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Homology
BLAST of mRNA_E_fasciculatus_S2_contig8615.16738.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP74_ECTSI) HSP 1 Score: 285 bits (728), Expect = 8.570e-87 Identity = 311/341 (91.20%), Postives = 319/341 (93.55%), Query Frame = 1
Query: 1 MVDRDQQHAFLRGFEPELVKLVFDSATAEQLAAWLRLLLELAADNEHLELISRLENAGAVGSRLHLAVRQGNGMLVADTIKCGESPDARDGNGDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVSPFLDSESCSXXXXXXXXXXXDVVRILAKHGADMDGAASTGLTLLHLAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANHRNPRIENGVVNVRFGREPSPLELAACYGHAHVVKTMLRHGADVNSKDCSYQPALHRAA 1023
M+ RDQQHAFLRGFEPELVKL+FD+ATAEQL AWLRL LELAADN+HLELISRLENAGAVGSR HLAVRQGNGMLVADTIK GESPDARDGNGDAP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVSPFLDSESCSXXXXXXXXXXX AKHGADMD AASTGLTLLH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANHRNP IEN VVN+RFG EPSPLELAAC+GHAHVV+TMLRHGADV+S DC YQPALHRAA
Sbjct: 1 MIGRDQQHAFLRGFEPELVKLMFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVADTIKRGESPDARDGNGDAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWVSPFLDSESCSXXXXXXXXXXXXXXXXXAKHGADMDAAASTGLTLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANHRNPIIENDVVNLRFGGEPSPLELAACHGHAHVVRTMLRHGADVDSTDCPYQPALHRAA 341
BLAST of mRNA_E_fasciculatus_S2_contig8615.16738.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG9_9PHAE) HSP 1 Score: 149 bits (375), Expect = 6.040e-40 Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 1
Query: 1 MVDRDQQHAFLRGFEPELVKLVFDSATAEQLAAWLRLLLELAADNEHLELISRLENAGAVGSRLHLAVRQGNGMLVADTIKCGESPDAR 267
MV RD QHA LRGFEPELV+LVFD+ATAEQL AWLRL LELAADN+HLELISRLENAGAVGSR HLAVRQGNGMLV DTIK GESP+AR
Sbjct: 1 MVGRDHQHACLRGFEPELVRLVFDTATAEQLEAWLRLSLELAADNKHLELISRLENAGAVGSRFHLAVRQGNGMLVTDTIKRGESPNAR 89
BLAST of mRNA_E_fasciculatus_S2_contig8615.16738.1 vs.
Match: Ankyrin (repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 2.620e-6 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 31 LRGFEPELVKLVFDSATAEQLAAWLRLLLELAADNEHLELISRLENAGAVGSRLHLAVRQGNGMLVADTIKCGESPDARDGNGD 282
LRG E + LV Q A WLR LE AA +++L+++L+ AGA GS LHLA+R G L + ++ G A+D NGD
Sbjct: 26 LRGTEKTIFDLVCAGTNRRQWAEWLRTPLEHAAGVGNIDLVTKLQGAGAGGSALHLALRAGQDALAQELLRLGAPTKAKDNNGD 109
BLAST of mRNA_E_fasciculatus_S2_contig8615.16738.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN84_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 7.810e-6 Identity = 36/86 (41.86%), Postives = 48/86 (55.81%), Query Frame = 1
Query: 31 LRGFEPELVKLVFDSATAEQLAAWLRLLLELAADNEHLELISRLENAGAVGSRLHLAVRQGNGMLVADTIKCGESPDARDGNGDAP 288
