mRNA_E_fasciculatus_S2_contig88.16895.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig88.16895.1
Unique NamemRNA_E_fasciculatus_S2_contig88.16895.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: Imm (upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 417 bits (1073), Expect = 5.010e-143
Identity = 201/255 (78.82%), Postives = 230/255 (90.20%), Query Frame = 1
Query:    1 MARTAFAALAFGMLGAANALEMVSPMSGEEVAAGSAYTVEWTGTTDGRFDVDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTASGYKVMVTDASDESDMGCSDAFTLVAADDVPDALEAGAYVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVGGSGDCGTYITSVCDKESIGCKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSDSSMSMSMRF 765
            MARTAFAALAFGMLGAANALE+VSP +G+ V A SAYTVEWTG T GR+D+DLYYCGS+CM+ ECG+WVTALCPYGD+GCPDT+GDYD++MPEPMDGT+SGYKVMVTD+SDESD GCS  FTL+A+ + PDA + GAYV VTSPSDGDTAMAGGEYTVEFDYD+G G + NRFAIDLYS GGSGDCGTY+T++CDK SIGCKDSQGDYDV+IPSGTESGMYSIRVGVFE++ VYGCSDSFE+VG +S   MS+RF
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGDMVVADSAYTVEWTGATSGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVGGES---MSVRF 252          
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: GPI-anchored (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 6.440e-122
Identity = 181/255 (70.98%), Postives = 214/255 (83.92%), Query Frame = 1
Query:    1 MARTAFAALAFGMLGAANALEMVSPMSGEEVAAGSAYTVEWTGTTDGRFDVDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTASGYKVMVTDASDESDMGCSDAFTLVAADDVPDALEAGAYVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVGGSGDCGTYITSVCDKESIGCKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSDSSMSMSMRF 765
            MARTAFAA+AFGML AANALE+VSP  G  V A  AYTVEWTGTT GRF++DLYYC S CMD  CG+WVTALCPYG +GCPD+ GDYDI+MPEPM GT+SGYKVMV +A DESDMGCSD FTL+A++D P+A E G  + VTSPSDGDTAMAG  YTVE+DY++G G +T+RFA+DLY VGG+GDCGTY+T++CD+ SIGC DSQGDYDV IPS T +GMYSIRVGVF++E +Y CSD+FEV  SD  M++SMRF
Sbjct:    1 MARTAFAAVAFGMLSAANALEVVSPDGGISVLADRAYTVEWTGTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSSGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEVDTSDD-MTISMRF 254          
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: EsV-1-163 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 1.710e-119
Identity = 176/252 (69.84%), Postives = 210/252 (83.33%), Query Frame = 1
Query:    1 MARTAFAALAFGMLGAANALEMVSPMSGEEVAAGSAYTVEWTGTTDGRFDVDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTASGYKVMVTDASDESDMGCSDAFTLVAADDVPDALEAGAYVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVG-GSGDCGTYITSVCDKESIGCKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSDSSMSM 753
            MARTAFAALAFGMLGAANALE+VSP +G  V A   YTVEWTGT+D RF++DLYYCGS CM+ ECG+WVTALCPYG +GCPDT+GDYDI+MPEPM GT+SGYKV+VTD++DES MGCS  FTLVA+ D P A E G  + VTSPSDGDTAMAGG YTVE+DY++G G +T+RFAIDLYS G G+GDCGTY+ ++CDK SIGC DSQGDYDV IPS T +GMYS+RVGVF ++ ++ CS+ FE+V   + MSM
