mRNA_E_fasciculatus_S2_contig8854.16952.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI) HSP 1 Score: 279 bits (713), Expect = 1.030e-91 Identity = 139/197 (70.56%), Postives = 156/197 (79.19%), Query Frame = 3
Query: 27 PKYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTAHEDKQFDVICTVCDGAVPNSDRSFQKFFATSTFSKWANEESPSEMRHKDFKVAFRHPQHGRPVFNMSDPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTE--EWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFNRNSHNCMSVKLSAK 611
P YKFCV+REAV+GLTGPKL RML+++M LY AH DK FDVI TVCDGA + RSFQK+ A FS+WA +S E R DFKVAF+HP HG PVFNMSDPVHLLKKVVNALWHS + KQRDLK LW++ E EWVSFSLKTLE+VW +EEAGGG+RS AEQAAHL RF K +PEMF RNSHNCMSV LSAK
Sbjct: 67 PTYKFCVFREAVRGLTGPKLARMLDDIMTSLYQAHSDKNFDVIGTVCDGAAEH--RSFQKYLAEIAFSEWARGDSAFEKRMGDFKVAFKHPSHGGPVFNMSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEAAEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD6_9PHAE) HSP 1 Score: 256 bits (654), Expect = 5.450e-85 Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 3
Query: 261 MRHKDFKVAFRHPQHGRPVFNMSDPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEE--WVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFNRNSHNCMSVKLSAKVGECATRV 635
MRHKDFKVAFRHPQHGRPVFNMS+PVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEE WVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMF RNSHNCMSVKLSAKVGECATRV
Sbjct: 1 MRHKDFKVAFRHPQHGRPVFNMSEPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEEEEWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFYRNSHNCMSVKLSAKVGECATRV 127
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE) HSP 1 Score: 255 bits (652), Expect = 2.640e-76 Identity = 126/197 (63.96%), Postives = 153/197 (77.66%), Query Frame = 3
Query: 27 PKYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTAHEDKQFDVICTVCDGAVPNSDRSFQKFFATSTFSKWANEESPSEMRHKDFKVAFRHPQHGRPVFNMSDPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTE--EWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFNRNSHNCMSVKLSAK 611
PKYKFCVYREAV+GL+GPK+ RML+E+ +LY AHEDK+FDVI TVCDGA + RSFQ+ FAT+TFS+WA +S E RHKD+ VAF+HP H PVFNMSDPVHLLKKVVNALW+SGL K+R L+ LWW+P T+ E SFSLKTLE+ W +EE R+ AE+AA L RF K++ +R+SH CMSVKLSAK
Sbjct: 453 PKYKFCVYREAVRGLSGPKISRMLDEITNKLYEAHEDKKFDVIGTVCDGAAEH--RSFQQHFATTTFSEWAKSDSVFEQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLTDAPELASFSLKTLEKAWREEEGHRANRTAAERAATLRRFLKMDAACLDRDSHTCMSVKLSAK 647
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 250 bits (638), Expect = 7.830e-76 Identity = 132/204 (64.71%), Postives = 150/204 (73.53%), Query Frame = 3
Query: 27 PKYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTAHEDKQFDVICTVCDGAVPNSDRSFQKFFATSTFSKWANEESPSEMRHKDFKVAFRHPQHGRPVFNMSDPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEE--WVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFNRNSHNCMSVKLSAKVGECATR 632
PKYKFCVYREAV+GL+GPK+ RML+E+MLRLY AH DK+ DVI TVCDGA RSFQ ATSTF +WA+ +S E R DF +AF HP HG PVFNMS P HLL VVNALW+S L KQR LK L+W+ TEE WVSFSLKTLE VW EE GGG S AE A++L RF K PEM +RNSHNCMSV+LSAK C +R
Sbjct: 238 PKYKFCVYREAVRGLSGPKISRMLDEIMLRLYEAHPDKKIDVIGTVCDGA--GEHRSFQTKLATSTFGEWADPKSRLEERFADFPMAFNHPHHGEPVFNMSGPPHLLX-VVNALWYSSLPSKQRHLKNLFWNRDTEEFEWVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAK---CVSR 435
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 159 bits (402), Expect = 2.210e-41 Identity = 94/199 (47.24%), Postives = 118/199 (59.30%), Query Frame = 3
Query: 24 KPKYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTAHEDKQFDVICTVCDGAVPNSDRSFQKFFATSTFSKWANEESPSEMRHKDFKVAFRHPQHGRPVFNMSDPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEE--WVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFNRNSHNCMSVKLSAKV 614
KP+YKF V+REAV+ L+ ++RML VM L AH DK FDV+ T+CDGA + RSFQ A F W P E FKV F HP H VFNMSDP+H+LKK+VNALWHS + KQR L G+W +E + FSLKT + V+N E + E+ A L+ F + FNR + CM+VKLSAKV
Sbjct: 695 KPEYKFVVWREAVRSLSTDYIQRMLIRVMRYLAMAHPDKAFDVVATICDGAPEH--RSFQTHAAILGFCHWIK--GPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQL-GMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKV 888
