mRNA_E_fasciculatus_S2_contig8420.16553.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8420.16553.1
Unique NamemRNA_E_fasciculatus_S2_contig8420.16553.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: HSF_DOMAIN (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S6_9PHAE)

HSP 1 Score: 666 bits (1719), Expect = 2.490e-230
Identity = 449/614 (73.13%), Postives = 472/614 (76.87%), Query Frame = 1 
Query:    7 NQPPRQTSTKRGGGSSGYRKQAEGDRNVGLPVGAGXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------APASFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEDSCEFKHQNFRKGQRHLLGLIRRKAHSTSANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGIRHHDSHSVAVQETKGSVDRIAIDLRAMCNRVAHLEAEMGMIKHRHELLRTESGELLRLILSEGGRRLEEKALAVLGQLPHTSGELELSELRSLGLHPEDHQQEQHXXXXXXXXXXXXTDERGPTPMPEQQPPARCRGSSLGGERFVAGGAVEDGDSSARGGGGVGAAARYSRSGAALASVVAAELASNASEEDGEADSSSTRAPSGAPHDPSRPPLGGPGREIAWAGMGPNVDLSSPSRGFATAPAFSGPAAAGSGNGAAEFGXXXXXXXXXSREGAARLSSDIAAARHGSRAPPVDDRGPSTTAWAADAXXXXXXXXSLPQGSSDMGAPRYS-LYSVRGERQQVEAGRGVARAEKRPIRGSGEGGTPGERGGGAGQNGADSSGTAVGRSKRRAV 1794
            N+PP QT T RGGGSSG R QAEG RN+ +PVG+G              XXXXXXXXXXXX                 APASFLDKLWNILNEPHLSKHITWN+DGDGI++N+PAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEDSCEFKHQNFRKGQRHLLGLIRRK HS SA+ XXXXXXXXXXXXXXXXXXXXXX       SAGIRHHDSHSV  QETKGSVDRIA++LRAMCNRV HLEAE+G+IKHRH  LR ES  LLRL+LSEGGRRLEEKALAVLGQLPHTSGE ELSEL  LGL PEDH+Q     XXXXXXXXXX D RGPTPMPE++P A  RG S GGERFVAG A EDGD +ARGGG VGAA  YSRSGAALASV+AA L SNASEEDGEAD        GA HDP RP LGGPGR  AW GM PN+DLSSPSRG ATA  FSGPA  GSGNGAAEFG         S EGAA LSSD AAA HGSRAPPVDDRG ST   A  A        S PQGSS    PR + LYSVRGER+QVEAGRGV R EKRP RGSGEGGTPGE GGG GQNGAD SG+ V RSKRRAV
Sbjct:    2 NKPPPQTPTSRGGGSSGGRNQAEGGRNLVVPVGSGGAATAVGAAAAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPASFLDKLWNILNEPHLSKHITWNKDGDGILINYPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEDSCEFKHQNFRKGQRHLLGLIRRKGHSMSASNXXXXXXXXXXXXXXXXXXXXXXGSP----SAGIRHHDSHSVTAQETKGSVDRIAVELRAMCNRVTHLEAEIGLIKHRHNHLRAESQVLLRLLLSEGGRRLEEKALAVLGQLPHTSGEAELSELPYLGLRPEDHEQ-----XXXXXXXXXXXDARGPTPMPEERP-AHFRGRSFGGERFVAGDAAEDGDPTARGGG-VGAAG-YSRSGAALASVIAAALVSNASEEDGEAD--------GALHDPPRPRLGGPGRGTAWGGMAPNIDLSSPSRGLATA-TFSGPATGGSGNGAAEFGGSGNASCNGSEEGAAWLSSDAAAASHGSRAPPVDDRGRSTAPVARAAEPAAAGGGSRPQGSS----PRSNYLYSVRGEREQVEAGRGVVRTEKRPNRGSGEGGTPGEWGGGGGQNGADHSGS-VARSKRRAV 589
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BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: Heat (Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT89_ECTSI)

HSP 1 Score: 624 bits (1610), Expect = 3.930e-214
Identity = 434/622 (69.77%), Postives = 450/622 (72.35%), Query Frame = 1 