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGISVIADRTYTVEWTGTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSSGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVNDRTDMSM 252          
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 2.650e-113
Identity = 167/251 (66.53%), Postives = 197/251 (78.49%), Query Frame = 1
Query:    1 MARTAFAALAFGMLGAANALEMVSPMSGEEVAAGSAYTVEWTGTTDGRFDVDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTASGYKVMVTDASDESDMGCSDAFTLVAADDVPDALEAGAYVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVGGSGDCGTYITSVCDKESIGCKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSDSSMSM 753
            MARTAFAALAFGMLGA NALE+ SP +G+ + A S+ TVEWTGT+ GRFD+DLYYCGS+CM+ ECG+WVTALCPYGD+GCPDT+GDYD++MPEPMDGT+SGYKVMVTD+SDESDMGCS  FTLVA+                                 FD+D+G G + NRF+IDLY  GGSGDCGTY+TS+CDK SIGCKDSQGDYDV+IPS TESGMYSIRVGVFE+  V+GCSDSFE++G +SSMS+
Sbjct:    1 MARTAFAALAFGMLGAVNALEVTSPAAGDMIVAASSTTVEWTGTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSGYKVMVTDSSDESDMGCSGEFTLVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEIIGGESSMSV 251          
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 8.760e-108
Identity = 167/258 (64.73%), Postives = 202/258 (78.29%), Query Frame = 1
Query:    1 MARTAFAALAFGMLGAANALEMVSPMSGEEVAAGSAYTVEWTGT-TDGRFDVDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTA-SGYKVMVTDASDESDMGCSDAFTLVAADDVPDALEAGA-YVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVGGSGDCGTYITSVCDKESIGCKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSDSSMSMSMRF 765
            M RT F ALA GMLG A+ALE+V+P +G+ V +  AYTVEW+GT ++ RF++DLYYC SMCM+ ECGEWVTALCPYG++GCPD +GDYDI+MPEPM GT+ SGYKV V D  DE    CSD F L+A  D P A +AG  YV VTSPS GD+A AG EYTVEFDYD+G G +  RFAIDLY+  GSGDCGT++ ++CDK +IGCKDS GDYDV IP   E+GMY+IRVG FE+E+VYGCSD FE++G+D S SMS RF
Sbjct:    2 MVRTGFVALACGMLGVASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGADDS-SMSYRF 258          
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: EsV-1-163 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 3.290e-107
Identity = 161/248 (64.92%), Postives = 194/248 (78.23%), Query Frame = 1
Query:    1 MARTAFAALAFGMLGAANALEMVSPMSGEEVAAGSAYTVEWTGTTDGRFDVDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTA-SGYKVMVTDASDESDMGCSDAFTLVAADDVPDA-LEAGAYVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVGGSGDCGTYITSVCDKESIGCKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSD 738
            MART F ALA  MLGAANALE+V+P +   V A   YTVEWTG   GRF++DLY+CGSMCM+  CG+WVTALCPYG+EGCPD +GDYDI+MPEPM G + SGYKV V D SDE  M CSDAF L+A++D PDA  E+G ++ VTSP++GD+A AG EYTVEFDYD+G G   +RF+IDLY   G GDCGTY+TS+CDK SIGCKDS GDYDV IP+ TE+G Y IRVG FE+E +YGCS +F ++G D
