245 (86.12%), Postives = 223/245 (91.02%), Query Frame = -2
Query:    8 RKWEGGLVEYGSFIFLDVEWFATVLDPLFCHKRDACGNIDLGGMRVTDVDSLDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFPLPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPHPFWRYGALIVGDGAEEGLFSLSLQYSEKRKLLAIEVSGGRTEVHAWAALSNVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKIRT 742
            RKWEGGLVEYGS++FLDVEWFATVLDPLFCHKRD+ G IDLGG+RV DVDSLDR DEEHV EPQLA +LWGP LAPHLL ALKSAGLTFPL NDSNGGLVILLRMDTKPPP+YGIKL+E DQANKFDLRLVVECSF LGLPPGFVERLLARCCHLGLP+PFWRYGALIVG GAEE +FSLSL+YSE RK+L +EVSGG TEV AWAALS VLSVTIKML EFPGLPCRTTFFCP HK  GMKIRT
Sbjct:  658 RKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRDSYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPVLAPHLLLALKSAGLTFPLSNDSNGGLVILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEERMFSLSLEYSEARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTNGMKIRT 902          
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW8_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.270e-135
Identity = 189/247 (76.52%), Postives = 212/247 (85.83%), Query Frame = -2
Query:    2 RKWEGGLVEYGSFIFLDVEWFATVLDPLFCHKRDACGNIDLGGMRVTDVDSLDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFPLPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPHPFWRYGALIVGDGAEEGLFSLSLQYSEKRKLLAIEVSGGRTEVHAWAALSNVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKIRTTN 742
            RKWEGGLVEYG+++FLDVEWFATVLDPLF H+RD+ G+IDLGG+RVT++ SL R D EHVFEPQLA ELW  ELAPHLL ALKSAGLTFPLPND NGGLVILLRMDTK PPEY I+ +EA+QA K+DL L V C FSLG+PPGFVERLLARCC LG+P+PFWRYGAL+VG+GAEEGLFSLSL YSE   +L +EV GG  EVHAWAALS VLSV IKMLSEFPGLPC   FFCP+HK KGM +RTT+
Sbjct:   62 RKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNIASLRRLDNEHVFEPQLAEELWSRELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKSPPEYSIRREEANQARKYDLTLTVACWFSLGVPPGFVERLLARCCRLGVPYPFWRYGALVVGNGAEEGLFSLSLDYSEHDNMLKVEVLGGGGEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPVRTTD 308          
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 4.040e-130
Identity = 195/246 (79.27%), Postives = 207/246 (84.15%), Query Frame = -2
Query:    8 RKWEGGLVEYGSFIFLDVEWFATVLDPLFCHKRDACGNIDLGGMRVTDVDSLDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFP-LPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPHPFWRYGALIVGDGAEEGLFSLSLQYSEKRKLLAIEVSGGRTEVHAWAALSNVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKIRT 742
            RKWEGGLVEY S++FLDVEWFATVLDPLFCHKRD+ G I LGGMRVTDVD LDR DE+HV EPQLA E W                  FP LPNDSNGGLVILLRMDTKP P+YGIKL+EADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLP+PFWRYGALIVG GAE  +FSLSL+YSE+RK+L +EVSGGRTEV AWAALS VLSVTIKMLSEFPGLPC TTFFCP HK K MKIRT
