mRNA_E_fasciculatus_S2_contig878.16876.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: UDP-galactose (translocator, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG8_ECTSI) HSP 1 Score: 599 bits (1544), Expect = 4.200e-212 Identity = 315/342 (92.11%), Postives = 320/342 (93.57%), Query Frame = 1
Query: 1 MGGTRQDPGSVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEKML 1026
MGG +DPGSVSRKGR FMG+LALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTK+ LCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLL DSKAGT ERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRN+SQLSLELAVYGVLTLLLTSGSGIGGSDAVT AGRSSAFQGWT WTC+PVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVT AVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEKML
Sbjct: 1 MGGAERDPGSVSRKGRIFMGMLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKITLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLLAAALLLNSGSSGGDSKAGTGERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNSSQLSLELAVYGVLTLLLTSGSGIGGSDAVTSAGRSSAFQGWTKWTCVPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTAAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEKML 342
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Putative (UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE8_9STRA) HSP 1 Score: 295 bits (755), Expect = 6.070e-93 Identity = 171/334 (51.20%), Postives = 234/334 (70.06%), Query Frame = 1
Query: 4 GGTRQDPGSVS-RKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLW-LGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQ 999
GG RQ +++ R+G FM +LALQ+GLQP++QK+C+D+H+V+++SL++ TE+TK+ +C I S+ V + +WTLR S++AAALPAA YALQNWL+Q+ YMNLDSLTFNLLNQTKTL AA+CL+L+MG++QS Q++AL +L ++++G GL + A S W LG+LPV+ A+L+SG AVTQ++LQ GRN+ LS ELAVYGVLTLLL S + G + ++GWT+ T IPV++ A GG+IVGQVTKHAGSV+KGFALIGGILVT A Q +E+ L+ H+ +A LVA T+LH +P Q
Sbjct: 7 GGERQSSEAINPRRGYVFMALLALQYGLQPLIQKSCIDRHAVNKVSLVVATEITKIAMCCGFILSTTGLVSE-LRATWTLRSSVKAAALPAACYALQNWLTQIGYMNLDSLTFNLLNQTKTLSAAVCLFLIMGRRQSGPQVLALMMLVAAALLL-------NAQSG----GLGDAAAPIS---WELGILPVVGASLLSGFSAAVTQKSLQERGRNSFLLSAELAVYGVLTLLLPSAASTGSLQGL--------WEGWTIRTVIPVVTNAMGGVIVGQVTKHAGSVKKGFALIGGILVTAAAQFILERQPLSREHYASAVLVAVSTFLHTRYPQQ 317
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Putative (UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG2_9STRA) HSP 1 Score: 294 bits (753), Expect = 6.720e-93 Identity = 167/317 (52.68%), Postives = 226/317 (71.29%), Query Frame = 1
Query: 55 MGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLW-LGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAG--RSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPH 996
M +LALQFGLQP++QK+C+++ V+R+SL++ TE+TK+ +C+ V+ SSG + SWTL+ S++AAALPAA YALQNWL Q+AYMNLDSLT+NLLNQTKTL AALCLY+VMG++QS Q+VAL++L +S+ + + G S W LGV+PVM A+L+SG AVTQ++LQ GRN+ LS EL +YG++TLL+T+ + GG V G R ++GWT WTC+PV +QAAGG++VGQVTKHAGSV+KGFAL+GGILVT A Q +E+ L+ H+ +A LVA T LHA +P+