LRG E + LV + Q A WLR LE AA +L+L+++L+ A A GS LHLA+R G L + ++ G A D NGD P
Sbjct: 26 LRGTEETIFDLVCAGTSKMQWAEWLRTPLEHAASAGNLDLVTKLQEAEAGGSALHLALRAGQDALARELLRLGAPTKAIDNNGDTP 111
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8615.16738.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
| Match Name | E-value | Identity | Description | |
|---|
| Similar | 8.570e-87 | 91.20 | to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879... | [more] |
| Uncharacterized | 6.040e-40 | 86.52 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Ankyrin | 2.620e-6 | 41.67 | repeat protein n=2 Tax=Ectocarpus siliculosus TaxI... | [more] |
| Uncharacterized | 7.810e-6 | 41.86 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 283.9 |
| Seed ortholog evalue | 1.5e-73 |
| Seed eggNOG ortholog | 2880.D7FP74 |
| Model size | 1494 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-08_000580.1 |
| Cds size | 1494 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842519.572879-CDS-E_fasciculatus_S2_contig8615:2070..3160 | 1696842519.572879-CDS-E_fasciculatus_S2_contig8615:2070..3160 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8615 2071..3160 - |
| 1696842519.589464-CDS-E_fasciculatus_S2_contig8615:3387..3525 | 1696842519.589464-CDS-E_fasciculatus_S2_contig8615:3387..3525 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8615 3388..3525 - |
| 1696842519.6032178-CDS-E_fasciculatus_S2_contig8615:4612..4878 | 1696842519.6032178-CDS-E_fasciculatus_S2_contig8615:4612..4878 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig8615 4613..4878 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8615.16738.1 >prot_E_fasciculatus_S2_contig8615.16738.1 ID=prot_E_fasciculatus_S2_contig8615.16738.1|Name=mRNA_E_fasciculatus_S2_contig8615.16738.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=498bp
MVDRDQQHAFLRGFEPELVKLVFDSATAEQLAAWLRLLLELAADNEHLEL
ISRLENAGAVGSRLHLAVRQGNGMLVADTIKCGESPDARDGNGDAPLHIA
GARGDADLARLLLSSGADPNLSDRKQRTPLHVTARYGHAETAGALLSGGA
WVSPFLDSESCSPLELAVRHGHVDVVRILAKHGADMDGAASTGLTLLHLA
AGKDMVDLLQCLVAAGASLDSRDKDGSTALHIAAENGAADAVKVLLALGA
RPCEFNGEGVSPLGLACKGGHLQAVLAILAANHRNPRIENGVVNVRFGRE
PSPLELAACYGHAHVVKTMLRHGADVNSKDCSYQPALHRAADGGHVDVLK
VLIDHGANLNAVDTDAETALHHAATFDQSGAVDVLVRAGANIEALGEESY
TPLHLACRFQKREAARALLTHGANVQTVDENGCTPLHSAASNADAQVVEL
