mRNA_E_fasciculatus_S2_contig878.16876.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig878.16876.1
Unique NamemRNA_E_fasciculatus_S2_contig878.16876.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: UDP-galactose (translocator, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG8_ECTSI)

HSP 1 Score: 599 bits (1544), Expect = 4.200e-212
Identity = 315/342 (92.11%), Postives = 320/342 (93.57%), Query Frame = 1
Query:    1 MGGTRQDPGSVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEKML 1026
            MGG  +DPGSVSRKGR FMG+LALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTK+ LCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLL              DSKAGT ERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRN+SQLSLELAVYGVLTLLLTSGSGIGGSDAVT AGRSSAFQGWT WTC+PVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVT AVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEKML
Sbjct:    1 MGGAERDPGSVSRKGRIFMGMLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKITLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLLAAALLLNSGSSGGDSKAGTGERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNSSQLSLELAVYGVLTLLLTSGSGIGGSDAVTSAGRSSAFQGWTKWTCVPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTAAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEKML 342          
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Putative (UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE8_9STRA)

HSP 1 Score: 295 bits (755), Expect = 6.070e-93
Identity = 171/334 (51.20%), Postives = 234/334 (70.06%), Query Frame = 1
Query:    4 GGTRQDPGSVS-RKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLW-LGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQ 999
            GG RQ   +++ R+G  FM +LALQ+GLQP++QK+C+D+H+V+++SL++ TE+TK+ +C   I S+   V   +  +WTLR S++AAALPAA YALQNWL+Q+ YMNLDSLTFNLLNQTKTL AA+CL+L+MG++QS  Q++AL +L              ++++G    GL  + A  S   W LG+LPV+ A+L+SG   AVTQ++LQ  GRN+  LS ELAVYGVLTLLL S +  G    +        ++GWT+ T IPV++ A GG+IVGQVTKHAGSV+KGFALIGGILVT A Q  +E+  L+  H+ +A LVA  T+LH  +P Q
Sbjct:    7 GGERQSSEAINPRRGYVFMALLALQYGLQPLIQKSCIDRHAVNKVSLVVATEITKIAMCCGFILSTTGLVSE-LRATWTLRSSVKAAALPAACYALQNWLTQIGYMNLDSLTFNLLNQTKTLSAAVCLFLIMGRRQSGPQVLALMMLVAAALLL-------NAQSG----GLGDAAAPIS---WELGILPVVGASLLSGFSAAVTQKSLQERGRNSFLLSAELAVYGVLTLLLPSAASTGSLQGL--------WEGWTIRTVIPVVTNAMGGVIVGQVTKHAGSVKKGFALIGGILVTAAAQFILERQPLSREHYASAVLVAVSTFLHTRYPQQ 317          
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Putative (UDP-galactose translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG2_9STRA)

HSP 1 Score: 294 bits (753), Expect = 6.720e-93
Identity = 167/317 (52.68%), Postives = 226/317 (71.29%), Query Frame = 1
Query:   55 MGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLW-LGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAG--RSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPH 996