Sbjct: 1 MLLLALQFGLQPLVQKSCINREEVNRVSLVMATELTKVAICLSVMVSSG--FLADIQSSWTLKSSMKAAALPAALYALQNWLIQIAYMNLDSLTYNLLNQTKTLSAALCLYVVMGRRQSGPQIVALAMLVAAALLL-------NSRTASDKDGA-------SGISWELGVVPVMGASLLSGFSAAVTQKSLQERGRNSYLLSAELGLYGIVTLLVTTLAAEGGVQ-VRRGGMLRDGLWRGWTPWTCLPVFTQAAGGVVVGQVTKHAGSVKKGFALVGGILVTAAAQYVLEREPLSPEHYVSAVLVALSTVLHARYPY 300
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Nucleotide-sugar (transporter n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR3_9STRA) HSP 1 Score: 219 bits (559), Expect = 4.030e-63 Identity = 144/327 (44.04%), Postives = 198/327 (60.55%), Query Frame = 1
Query: 25 GSVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPML-ESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGS----GIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANF 990
GSV + G F+M +LALQFGLQP+L +A + S+ +M +++ TE K++LC +W + +K R L +WT+R SL AALPA+ YALQN ++Q Y LDSL+FNLLNQTKTL AA+CLY+VMG+KQ+ LQLVAL +L S S + D LGVLPV+ A+L SG+ A+TQ+TLQ + RN+ S ELA+YG + L + S G+ +++L S +PV+ AAGG+IVG VTK+AG V+KGFALI GI +T QS M+++ + H AA LV T+LHA +
Sbjct: 49 GSVFQSGYFYMSLLALQFGLQPLLVRAFIPT-SLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASPAS-----------SPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSLSLPKNLSPLA------LLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKY 357
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAC1_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.300e-57 Identity = 137/328 (41.77%), Postives = 191/328 (58.23%), Query Frame = 1
Query: 64 LALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGS------KVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLW--LGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTS-GSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEK 1020
LALQFGLQP L K + K V + S++++TE TK+VLC+ + G + R + +SW+LR +L +PA Y++QN L Q Y LD+LTFNLLNQ KT+FAA+CL+LV+GK+QS LQ+VAL +L D+ EA S W LG LPV+ A+L+SG A TQ+ L RN+ S+ELAV G+++LL SG+ G + + + G + +PVLS AAGG++VG V K+AG V+KGF L+ GIL T VQS +E +++T + A+ LV G YLH N+P + P P K
Sbjct: 12 LALQFGLQPFLSKRYIGKD-VLKPSVVMLTESTKIVLCLTCLLVEGLLQKQRFQNLRDIAKSWSLRNALYCVVVPAVLYSIQNILVQSGYQYLDALTFNLLNQCKTIFAAVCLFLVLGKRQSFLQVVALLMLVTAAIILNLDKVGGDA------------EAVASRDEWFQLGFLPVLLASLISGFTTAFTQKILTEK-RNSYLFSMELAVIGIISLLAKELSSGVEGQEVLRTGNIAPLLVGMDAYVMLPVLSSAAGGIVVGLVVKYAGGVRKGFGLVLGILFTGLVQSIVEGTSITGLQYAASGLVVGSMYLHTNYPWK-PVAPAK 324
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: ROCK1 (protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JLU5_9DINO) HSP 1 Score: 195 bits (495), Expect = 8.070e-54 Identity = 125/315 (39.68%), Postives = 188/315 (59.68%), Query Frame = 1
Query: 52 FMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRS-GRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFP 993
