mRNA_E_fasciculatus_S2_contig8475.16602.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8475.16602.1
Unique NamemRNA_E_fasciculatus_S2_contig8475.16602.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Vesicle (coat complex COPI, beta sub-unit (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI9_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 4.110e-87
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 1
Query:    1 QPLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVN 567
            QPLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGH+HYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVN
Sbjct:   26 QPLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHAHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVN 214          
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNK8_9STRA)

HSP 1 Score: 244 bits (624), Expect = 5.050e-79
Identity = 159/207 (76.81%), Postives = 182/207 (87.92%), Query Frame = 1
Query:    4 PLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRPYLLSGMNE 624
            PLRLEIKK L +RSDRVKCVDIHP E WVL+ALY+G+VF+WDY+  + +K+F+VC+LPVR ARFIVRK           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  WE+ W+CTQ+FEGH+HYVMMVKFNLKD+NTFASASLDR++KVWGLGA TPHFSLEGH+RGVN +DYYPGGD+PYLLSG ++
Sbjct:   12 PLRLEIKKKLQARSDRVKCVDIHPVENWVLAALYSGNVFLWDYETCNQIKNFDVCELPVRSARFIVRKQWFITASDDMHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEKSWECTQIFEGHAHYVMMVKFNLKDTNTFASASLDRTIKVWGLGAATPHFSLEGHDRGVNCVDYYPGGDKPYLLSGADD 218          
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Coatomer (WD associated region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX4_9STRA)

HSP 1 Score: 249 bits (636), Expect = 2.580e-73
Identity = 116/207 (56.04%), Postives = 138/207 (66.67%), Query Frame = 1
Query:    4 PLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRPYLLSGMNE 624
            PLRLEI+K+LSSRSDRVK VD+HPTEPWVL+ALYNG+VFIWDY+ ++MVKS+EVC LPVRCA+FIVRK                                                        WDWER WDC QVFEGH HYVMM+K N +D+NTFASASLDRS+KVWG+ A  PHF+L+GH+RGVN +DYYPGGDRPYL+SG ++
Sbjct:    2 PLRLEIRKMLSSRSDRVKSVDLHPTEPWVLTALYNGNVFIWDYEQATMVKSYEVCSLPVRCAKFIVRKQWFIAASDDMMLRVYNYNTMEKVNAWEAHTDYIRFVEVHPNLPYVLSCSDDMSIKLWDWERGWDCCQVFEGHVHYVMMIKVNPRDTNTFASASLDRSIKVWGVSASAPHFTLDGHDRGVNCLDYYPGGDRPYLVSGADD 208          
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR98_9STRA)

HSP 1 Score: 246 bits (629), Expect = 1.160e-72
Identity = 172/207 (83.09%), Postives = 192/207 (92.75%), Query Frame = 1
Query:    4 PLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRPYLLSGMNE 624
            PLRL IKK L +RSDRVKCVDIHPTEPW LSALYNG+VF+WD+++ SMVKSF++C+LPVR A+FI R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  W+R W+CTQ+FEGH+HYVMMVKFN+KD+NTFASASLDRS+KVWGLGA  PHFSLEGHERGVN IDYYPGGD+PYLLSG ++
Sbjct:   21 PLRLAIKKNLQARSDRVKCVDIHPTEPWALSALYNGNVFLWDFESGSMVKSFDICELPVRSAKFIPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDRNWECTQIFEGHAHYVMMVKFNMKDTNTFASASLDRSIKVWGLGAAVPHFSLEGHERGVNCIDYYPGGDKPYLLSGADD 227          
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Coatomer_WDAD (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3N3_9STRA)

HSP 1 Score: 245 bits (626), Expect = 6.180e-72
Identity = 124/207 (59.90%), Postives = 145/207 (70.05%), Query Frame = 1
Query:    4 PLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRPYLLSGMNE 624
            PLRLEIKK L++RSDR+K V++HPTEPWVLS LY G+VFIWDY + +MVKSFEVC LPVR A+FIVRK                                             XXXXXXXX   +DW++ WDCTQVFEGH+HYVMMVKFNLKD+N FASASLDR++KVWGLG+  PHFSLEGHE+GVN IDYYPGGD+PYLLSG ++
Sbjct:    2 PLRLEIKKKLTARSDRIKSVELHPTEPWVLSGLYTGNVFIWDYSSGAMVKSFEVCDLPVRSAKFIVRKSWFIAASDDMYLRVYNYNTMEKVKAWEAHMDYIRYVEVHPTLPYVXXXXXXXXIKLFDWDQNWDCTQVFEGHAHYVMMVKFNLKDTNVFASASLDRTIKVWGLGSHMPHFSLEGHEKGVNAIDYYPGGDKPYLLSGADD 208          
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YT62_9STRA)