            M +LALQFGLQP++QK+C+++  V+R+SL++ TE+TK+ +C+ V+ SSG      +  SWTL+ S++AAALPAA YALQNWL Q+AYMNLDSLT+NLLNQTKTL AALCLY+VMG++QS  Q+VAL++L              +S+  + + G        S   W LGV+PVM A+L+SG   AVTQ++LQ  GRN+  LS EL +YG++TLL+T+ +  GG   V   G  R   ++GWT WTC+PV +QAAGG++VGQVTKHAGSV+KGFAL+GGILVT A Q  +E+  L+  H+ +A LVA  T LHA +P+
Sbjct:    1 MLLLALQFGLQPLVQKSCINREEVNRVSLVMATELTKVAICLSVMVSSG--FLADIQSSWTLKSSMKAAALPAALYALQNWLIQIAYMNLDSLTYNLLNQTKTLSAALCLYVVMGRRQSGPQIVALAMLVAAALLL-------NSRTASDKDGA-------SGISWELGVVPVMGASLLSGFSAAVTQKSLQERGRNSYLLSAELGLYGIVTLLVTTLAAEGGVQ-VRRGGMLRDGLWRGWTPWTCLPVFTQAAGGVVVGQVTKHAGSVKKGFALVGGILVTAAAQYVLEREPLSPEHYVSAVLVALSTVLHARYPY 300          
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Nucleotide-sugar (transporter n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR3_9STRA)

HSP 1 Score: 219 bits (559), Expect = 4.030e-63
Identity = 144/327 (44.04%), Postives = 198/327 (60.55%), Query Frame = 1
Query:   25 GSVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPML-ESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGS----GIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANF 990
            GSV + G F+M +LALQFGLQP+L +A +   S+ +M +++ TE  K++LC   +W + +K  R  L  +WT+R SL  AALPA+ YALQN ++Q  Y  LDSL+FNLLNQTKTL AA+CLY+VMG+KQ+ LQLVAL +L               S           S + D     LGVLPV+ A+L SG+  A+TQ+TLQ + RN+   S ELA+YG + L +   S       G+ +++L    S          +PV+  AAGG+IVG VTK+AG V+KGFALI GI +T   QS M+++  +  H  AA LV   T+LHA +
Sbjct:   49 GSVFQSGYFYMSLLALQFGLQPLLVRAFIPT-SLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASPAS-----------SPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSLSLPKNLSPLA------LLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKY 357          
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAC1_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.300e-57
Identity = 137/328 (41.77%), Postives = 191/328 (58.23%), Query Frame = 1
Query:   64 LALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGS------KVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLW--LGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTS-GSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEK 1020
            LALQFGLQP L K  + K  V + S++++TE TK+VLC+  +   G       +  R + +SW+LR +L    +PA  Y++QN L Q  Y  LD+LTFNLLNQ KT+FAA+CL+LV+GK+QS LQ+VAL +L              D+            EA  S   W  LG LPV+ A+L+SG   A TQ+ L    RN+   S+ELAV G+++LL     SG+ G + +     +    G   +  +PVLS AAGG++VG V K+AG V+KGF L+ GIL T  VQS +E +++T   + A+ LV G  YLH N+P + P  P K
Sbjct:   12 LALQFGLQPFLSKRYIGKD-VLKPSVVMLTESTKIVLCLTCLLVEGLLQKQRFQNLRDIAKSWSLRNALYCVVVPAVLYSIQNILVQSGYQYLDALTFNLLNQCKTIFAAVCLFLVLGKRQSFLQVVALLMLVTAAIILNLDKVGGDA------------EAVASRDEWFQLGFLPVLLASLISGFTTAFTQKILTEK-RNSYLFSMELAVIGIISLLAKELSSGVEGQEVLRTGNIAPLLVGMDAYVMLPVLSSAAGGIVVGLVVKYAGGVRKGFGLVLGILFTGLVQSIVEGTSITGLQYAASGLVVGSMYLHTNYPWK-PVAPAK 324          
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: ROCK1 (protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JLU5_9DINO)