Sbjct:    1 MARTGFVALACAMLGAANALEVVTPSADLIVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGGD 248          
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: EsV-1-163 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 1.720e-101
Identity = 154/239 (64.44%), Postives = 190/239 (79.50%), Query Frame = 1
Query:   37 MLGAANALEMVSPMSGEEVAAGSAYTVEWTGT-TDGRFDVDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTA-SGYKVMVTDASDESDMGCSDAFTLVAADDVPDALEAGA-YVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVGGSGDCGTYITSVCDKESIGCKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSDSS 744
            MLGAA+ALE+V+P  G+ V A  AYTVEWTGT ++ R+++DLYYCGSMCM+ ECG+WVTALCPYG++GCPD +GDYDI+MPEPM GT+ SGYKV V D  D+    CSD F L+A  + P A +AG  YV VTSPS GD+A AG EYTVEFDYD+G G +  RFAIDLYS  GSGDCGT++ ++CDK +IGCKDS GDYDV IP   E+GMY+IRVG FE+++VYGCSD FE++G+D S
Sbjct:    1 MLGAASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILGADDS 239          
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 1.420e-95
Identity = 151/251 (60.16%), Postives = 184/251 (73.31%), Query Frame = 1
Query:    1 MARTAFAALAFGMLGAANALEMVSPMSGEEVAAGSAYTVEWTGTT-DGRFDVDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTA-SGYKVMVTDASDESDMGCSDAFTLVAADDVPDAL-EAGAYVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVGGSGDCGTYITSVCDKESIGCKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSDSS 744
            M RT F ALA GMLGAANAL++ +P  G  V A   YTVEWTGT+ D RF++DLYYCGSMCM+ +CG+WVTALCPYG++GCPD +GDYDI+MPEPM GT+ SGYKV V D  DE D  CSD F L+A+ + P    E G  + VTSP+ GD A   GEYTVEFDYD+G G + +RFAIDLY   G GDCGTY+ S+CDK +IGCKDS GDYDV IP  T++G Y IRV  FE++++Y CS +F +   D S
Sbjct:    1 MTRTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTIEEGDDS 251          
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR87_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 9.890e-82
Identity = 124/192 (64.58%), Postives = 157/192 (81.77%), Query Frame = 1
Query:  181 MDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTASGYKVMVTDASDESDMGCSDAFTLVAADDVPDALEAGAYVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVG-GSGDCGTYITSVCDKESIGCKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSDSSMSM 753
            M+ +CG+WVTALCPYG +GCPDT+GDYDI+MPEPMDGT+SGYK+MVTD++DES MGCS  FTLVA+ D P A E G  + V SPSDGD AMAG  YTVE+DY++G G + +RFAIDLY+ G G+GDCGTY+ ++CDK +IGC DSQGDYDV IPS T +GMYS+RVGVF +E ++ CS++FE+V   + +SM
Sbjct:    1 MEDDCGDWVTALCPYGADGCPDTQGDYDIVMPEPMDGTSSGYKIMVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVNSPSDGDIAMAGEVYTVEWDYNNGLGSSKDRFAIDLYTYGTGTGDCGTYVATLCDKPTIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDEIMFDCSEAFEIVNDSTDLSM 192          