Sbjct:  368 RKWEGGLVEYSSYVFLDVEWFATVLDPLFCHKRDSYGKIYLGGMRVTDVDGLDRLDEDHVLEPQLAEEDW-----------------RFPSLPNDSNGGLVILLRMDTKPSPDYGIKLKEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEVRMFSLSLEYSEERKILTVEVSGGRTEVFAWAALSKVLSVTIKMLSEFPGLPCGTTFFCPLHKTKRMKIRT 596          
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 5.150e-130
Identity = 193/247 (78.14%), Postives = 217/247 (87.85%), Query Frame = -2
Query:    2 RKWEGGLVEYGSFIFLDVEWFATVLDPLFCHKRDACGNIDLGGMRVTDVDSLDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFPLPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPHPFWRYGALIVGDGAEEGLFSLSLQYSEKRKLLAIEVSGGRTEVHAWAALSNVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKIRTTN 742
            RKWEGGLVEYG+++FLDVEWFATVLDPLF H+RD+ G+IDLGG+RVT++ SL R D EHVFEPQLA ELW PELAPHLL ALKSAGLTFPLPND NGGLVILLRMDT  PPEYGIKL++  +A++ DLRL V CSFSLGLPPGFVERLLARCCH+G P PFWRYGALIVG+GAE+GLFSLS++YSE+ K+LA+EV GG  EVHAWAALS VLSV IKMLSEFPGLPC   FFCP+HK KGM IRTT+
Sbjct:  822 RKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHMGYPFPFWRYGALIVGNGAEKGLFSLSVEYSEEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTD 1068          
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 7.730e-130
Identity = 193/247 (78.14%), Postives = 213/247 (86.23%), Query Frame = -2
Query:    2 RKWEGGLVEYGSFIFLDVEWFATVLDPLFCHKRDACGNIDLGGMRVTDVDSLDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFPLPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPHPFWRYGALIVGDGAEEGLFSLSLQYSEKRKLLAIEVSGGRTEVHAWAALSNVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKIRTTN 742
            RKWEGGLVEYG+++FLDVEWFATVLDPLF H+RD+ G+IDLGG+RVT++ SL R D EHVFEPQLA ELW PELAPHLL ALKSAGLTFPLPND NGGLVILLRMDT  PPEY I+ +EA+QA K+DL L V CSFSLGLPPGFVERLLARCCHLG P+PFWRYGALIVG+GAE+GLFSLSL YSE   +L +EV GG  EVHAWAALS VLSV IKMLSEFPGLPC   FFCP+HK KGM IRTT+
Sbjct:  729 RKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEKGLFSLSLDYSEHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTTD 975          
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 1.780e-117
Identity = 171/247 (69.23%), Postives = 200/247 (80.97%), Query Frame = -2
Query:    2 RKWEGGLVEYGSFIFLDVEWFATVLDPLFCHKRDACGNIDLGGMRVTDVDSLDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFPLPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPHPFWRYGALIVGDGAEEGLFSLSLQYSEKRKLLAIEVSGGRTEVHAWAALSNVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKIRTTN 742
            RKWEGGLVEYG++IFLDV WFA VLDPLF HK+D+ G I LGG  VT+ DSL R D  H+FEP+LA +LWG ELAPHLLSAL SAGLTFP+PND   GLV++LRMDT+PPP+Y   ++E      +DLRLVV+CSF LGLPPGFVERLLARCCHLG PHPFWRYGAL+VG GAEEG FSL+L+YSE+ K L ++V+G  +EVHAWA LS VLSVTIKMLSEFPGLPC+  F CPRH+ K M++   N
Sbjct:  337 RKWEGGLVEYGNYIFLDVGWFADVLDPLFSHKKDSNGIIYLGGKTVTNDDSLKRLDANHIFEPRLAEDLWGAELAPHLLSALNSAGLTFPIPNDPFEGLVVVLRMDTEPPPDYRTIVEEEQARKYYDLRLVVQCSFRLGLPPGFVERLLARCCHLGFPHPFWRYGALVVGAGAEEGKFSLTLEYSEEDKTLKVQVNGRCSEVHAWATLSKVLSVTIKMLSEFPGLPCQLEFLCPRHEDKSMRVLKAN 583          