HSP 1 Score: 195 bits (495), Expect = 8.070e-54
Identity = 125/315 (39.68%), Postives = 188/315 (59.68%), Query Frame = 1
Query:   52 FMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRS-GRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFP 993
            F+ +LA QFGLQP+L K  + +  V ++ L+       ++  + +++ +       +  SW+LR S+  A LPA  +++Q WL Q+   ++DSL+FNLLNQTKTL AAL  YL++GK+QSR+Q  AL LL               +K  + +    T+ A+     + GVLPV+ AAL SGL  A+TQRTL+ + GRN+   S+EL+++G   LL    +G+  S           +QGW+  + +PV++QA GG++VG VTK++ SV+KGFAL+ GI++T   Q+ +E + LT  H  AA LVA  T LHA FP
Sbjct:   57 FLVLLAAQFGLQPLLTKQLLPRGHVPQVFLLSSNFSKILISLLILLFGNTRDEVADIARSWSLRESVLKAGLPAIMFSMQGWLLQVGQAHIDSLSFNLLNQTKTLSAALMCYLLLGKRQSRVQCFALVLLFVSALLLG-------TKGFSSKSSRDTAGADAGDAFFFGVLPVVTAALSSGLTAAMTQRTLKGAQGRNSWLYSMELSMWGSACLL----AGVCFSSDARGRLVQGPYQGWSALSVLPVMTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQAVLEDAPLTSGHLIAAVLVAISTVLHAEFP 360          
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Uncharacterized (protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PUK5_PEROL)

HSP 1 Score: 194 bits (494), Expect = 1.020e-53
Identity = 129/331 (38.97%), Postives = 190/331 (57.40%), Query Frame = 1
Query:   28 SVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEK 1020
            ++S KG F+M +LALQ+G QP++      + S+   +++ +TE+ K  L + ++++ GS      L+ WTLRGS  AAALPA  Y+LQN   Q+A+ NLD L +NL+NQTK L  AL  YL +GK+QSR QL+AL +L                +A          E E +ARL  G++ V+AA+ +SG+  ++++  LQ   RN+   S ELAVY V+ +        G   AV       A Q WTM   IP+ + A GG+ VGQVTK+AGSVQKGF++I GI+ T  ++S +    LTM    +A L A  TY++A +P++   +  K
Sbjct:   57 AISPKGLFYMALLALQYGSQPLITTTFTPR-SIPSSAIVTITEIVKFFLAIGLMFAEGSA--SSALQGWTLRGSFLAAALPAMSYSLQNICIQIAFQNLDPLVYNLVNQTKLLSTALLTYLFLGKRQSRHQLIALGMLFIAAVMISVGQASEPPEA----------EGERNARL--GLICVLAASALSGVGASISELALQTYSRNSFLFSAELAVYSVIAISTGELFKDGHLPAV-----GQALQTWTM--LIPIFTAAMGGIFVGQVTKYAGSVQKGFSIIAGIIFTAFLRSVILSKPLTMELILSAPLTAVATYMYAKYPYKAQVQSSK 365          
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: ROCK1 (protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812QLI2_9DINO)

HSP 1 Score: 192 bits (489), Expect = 5.880e-53
Identity = 127/318 (39.94%), Postives = 193/318 (60.69%), Query Frame = 1
Query:   52 FMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSK-VYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRS-GRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGR--SSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFP 993
            F+ +LA QFGLQP+L K  + +  + ++ L+  +  +K+++ +F++    ++     ++ +W+LR S+  A +PA  +++Q WL Q+   ++DSL+FNLLNQTKTL AAL  YL++G++QSR+Q  AL LL                K   R+       A D+     GVLPV+ AAL SGL  A+TQRTL+ S GRN+   S+EL+++G   L+    +G+  SD     GR     +QGW+  + +PVL+QA GG++VG VTK++ SV+KGFAL+ GI++T   Q  +E + LT  H  AA LVA  T LHA +P