LLEFGADAATTSAAGSTAAEVIGYNCDGEELQAENIERLESLLVCAD* back to topmRNA from alignment at E_fasciculatus_S2_contig8615:2071..4878- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig8615.16738.1 ID=mRNA_E_fasciculatus_S2_contig8615.16738.1|Name=mRNA_E_fasciculatus_S2_contig8615.16738.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2808bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8615:2071..4878- (Ectocarpus fasciculatus EfasUO2)
ATGGTTGACAGAGATCAACAACACGCTTTCCTGCGGGGGTTCGAACCTGA
GCTCGTGAAACTGGTGTTCGATAGTGCCACCGCCGAGCAATTAGCGGCGT
GGCTCCGGCTGTTGTTGGAGCTGGCAGCAGACAACGAACACCTCGAGCTG
ATATCAAGACTTGAAAACGCGGGAGCGGTGGGCAGCAGGTTGCATCTAGC
CGTGAGGCAAGGGAACGGGATGCTGGTGGCCGACACAATCAAGTGTGGGG
AGTCACCTGATGCCAGGTGCGTGGACTCCACATCGTAGAGTGGCGTACGA
AAGCTGTACACATAGCTAACTCATCATTATGGTAACTGACGCTGTAGAAG
TGTACGTGTACATTCACCAAGGAACTGTAGGTTGCATTAGATACCACCCC
CCCCCCGTGTGATAGGGTGGTGGTGCTGTAGGTGTGTCATCTTGTGTCAC
CCGTGTGGTGAGGTACACTCACAGAACCCCACCCAAAGGGGGGTTGATGG
TGATAGGGTGTGATAACGTCGTCCATGTGATGAAGTGTGCTCAAAGCAGG
AACCCACCCACAGGATGACAGGGTGTTTGGATGAACGTGTTGAATGTATT
AGATTCTTTTTGTGCGCCTCATCAGTATATGGTGTCGTGCCCGGCTACTG
AGGGAACCGTGTCCACAGGGGCCACACGTTTCCCCGCGGCAAGTTGAAAA
GGGGACGTGATGGAACGCAGAGTGTCTGACCCACAGCAGTCTGAGCCGCT
GGGCTTCTAGCAGGGTTGTTAACTGCACCCCCCTCCACGGTTTTATCGAC
CTCCACAGCTTTTTGCGCGCAGGTTGCTTTGCCTGTTTGCTTGTGATCAC
GTGTTGCTACGTTGTCCCACCGTGTGATAAGCGGGGGCTTCGTCCATGAC
GAACGGCTCAACCTTGGGGGGGAGTGTTATGTTATTTCACCGTATGATAA
GATGACGTTTGTTTTGGGGCTAGACTAACAAAATAGCGCACGGTGTGGTA
TTCTGGAACTTTTCGAAAGGGGTGTGGTATCTTATGCAAGTGTGATATCT
ATCCAACCTACGGTAAGTGGTACATCGTGTGGCATAGCAGGATGATACAC
CTTCAACTCCTTGTTCCCACGAACTGCCGTAGTAAGCATATGTTGAGAGA
TAAACGTGTACGATAAAACCCTCGCAGACGACGCCACGTTCACGCCTCAT
GTGCGAACGTCACGTTGTTATTTCGTGTATTGTATGCCTAGACTGCTGTT
CATGTACAGAGGTTGACATCCGACCCACGCCTACAATCATTTTAGGCGTC
TTTGATTGGTCCCGAATTATTTTTCACGATCCACACGCGCACGTCCGGCA
CAGGGATGGAAATGGCGATGCTCCTCTTCATATCGCTGGAGCTCGAGGGG
ACGCAGACCTGGCACGCTTGCTACTGTCAAGCGGGGCCGACCCCAACCTG
TCAGACAGGAAACAACGCACCCCTCTGCATGTCACAGCCAGGTGCGTTGT
TTGAGGGCTGAAATACCAACGACTTCCACAAAATTCGATGCACAACAACA
CATTGTTTCGGTACAAGATCGCAAGGCCTCTTGTGCATGGCAAGTAGGAG
TACAAAGACACGTGTACAAGTATCCAAGGTAGGACCAAACGTGGAACCGT
TACACCGTTCAGGAGACAAACCGTTCAAGGCATCCGCGTCTTGTCCACTT
TGGACGCTAAAAATAAAGGTATGGCCACGCGGAAACGGCTGGCGCTTTGC
TTTCGGGAGGGGCCTGGGTGAGCCCCTTTCTCGACTCGGAGAGCTGCTCT
CCGCTAGAGCTAGCCGTTCGCCACGGGCATGTGGACGTGGTCAGGATCCT
TGCCAAGCATGGGGCAGACATGGATGGCGCAGCTTCTACTGGCCTGACAC
TTTTGCACCTTGCGGCCGGTAAGGACATGGTGGACCTACTGCAGTGCCTC
GTTGCAGCGGGGGCTAGCCTGGACTCGCGGGACAAGGACGGGTCGACGGC
CCTCCATATTGCCGCTGAAAATGGTGCGGCGGACGCAGTTAAGGTGCTGT
TAGCACTCGGAGCTCGTCCCTGCGAATTCAACGGTGAGGGTGTTTCTCCC
CTTGGCTTAGCTTGCAAGGGTGGCCATCTGCAGGCCGTCCTCGCGATTTT
GGCGGCGAACCATCGCAACCCCAGAATCGAGAACGGCGTTGTTAACGTTC
GCTTTGGAAGGGAGCCCTCGCCGCTCGAACTGGCTGCCTGCTATGGCCAC