Query:    7 NQPPRQTSTKRGGGSSGYRKQAEGDRNVGLPVGAGXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------APASFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEDSCEFKHQNFRKGQRHLLGLIRRKAHSTSANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGIRHHDSHSVAVQETKGSVDRIAIDLRAMCNRVAHLEAEMGMIKHRHELLRTESGELLRLILSEGGRRLEEKALAVLGQLPHTSGELELSELRSLGLHPEDHQQEQHXXXXXXXXXXXX----TDERGPTPMPEQQPPARCRGSSLGGERFVAGGAVEDGDSSARGGGGVGAAARYSRSGAALASVVAAELASNASEEDGEADSSSTRAPSGAPHDPSRPPLGGPGREIAWAGMGPNVDLSSPSRGFATAPAFSGPAAAGSGNGAAEFGXXXXXXXXXSREGAARLSSDIAAARHGSRAPPVDDRGPSTTAWAADAXXXXXXXX----SLPQGSSDMGAPRYS-LYSVRGERQQVEAGRGVARAEKRPIRGSGEGGTPGERGGGAGQNGADSSGTAVGRSKRRAV 1794
            N+PPRQTST RGGGSSG +KQAEGDRN+   +G G              XXXXX    XXX                 APASFL+KLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDE+SCEF+HQNFRKGQRHLLGLIRRKAHSTS                                           VA QETKGSVDRIA++LRAMCNRV HLEAEMGMIKHRH  LR ES  LLRL+LSEGGRRLEEKALAVLGQLPHTSGE ELS L S+ LHPEDH+QEQHXXXXXXXXXXXX    TDERGP PMPE+ PPA  RGS LGGERF AGGA E GD +ARGGG VGAA RYSRSGAALASVVAA LASNASEED             A HDP RP LGGPGRE AW GM PNVDLSSPSRG ATA  FSGPAAAGSG GAAEFGXXXXXXXXXS EGAARLSSD AAA  GSRAPPVDDRG STTA A   XXXXXXXX    SLPQGSS    PR S LY+VRG R+QVEAGRG          GSGEGGTPGERG    QNGAD SGT V R KRRAV
Sbjct:    2 NKPPRQTSTSRGGGSSGDKKQAEGDRNLVKHIGGGGAATAVGAAAAPTPXXXXXAGGRXXXXXXXXXXXXXXXXXXXXAPASFLNKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEESCEFQHQNFRKGQRHLLGLIRRKAHSTS-------------------------------------------VAAQETKGSVDRIAVELRAMCNRVTHLEAEMGMIKHRHNHLRVESRALLRLLLSEGGRRLEEKALAVLGQLPHTSGEAELSGLPSVVLHPEDHEQEQHXXXXXXXXXXXXXXQYTDERGPIPMPEE-PPAHFRGSDLGGERFGAGGAAEVGDPTARGGG-VGAA-RYSRSGAALASVVAAALASNASEEDXXXXXXXXXXXXXALHDPPRPRLGGPGRETAWGGMAPNVDLSSPSRGLATA-TFSGPAAAGSGTGAAEFGXXXXXXXXXSEEGAARLSSDAAAASKGSRAPPVDDRGRSTTAVARXXXXXXXXXXXXXXSLPQGSS----PRCSYLYAVRGGREQVEAGRGGXXXXXXXXXGSGEGGTPGERGXXXXQNGADHSGT-VARGKRRAV 571
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BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: Si:dkey-18a10.3 (n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1G7L3_CYPCA)

HSP 1 Score: 103 bits (256), Expect = 4.180e-22
Identity = 51/103 (49.51%), Postives = 66/103 (64.08%), Query Frame = 1 
Query:  199 SFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDD------DGDEDSCEFKHQNFRKGQRHLLGLIRRK 489
            +F+ KLW ++  P     I W+QDG   +V    +F+K VLP Y+KH+N  SFVRQLN+YGFHK  H D      D   D  EF+H+NF++ Q HLLGLIRRK
Sbjct:   15 AFVSKLWALVEAPSTDNLICWSQDGCSFLVQDEQRFSKEVLPLYFKHSNMTSFVRQLNMYGFHKVVHMDAGLPKADSQVDCVEFQHENFQRAQPHLLGLIRRK 117
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: Si:dkey-18a10.3 (n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1UXT7_CYPCA)

HSP 1 Score: 104 bits (259), Expect = 1.240e-21
Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 1 
Query:  199 SFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDD------DGDEDSCEFKHQNFRKGQRHLLGLIRRK 489
            +F+ KLW ++  P     I W+QDG   +V    +F+K VLP Y+KH+N  SFVRQLN+YGFHK  H D      D   D  EF+H+NF+K Q HLLGLIRRK
Sbjct:    9 AFVSKLWALVEAPSTDNLICWSQDGCSFLVQDEQRFSKEVLPLYFKHSNMTSFVRQLNMYGFHKVVHMDAGLSKADSQVDCVEFQHENFQKAQPHLLGLIRRK 111