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Match: Imm (downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.810e-81
Identity = 137/232 (59.05%), Postives = 165/232 (71.12%), Query Frame = 1
Query:    1 MARTAFAALAFGMLGAANALEMVSPMSGEEVAAGSAYTVEWTGTT-DGRFDVDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTA-SGYKVMVTDASDESDMGCSDAFTLVAADDVPDAL-EAGAYVMVTSPSDGDTAMAGGEYTVEFDYDDGSGGTTNRFAIDLYSVGGSGDCGTYITSVCDKESIGCKDS----QGDYDVIIPSGTESGMYSIRV 675
            MART F ALA GMLGAANAL++ +P  G  V A   YTVEWTGT+ D RF++DLYYCGSMCM+ +CG+WVTALCPYG++GCPD +GDYDI+MPEPM GT+ SGYKV V D  DE D  CSD F L+A+ + P    E G  + VTSP+ GD A   GEYTVEFDYD+G G   +RFAIDLY   G GDCGTY+ S+CDK +IGCKDS    +G + V    G   G +S+ V
Sbjct:    2 MARTGFVALACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDSNPVRRGRWRVQDSGGPLRGRFSLLV 233          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig88.16895.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
Imm5.010e-14378.82upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
GPI-anchored6.440e-12270.98domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
EsV-1-1631.710e-11969.84n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized2.650e-11366.53protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.760e-10864.73protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
EsV-1-1633.290e-10764.92n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI[more]
EsV-1-1631.720e-10164.44n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
Uncharacterized1.420e-9560.16protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized9.890e-8264.58protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Imm1.810e-8159.05downregulated 8 n=1 Tax=Ectocarpus siliculosus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig88contigE_fasciculatus_S2_contig88:39983..44882 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start1
Model size1346
Hectar predicted targeting categorysignal peptide
Exons6
Ec32 ortholog descriptionSecreted protein similar to EsV-1-163
Ec32 orthologEc-00_006570.1
Cds size768
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig88.16895.1prot_E_fasciculatus_S2_contig88.16895.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig88 39983..44304 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842535.1109478-CDS-E_fasciculatus_S2_contig88:39982..400861696842535.1109478-CDS-E_fasciculatus_S2_contig88:39982..40086Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig88 39983..40086 +
1696842535.1223664-CDS-E_fasciculatus_S2_contig88:42225..423071696842535.1223664-CDS-E_fasciculatus_S2_contig88:42225..42307Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig88 42226..42307 +