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED3_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.690e-110
Identity = 160/244 (65.57%), Postives = 189/244 (77.46%), Query Frame = -2
Query:   14 RKWEGGLVEYGSFIFLDVEWFATVLDPLFCHKRDACGNIDLGGMRVT-DVDSLDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFPLPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPHPFWRYGALIVGDGAEEGLFSLSLQYSEKRKLLAIEVSGGRTEVHAWAALSNVLSVTIKMLSEFPGLPCRTTFFCPRHKRKGMKI 742
             KWEGGLVEYGS++FLDV+WFA VLDPLF HKR+  G+IDLGG  VT +V SL R D +H+FEP+LA ELWGP+LA HLL+ALKSAGLTFP+PND N GLVIL+RM  KPPP Y  KL++A  A K+DL+L+  C F LGLPPG +ER+LARCC LG P+PFWRYGALI G+G + G FS  L+YS++ KLL I V GGR +V AWA LS VLSV IKMLSE+ GLPC    FCP H+ K M I
Sbjct:    5 EKWEGGLVEYGSYVFLDVQWFAEVLDPLFSHKRNLYGSIDLGGRSVTKNVRSLRRLDNDHIFEPRLAEELWGPDLARHLLAALKSAGLTFPMPNDPNEGLVILVRMKDKPPPGYDTKLKQAIAARKYDLKLIFHCKFRLGLPPGLIERILARCCQLGHPYPFWRYGALISGEGGQ-GSFSADLRYSDENKLLEIVVHGGREKVDAWATLSKVLSVLIKMLSEYGGLPCEPQLFCPLHEEKSMPI 247          
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: G (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA7_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 5.090e-71
Identity = 127/195 (65.13%), Postives = 145/195 (74.36%), Query Frame = -2
Query:   83 LFCHKRDACGNIDLGGMRV-TDVDS-LDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFPLPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPHPFWRYGALIVGDGAEEGLFSLSLQYSEKRKLLAIEVSGGRTEVHAWAALSNVLSVTIKMLS 661
            L  HKRD  G+IDLGG+RV  D  + LDR D +HVFEP+LA  LW PELA HLL ALKSAGLTFPLP DSNGGLVI LRMDT   PEYGIKL++  +A++ DL+L V+CSFSLGLP GFVER LA+CCH+G P+PFWRYGALIV DG                K+LA+EV GG  EVHAWAALS VLSV IKML+
Sbjct:  379 LISHKRDLDGHIDLGGIRVPNDARARLDRLDRDHVFEPKLAEGLWSPELASHLLLALKSAGLTFPLPQDSNGGLVINLRMDTTRLPEYGIKLEQVHKASEPDLKLTVKCSFSLGLPLGFVERFLAQCCHVGYPYPFWRYGALIVDDGD---------------KILALEVFGGCEEVHAWAALSKVLSVVIKMLT 558          
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 2.770e-54
Identity = 108/238 (45.38%), Postives = 142/238 (59.66%), Query Frame = -2
Query:   35 WEGGLVEYGSFIFLDVEWFATVLDPLFCHKRDACGNIDLGGMRVTDVDSLDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFPLPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPHPFWRYGALIVGDGAEEGLFSLSLQYSEKRKLL----AIEVSGGRTEVHAWAALSNVLSVTIKMLSEFPGLPCRTTFFCPRH 736
            +EG LV YGSF+ +DV+W ATVL PL  HK  + G ++LGG+ V     ++R  ++ + EP+LA ELW P+   HLL AL SAGLTFP PND  GGLV+LLR+D   P + G  L +   ++  D ++V  C+   G PPGF+ERLL+ CC LG  + FWRYG LI         FS+ L+Y+E    L    +++  G       W ALS  LSV  KMLSEFPG+    T  CP H
Sbjct:  653 YEGSLVVYGSFVIVDVQWLATVLKPLCSHKDMSMGEVNLGGITVRPGPRVERLVKDGILEPKLAEELW-PDTWEHLLRALSSAGLTFPRPNDKEGGLVVLLRLDKDRPDDVGDILDDFRASH--DGQIVASCTLLQGAPPGFIERLLSTCCRLGSCNHFWRYGVLIQSRS-----FSVILEYAEDDDTLVGKFSVDAFGDSRTAGPWLALSGCLSVLSKMLSEFPGMDVEATLECPYH 882          