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: Si:dkey-18a10.3 (n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672NZZ5_SINGR)

HSP 1 Score: 102 bits (253), Expect = 1.580e-21
Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 1 
Query:  199 SFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDD------DGDEDSCEFKHQNFRKGQRHLLGLIRRK 489
            +F+ KLW ++  P  +  I W+QDG   +V    +F+K VLP Y+KH+N  SFVRQLN+YGFHK  H D      D   +  EF+H+NF++ Q HLLGLIRRK
Sbjct:   15 AFVSKLWTLVEAPSTNDLICWSQDGCSFLVQDEQRFSKEVLPLYFKHSNMTSFVRQLNMYGFHKVVHMDAGLPKADSQVNCVEFQHENFQRAQPHLLGLIRRK 117
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G5V1_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.590e-21
Identity = 65/203 (32.02%), Postives = 106/203 (52.22%), Query Frame = 1 
Query:  193 PASFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEDSCEFKHQNFRKGQRHLLGLIRRKAHSTSANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAGIRHHDSHSVAVQETKGSVDRIAIDLRAMCNRVAHLEAEMGMIKHRHELLRTESGELLRLILSEG 801
            PA+FL+KL++IL +   S+HI W+ +G  I++     FAK+VLPK++KH+N+QSFVRQLN+Y F KTRHD +      EF+  NF++G+R++L  I+RK   TSA                                            + +    +D +  DL    NR+A +EA + M   +  ++++E+  L +L++ +G
Sbjct:   93 PAAFLEKLYDILEDTIYSEHICWSMEGQSILIKKVDSFAKSVLPKFFKHSNFQSFVRQLNMYAFSKTRHDPNW----REFRQPNFQRGKRNMLKFIKRKTSDTSAMAKQTRSR------------------------------------LDDVVSEMDIVKKDLLGAKNRLALVEAHLWMTNDKCNVMQSENQNLWKLLIEKG 255
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BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: Winged (helix DNA-binding domain-containing protein (Fragment) n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316V749_9BASI)

HSP 1 Score: 100 bits (248), Expect = 1.610e-21
Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = 1 
Query:  199 SFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEDS----CEFKHQNFRKGQRHLLGLIRRK 489
            SF+ KL+++L +  + + I W   G    V +PA+FAK VLP ++KH+N+QSFVRQLN+YGFHK  H   G  +      EFKH NFR+G+ HLL  I+RK
Sbjct:    1 SFVSKLYSMLEDDTIEEMIAWGPSGTTFSVANPAEFAKVVLPNWFKHSNWQSFVRQLNMYGFHKVNHTYQGTPEEEIQVWEFKHPNFRRGEVHLLSEIKRK 101
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: Si:dkey-18a10.3 (n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2I2H2_CYPCA)

HSP 1 Score: 104 bits (259), Expect = 2.100e-21
Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 1 
Query:  199 SFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDD------DGDEDSCEFKHQNFRKGQRHLLGLIRRK 489
            +F+ KLW ++  P     I W+QDG   +V    +F+K VLP Y+KH+N  SFVRQLN+YGFHK  H D      D   D  EF+H+NF+K Q HLLGLIRRK
Sbjct:    9 AFVSKLWALVEAPSTDNLICWSQDGCSFLVQDEQRFSKEVLPLYFKHSNMTSFVRQLNMYGFHKVVHMDAGLPKADSQVDCVEFQHENFQKAQPHLLGLIRRK 111
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: Heat (shock factor 1-like protein n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498LEZ8_LABRO)