1696842535.1329648-CDS-E_fasciculatus_S2_contig88:42558..426811696842535.1329648-CDS-E_fasciculatus_S2_contig88:42558..42681Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig88 42559..42681 +
1696842535.1514218-CDS-E_fasciculatus_S2_contig88:43082..432501696842535.1514218-CDS-E_fasciculatus_S2_contig88:43082..43250Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig88 43083..43250 +
1696842535.166664-CDS-E_fasciculatus_S2_contig88:43662..437981696842535.166664-CDS-E_fasciculatus_S2_contig88:43662..43798Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig88 43663..43798 +
1696842535.177968-CDS-E_fasciculatus_S2_contig88:44149..443041696842535.177968-CDS-E_fasciculatus_S2_contig88:44149..44304Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig88 44150..44304 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842535.1874056-UTR-E_fasciculatus_S2_contig88:44304..448821696842535.1874056-UTR-E_fasciculatus_S2_contig88:44304..44882Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig88 44305..44882 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig88.16895.1

>prot_E_fasciculatus_S2_contig88.16895.1 ID=prot_E_fasciculatus_S2_contig88.16895.1|Name=mRNA_E_fasciculatus_S2_contig88.16895.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=256bp
MARTAFAALAFGMLGAANALEMVSPMSGEEVAAGSAYTVEWTGTTDGRFD
VDLYYCGSMCMDGECGEWVTALCPYGDEGCPDTKGDYDIMMPEPMDGTAS
GYKVMVTDASDESDMGCSDAFTLVAADDVPDALEAGAYVMVTSPSDGDTA
MAGGEYTVEFDYDDGSGGTTNRFAIDLYSVGGSGDCGTYITSVCDKESIG
CKDSQGDYDVIIPSGTESGMYSIRVGVFENEAVYGCSDSFEVVGSDSSMS
MSMRF*
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mRNA from alignment at E_fasciculatus_S2_contig88:39983..44882+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig88.16895.1 ID=mRNA_E_fasciculatus_S2_contig88.16895.1|Name=mRNA_E_fasciculatus_S2_contig88.16895.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4900bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig88:39983..44882+ (Ectocarpus fasciculatus EfasUO2)
ATGGCTCGCACTGCTTTCGCTGCCCTGGCCTTCGGCATGCTCGGCGCCGC CAACGCGTTGGAGATGGTCTCGCCCATGTCCGGGGAGGAGGTGGCCGCTG GCAGGTGAGAGCGACGAGAGCAACAAAGCGAGAAGTAGGACACGAGAGGG AAACACACCCACACCAACAGCAAGGCGTCGCCTCTCGTGTGTGTATACAG CCGCAGCAGCAGACAGTCGTGAGAGGAGGATCCGGAGTCAGTCCCTCTCA GTGTTTCTTTTTCTTCCAATCTGTCGAACAAAACGGGGTCGCGAATAGTC TAATAGTAAATGCGTAGGAAGAACCACACATGTCACGTTCTCTGCTGTAG GCGGAGATACTCTGTTCCGCAGCAGCGAGAGCCAAGTGCCCAAGAGCCCA TGGCGCGCTTAAACCGTTCTTGAGGCAATGCCTTTCTGCCAGGCAAACGC GTTCGTTCACTGCTCACTTTTCTCGTGGAGCAGGTCCGATTCTTCGAGCC GTGGTCCTCCCTATTGATAAGTTATTTTCTCTGGGACGAACGTGTCGACA TTTCATCATCATTCCCCAGTGTCGACATTTATTTTTTCCGCAGTCGTTGG CGCGCTCTCCGCGTCCCTGTATTTTGTGTGGTATCTCAGCACGCGCGCAC ACGCACACCCAATGCGAACAAGACGACAGGGACGAATGCGTTATGTTGGC CTCGTTCTCGCTCGGTAGCTGCTTCTCGGCAGAGAACGGAGCAAAACCCT