GCACACGTCGTGAAGACCATGCTCCGCCACGGCGCGGATGTGAACAGCAA
GGACTGTTCCTACCAGCCGGCGCTGCACCGAGCTGCCGATGGGGGCCACG
TGGACGTGCTAAAAGTGTTGATAGATCACGGAGCGAATTTGAACGCTGTC
GATACTGACGCAGAAACAGCCCTCCATCACGCAGCAACCTTTGACCAATC
AGGCGCGGTTGACGTTCTCGTCCGGGCTGGCGCCAACATCGAAGCGTTGG
GGGAAGAGTCGTATACGCCCCTCCACCTGGCGTGTCGATTCCAGAAACGC
GAGGCCGCACGGGCGCTGTTGACCCACGGGGCAAACGTTCAGACTGTGGA
CGAGAACGGATGCACCCCTCTTCACTCGGCCGCGTCCAACGCAGATGCTC
AAGTAGTGGAACTTCTACTGGAGTTCGGGGCAGACGCAGCCACTACGTCT
GCAGCTGGATCTACCGCTGCGGAGGTTATCGGGTACAACTGTGATGGAGA
AGAGCTTCAAGCCGAGAACATCGAGCGACTGGAAAGTCTCTTGGTCTGCG
CTGACTAG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig8615:2071..4878- >mRNA_E_fasciculatus_S2_contig8615.16738.1 ID=mRNA_E_fasciculatus_S2_contig8615.16738.1|Name=mRNA_E_fasciculatus_S2_contig8615.16738.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1494bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8615:2071..4878- (Ectocarpus fasciculatus EfasUO2)
ATGGTTGACAGAGATCAACAACACGCTTTCCTGCGGGGGTTCGAACCTGA
GCTCGTGAAACTGGTGTTCGATAGTGCCACCGCCGAGCAATTAGCGGCGT
GGCTCCGGCTGTTGTTGGAGCTGGCAGCAGACAACGAACACCTCGAGCTG
ATATCAAGACTTGAAAACGCGGGAGCGGTGGGCAGCAGGTTGCATCTAGC
CGTGAGGCAAGGGAACGGGATGCTGGTGGCCGACACAATCAAGTGTGGGG
AGTCACCTGATGCCAGGGATGGAAATGGCGATGCTCCTCTTCATATCGCT
GGAGCTCGAGGGGACGCAGACCTGGCACGCTTGCTACTGTCAAGCGGGGC
CGACCCCAACCTGTCAGACAGGAAACAACGCACCCCTCTGCATGTCACAG
CCAGGTATGGCCACGCGGAAACGGCTGGCGCTTTGCTTTCGGGAGGGGCC
TGGGTGAGCCCCTTTCTCGACTCGGAGAGCTGCTCTCCGCTAGAGCTAGC
CGTTCGCCACGGGCATGTGGACGTGGTCAGGATCCTTGCCAAGCATGGGG
CAGACATGGATGGCGCAGCTTCTACTGGCCTGACACTTTTGCACCTTGCG
GCCGGTAAGGACATGGTGGACCTACTGCAGTGCCTCGTTGCAGCGGGGGC
TAGCCTGGACTCGCGGGACAAGGACGGGTCGACGGCCCTCCATATTGCCG
CTGAAAATGGTGCGGCGGACGCAGTTAAGGTGCTGTTAGCACTCGGAGCT
CGTCCCTGCGAATTCAACGGTGAGGGTGTTTCTCCCCTTGGCTTAGCTTG
CAAGGGTGGCCATCTGCAGGCCGTCCTCGCGATTTTGGCGGCGAACCATC
GCAACCCCAGAATCGAGAACGGCGTTGTTAACGTTCGCTTTGGAAGGGAG
CCCTCGCCGCTCGAACTGGCTGCCTGCTATGGCCACGCACACGTCGTGAA
GACCATGCTCCGCCACGGCGCGGATGTGAACAGCAAGGACTGTTCCTACC
AGCCGGCGCTGCACCGAGCTGCCGATGGGGGCCACGTGGACGTGCTAAAA
GTGTTGATAGATCACGGAGCGAATTTGAACGCTGTCGATACTGACGCAGA
AACAGCCCTCCATCACGCAGCAACCTTTGACCAATCAGGCGCGGTTGACG
TTCTCGTCCGGGCTGGCGCCAACATCGAAGCGTTGGGGGAAGAGTCGTAT
ACGCCCCTCCACCTGGCGTGTCGATTCCAGAAACGCGAGGCCGCACGGGC
GCTGTTGACCCACGGGGCAAACGTTCAGACTGTGGACGAGAACGGATGCA
CCCCTCTTCACTCGGCCGCGTCCAACGCAGATGCTCAAGTAGTGGAACTT
CTACTGGAGTTCGGGGCAGACGCAGCCACTACGTCTGCAGCTGGATCTAC
CGCTGCGGAGGTTATCGGGTACAACTGTGATGGAGAAGAGCTTCAAGCCG
AGAACATCGAGCGACTGGAAAGTCTCTTGGTCTGCGCTGACTAG back to top
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