HSP 1 Score: 107 bits (268), Expect = 4.120e-21
Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 1 
Query:  199 SFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDD------DGDEDSCEFKHQNFRKGQRHLLGLIRRK 489
            +F+ KLW ++  P  +  I+W+QDG   +V    +F+K VLP Y+KH+N  SFVRQLN+YGFHK  H D      DG  +  EF+H+NFR+ Q HLLGLIRRK
Sbjct:    9 AFVSKLWTLVEAPSTNNLISWSQDGGSFLVQDEQRFSKEVLPLYFKHSNMTSFVRQLNMYGFHKVVHMDAGLPKADGQVNCVEFQHENFRRAQPHLLGLIRRK 111
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Match: Si:dkey-18a10.3 (n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2E852_CYPCA)

HSP 1 Score: 100 bits (250), Expect = 6.360e-21
Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = 1 
Query:  199 SFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPAQFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDD------DGDEDSCEFKHQNFRKGQRHLLGLI 480
            +F+ KLW ++  P  +  I W+QDG   +V    QF+K VLP Y+KH+N  SFVRQLN+YGFHK  H D      DG  +  EF+H+NF++ Q HLLGLI
Sbjct:    9 AFVSKLWTLVEAPSTNDLICWSQDGCSFLVQDEQQFSKEVLPLYFKHSNMTSFVRQLNMYGFHKVVHMDSGLPKSDGQVNCVEFQHENFQRAQPHLLGLI 108
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8420.16553.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
HSF_DOMAIN2.490e-23073.13domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Heat3.930e-21469.77Shock transcription factor n=1 Tax=Ectocarpus sili... [more]
Si:dkey-18a10.34.180e-2249.51n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1G7L... [more]
Si:dkey-18a10.31.240e-2150.49n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1UXT... [more]
Si:dkey-18a10.31.580e-2148.54n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID... [more]
Hypothetical1.590e-2132.02protein n=2 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Winged1.610e-2148.51helix DNA-binding domain-containing protein (Fragm... [more]
Si:dkey-18a10.32.100e-2150.49n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2I2H... [more]
Heat4.120e-2150.49shock factor 1-like protein n=1 Tax=Labeo rohita T... [more]
Si:dkey-18a10.36.360e-2149.00n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2E85... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8420contigE_fasciculatus_S2_contig8420:308..6589 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop1
Start1
Seed ortholog score104.0
Seed ortholog evalue2.5e-19
Seed eggNOG ortholog7918.ENSLOCP00000018534
Model size2403
KEGG koko:K09414
KEGG Pathwayko04212,ko05134,map04212,map05134
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Si dkey-18a10.3
EggNOG OGs3A0U4@33154,3BPZU@33208,3D6M1@33213,48EEJ@7711,49ASP@7742,4A7H4@7898,COG5169@1,KOG0627@2759
Ec32 ortholog descriptionHeat shock transcription factor
Ec32 orthologEc-06_003680.1
Cds size1797
COG Functional cat.K