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 158 bits (399), Expect = 5.780e-41 Identity = 95/199 (47.74%), Postives = 117/199 (58.79%), Query Frame = 3
Query: 24 KPKYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTAHEDKQFDVICTVCDGAVPNSDRSFQKFFATSTFSKWANEESPSEMRHKDFKVAFRHPQHGRPVFNMSDPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEE--WVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFNRNSHNCMSVKLSAKV 614
KP+YKF V+REAV+ L+ ++RML M L AH DK FDVI T CDGA + RSFQ A F W P E FKV F HP H VFNMSDP+H+LKK+VNALWHS + KQR L G+W +E + FSLKT + V+N E + E+AA L+ F + FNR + CM+VKLSAKV
Sbjct: 604 KPEYKFVVWREAVRSLSTDYIQRMLIRAMRYLAMAHPDKAFDVIATECDGAPEH--RSFQTHAAILGFCHWIK--GPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQL-GMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKV 797
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 113 bits (282), Expect = 2.530e-25 Identity = 68/153 (44.44%), Postives = 84/153 (54.90%), Query Frame = 3
Query: 162 VCDGAVPNSDRSFQKFFATSTFSKWANEESPSEMRHKDFKVAFRHPQHGRPVFNMSDPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEE--WVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFNRNSHNCMSVKLSAKV 614
V P RSFQ A S F +W P E FKV HP H VFNMSDP+H+LKK+VNALWHS + KQR L G+W +E + FSLKT + V+N E + E+AA L+ F + FNR + CM+VKLSAKV
Sbjct: 546 VAPSRTPLDSRSFQTHAAISGFCRWIK--GPQEGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQL-GMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKV 695
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQL9_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.750e-25 Identity = 52/58 (89.66%), Postives = 53/58 (91.38%), Query Frame = 3
Query: 30 KYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTAHEDKQFDVICTVCDGAVPNSDRSFQ 203
KYKFCVYREAVKGLTGPKLKRMLNEVMLRLYT HEDKQFDVICTVCDGA + RSFQ
Sbjct: 163 KYKFCVYREAVKGLTGPKLKRMLNEVMLRLYTVHEDKQFDVICTVCDGAAEH--RSFQ 218
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 108 bits (271), Expect = 7.570e-24 Identity = 58/115 (50.43%), Postives = 71/115 (61.74%), Query Frame = 3
Query: 276 FKVAFRHPQHGRPVFNMSDPVHLLKKVVNALWHSGLADKQRDLKGLWWDPK--TEEWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFNRNSHNCMSVKLSAKV 614
F VAF HP H P+FNMSDP H+LKK+ N WHS K+R+L +W + + V FSL T E V+NQ E G S E+ A ++ FRKV P FNRNS NCM+V SAKV
Sbjct: 368 FPVAFPHPVHLGPIFNMSDPPHILKKIANTCWHSDQDSKKREL-AMWCGDEEGNTDLVRFSLATAERVYNQVENDGNTLSQEEKVASITTFRKVVPSCFNRNSWNCMNVSYSAKV 481
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 8.610e-8 Identity = 44/133 (33.08%), Postives = 61/133 (45.86%), Query Frame = 3
Query: 36 KFCVYREAVKGLTGPKLKRMLNEVMLRLYTAHEDKQFDVICTVCDGAVPNSD-----------RSFQKFFATSTFSKWANEESPSEMRHKDFKVAFRHPQHGRPVFNMSDPVHLLKKVVNALWHSGLADKQRD 401
+FC+Y G+ G L EV+ + +H + G + ++ RSFQ AT FS +A + E +F VA RH H P+FN+SDP HL+KK+ N LWHS L RD
Sbjct: 257 RFCIY---YSGVAGTAAYNALREVLHLPFPSHIRHLREKAVPPGSGVLVDNIQMFFISLAKPVRSFQLRAATVEFSAFA--QGDDEESFSNFPVALRHSVHLGPMFNVSDPPHLVKKIANTLWHSDLTGAIRD 384 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8854.16952.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8854.16952.1 >prot_E_fasciculatus_S2_contig8854.16952.1 ID=prot_E_fasciculatus_S2_contig8854.16952.1|Name=mRNA_E_fasciculatus_S2_contig8854.16952.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=182bp MLNEVMLRLYTAHEDKQFDVICTVCDGAVPNSDRSFQKFFATSTFSKWANback to top mRNA from alignment at E_fasciculatus_S2_contig8854:214..1218- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8854.16952.1 ID=mRNA_E_fasciculatus_S2_contig8854.16952.1|Name=mRNA_E_fasciculatus_S2_contig8854.16952.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1005bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8854:214..1218- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8854:214..1218- >mRNA_E_fasciculatus_S2_contig8854.16952.1 ID=mRNA_E_fasciculatus_S2_contig8854.16952.1|Name=mRNA_E_fasciculatus_S2_contig8854.16952.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=546bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8854:214..1218- (Ectocarpus fasciculatus EfasUO2)back to top |