HSP 1 Score: 229 bits (584), Expect = 7.370e-72
Identity = 110/206 (53.40%), Postives = 128/206 (62.14%), Query Frame = 1
Query:    4 PLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRPYLLSGMN 621
            PLRL+IKK L+SRS+RVK VD+HPTEPWVL+ LYNG V +WDY    +VKSFEV  LPVR ARFI RK                                                        WDW++ W CTQVFEGH HYVMM KFN KD+NTFA+ASLDR+V+VWGLG+  PHF+LEGHERGVN IDYYPGGD+PYL+SG +
Sbjct:    2 PLRLDIKKKLTSRSERVKSVDLHPTEPWVLTGLYNGSVMLWDYDKQQLVKSFEVSTLPVRNARFIARKQWIVASSDDLQLRVFNYNTMDKVTAFDAHTDYIRYLEVHPVLPIVLSCADDMTVKMWDWDKNWLCTQVFEGHGHYVMMAKFNPKDTNTFATASLDRTVRVWGLGSSHPHFTLEGHERGVNCIDYYPGGDKPYLISGSD 207          
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ5_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.600e-71
Identity = 112/204 (54.90%), Postives = 137/204 (67.16%), Query Frame = 1
Query:    4 PLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRPYLLSG 615
            PLRLEIKK LS+RSDRVK V++HPTEPWVL+ALY+G+V+IWDY + ++VKSFE+C+LPVRCA+FI+RK                                                        WDWE+ WDC QVFEGH+HYVMMV+FN KD+NTFASASLDR++KVWGLG  + HFSL+GH+RGVN IDYYPGGD+PYL+SG
Sbjct:    2 PLRLEIKKKLSARSDRVKSVELHPTEPWVLAALYSGNVYIWDYDSGALVKSFELCELPVRCAKFIIRKQWFVAASDDMQLRVFNYNTMEKVHAWEAHTDYIRFLEVHPSLPNILSSSDDMTIRLWDWEKNWDCIQVFEGHAHYVMMVRFNPKDTNTFASASLDRTIKVWGLGTESFHFSLDGHDRGVNAIDYYPGGDKPYLISG 205          
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Coatomer (subunit beta' n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKY2_AURAN)

HSP 1 Score: 241 bits (615), Expect = 7.230e-71
Identity = 111/206 (53.88%), Postives = 133/206 (64.56%), Query Frame = 1
Query:    4 PLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRPYLLSGMN 621
            PLRLEIKK LS+RSDRVKCVD+HPTEPWVLSALY+G++F+WD +  S++KS+E+C+LPVR  +FI R+                                                        WDW+  WDCT  FEGH+HYVMM KFNLKD+NTFASASLDR++KVWGL A  PHFSLEGHERGVN IDYYPGGD+PY+LSG +
Sbjct:    2 PLRLEIKKRLSARSDRVKCVDLHPTEPWVLSALYSGNIFLWDTETCSLIKSWEICELPVRSCKFIARRSQFICASDDMRLRIYNYNTMEKIKDMEAHADYIRFVEIHPTMPYILSSSDDMSMKLWDWDNNWDCTLTFEGHAHYVMMCKFNLKDTNTFASASLDRTIKVWGLAAQQPHFSLEGHERGVNCIDYYPGGDKPYILSGAD 207          
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Coatomer (subunit beta' n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMY1_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.660e-70
Identity = 111/206 (53.88%), Postives = 135/206 (65.53%), Query Frame = 1
Query:    4 PLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQLPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRPYLLSGMN 621
            PLRLEIKK LS+RSDRVKCVD+HPTEPWVLSALY+G++F+WD + SS++KS+EVC+LPVR  +FI R+                                                        W+WE+ WDCT  FEGH+HYVMM KFN KD+NTFASASLDR++KVWGLGA  PHFSLEGH+RGVN +DYYPGGD+PYL+SG +
Sbjct:    2 PLRLEIKKKLSARSDRVKCVDLHPTEPWVLSALYSGNIFLWDTETSSLLKSWEVCELPVRSCKFIARRSQFICASDDMRLRLYNYNTMEKVKDMEAHADYIRFVEIHPTLPYILSSSDDMSIKLWNWEQNWDCTSSFEGHAHYVMMCKFNPKDTNTFASASLDRTIKVWGLGAQQPHFSLEGHDRGVNCLDYYPGGDKPYLISGAD 207          
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSS5_HETAK)