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8420.16553.1prot_E_fasciculatus_S2_contig8420.16553.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8420 308..5983 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842501.1674132-CDS-E_fasciculatus_S2_contig8420:307..3821696842501.1674132-CDS-E_fasciculatus_S2_contig8420:307..382Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8420 308..382 +
1696842501.1835585-CDS-E_fasciculatus_S2_contig8420:2044..22361696842501.1835585-CDS-E_fasciculatus_S2_contig8420:2044..2236Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8420 2045..2236 +
1696842501.1940477-CDS-E_fasciculatus_S2_contig8420:2557..26561696842501.1940477-CDS-E_fasciculatus_S2_contig8420:2557..2656Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8420 2558..2656 +
1696842501.2042568-CDS-E_fasciculatus_S2_contig8420:3333..36001696842501.2042568-CDS-E_fasciculatus_S2_contig8420:3333..3600Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8420 3334..3600 +
1696842501.2149346-CDS-E_fasciculatus_S2_contig8420:3742..38171696842501.2149346-CDS-E_fasciculatus_S2_contig8420:3742..3817Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8420 3743..3817 +
1696842501.2275662-CDS-E_fasciculatus_S2_contig8420:4367..45051696842501.2275662-CDS-E_fasciculatus_S2_contig8420:4367..4505Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8420 4368..4505 +
1696842501.240879-CDS-E_fasciculatus_S2_contig8420:5032..59831696842501.240879-CDS-E_fasciculatus_S2_contig8420:5032..5983Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8420 5033..5983 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842501.2518015-UTR-E_fasciculatus_S2_contig8420:5983..65891696842501.2518015-UTR-E_fasciculatus_S2_contig8420:5983..6589Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8420 5984..6589 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8420.16553.1

>prot_E_fasciculatus_S2_contig8420.16553.1 ID=prot_E_fasciculatus_S2_contig8420.16553.1|Name=mRNA_E_fasciculatus_S2_contig8420.16553.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=599bp
MNNQPPRQTSTKRGGGSSGYRKQAEGDRNVGLPVGAGAGGGGGGGGGGGG
GGTRGGKRGGEAGAPASFLDKLWNILNEPHLSKHITWNQDGDGIVVNHPA
QFAKAVLPKYYKHNNYQSFVRQLNIYGFHKTRHDDDGDEDSCEFKHQNFR
KGQRHLLGLIRRKAHSTSANNNGNNNNNNSSSNSSSNSSSSSSNHNGSSN
SAGIRHHDSHSVAVQETKGSVDRIAIDLRAMCNRVAHLEAEMGMIKHRHE
LLRTESGELLRLILSEGGRRLEEKALAVLGQLPHTSGELELSELRSLGLH
PEDHQQEQHHQYDQHHQHYQHTDERGPTPMPEQQPPARCRGSSLGGERFV
AGGAVEDGDSSARGGGGVGAAARYSRSGAALASVVAAELASNASEEDGEA
DSSSTRAPSGAPHDPSRPPLGGPGREIAWAGMGPNVDLSSPSRGFATAPA
FSGPAAAGSGNGAAEFGGSGNASFSGSREGAARLSSDIAAARHGSRAPPV
DDRGPSTTAWAADAAAAAGGGGSLPQGSSDMGAPRYSLYSVRGERQQVEA
GRGVARAEKRPIRGSGEGGTPGERGGGAGQNGADSSGTAVGRSKRRAV*
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mRNA from alignment at E_fasciculatus_S2_contig8420:308..6589+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8420.16553.1 ID=mRNA_E_fasciculatus_S2_contig8420.16553.1|Name=mRNA_E_fasciculatus_S2_contig8420.16553.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6282bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8420:308..6589+ (Ectocarpus fasciculatus EfasUO2)