AGACTCCCTCTCTGATGTGGTGGTTTTTTTTCGAAGAAAACATCTGTCGT CGGATTTCGATTCGGACTCGAACATTGGGGGTGGCAGGAATGGGTGGATC TACACACACATAGTCTATCCGTCCTGCGCCACATTCAATTACAAATTATA GGAGCGGTCGATGGAGATGATAAGGACGCGAGCTACCGAGATCTAAAAGC AGGCGCATGATGTAGGCGCGCCCCATCGTAATTTAGTTTGTGTACAGAGT ACTACTCACGATCGTGCGATACGCACACTTGTGCAACAGCGTAAGAACGA TCCACCCAACAGCATGGGCACATAAAACACCATCGAACGCGCCTTTCCGA GGCGGGCCCGCTCGTTGCGTTCTCGATACATGCCAATTTCCCTGAAGCCG CGCGCGAGTGCTTGCCCCGTGTACCCTGTTGTTCCGTTTGCTCCATAGTC GCGCGTGTACACTTCATTAATCATTGCCTTGTATCTACTAGCCACCCACC ACGAATCACCTTTCCTCCGTGCTTTCTTTATTGATATTTTTGTTCTTGAA TGTTGTACCGTCACATCGAATCTATCTGTTATCCTTAGGGAAGGGTCCAG GAAAGAACTCAAAAGCGTTAGCGCCACCTCGTTTGTACGATGCTCCGAAG CAGCATAGTCTAGTCTATGGCGATTTTATACTGTAAGCAGCAGTACCCTG GACCGATTTTCGCATGTACACCCCGTTCCTGAAGTTCCAAATCGAAGTTT ATGCCCATGCATGTACGTGCGTTGTTGTTGCCTCTTGCTGGTATGCATGT GGAAGCATTTTCACGATGTTGTTGTTTCATCTCCTTTCACAAATGAGATG CCAAAATAAGTTCTTAGCAATGAGGATCAAACCTTCGGCGAGTGTCCACT CCTGTACCACAGCTACATGTCCCTGTTCTGAACAGCATCCATGCTGGCAC TACTGGGCGCCCTCTACTTGTGTTGTTCCGCAAGCGGCACATGGTGATAT TCATCTACATACCTTTCCAGCGGTGAAGAACATGGTCTACCGATACGGCT ATTAGACTACAATACTTGTTTTGAAAGATGCCACCACAAATGCATCTGCA GCAGTCGTGGCTCCGATATACGAGGGTTTTGTCATACCACGCCACCCTTT TCTCTTCTATCGGAGGGAGCCACGACTCTGTACAGCAGTAAATAGTGGGG CGAGCTCTCGAGTTGGTTGATTTGTGCCGGGGTTGTTTTTGGCTGCCAAG AGACTGAATCACCAATATTCATCCGGTATATACTTCCCGTAAAGTGCCGG CTTCCCCGTAACTACGGATTTATCTTGATGTGTCACTCGATGTGATGCAA AAAGTTGTCGGAGCGTAGAAAACTTTCCGCCAGCCTCCGTTACCAGCGAC CGCACGAGCGGGTCTCACACATGTCATGTTTTCATCAACACTGACCGTCT TGTGCTTTGCCCTTTTTTTCTCTCGGATGTGTCTTGTTGGCAGTGCATAC ACCGTTGAGTGGACCGGCACCACCGACGGGCGCTTCGACGTCGACCTCTA CTACTGCGGCTCCATGTGCATGGATGTACGTAGCATACACTACTGCTGTT GTGATATTGCGCGCCTCATCATCCTGCCGCCACTAAGGTTGGCTGAAACA AAATGCGCCGCGTTCCCTGTGTCGTATCTCTCAAGATTCCGTCTTGTCTT ATATTTGTTCGAATCAGGCTGTCGAGCCAGCCTTCTTCTTGTGCCCATGT CCGACGCCCTATTGAGCACTTCCCCCCCCCCCGTCGCGCCCTCCACCAAC GACCGCACCGCGTCTCTGTTTGACAGGGCGAGTGCGGTGAGTGGGTGACC GCCCTTTGCCCCTACGGCGACGAGGGTTGCCCCGACACCAAGGGTGACTA TGACATCATGATGCCCGAGCCCATGGATGGTACCGCCAGCGGCTACAAGG TATGCTTCATGTGTGCGCGTGTGTCTGCAAGAGTAGGGGAGACGGACGAA GAACACGGTACGTCGTGAACCGCATCGATTCGATTGACCATTGAACCATA CCATACGTGGGAGAACGACCCCCGAGATTCAGATGGCAAATCCACGCGGG GTGCGGCTGGAGACCAAAAACAGTACGGTGCGAAGCGCCTCGTTTCTTTC GTTCGTCCACAAGGAAACGTGTTACACACTCACTCTCCTAGGCGCATGTT TTCACTCCCCTGTTATACAGGCGTACCACGGCGGTGTTAACAAACAGTTT TTGGTGGGGCCGTTCTAAATACCCACTCGAAACCAGACGGGGTCCGCCCA AATGTGGTTGGCTTGACAACGTGCTGGTCTTCCTCACCCCGACCTCTCAG GTGATGGTGACTGACGCCAGTGACGAGTCCGACATGGGCTGCTCCGACGC GTTCACCCTGGTCGCGGCCGACGATGTGCCCGACGCCCTCGAGGCGGGAG CCTACGTCATGGTCACTTCTCCCTCGGACGGCGATACCGCCATGGCTGGC GGGGAGTACACCGTTGAGGTGAGGCTGAGTATGCTACTTACATGGATGTG TATCTCTCCGGAGAGGACACTTGACATCACGAAAGCTATGCCTATGTATC CGCTCCTTGAACACTCTCAAACGCGAGGATACATACGCTTCAAAGTCGTG