Sbjct:   57 FLVLLAAQFGLQPLLSKQLLPRGHLPQVFLLS-SNFSKILISLFILMFGNTRDEIADIVRAWSLRESILKAGIPAIMFSMQGWLLQVGQAHVDSLSFNLLNQTKTLSAALMCYLLLGRRQSRIQCFALVLLFVSALLLGTKGCSSFKKHSARD-----GSASDA--FVFGVLPVVVAALSSGLTAAMTQRTLKGSAGRNSWLYSMELSMWGSACLI----AGVCISDK---RGRLLQGPYQGWSALSVVPVLTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQCVLEDAPLTSWHLIAAVLVAISTVLHAQYP 359          
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EVQ2_9STRA)

HSP 1 Score: 193 bits (490), Expect = 8.750e-53
Identity = 133/343 (38.78%), Postives = 199/343 (58.02%), Query Frame = 1
Query:   52 FMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLXXXXXXXXXXXXXXDS-KAGTRERGLLTSEAEDSAR-LWLGVLPVMAAALMSGLMGAVTQRTLQRSG-RNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKS-ALTMTHWTAAALVAGGTYLHANFPHQGPK-----KPEKML*--SHRVYI 1047
            +MG+LA+Q+G+QP+L K       V+R S+++V E+ K  +   ++  SG    +  ++SW++   +  A +PA  Y +QN  + LA  NLD++T+N+LNQTKTL AALC YLVMG+KQS++Q+VAL LL                  A + E        E S++ L  GV PV+ A+ +SGL GA++Q+ LQ S  RN+   ++EL +   + L++TS +  G S + T       F+ WT  T IP+L+ AAGG++VG VTKHAGSV+KGFALI G+L++  +Q+T++    L   H     L +   YLH   P+  P      K EK +   S RV+I
Sbjct:   20 YMGLLAVQYGIQPILTKEFTSSD-VERKSVVLVQEVVKFAMAGSMLLMSGGG--KAAIQSWSVTSWISVALVPAGLYCIQNLSALLACQNLDAVTYNVLNQTKTLSAALCCYLVMGRKQSKMQIVALLLLLLSALVLEKIVNLDFLLSASSEEEDASDKTVEVSSKHLTHGVAPVLLASFLSGLAGALSQKNLQGSNSRNSYFFTMELCMATTIMLVITSLASSGSSSSPTN------FEHWTPTTIIPILTNAAGGILVGLVTKHAGSVKKGFALIFGLLISGILQATLKSDDGLQKEHIIGGILASISLYLHGTNPYVAPPTTADAKKEKRINAFSFRVFI 353          
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRP3_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.020e-51
Identity = 128/337 (37.98%), Postives = 190/337 (56.38%), Query Frame = 1
Query:   25 GSVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKMVL--CVFVIWSS----GSKVYRPMLESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVAL------SLLXXXXXXXXXXXXXXDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSG-RNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRSSAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAVQSTMEKSALTMTHWTAAALVAGGTYLHANFPH 996
            G ++ K  F+M +LA+QFGLQP+L +  +   S D   ++IV E +K++L   +  I S+    G   +    + W+++     A +PA  Y++QN L+  AY  LDS+TFN+LNQTKTL AAL  ++++G++QS++Q++AL      +L+              DS     E+G    E +      LGVLP + A+L+SGL GA++QR LQ+ G RN+   S+E+AV+ ++TL      GI    A    G   A  GW     IP+L QA GGL VG VTK+AGSV+KGFAL+ GI++T   Q+ +    +TM       LV   TYLH   P+
Sbjct:   13 GGLTPKALFYMSLLAVQFGLQPILTQRYIPAGS-DTKLIVIVMEFSKIILGSTMLTIGSARGQAGEGGWAKAFDGWSIKSWFTVAGVPAVLYSIQNLLALTAYQTLDSVTFNVLNQTKTLSAALFCFIILGRRQSQMQVMALLLLVLAALIIEGTISIKKIFGNSDSNEEEEEQGE-RQEIDPIKHFSLGVLPCLLASLISGLAGALSQRNLQKGGGRNSFLFSMEMAVFSIITL------GISKFAAGDKKGEGDADGGWNHTMLIPILFQACGGLFVGLVTKYAGSVRKGFALLVGIVLTGIFQAGLVGRPITMEQIYGTFLVIVATYLHLTNPY 341          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig878.16876.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UDP-galactose4.200e-21292.11translocator, putative n=2 Tax=Ectocarpus TaxID=28... [more]
Putative6.070e-9351.20UDP-galactose translocator n=1 Tax=Tribonema minus... [more]