ATGAATAACCAGCCGCCGCGGCAAACATCAACTAAACGTGGTGGTGGCTC
TTCGGGCTACAGGAAGCAGGCGGAGGTGAGAGACAGAGAGCTGCTGCTGT
GTGCCCACCGATTTGGGAGTAGCAGTCGACGAGAGCGCGCCACCGGTCCA
TCATCACTGCTGCGGCTTGTGCCCATACACGAATCATCACCACCACGCGG
CGAAATAGAACGGAGAAAGGAGAACGGATGTTTTGTCTCTGCGTCACCCA
CGAAATCCCCCGCCTCCTGCCAGGCCCGAAATAGCTGGTGAGCTGGTGGC
GAACACGTGACGAGTGGGGCTCACACTCAGCCGAGATTGGCAGAAAACTC
GTGGGCTAGGTTATGTTTGCAGTGCAGGAGCGCGATTCGATCGCCCGCTG
GCATCAGCGGTTCAGAAAGGAGCAGAAAACACGCGATCGCGAGAGAGAAG
CACGTGTTCTACAGTACGACCTTCTAGAAGGAACACGGATCCATCGATGC
ACAGCAGCAATAATACATGTAGTTTCGCGGTGTGTGGGCAGCTTCTACCT
GGTGAAGAGAAAACCTTCCTGCACAAGTTCACTTCCGACCTCGATGTCAC
ATCACACCAAGCTTTCCTCCCGGCTGGTGCTCGTAGCCACAGCTTGTGAG
CCACAGGCATAGGCATACTGCTTTGTCCCTCTGAAGCGGCGCAATTTCCT
CCAACTGCAAAAATTAAAATTTCGCCCGAACTTCAATCTTCGTTCGGAGT
GCAACTGCTGTCGTCACCGTGTTGAAGTACAATTATTCGGCGGCGGGCAG
GCACGATATCGTCGACACTAATTAAGAGCACGAGACAATATTGACCAAAC
TGGGACTGTCGACAGGAGCCCTTCGGTATTGCCGCCACCGGCACTATAAT
AGTAGTGCTGACGCTGAGTGGAATGTCGAAATGGCGTGCGTGCGTTCGCT
ACGTGTACAGATGGAGACGTGCAGGAACACCCCGCCACCACACAAAGGAA
CTTCTCCGTCTCATCGATAAAGATAGGTAGATAGGTAGGTGATGCGGCGA
TACAAGATCAAGACTGCACATGCCCCGAAACTCACCCGGTCACATTTTTG
TTACGCCAGAGCAGTGTCGTCACCGGACTGCTGTGTTACTGTCGAACTTC
GCAACGCTCCAATAAAAAGATCTGTGTTGCGTAATCGAGCCGCATTGAGC
ATTTTGCTTCCGTGCCCTCGTCCCTCCTCCTGGCTCGTGTCCGTAAATAT
ACTACTTATAGCATAGCATAGAAGAGCTGTCGTCTCTTAAGCCGAGACCC
TTCCCTCTTCACTCTTCCCTCTGCATCAACACGTGTAGTGTAATGGCCTC
ATAGGCCTGATTGCCTACCCCTATTTAGGCTTTTACTCCAACACCGCCAC
TCGAAGTTGGCACAAGACTACATGCACACAACAACGCCCGTGTGGTCGTG
TTTTCTTTTTCTGTGCCCCTCCTCCTAGTGGCCAAAGTGCCCCCCTTCAA
CAAAGATCCTTTGGGTCTTGCTTCGGCTCCGCCGTTCGTGTCTTTCTTGA
CGCTGACAAAAGGCGCAGGCATTTCACACGGAAGGCAAAGCTAGACCTCT
CTTGTCCCCAACCTAGCCTGTCTTCTGCCGACAATATTTTGTCCTTTTGT
CGACACGTTCGAATGAGACTGTGTGACCGTCATCCAGCACTATATAGTAC
ACCCACACGTTTCGATATGTTCCCTTTCCCGCCCCAGGGAGACCGGAATG
TTGGTCTGCCCGTCGGAGCTGGAGCAGGCGGCGGCGGCGGTGGCGGTGGC
GGCGGTGGCGGTGGCGGCACGAGGGGGGGTAAGCGCGGCGGGGAGGCCGG
AGCGCCGGCGTCTTTCTTGGACAAGCTGTGGAACATTCTCAACGAGCCAC
ACCTGTCGAAACACATCACTTGGAACCAGGTGTGTTTTATTTTCCTAGTT
AACAAGGATTGTGACGTTTGTGATATACTTACAGCACGCTCGTTTTCGCC
AGAGGTGTTTTGCGTGATGCGCCGTACCTGTGTGTGCGGTCCAACTCATG
CACACACAATCGTGTAGGGCACCACTTTTTCCCCCATGTGCGTGCACGGC
ATGTTCAGGTACGTAGTTTGCTGTGGCCTACAAGCGTAGGCGTGCGTGCG
CGTGCCCGCGTGCATGACACGTCAGGTGGGTGGGTGCTTCGCTTAATTTG
TTTTGTTGTCTTCACCGCCGCTGCTGCGGTTGTTTTCTACTCGGCGGCAG
GACGGCGACGGCATCGTCGTCAACCACCCGGCCCAGTTCGCGAAGGCCGT
GCTCCCCAAGTACTACAAGCACAACAATTACCAGTCCTTCGTTCGCCAGG
TGGGTGGCTGGGTCGTAGCCTCCGAGCCAAGTTGGCTAGCCCATGGTAGC
AAAGTGCTCGCTGGCTCCATCCTACCCTTGACCAAGACCTTTTCTTCTTC
GACGCGGCCTCGCGTTATTTTTGGCCAAGACCTTTTCTTCTTGAAGACTG
CTTTAGGCAGAGCACCACAGGGTTGTGTTTGGACTGTTTACACACTAGCC
TACGTAGTTCTAGTCTACCCTGAGCTACTTTCTTGGGGTGACGCTGGCTT
CGGTTGCGCTGGGCGTTTCGTGCATAGGTCTCGGCGAACGACAAAAAAAT
AGTGGTTGATCGTCGTAGTTTCTGGTGCAGCGCGTGCTGGTCATCCCCCC
AGCGTAGCTTTGGCATCGTCGACGAGATGTGCGCTCCATCCATAAACGAA
AAACAGTAATGGCTGGTCGCGCTCTCGCCTGCTAAATGCTGTTAACATGT