F+ +LA QFGLQP+L K + + V ++ L+ ++ + +++ + + SW+LR S+ A LPA +++Q WL Q+ ++DSL+FNLLNQTKTL AAL YL++GK+QSR+Q AL LL +K + + T+ A+ + GVLPV+ AAL SGL A+TQRTL+ + GRN+ S+EL+++G LL +G+ S +QGW+ + +PV++QA GG++VG VTK++ SV+KGFAL+ GI++T Q+ +E + LT H AA LVA T LHA FP
Sbjct: 57 FLVLLAAQFGLQPLLTKQLLPRGHVPQVFLLSSNFSKILISLLILLFGNTRDEVADIARSWSLRESVLKAGLPAIMFSMQGWLLQVGQAHIDSLSFNLLNQTKTLSAALMCYLLLGKRQSRVQCFALVLLFVSALLLG-------TKGFSSKSSRDTAGADAGDAFFFGVLPVVTAALSSGLTAAMTQRTLKGAQGRNSWLYSMELSMWGSACLL----AGVCFSSDARGRLVQGPYQGWSALSVLPVMTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQAVLEDAPLTSGHLIAAVLVAISTVLHAEFP 360
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Uncharacterized (protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PUK5_PEROL) HSP 1 Score: 194 bits (494), Expect = 1.020e-53 Identity = 129/331 (38.97%), Postives = 190/331 (57.40%), Query Frame = 1
Query: 28 SVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEK 1020
++S KG F+M +LALQ+G QP++ + S+ +++ +TE+ K L + ++++ GS L+ WTLRGS AAALPA Y+LQN Q+A+ NLD L +NL+NQTK L AL YL +GK+QSR QL+AL +L +A E E +ARL G++ V+AA+ +SG+ ++++ LQ RN+ S ELAVY V+ + G AV A Q WTM IP+ + A GG+ VGQVTK+AGSVQKGF++I GI+ T ++S + LTM +A L A TY++A +P++ + K
Sbjct: 57 AISPKGLFYMALLALQYGSQPLITTTFTPR-SIPSSAIVTITEIVKFFLAIGLMFAEGSA--SSALQGWTLRGSFLAAALPAMSYSLQNICIQIAFQNLDPLVYNLVNQTKLLSTALLTYLFLGKRQSRHQLIALGMLFIAAVMISVGQASEPPEA----------EGERNARL--GLICVLAASALSGVGASISELALQTYSRNSFLFSAELAVYSVIAISTGELFKDGHLPAV-----GQALQTWTM--LIPIFTAAMGGIFVGQVTKYAGSVQKGFSIIAGIIFTAFLRSVILSKPLTMELILSAPLTAVATYMYAKYPYKAQVQSSK 365
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: ROCK1 (protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812QLI2_9DINO) HSP 1 Score: 192 bits (489), Expect = 5.880e-53 Identity = 127/318 (39.94%), Postives = 193/318 (60.69%), Query Frame = 1
Query: 52 FMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSK-VYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRS-GRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGR--SSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFP 993
F+ +LA QFGLQP+L K + + + ++ L+ + +K+++ +F++ ++ ++ +W+LR S+ A +PA +++Q WL Q+ ++DSL+FNLLNQTKTL AAL YL++G++QSR+Q AL LL K R+ A D+ GVLPV+ AAL SGL A+TQRTL+ S GRN+ S+EL+++G L+ +G+ SD GR +QGW+ + +PVL+QA GG++VG VTK++ SV+KGFAL+ GI++T Q +E + LT H AA LVA T LHA +P
Sbjct: 57 FLVLLAAQFGLQPLLSKQLLPRGHLPQVFLLS-SNFSKILISLFILMFGNTRDEIADIVRAWSLRESILKAGIPAIMFSMQGWLLQVGQAHVDSLSFNLLNQTKTLSAALMCYLLLGRRQSRIQCFALVLLFVSALLLGTKGCSSFKKHSARD-----GSASDA--FVFGVLPVVVAALSSGLTAAMTQRTLKGSAGRNSWLYSMELSMWGSACLI----AGVCISDK---RGRLLQGPYQGWSALSVVPVLTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQCVLEDAPLTSWHLIAAVLVAISTVLHAQYP 359
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EVQ2_9STRA) HSP 1 Score: 193 bits (490), Expect = 8.750e-53 Identity = 133/343 (38.78%), Postives = 199/343 (58.02%), Query Frame = 1