Putative6.720e-9352.68UDP-galactose translocator n=1 Tax=Tribonema minus... [more]
Nucleotide-sugar4.030e-6344.04transporter n=2 Tax=Nannochloropsis gaditana TaxID... [more]
Hypothetical2.300e-5741.77protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
ROCK18.070e-5439.68protein n=1 Tax=Symbiodinium natans TaxID=878477 R... [more]
Uncharacterized1.020e-5338.97protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID... [more]
ROCK15.880e-5339.94protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A8... [more]
Hypothetical8.750e-5338.78protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical3.020e-5137.98protein n=1 Tax=Corethron hystrix TaxID=216773 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig878contigE_fasciculatus_S2_contig878:6831..9512 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score603.6
Seed ortholog evalue5.8e-170
Seed eggNOG ortholog2880.D7FJG8
Model size1545
KEGG koko:K15272
KEGG TC2.A.7.12
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005338,GO:0005342,GO:0005463,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006810,GO:0006811,GO:0006820,GO:0007275,GO:0008150,GO:0008509,GO:0008514,GO:0009555,GO:0009653,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010208,GO:0010584,GO:0010605,GO:0010927,GO:0012505,GO:0015075,GO:0015136,GO:0015165,GO:0015318,GO:0015711,GO:0015739,GO:0015780,GO:0015789,GO:0015849,GO:0015931,GO:0015932,GO:0016043,GO:0019222,GO:0022607,GO:0022857,GO:0030162,GO:0030198,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032501,GO:0032502,GO:0032989,GO:0034220,GO:0042176,GO:0042177,GO:0043062,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0045861,GO:0046942,GO:0046943,GO:0048229,GO:0048509,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051341,GO:0051354,GO:0055085,GO:0060255,GO:0061136,GO:0065007,GO:0065009,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0085029,GO:0090481,GO:0098656,GO:1901264,GO:1901505,GO:1901799,GO:1902183,GO:1903050,GO:1903051,GO:1903069,GO:1903070,GO:1903362,GO:1903363,GO:1903573,GO:1903825,GO:1903856,GO:1903857,GO:1904292,GO:1904293,GO:1905039,GO:1905897,GO:1990569,GO:2000058,GO:2000059
Exons4
EggNOG free text desc.pyrimidine nucleotide-sugar transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG2234@2759
Ec32 ortholog descriptionNucleotide-sugar transporter
Ec32 orthologEc-14_006310.1
Cds size1029
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842533.2776628-UTR-E_fasciculatus_S2_contig878:6830..73461696842533.2776628-UTR-E_fasciculatus_S2_contig878:6830..7346Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig878 6831..7346 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842533.29034-CDS-E_fasciculatus_S2_contig878:7346..74421696842533.29034-CDS-E_fasciculatus_S2_contig878:7346..7442Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig878 7347..7442 -
1696842533.3030994-CDS-E_fasciculatus_S2_contig878:7631..77361696842533.3030994-CDS-E_fasciculatus_S2_contig878:7631..7736Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig878 7632..7736 -
