mRNA_E_fasciculatus_S2_contig837.16502.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig837.16502.1
Unique NamemRNA_E_fasciculatus_S2_contig837.16502.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG89_9PHAE)

HSP 1 Score: 816 bits (2109), Expect = 7.650e-293
Identity = 441/552 (79.89%), Postives = 468/552 (84.78%), Query Frame = 1 
Query:    1 MIHHRRVAQPEGGFDKKSRASSPHHSPPRDAGASTSGFAGRTRTAESEHGVPGSGGATAVDGYRPAPAAELAEGHC-SAPSNELPGGTSGAGDGVHRQRYWPKGRRLVGKTILATLAAGILTLLIASEGFTTMLGSPAMSPPPLSRRHGTAFDSAAQQAGDGD----------AGGAAGAAAWMETVAGCTGPEDGFVYGGEAGSVLTYVRKGREDGGDGGVAAAA---GHPSLPQVLRWFWSLKHERGVLAYEVAELSERRDVGEETGWEVVFASNIGRHKPFPPAGPAEVPWDPSAFNFYKASPLEFVLSYMPSFRYERKTAAXXXXXXXXXXGRRTQVEDNGVVSIETDAKAVGSTEAKAARGAAAVGESKAVTISASLRGGEVGLPIKLDGAEPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQARGMKAASTLCWYFDAGPGGLAIESSKTRHLATVPLRHSSFTPPAEGENAADKEDTLEVHVLQGYPIRALV 1614
            MIHHRRVAQPEGG D +S AS PHHSP R AGAS+S FAGRTRTA +EHG+P     TAVDG RPAPA ELAEGHC SAP+NE  GGTSGAGDGVHR+RYWP GRRLVGKTIL TLAAG LTLL+AS+G TTMLGS A SP PLS RH T FDSAAQQ G  D          AGGAAG AAW+ETVAGCTGPEDGFVYGGEAGSVLT+VRKGREDGGD GVAAAA   GHPSLPQVLRWFW+LKHERGVLAYEVAEL+ERRDVG+ETGWEVVFASN+GRHKPFPPAGPAE PWDP AFNFYKASPLEFVLSY PSFRYER+ AA XXXX     GRRTQ EDNG V +E D +A GS  AKAARG+AAVGE K VTI+++ RGG VGL + +DG  PAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA G       CWYFDAGP GLAIESSKTRHLATVPL  +SF+P A+GENAADKED+LEVHVLQGYPIRALV
Sbjct:    1 MIHHRRVAQPEGGSDTQS-ASRPHHSPRRGAGASSSSFAGRTRTAVTEHGIPHGATHTAVDGNRPAPAVELAEGHCCSAPANEPAGGTSGAGDGVHRERYWPNGRRLVGKTILGTLAAGTLTLLVASDGLTTMLGSSAKSPRPLSHRHRTVFDSAAQQTGRYDYGGRDATGRGAGGAAGTAAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAAAAAAAGHPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWEVVFASNVGRHKPFPPAGPAESPWDPYAFNFYKASPLEFVLSYTPSFRYEREIAAAXXXX-----GRRTQAEDNGGVLVEADVEAAGSAAAKAARGSAAVGEGKTVTITSARRGGGVGLQMNVDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQAAG-------CWYFDAGPRGLAIESSKTRHLATVPLSRASFSPSAKGENAADKEDSLEVHVLQGYPIRALV 539
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BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G939_ECTSI)