HSP 1 Score: 239 bits (610), Expect = 7.220e-70
Identity = 115/206 (55.83%), Postives = 137/206 (66.50%), Query Frame = 1
Query:    4 PLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMVKSFEVCQ--LPVRCARFIVRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDWERQWDCTQVFEGHSHYVMMVKFNLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRPYLLSG 615
            PLRLEIKK LS+RSDRVK V+IHPTEPWVL+ALYNG+VFIWDY++ S+VKSFEV    LPVRCA++I RK                                                        WDWE+ W+CT+VFEGH+HYVMMV+FN KD+NTFASASLDR+VKVWGLGA  PHFSL+GH++G+N +DYYPGGD+PYLLSG
Sbjct:    2 PLRLEIKKKLSARSDRVKSVEIHPTEPWVLAALYNGNVFIWDYESGSLVKSFEVSDDNLPVRCAKWIPRKQWFVACSDDLKVRCYNYNTMEKVAEFEAHTDYIRYLEVHPSLPHVLSCSDDTTIKLWDWEKDWNCTKVFEGHAHYVMMVRFNPKDANTFASASLDRTVKVWGLGASDPHFSLDGHDKGINCVDYYPGGDKPYLLSG 207          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8475.16602.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Vesicle4.110e-8799.47coat complex COPI, beta sub-unit (Partial) (Fragme... [more]
Hypothetical5.050e-7976.81protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
Coatomer2.580e-7356.04WD associated region-domain-containing protein n=1... [more]
Hypothetical1.160e-7283.09protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Coatomer_WDAD6.180e-7259.90domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Uncharacterized7.370e-7253.40protein (Fragment) n=1 Tax=Achlya hypogyna TaxID=1... [more]
Hypothetical4.600e-7154.90protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Coatomer7.230e-7153.88subunit beta' n=1 Tax=Aureococcus anophagefferens ... [more]
Coatomer1.660e-7053.88subunit beta' n=4 Tax=Pelagomonas calceolata TaxID... [more]
Hypothetical7.220e-7055.83protein (Fragment) n=2 Tax=Heterosigma akashiwo Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8475contigE_fasciculatus_S2_contig8475:3887..6528 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score265.0
Seed ortholog evalue2.9e-68
Seed eggNOG ortholog2880.D8LNI9
Model size624
KEGG koko:K17302
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005798,GO:0006810,GO:0006886,GO:0006888,GO:0006890,GO:0006891,GO:0008104,GO:0008150,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0030117,GO:0030120,GO:0030126,GO:0030135,GO:0030137,GO:0030659,GO:0030660,GO:0030662,GO:0030663,GO:0031090,GO:0031410,GO:0031982,GO:0032991,GO:0033036,GO:0034613,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0048475,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0097708,GO:0098588,GO:0098796,GO:0098805
Exons5
EggNOG free text desc.The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
EggNOG OGsKOG0276@1,KOG0276@2759
Cds size624
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842506.3344185-CDS-E_fasciculatus_S2_contig8475:3886..40211696842506.3344185-CDS-E_fasciculatus_S2_contig8475:3886..4021Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8475 3887..4021 +
1696842506.346307-CDS-E_fasciculatus_S2_contig8475:4514..46521696842506.346307-CDS-E_fasciculatus_S2_contig8475:4514..4652Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8475 4515..4652 +
1696842506.3603356-CDS-E_fasciculatus_S2_contig8475:5010..51451696842506.3603356-CDS-E_fasciculatus_S2_contig8475:5010..5145Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8475 5011..5145 +
1696842506.3691258-CDS-E_fasciculatus_S2_contig8475:5562..56481696842506.3691258-CDS-E_fasciculatus_S2_contig8475:5562..5648Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8475 5563..5648 +
1696842506.37855-CDS-E_fasciculatus_S2_contig8475:6398..65281696842506.37855-CDS-E_fasciculatus_S2_contig8475:6398..6528Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8475 6399..6528 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8475.16602.1prot_E_fasciculatus_S2_contig8475.16602.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8475 3887..6528 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8475.16602.1