CTGGTATATTGTAACAACGCTTCTTATTGTGTGTCTGTGTTGTCGTCTGC CCCAAGTGCCCGCATGGGGTGAACACATGGCATTTCTCATCTGTTGGTTC TCTCATGCATGTGCTGTGACGTTGTGGTCACATGAGATCATCGCTGGCTT CCATTCCACTCCCGTTGGGTCTTGCGTTCGAGAGACGAGAAAACGCCACA CGGGTCACGCCACCCTCTTTCGCTCACCCCGAAACACTTGCGCTTTTTCA CCCTGCCCTGCTGCTTCGAACGTGAACAAGTTCGACTACGACGACGGCTC TGGCGGCACCACCAACCGGTTCGCTATCGACCTCTACTCGGTCGGTGGCT CCGGTGACTGCGGAACCTACATCACCAGCGTCTGCGACAAGGAGAGCATC GGCTGCAAGGACTCGCGTACGTACCCCCGTGTTTTATTTGGCGTTGCTCG TGTATACTCGAGAGCAGTAGTTGCTTTGCTTAAGAGTTCCATGTGCTTGG AAAAGTGGTTTTTGACACCCGTGTGACTGCATGGGCCCTTCGTACTTTCC GAAGAGGGAAACGATTTGGCAAGGAGACAACGTGGACCCGTCGCCGCCGC CCCCCCTTCCACTCTCGAATGGCCACTCCTGTGTTCGTGTTTGTTTTTGT GCCACAGCAGTTACTAGTTAACCAGACTCACCCAACCTCCCCCCCCCCCA ACCCCCACCCCTCTCCGGCGCTGTATTTTTTCCTCGGCTCTTTTTTTGCC CGGACTCCTCTCATCAGAGGGCGACTACGACGTAATTATCCCCTCGGGCA CCGAATCCGGCATGTACTCCATCCGAGTTGGCGTCTTCGAGAACGAGGCC GTGTACGGCTGCTCCGACTCTTTCGAGGTCGTCGGCAGCGACAGCAGCAT GAGCATGTCGATGCGCTTCTAAGAGAACCGCCCTGTCCATGATTCTTCTA ATGGGCCTCCTTCGAAATTTCAGCTGAAAAGAATGACCGACTGACTTCCG TCGTTTGCGTTCTGTGTTGGTAGAAAATCGAGAGTTGAGGGCTTGTTTGA TGCACAAGATGCTTCTTGTCTGGTTGAATGATGCGAGTGTGAGAAAGAGC GGGTGGGACATTGAAGAAGATGTAGAGCAATGCGCGATACAAAACGTAAG GTTAGGAACCTGTAGGTGCTCCGTTGACTAGTAACTTTTATTTTTTGGGT GCCCTTCCCACTTTATCTTCTTTTCGTGCGTGTAGTTTGTTCCGGTATTA CTCTTGCCCCCTCCCCTCCCACGGCTTTGGTCTTCTTGCTTGGTGTCATG TTGATCGTGTCGAGGTATTGTTCCTCCACCACCGCACTGCTGTGGGCACA ACCGGTACGGGGGAGGAGGGAGGGGTGCATTTGCACCGTACAATAGTCTA TCGGAATTATCTCTTGTTTATCTTGACTTGATTTTGTCTCTTGGGACTTG AACGATGCTTTAGGCGGAGGACAAGTGAAGGTTAACAAGGTTGTAACGAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig88:39983..44882+

>mRNA_E_fasciculatus_S2_contig88.16895.1 ID=mRNA_E_fasciculatus_S2_contig88.16895.1|Name=mRNA_E_fasciculatus_S2_contig88.16895.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=768bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig88:39983..44882+ (Ectocarpus fasciculatus EfasUO2)
ATGGCTCGCACTGCTTTCGCTGCCCTGGCCTTCGGCATGCTCGGCGCCGC
CAACGCGTTGGAGATGGTCTCGCCCATGTCCGGGGAGGAGGTGGCCGCTG
GCAGTGCATACACCGTTGAGTGGACCGGCACCACCGACGGGCGCTTCGAC
GTCGACCTCTACTACTGCGGCTCCATGTGCATGGATGGCGAGTGCGGTGA
GTGGGTGACCGCCCTTTGCCCCTACGGCGACGAGGGTTGCCCCGACACCA
AGGGTGACTATGACATCATGATGCCCGAGCCCATGGATGGTACCGCCAGC
GGCTACAAGGTGATGGTGACTGACGCCAGTGACGAGTCCGACATGGGCTG
CTCCGACGCGTTCACCCTGGTCGCGGCCGACGATGTGCCCGACGCCCTCG
AGGCGGGAGCCTACGTCATGGTCACTTCTCCCTCGGACGGCGATACCGCC
ATGGCTGGCGGGGAGTACACCGTTGAGTTCGACTACGACGACGGCTCTGG
CGGCACCACCAACCGGTTCGCTATCGACCTCTACTCGGTCGGTGGCTCCG
GTGACTGCGGAACCTACATCACCAGCGTCTGCGACAAGGAGAGCATCGGC
TGCAAGGACTCGCAGGGCGACTACGACGTAATTATCCCCTCGGGCACCGA
ATCCGGCATGTACTCCATCCGAGTTGGCGTCTTCGAGAACGAGGCCGTGT
ACGGCTGCTCCGACTCTTTCGAGGTCGTCGGCAGCGACAGCAGCATGAGC
ATGTCGATGCGCTTCTAA
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