Query: 52 FMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDS-KAGTRERGLLTSEAEDSAR-LWLGVLPVMAAALMSGLMGAVTQRTLQRSG-RNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKS-ALTMTHWTAAALVAGGTYLHANFPHQGPK-----KPEKML*--SHRVYI 1047
+MG+LA+Q+G+QP+L K V+R S+++V E+ K + ++ SG + ++SW++ + A +PA Y +QN + LA NLD++T+N+LNQTKTL AALC YLVMG+KQS++Q+VAL LL A + E E S++ L GV PV+ A+ +SGL GA++Q+ LQ S RN+ ++EL + + L++TS + G S + T F+ WT T IP+L+ AAGG++VG VTKHAGSV+KGFALI G+L++ +Q+T++ L H L + YLH P+ P K EK + S RV+I
Sbjct: 20 YMGLLAVQYGIQPILTKEFTSSD-VERKSVVLVQEVVKFAMAGSMLLMSGGG--KAAIQSWSVTSWISVALVPAGLYCIQNLSALLACQNLDAVTYNVLNQTKTLSAALCCYLVMGRKQSKMQIVALLLLLLSALVLEKIVNLDFLLSASSEEEDASDKTVEVSSKHLTHGVAPVLLASFLSGLAGALSQKNLQGSNSRNSYFFTMELCMATTIMLVITSLASSGSSSSPTN------FEHWTPTTIIPILTNAAGGILVGLVTKHAGSVKKGFALIFGLLISGILQATLKSDDGLQKEHIIGGILASISLYLHGTNPYVAPPTTADAKKEKRINAFSFRVFI 353
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRP3_9STRA) HSP 1 Score: 187 bits (476), Expect = 3.020e-51 Identity = 128/337 (37.98%), Postives = 190/337 (56.38%), Query Frame = 1
Query: 25 GSVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVL--CVFVIWSS----GSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVAL------SLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSG-RNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPH 996
G ++ K F+M +LA+QFGLQP+L + + S D ++IV E +K++L + I S+ G + + W+++ A +PA Y++QN L+ AY LDS+TFN+LNQTKTL AAL ++++G++QS++Q++AL +L+ DS E+G E + LGVLP + A+L+SGL GA++QR LQ+ G RN+ S+E+AV+ ++TL GI A G A GW IP+L QA GGL VG VTK+AGSV+KGFAL+ GI++T Q+ + +TM LV TYLH P+
Sbjct: 13 GGLTPKALFYMSLLAVQFGLQPILTQRYIPAGS-DTKLIVIVMEFSKIILGSTMLTIGSARGQAGEGGWAKAFDGWSIKSWFTVAGVPAVLYSIQNLLALTAYQTLDSVTFNVLNQTKTLSAALFCFIILGRRQSQMQVMALLLLVLAALIIEGTISIKKIFGNSDSNEEEEEQGE-RQEIDPIKHFSLGVLPCLLASLISGLAGALSQRNLQKGGGRNSFLFSMEMAVFSIITL------GISKFAAGDKKGEGDADGGWNHTMLIPILFQACGGLFVGLVTKYAGSVRKGFALLVGIVLTGIFQAGLVGRPITMEQIYGTFLVIVATYLHLTNPY 341 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig878.16876.1 >prot_E_fasciculatus_S2_contig878.16876.1 ID=prot_E_fasciculatus_S2_contig878.16876.1|Name=mRNA_E_fasciculatus_S2_contig878.16876.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=343bp MGGTRQDPGSVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVback to top mRNA from alignment at E_fasciculatus_S2_contig878:6831..9512- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig878.16876.1 ID=mRNA_E_fasciculatus_S2_contig878.16876.1|Name=mRNA_E_fasciculatus_S2_contig878.16876.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2682bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig878:6831..9512- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig878:6831..9512- >mRNA_E_fasciculatus_S2_contig878.16876.1 ID=mRNA_E_fasciculatus_S2_contig878.16876.1|Name=mRNA_E_fasciculatus_S2_contig878.16876.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1029bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig878:6831..9512- (Ectocarpus fasciculatus EfasUO2)back to top |