1696842533.3169858-CDS-E_fasciculatus_S2_contig878:8176..87891696842533.3169858-CDS-E_fasciculatus_S2_contig878:8176..8789Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig878 8177..8789 -
1696842533.332408-CDS-E_fasciculatus_S2_contig878:9297..95121696842533.332408-CDS-E_fasciculatus_S2_contig878:9297..9512Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig878 9298..9512 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig878.16876.1prot_E_fasciculatus_S2_contig878.16876.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig878 7347..9512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig878.16876.1

>prot_E_fasciculatus_S2_contig878.16876.1 ID=prot_E_fasciculatus_S2_contig878.16876.1|Name=mRNA_E_fasciculatus_S2_contig878.16876.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=343bp
MGGTRQDPGSVSRKGRFFMGVLALQFGLQPVLQKACVDKHSVDRMSLIIV
TEMTKMVLCVFVIWSSGSKVYRPMLESWTLRGSLEAAALPAAGYALQNWL
SQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLLAA
ALLLNSSSSGGDSKAGTRERGLLTSEAEDSARLWLGVLPVMAAALMSGLM
GAVTQRTLQRSGRNASQLSLELAVYGVLTLLLTSGSGIGGSDAVTLAGRS
SAFQGWTMWTCIPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTVAV
QSTMEKSALTMTHWTAAALVAGGTYLHANFPHQGPKKPEKML*
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mRNA from alignment at E_fasciculatus_S2_contig878:6831..9512-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig878.16876.1 ID=mRNA_E_fasciculatus_S2_contig878.16876.1|Name=mRNA_E_fasciculatus_S2_contig878.16876.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2682bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig878:6831..9512- (Ectocarpus fasciculatus EfasUO2)
ATGGGTGGCACAAGGCAGGATCCCGGGAGTGTCAGTAGGAAAGGACGGTT TTTCATGGGAGTGCTCGCGCTTCAGTTTGGGCTCCAGCCGGTGTTGCAGA AGGCTTGCGTGGACAAGCACAGCGTGGACCGCATGTCCCTCATCATTGTC ACCGAAATGACCAAGATGGTCCTTTGTGTGTTCGTTATCTGGTCGTCTGG GTCAAAGGTGTATCGGTGAGAGGAAGTTATTTCGTTAATTCAGCATTCAT ATCAGGTACAGTAGTTCTGTACAGCTCCGTAGGTGCTTAGACTAGACTAC GTAGTTTCGGCAGTGGAGAAATACGCTAATAAAACACGAACACGGGGGTG CCATCTCTCCGACTCGTACGGTAATGCACCAAGACAGGCTACACCCTGAG CGCACAGCACATGAGGGGGCTTCATGCCAAACCGTTCGTTGTACGGTCAT CGCGACACATATCAATGTTGTACGATACTCCTTCGAGGACCCCCCAACAC TCACTCAACCGTGCAGAGCTATGCGGAAGTGCGAGAGGCTGTGTGAGAGC AGAGAGTGGGCAACGGCACCCGGGGAGCATGTCGACTTATGCCGGCTGCC TCCGACACATACTGGCACATGCACGCATAGACTACAATTTGGTATCGAAG CAGGCCGTGACAAGTGCTCTCCCCCCCTTTCCTCTCTCCTGGCGCCCTTC TTCTGCTGACCTCTGACTTTTAGACCCATGCTTGAATCTTGGACCCTTCG AGGGAGCCTCGAGGCGGCAGCGCTACCAGCCGCCGGGTACGCGCTGCAGA ACTGGCTGTCCCAGCTGGCCTACATGAACCTGGACTCCCTGACGTTCAAC CTCCTCAATCAAACCAAGACCCTCTTCGCGGCCCTCTGCCTGTACCTCGT CATGGGCAAGAAGCAGTCCCGCTTGCAGCTCGTCGCCCTCTCGCTCTTGC TAGCGGCGGCCCTTCTCCTCAACTCAAGTAGCAGTGGCGGCGATTCAAAG GCAGGCACAAGGGAAAGGGGGCTGCTAACGTCGGAGGCAGAGGATTCTGC GCGGCTCTGGCTAGGCGTGCTCCCTGTCATGGCGGCGGCCCTGATGTCGG GGTTGATGGGAGCGGTAACCCAGAGGACGTTGCAGAGGAGCGGTCGCAAT GCGTCGCAGCTTTCTCTCGAGCTAGCCGTATACGGCGTTTTAACCTTGCT