TGAGTTGCCCCGAAGACTGCTGTCCCCGTTGTCAGGTTGCGCACGAACGA
CTTGTAAAGTTGTAGTAGAGCTTGGAACATACTAAAGTTGCAAGAGAGAA
AGGTGGGCAGTGGGCATCGGCTAGGTCGACTTCCGGGGCAACTGTTTTGC
TCGCTCTGTGATGGAGCCGATTGCTGTTGCGCCCGGCTACCTCTGAGCTC
GACCTGTCCGTCGTGTGTCTGTGCAGCTCAACATCTACGGCTTTCACAAG
ACGAGGCACGACGATGACGGCGATGAGGACTCCTGCGAGTTCAAGCACCA
GAATTTCAGGAAAGGACAACGGCACCTACTGGGCCTGATCCGCCGGAAGG
CTCACAGCACAAGCGCTAACAACAACGGCAACAACAACAACAACAACAGC
AGCAGCAACAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAATCACAATGG
TTCCAGCAACTCGGCTGGCATCAGGCACCACGATAGCCACAGCGTGAGTG
TTTTGGCTTGCCTGCGGGAACAGAGTTTGCGCGTGGGTCACGAGGGTTCA
GGAGAGGAAACCGTTGCCGAATTTGCGCACCGATTCCCGGCCCCGATACA
AGAGCGAACGTTTTTGTGTCGCGTCTTTCGCCCAGGTGGCGGTCCAGGAA
ACGAAGGGAAGCGTGGATCGCATCGCCATCGATCTTCGGGCCATGTGTAA
CAGAGTGGCGGTGAGGCTTGCTCGTGGAGTTGCCCTTCTGTGTGCATTGT
TTTGTTCAGTCCTGTTTTGTACTATCACCGCTCGCGGCTTCGATAACCAG
TTCCCATCATCGCTAAACTACGGTCTCGCTTCCGTAGTTGGAGAAGCTCG
ACCCGATGTCACCACGACTCATGATCACCTCAGTTGAACTCAAGCACAAT
AATTATAGTGGGGTGCGCGGCGTATTGCGGGAAGCCTGGTCGAGTTTCCA
GCTTTGCCCGGGGCCAGGTTCGGCAAGTCACGTTTTTTCGGCAAATTGTG
TATGTTTTGATGTATCAGCGACTGCCCGGTTGCTGTATTCGTCGACGGTC
GGCAAAAACGAGATGGAGGTATTTACCGTTCGGTGGCTAACCTAGTTAGT
TGGAGGGAGAGTTCGGAGACCATCGGATGCGGTTGTCTACGCTACCCTCA
TAGCACGCAGCAGATGCTCACGGTTTTTGGCAGCCCCAGCACTCACTCAT
GAGCCATGCCCGCTGCTCGGCCTGTTGTCATGGCGCTTTCCCGACGCGCG
CGTCTTGCAGCACCTGGAGGCCGAGATGGGCATGATCAAGCACCGCCACG
AGCTCCTCCGAACCGAGAGCGGAGAGTTGTTGCGACTTATACTGTCGGAA
GGGGGGCGGCGGCTAGAGGAAAAGGCTCTGGCGGTGCTTGGACAGTTGGT
GAGGGTTCACAATAATTTCCGGCTCTCCGTGAAGCTTCGAAAGTTGGTCG
TTTTTCGGCCGCCAAGGCTGATGCCATACTTCGATTAGGTGGTTTGAGTG
GATGGTTGTTGATCGGAAAAAGTGGATTGTTCGGTTGCTTGGGACGCTTG
GCGGAGTCGTTGTTTTGACCCGGATACGGGCTTGAATATTCCGTTAGGCC
TTTTGAGGTAAAACGTTTCTCTGGTCAATGCGCAGTTCATCGATTCGGTC
CATCGAGTCGATGAGCGCAGTATTGTTGACTCCGCACCTCCTCCCCCTCC
CACACCAGTTTTGAACGCAGGTATACAACCTACGTAACACCCACATCTAA
CAGCACAAAACTCAGCGACAAACGCAATCAAAACACNNNNNNNNNNGGTC
AGTATTCTTGAGTACGCGCCCTCCCCCCCCCCCCCAATATTTGGAGGGCG
AGGCTCGAAACCCCCTCCCCCCCCCCCCCCCCCCCCTTTTTTTTGAACCG
GTACCTTGTCCCGCCGCTGTCGAAGCCCCACACATCGGGCGAGCTAGAGC
TATCGGAGCTGCGGTCCCTCGGACTTCACCCGGAGGACCACCAACAAGAG
CAGCACCACCAATACGACCAACATCACCAACACTACCAACACACGGACGA
GAGAGGACCAACCCCGATGCCGGAGCAACAACCTCCTGCCCGTTGCCGCG
GCAGCAGCCTCGGCGGCGAGCGTTTCGTGGCGGGAGGCGCGGTAGAAGAT
GGGGACTCCTCGGCGAGAGGAGGAGGAGGGGTAGGTGCTGCTGCGAGGTA
CTCTAGGAGCGGCGCCGCGCTTGCGAGCGTCGTCGCAGCCGAGCTGGCTA
GCAATGCAAGCGAGGAGGACGGCGAAGCTGACAGCAGCAGCACCAGAGCC
CCCTCTGGGGCTCCCCACGACCCATCCCGACCGCCTCTTGGCGGTCCGGG
GCGGGAGATTGCTTGGGCCGGGATGGGGCCGAACGTCGACCTCTCGTCGC
CAAGCCGCGGTTTTGCCACTGCCCCCGCGTTTTCTGGTCCGGCCGCCGCT
GGCTCAGGAAACGGGGCTGCCGAGTTTGGCGGCTCTGGCAATGCTAGCTT
TAGTGGCAGTCGGGAGGGTGCGGCGCGGTTATCCTCGGACATAGCAGCCG
CTAGGCACGGTTCTCGGGCCCCTCCCGTCGACGATCGGGGCCCTTCAACG
ACGGCATGGGCGGCAGACGCGGCGGCGGCGGCGGGAGGAGGGGGCTCGCT
TCCCCAAGGTTCTTCGGATATGGGTGCACCGCGATATAGCTTGTACTCGG
TTCGTGGGGAAAGGCAGCAGGTGGAGGCAGGGAGAGGGGTAGCGAGGGCC
GAGAAGCGACCAATCAGGGGGAGTGGGGAAGGGGGCACGCCCGGAGAAAG
GGGTGGGGGGGCAGGGCAGAACGGAGCGGATTCTTCGGGAACTGCTGTGG