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 2.050e-41
Identity = 99/253 (39.13%), Postives = 136/253 (53.75%), Query Frame = -2
Query:   35 RKWEGGLVEYGSFIFLDVEWFATVLDPLFCHKRDAC--GNIDLGGMRVT--------DVDSLDRFDEEHVFEPQLATELWGPELAPHLLSALKSAGLTFPLPNDSNGGLVILLRMDTKPPPEYGIKLQEADQANKFDLRLVVECSFS----LGLPPGFVERLLARCCHLGLPHPFWRYGALIVGD-GAEEG--LFSLSLQYSEKRKLLAIEVSGGRTEVHAWAALSNVLSVTIKMLSEFPGLPCRTTFFCPRH 742
            R+++G LV +  F+FLDV W A +L PL  HK      G ++LG    T        D+ S DR  +E V EP+LA  +W   L+ ++L  L S G TFPL ND + GLV+LLR+    P   G  +      + F   L    S S    LG+PPG VE++L RCC LG+   FWRYG L+ G  GA++G   F++ L+YS     L  ++ G  +   AW ALS V+S    ML +FPGL  + +  CP H
Sbjct:  210 REFDGSLVRHEKFVFLDVVWLARILKPLLNHKDQETFDGRVNLGDTGDTPITLDDPSDIKSWDRLKKEGVLEPRLAYAMWPDGLSEYVLPTLASLGFTFPLENDPDEGLVVLLRLTPNRPESVGKVI------DTFCSGLTPAFSASWKIFLGVPPGAVEKVLTRCCGLGVVRTFWRYGVLVHGSFGAQDGRRTFAVVLEYSSTDNELTAKIFGDISTPAAWVALSYVMSAVKLMLMDFPGLRWKGSLKCPEH 456          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8866.16964.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
LRR-GTPase2.120e-14586.12of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Uncharacterized1.270e-13576.52protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.040e-13079.27protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
LRR-GTPase5.150e-13078.14of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
LRR-GTPase7.730e-13078.14of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Uncharacterized1.780e-11769.23protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.690e-11065.57protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
G5.090e-7165.13domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
LRR-GTPase2.770e-5445.38of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Uncharacterized2.050e-4139.13protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8866contigE_fasciculatus_S2_contig8866:178..920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start1
Model size743
Hectar predicted targeting categoryother localisation
Exons1
Cds size633
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842541.2067113-UTR-E_fasciculatus_S2_contig8866:177..1971696842541.2067113-UTR-E_fasciculatus_S2_contig8866:177..197Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8866 178..197 +
1696842541.2287045-UTR-E_fasciculatus_S2_contig8866:830..9201696842541.2287045-UTR-E_fasciculatus_S2_contig8866:830..920Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8866 831..920 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842541.218267-CDS-E_fasciculatus_S2_contig8866:197..8301696842541.218267-CDS-E_fasciculatus_S2_contig8866:197..830Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8866 198..830 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8866.16964.1prot_E_fasciculatus_S2_contig8866.16964.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8866 198..830 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8866.16964.1