>prot_E_fasciculatus_S2_contig8475.16602.1 ID=prot_E_fasciculatus_S2_contig8475.16602.1|Name=mRNA_E_fasciculatus_S2_contig8475.16602.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=208bp
QPLRLEIKKLLSSRSDRVKCVDIHPTEPWVLSALYNGHVFIWDYQASSMV
KSFEVCQLPVRCARFIVRKQWFITASDDMHIRVFNYNTMEKIQAWEAHTD
YIRYLEIHPTLPYVLSASDDMSVKLWDWERQWDCTQVFEGHSHYVMMVKF
NLKDSNTFASASLDRSVKVWGLGAPTPHFSLEGHERGVNTIDYYPGGDRP
YLLSGMNE
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mRNA from alignment at E_fasciculatus_S2_contig8475:3887..6528+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8475.16602.1 ID=mRNA_E_fasciculatus_S2_contig8475.16602.1|Name=mRNA_E_fasciculatus_S2_contig8475.16602.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2642bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8475:3887..6528+ (Ectocarpus fasciculatus EfasUO2)
CAGCCGCTTCGTTTGGAGATCAAGAAGCTCCTCTCCTCCCGGTCCGACCG CGTCAAGTGCGTCGACATCCACCCCACCGAGCCGTGGGTGCTCAGCGCTC TCTACAACGGCCATGTCTTCATCTGGGATTACCAGGTGATTTTTGTTATT CTGTGCTGTTCTCTTCTCTTCTCTCTGTTGTGTTCTGTTGTGTTGTGTCG TGTTGTGTTCTCTTCTCTTGTGTTGTGTTATTCTGTGCTGTTCTCTTCTC TTGTGTTGTGTGCTGTTTTCTTCTCTTCACTTCTCTTCCGTTGCGTTGTG TTGTGTTCTGTTCTGTTCTGTTTCTACTGTACAACATTTGTCTTTTAGCT GGTGAAAATTTGTTGTTCTGCTATGTGCTAGGCCGTTGTCTTGCTCTCGG CCATGTCCTCATCTGGGATAACTTCATCATTGGTTCTGTTATTTTCTTAA GGTTTTGGCTTGCTCTCTTCGCATGGTCTCCTTTTTGTGTGCTCATTTAC CTTGATCCCCCCCCCCCCATCTGTTCACCTCATTCACGTCTCCCCCTAAC GAGCTCGATGGTCAAGTCGTTCGAGGTGTGCCAGCTTCCTTGACCCCCCC CCAATTATCTCATTCGCGTCTCCCCCAGGCGAGCTCGATGGTCAAGTCTT TCGAGGTGTGCCAGCTGCCGGTCCGGTGCGCGCGCTTCATCGTGAGGAAG CAGTGGTTCATCACGGCTAGCGACGACATGCACATCCGCGTCTTCAACTA CAACACCATGGAGAAGGCAAGAGACGAAGGAAGGAAACCTGTTTCCGTTT TTAGTTTCCGTTTCCGTTTTCGTTATACGGTACGGTAGCCATCATACGGA TGCATCATCATCACCGTGCAGAAATGCCAATGCAGTATGCTTTTGTTTTG TTCTCCCACTGCATGAAACACCGTGGACAAGACAAAGGAAGGCTGTTTTC GTTTTATATTTTGGTCTCTAATATTTGTACATTCGTCAGACGGTGCCTAT CTTACTTCTGCACATGTACCAGTGATTGTTCCTTGTATTGTTCCACGCGT GGGAAGCCCACGCCGACTACACCCCCGCCCCCCCGATTAGTAACATTTTT GACCCCCCCCCTTCCCCCGGTTAGATCCAAGCGTGGGAGGCCCACACGGA CTACATCCGCTACCTGGAGATCCACCCGACTCTGCCGTACGTGCTGTCCG CCTCCGACGACATGAGCGTCAAGCTCTGGGACTGGGAGAGGCAGTGGGAC TGCACGCAGGTACAGCAGTCGTTGCTCCGATGTTCGAGGGTGGGCGCGAC AAAGGCCCTCGACCGCCTTATACCGGACTCAGAGAGTACCCATATAATGC TTGTAAGAGAGTCGAGTGCGTGAAAACCGATGATTTCGACCCCCTTGTAT CGGAACCCCCTATTTTAAGGTACCCTCTTTTTTATAGTTTAAGTTCGCCC TTCCTTCACGGATCCACAACTTCACCGACGTCTTTGTGAAGTACATCGGC GCTGTCCATGCTGTTGTAAAGGAAGACAAGCCTGCCCACACATGTTGCTT CGCAATGGTTGTGTTGTTCCGTTTGGTGGGAACAACAACACAAGCACAGC TGTACCCATAAAAGTTGTTTTCTGATGGTTTCGTTGTTGCGTGTGGTGGG AACAACTACTAATACACGTGGTGCAGGTGTTCGAGGGCCACTCCCACTAC GTGATGATGGTGAAGTTCAACCTCAAGGACTCCAACACCTTCGCAAGCGC TTCCCTCGACAGGTGAGCCATCACGTATCATCTCCTCGGCGCCCACCGCT TCGGTGTTCATTTTCTTCTTTTGTTTGGACTTGCCTTCCAAAGCCAGCCC CCGCCCCAAGAATTGTATAAAAAGCGAAATCTCTCGTTGTTTTTTGCACC ACGGGTACCCACTTCCTTCTTTAGCAGACTTGAGGGCGTGTGTCGTGTGT CCTTGCCGTCCTTTTTTTTTCTTCTCTTGGTTGTGTTTTGCATGCACACG AAAAGGTCTCTCTCTCTCTCTCTCTTGCTTTTTGGTGTTGAATGTTGAAT GTACAACAGTGCCAGCATTTATTGAAAACACACCGCTGCCCCACCCACCC ACCCACCCACCCACATCCACCTCTTCAACTTGTGTGTGCCCCCCCCCACG TGCCGGCACGGCATGTCCCGGCACGGCATGGCACAGGCGTCGTCGCCATC ATCACCGCGCCCGACAGCAGTTGATTCTCTTCTTTTCCTTTCCTTTTCTC TCCTTTTTTTTGTTTCTTTTCTTTTTCTTCTTCTTCTCTTGTTTGTTTTC CCTTCCTTCCCTTCCCTTTCATTTGACTCTCCTCTATTTCTCTTCCTTTC CTCTTCTTTGTTTTCAATTAATTGAAATGTTTTCTTCTTCTCTTTCTCTT TCTCTTTCCCTTTTCCTTTTCAATTGATCCTCTCCTTTCCTTTCCCTTCC TTTCCTTTCCCTTCCTTTCCTTTCCCTTCCTTTCCTTTCCCTTCTTTTCC TTTCCTCCGCAGGAGCGTGAAGGTCTGGGGCCTCGGCGCTCCCACACCTC ACTTCTCCCTGGAGGGCCACGAGAGGGGGGTCAACACGATCGACTACTAC CCCGGCGGGGACCGCCCCTACCTACTCTCGGGTATGAACGAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8475:3887..6528+