GAAGGAGTAAGCGAAGAGCTGTGTGATCGGGTCATGATTGTCTTGTGAAG
TAGGGCATTTCAACCTTGGTTATTGGTGGTGCTTGCTTCCTCGATCTGTA
CCACCGGCTTTAAAGATTGGCGATCGATGGTTGAACGAGGGGGGCGTTGG
ATCAGTGGGTGTGATGTTAGCAACCAGTTTTTATCCACTTTTTTAATGTA
CGCGTCTTTTACTTCGTGTCCGGTCTTCTGGAGGATATGTTTCGAAGCGA
TTTGGTACAATACAATCCTTTGTATTTCTACCACCGTCAATAAGGTTGCA
TCATCTGTGGGGGTGTTGTCGGTAGCGACTTCCCGCTCTTGTGCCGAGGG
GGCACCGTGAAAGCGACGGAAGGTCCATGAGTTCGTGTGTAACCGTCGCA
TGTGCAAAGGGTAGAGGGTGTGCTTCAAAACTGTACATTCACGTAAGTGT
GAAGACGTCGGCGTGGTTTACGCGCGTGTAGAAGTTCTGTTGTCAAAATT
CGTATTTGCTCGTGGGGCGACATACGGTAGAATATCTTGTTTGGTTCTAT
ATAAGCTGAGCATAAAATAAGCGGACTAGATGCGGCGTTTGGTGTAGATG
TAGATGTAACACGCTTGCCCTCGGGCTGCCTT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8420:308..6589+

>mRNA_E_fasciculatus_S2_contig8420.16553.1 ID=mRNA_E_fasciculatus_S2_contig8420.16553.1|Name=mRNA_E_fasciculatus_S2_contig8420.16553.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1797bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8420:308..6589+ (Ectocarpus fasciculatus EfasUO2)
ATGAATAACCAGCCGCCGCGGCAAACATCAACTAAACGTGGTGGTGGCTC
TTCGGGCTACAGGAAGCAGGCGGAGGGAGACCGGAATGTTGGTCTGCCCG
TCGGAGCTGGAGCAGGCGGCGGCGGCGGTGGCGGTGGCGGCGGTGGCGGT
GGCGGCACGAGGGGGGGTAAGCGCGGCGGGGAGGCCGGAGCGCCGGCGTC
TTTCTTGGACAAGCTGTGGAACATTCTCAACGAGCCACACCTGTCGAAAC
ACATCACTTGGAACCAGGACGGCGACGGCATCGTCGTCAACCACCCGGCC
CAGTTCGCGAAGGCCGTGCTCCCCAAGTACTACAAGCACAACAATTACCA
GTCCTTCGTTCGCCAGCTCAACATCTACGGCTTTCACAAGACGAGGCACG
ACGATGACGGCGATGAGGACTCCTGCGAGTTCAAGCACCAGAATTTCAGG
AAAGGACAACGGCACCTACTGGGCCTGATCCGCCGGAAGGCTCACAGCAC
AAGCGCTAACAACAACGGCAACAACAACAACAACAACAGCAGCAGCAACA
GCAGCAGCAACAGCAGCAGCAGCAGCAGCAATCACAATGGTTCCAGCAAC
TCGGCTGGCATCAGGCACCACGATAGCCACAGCGTGGCGGTCCAGGAAAC
GAAGGGAAGCGTGGATCGCATCGCCATCGATCTTCGGGCCATGTGTAACA
GAGTGGCGCACCTGGAGGCCGAGATGGGCATGATCAAGCACCGCCACGAG
CTCCTCCGAACCGAGAGCGGAGAGTTGTTGCGACTTATACTGTCGGAAGG
GGGGCGGCGGCTAGAGGAAAAGGCTCTGGCGGTGCTTGGACAGTTGCCCC
ACACATCGGGCGAGCTAGAGCTATCGGAGCTGCGGTCCCTCGGACTTCAC
CCGGAGGACCACCAACAAGAGCAGCACCACCAATACGACCAACATCACCA
ACACTACCAACACACGGACGAGAGAGGACCAACCCCGATGCCGGAGCAAC
AACCTCCTGCCCGTTGCCGCGGCAGCAGCCTCGGCGGCGAGCGTTTCGTG
GCGGGAGGCGCGGTAGAAGATGGGGACTCCTCGGCGAGAGGAGGAGGAGG
GGTAGGTGCTGCTGCGAGGTACTCTAGGAGCGGCGCCGCGCTTGCGAGCG
TCGTCGCAGCCGAGCTGGCTAGCAATGCAAGCGAGGAGGACGGCGAAGCT
GACAGCAGCAGCACCAGAGCCCCCTCTGGGGCTCCCCACGACCCATCCCG
ACCGCCTCTTGGCGGTCCGGGGCGGGAGATTGCTTGGGCCGGGATGGGGC
CGAACGTCGACCTCTCGTCGCCAAGCCGCGGTTTTGCCACTGCCCCCGCG
TTTTCTGGTCCGGCCGCCGCTGGCTCAGGAAACGGGGCTGCCGAGTTTGG
CGGCTCTGGCAATGCTAGCTTTAGTGGCAGTCGGGAGGGTGCGGCGCGGT
TATCCTCGGACATAGCAGCCGCTAGGCACGGTTCTCGGGCCCCTCCCGTC
GACGATCGGGGCCCTTCAACGACGGCATGGGCGGCAGACGCGGCGGCGGC
GGCGGGAGGAGGGGGCTCGCTTCCCCAAGGTTCTTCGGATATGGGTGCAC
CGCGATATAGCTTGTACTCGGTTCGTGGGGAAAGGCAGCAGGTGGAGGCA
GGGAGAGGGGTAGCGAGGGCCGAGAAGCGACCAATCAGGGGGAGTGGGGA
AGGGGGCACGCCCGGAGAAAGGGGTGGGGGGGCAGGGCAGAACGGAGCGG
ATTCTTCGGGAACTGCTGTGGGAAGGAGTAAGCGAAGAGCTGTGTGA
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