GCTGACATCGGGATCCGGGATCGGTGGGTCGGACGCGGTGACGTTAGCAG GAAGAAGTAGCGCGTTCCAGGGATGGACCATGTGGACTTGCATACCCGTG CTCAGTCAGGCGGCAGGCGGGTTGATCGTGGGCCAGGTAAACAGTAGTGT CTGTGCGTCCGGCCTGTGTTGTGCGAGTTTGATTGTAACGTTACTTAGTT GAACGAAACGATCTCGCGTTCGTTGGCATCTTAAGTGGGAGTCGCTTTCA CTGCGTACATGTGTATGTGGACCCTCCCAGTGAACGCAGGGTGCGCATGA AGGTGTCGATACTGCTTCCGTGAAACGATCAGTGGTGATTTGAGTGCGCG TACCTGGAGATGGTAGTACTCGCTGTTTTTCCTTTCTCTTGATGGCAATG GCAGTGGTTCTCTGCAAAGTTCACTCGTCGACTCCAAGAAAGGGCCAGAG AACGCATCAGGTTTCGCTGCTCGCGTGAACGACCGCTTCTGACTCCCTTT ACGCTATCATACCCCCTCCCCCCACGCCCGCTGCCTTCCTCGTTGCGCGT GCGGACTTGTGGCTAACTTCGGATAGGTGACGAAGCACGCTGGGAGCGTC CAGAAGGGTTTTGCCTTGATAGGAGGTATCCTCGTGACGGTGGCAGTGCA GAGCACTATGGAGAAGTCGGCTCTCACCATGGTAAGGCATCGTGATGCAG AACAGGCTCTGGGAGGAACGAGGGCTAGCTGTACTTACATAGTCTATCCC CCATGTAGCGAACTGCCGTTCGAATAATTGTCAACCATTTCGAATATTTG TTAACCGTGCTGGGTGCGTGTGTGCCTTTTTTTTCTGAATTTTCTCCCCC TGGTCGATGCTTGACGACAGACGCACTGGACGGCGGCCGCTCTTGTCGCT GGAGGCACCTACCTGCACGCCAACTTCCCCCACCAGGGCCCCAAGAAACC TGAGAAGATGCTCTGATCACACCGTGTCTACATCCGAAGTAGTGCTCGTG GTTACCGACTGCACCACCGGGGGCGCGACCAGCAGCCGCCCGCGTTGTAC GCTGTTCTTTCGGCTCGCGTCGAGATAAGAGATAAGAGATAACCTATGCA AACGGAGGTGGGAGAAGAGAGCGCGCACGGCTCCTTGCAGTCCCGTATGT ACGTCAAACCACCCCAGCATGCCTGGATATACCCCACAGGGTCCTACGAC CCTGTGGATGCCCTGGTGGTACCTTGCCAAGGAGGGAGTAGCCTAAATTG TCCGCGGTGGGATACGCTGCACTGGTCAGAACCCTGGAAAAGCCCTGGAA CTTTCGTGGCAGGGTTGTGGGACGAGAGGAGTGCCGAAAAGAGACCACAG GTCACACCTACATTGTCGTGCACAAGCGTTTGTTGTTTAGTTTCCCGGCT CTTGGGGTGTCTAGCTGGTAGGGCAATTTGTTGCCTGGACGGAAGAAAAT GTAGACCGAGTGGCTCCCTTGGTTTATGAAAT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig878:6831..9512-

>mRNA_E_fasciculatus_S2_contig878.16876.1 ID=mRNA_E_fasciculatus_S2_contig878.16876.1|Name=mRNA_E_fasciculatus_S2_contig878.16876.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1029bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig878:6831..9512- (Ectocarpus fasciculatus EfasUO2)
ATGGGTGGCACAAGGCAGGATCCCGGGAGTGTCAGTAGGAAAGGACGGTT
TTTCATGGGAGTGCTCGCGCTTCAGTTTGGGCTCCAGCCGGTGTTGCAGA
AGGCTTGCGTGGACAAGCACAGCGTGGACCGCATGTCCCTCATCATTGTC
ACCGAAATGACCAAGATGGTCCTTTGTGTGTTCGTTATCTGGTCGTCTGG
GTCAAAGGTGTATCGACCCATGCTTGAATCTTGGACCCTTCGAGGGAGCC
TCGAGGCGGCAGCGCTACCAGCCGCCGGGTACGCGCTGCAGAACTGGCTG
TCCCAGCTGGCCTACATGAACCTGGACTCCCTGACGTTCAACCTCCTCAA
TCAAACCAAGACCCTCTTCGCGGCCCTCTGCCTGTACCTCGTCATGGGCA
AGAAGCAGTCCCGCTTGCAGCTCGTCGCCCTCTCGCTCTTGCTAGCGGCG
GCCCTTCTCCTCAACTCAAGTAGCAGTGGCGGCGATTCAAAGGCAGGCAC
AAGGGAAAGGGGGCTGCTAACGTCGGAGGCAGAGGATTCTGCGCGGCTCT
GGCTAGGCGTGCTCCCTGTCATGGCGGCGGCCCTGATGTCGGGGTTGATG
GGAGCGGTAACCCAGAGGACGTTGCAGAGGAGCGGTCGCAATGCGTCGCA
GCTTTCTCTCGAGCTAGCCGTATACGGCGTTTTAACCTTGCTGCTGACAT
CGGGATCCGGGATCGGTGGGTCGGACGCGGTGACGTTAGCAGGAAGAAGT
AGCGCGTTCCAGGGATGGACCATGTGGACTTGCATACCCGTGCTCAGTCA
GGCGGCAGGCGGGTTGATCGTGGGCCAGGTGACGAAGCACGCTGGGAGCG
TCCAGAAGGGTTTTGCCTTGATAGGAGGTATCCTCGTGACGGTGGCAGTG
CAGAGCACTATGGAGAAGTCGGCTCTCACCATGACGCACTGGACGGCGGC
CGCTCTTGTCGCTGGAGGCACCTACCTGCACGCCAACTTCCCCCACCAGG
GCCCCAAGAAACCTGAGAAGATGCTCTGA
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