>mRNA_E_fasciculatus_S2_contig8475.16602.1 ID=mRNA_E_fasciculatus_S2_contig8475.16602.1|Name=mRNA_E_fasciculatus_S2_contig8475.16602.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=624bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8475:3887..6528+ (Ectocarpus fasciculatus EfasUO2)
CAGCCGCTTCGTTTGGAGATCAAGAAGCTCCTCTCCTCCCGGTCCGACCG
CGTCAAGTGCGTCGACATCCACCCCACCGAGCCGTGGGTGCTCAGCGCTC
TCTACAACGGCCATGTCTTCATCTGGGATTACCAGGCGAGCTCGATGGTC
AAGTCTTTCGAGGTGTGCCAGCTGCCGGTCCGGTGCGCGCGCTTCATCGT
GAGGAAGCAGTGGTTCATCACGGCTAGCGACGACATGCACATCCGCGTCT
TCAACTACAACACCATGGAGAAGATCCAAGCGTGGGAGGCCCACACGGAC
TACATCCGCTACCTGGAGATCCACCCGACTCTGCCGTACGTGCTGTCCGC
CTCCGACGACATGAGCGTCAAGCTCTGGGACTGGGAGAGGCAGTGGGACT
GCACGCAGGTGTTCGAGGGCCACTCCCACTACGTGATGATGGTGAAGTTC
AACCTCAAGGACTCCAACACCTTCGCAAGCGCTTCCCTCGACAGGAGCGT
GAAGGTCTGGGGCCTCGGCGCTCCCACACCTCACTTCTCCCTGGAGGGCC
ACGAGAGGGGGGTCAACACGATCGACTACTACCCCGGCGGGGACCGCCCC
TACCTACTCTCGGGTATGAACGAA
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