>prot_E_fasciculatus_S2_contig8866.16964.1 ID=prot_E_fasciculatus_S2_contig8866.16964.1|Name=mRNA_E_fasciculatus_S2_contig8866.16964.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=211bp
MPFLLCRGQKNVVRHGKPGNSESILIVTERTLDRAAHAWTSVRPPDTSIA
RSLRFSEYCKLSENNPSSAPSPTIRAPYLQKGCGRPKWQHRARRRSTKPG
GNPRLNEHSTTSLRSNLLAWSASWSLIPYSGGGFVSMRNRITKPPLESFG
RGNVSPALFKAERRCGASSGPHSSVASCGSKTCSSSNRSKLSTSVTLMPP
RSMLPQASRL*
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mRNA from alignment at E_fasciculatus_S2_contig8866:178..920+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8866.16964.1 ID=mRNA_E_fasciculatus_S2_contig8866.16964.1|Name=mRNA_E_fasciculatus_S2_contig8866.16964.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=743bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8866:178..920+ (Ectocarpus fasciculatus EfasUO2)
CATTTGTTGTCCTGATCTTCATGCCCTTCCTCTTGTGCCGTGGGCAGAAA AACGTTGTCCGGCATGGTAAACCAGGAAACTCCGAGAGCATCTTGATCGT GACGGAGAGGACATTAGACAGGGCCGCCCACGCATGGACCTCCGTACGCC CCCCGGACACCTCGATCGCTAGGAGCTTACGCTTCTCAGAGTACTGCAAA CTCAGTGAAAACAACCCTTCTTCCGCGCCGTCACCCACTATCAGAGCCCC GTATCTCCAGAAGGGGTGCGGAAGGCCCAAGTGGCAGCACCGCGCCAGGA GACGCTCGACGAAGCCAGGAGGCAACCCTAGACTGAACGAGCATTCAACA ACAAGCCTCAGGTCGAACTTGTTAGCTTGGTCTGCTTCCTGGAGCTTGAT ACCATACTCAGGTGGGGGCTTCGTGTCCATGCGCAACAGGATAACCAAGC CCCCATTGGAGTCGTTCGGTAGGGGAAACGTCAGCCCTGCACTCTTCAAA GCCGAGAGAAGATGCGGTGCGAGCTCTGGACCCCACAGCTCTGTAGCGAG TTGCGGCTCAAAAACGTGTTCCTCGTCGAACCGGTCCAAGCTGTCAACGT CCGTCACCCTCATGCCACCAAGGTCGATGTTGCCGCAAGCATCTCGCTTG TGACAAAACAAGGGGTCCAGGACTGTTGCAAACCATTCCACGTCGAGGAA GATGAAGCTGCCGTATTCCACCAGTCCCCCCTCCCACTTCCTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8866:178..920+

>mRNA_E_fasciculatus_S2_contig8866.16964.1 ID=mRNA_E_fasciculatus_S2_contig8866.16964.1|Name=mRNA_E_fasciculatus_S2_contig8866.16964.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=633bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8866:178..920+ (Ectocarpus fasciculatus EfasUO2)
ATGCCCTTCCTCTTGTGCCGTGGGCAGAAAAACGTTGTCCGGCATGGTAA
ACCAGGAAACTCCGAGAGCATCTTGATCGTGACGGAGAGGACATTAGACA
GGGCCGCCCACGCATGGACCTCCGTACGCCCCCCGGACACCTCGATCGCT
AGGAGCTTACGCTTCTCAGAGTACTGCAAACTCAGTGAAAACAACCCTTC
TTCCGCGCCGTCACCCACTATCAGAGCCCCGTATCTCCAGAAGGGGTGCG
GAAGGCCCAAGTGGCAGCACCGCGCCAGGAGACGCTCGACGAAGCCAGGA
GGCAACCCTAGACTGAACGAGCATTCAACAACAAGCCTCAGGTCGAACTT
GTTAGCTTGGTCTGCTTCCTGGAGCTTGATACCATACTCAGGTGGGGGCT
TCGTGTCCATGCGCAACAGGATAACCAAGCCCCCATTGGAGTCGTTCGGT
AGGGGAAACGTCAGCCCTGCACTCTTCAAAGCCGAGAGAAGATGCGGTGC
GAGCTCTGGACCCCACAGCTCTGTAGCGAGTTGCGGCTCAAAAACGTGTT
CCTCGTCGAACCGGTCCAAGCTGTCAACGTCCGTCACCCTCATGCCACCA
AGGTCGATGTTGCCGCAAGCATCTCGCTTGTGA
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