HSP 1 Score: 667 bits (1722), Expect = 1.990e-235
Identity = 363/441 (82.31%), Postives = 383/441 (86.85%), Query Frame = 1 
Query:  343 LAAGILTLLIASEGFTTMLGSPAMSPPPLSRRHGTAFDSAAQQAG----------DGDAGGAAGAAAWMETVAGCTGPEDGFVYGGEAGSVLTYVRKGREDGGDGGVAAA----AGHPSLPQVLRWFWSLKHERGVLAYEVAELSERRDVGEETGWEVVFASNIGRHKPFPPAGPAEVPWDPSAFNFYKASPLEFVLSYMPSFRYERK---TAAXXXXXXXXXXGRRTQVEDNGVVSIETDAKAVGSTEAKAARGAAAVGESKAVTISASLRGGEVGLPIKLDGAEPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQARGMKAASTLCWYFDAGPGGLAIESSKTRHLATVPLRHSSFTPPAEGENAADKEDTLEVHVLQGYPIRALV 1614
            L++G LTLL+ASEG TT+LGSPA SPPPLS RH T FDSAAQQ G            DAGGAAGAAAW+ETVAGCTGPEDGFVYGGEAGSVLT+VRKGREDGGD GVA      AGHPSLPQVLRWFW+LKHERGVLAYEVAEL+ERRDVG+ETGW VVFASN+GRHKPFPPAGPAE PWDPSAFNFYKASPLEFVLSY PSFRY R+    A+XXXXXXXXXXGRRTQ +DN  VS+ETDAKA GST AKAARGAA VGE KAV I+++LRGG VGLP+KLDG  PAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGY HSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQ          CWYFDAGPGGLAIESSKTRHLATVPL  SSF+PPAEGENAADKED+LEVHVLQGYPIRALV
Sbjct:   20 LSSGTLTLLVASEGLTTILGSPARSPPPLSHRHRTVFDSAAQQTGRYDYGGRDATGRDAGGAAGAAAWIETVAGCTGPEDGFVYGGEAGSVLTFVRKGREDGGDSGVAXXXXXXAGHPSLPQVLRWFWNLKHERGVLAYEVAELNERRDVGQETGWGVVFASNVGRHKPFPPAGPAESPWDPSAFNFYKASPLEFVLSYTPSFRYGREIPEAASXXXXXXXXXXGRRTQAKDNDGVSVETDAKAAGSTAAKAARGAAEVGEGKAVAITSALRGGGVGLPMKLDGVAPAVGCGEASTASPPQDAVLVNIRPVGPVSLLLTPGYAHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQ----------CWYFDAGPGGLAIESSKTRHLATVPLPRSSFSPPAEGENAADKEDSLEVHVLQGYPIRALV 450
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BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT3_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.040e-19
Identity = 67/126 (53.17%), Postives = 77/126 (61.11%), Query Frame = 1 
Query:  394 MLGSPAMSPPPLSRRHGTAFDSAAQQAG--DG--------DAGGAAGAA-AWMETVAGCTGPEDGFVYGGEAGSVLTYVRKGREDGGDGGVAAAAGHPSLPQVLRWFWSLKHERGVLAYEVAELSE 738
            MLGS A +PPPLSRRH TAFDSAAQQAG  DG        DAGGAAG+A AW+ET   C+G  +      E  ++L  +                   S PQVLRWFWSL+HERGVLAY+VAELSE
Sbjct:    1 MLGSSANTPPPLSRRHRTAFDSAAQQAGRYDGGGDDATGHDAGGAAGSASAWIET---CSGVRE------ETAAMLMLLDT----------------LSCPQVLRWFWSLEHERGVLAYDVAELSE 101
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BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Uncharacterized (protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FP63_ASPOF)

HSP 1 Score: 60.1 bits (144), Expect = 5.890e-6
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 1 
Query: 1183 SPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQARGMKAASTLCWYFDAGPGGLAIESSKTRHLATVPLRHSSFTPPAEGENAADKEDTLEVHVLQGYPIRALV 1614
            S P + V +N+ P+    +LL P       QR    SL +A+  AE     P FRLG+NS G+ A++NHLHFQA           YF + P    +E + T  +           P  +GE+    E+ ++V  L  YP+R LV
Sbjct:  173 SDPPNVVAINVSPIEYGHVLLIPRVLECLPQRIDPDSLLLALHMAEEAG-SPYFRLGYNSLGAFATINHLHFQA-----------YFMSAP--FPVEKAPTERI-----------PVTKGES----ENGVKVSRLLNYPVRGLV 287
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BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Uncharacterized (protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MWE3_9MAGN)

HSP 1 Score: 60.1 bits (144), Expect = 5.940e-6
Identity = 44/138 (31.88%), Postives = 66/138 (47.83%), Query Frame = 1 
Query: 1201 VLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQARGMKAASTLCWYFDAGPGGLAIESSKTRHLATVPLRHSSFTPPAEGENAADKEDTLEVHVLQGYPIRALV 1614
            V +N+ P+    +LL P     + QR    SL++A+  A A   +P FRLG+NS G+ A++NHLHFQA           Y+ A P    IE + TR + T                    +D++++  L  YP+R LV
Sbjct:  180 VAINVSPIEYGHVLLIPRILEHYPQRIDRVSLSLALYMA-AEAGNPYFRLGYNSLGAFATINHLHFQA-----------YYLAVP--FPIEKASTRKITTA-------------------DDSVKISELSNYPVRGLV 284
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BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Uncharacterized (protein n=8 Tax=Paniceae TaxID=147428 RepID=A0A2T7DD07_9POAL)

HSP 1 Score: 59.7 bits (143), Expect = 7.030e-6
Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 1 
Query: 1165 GEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQARGMK 1416
            G   T S    A+L+N+ P+G   +LLTP       QR    S  +A+  A   R +P FR+G+NS G  A++NHLHFQA  +K
Sbjct:  158 GAPDTISASSSAILINVSPIGYCHVLLTPKIQDCLPQRIDEESFLIAMYIAREAR-NPFFRVGYNSLGGFATINHLHFQAYYLK 240
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BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QQN2_HETAK)

HSP 1 Score: 58.9 bits (141), Expect = 1.030e-5
Identity = 36/71 (50.70%), Postives = 40/71 (56.34%), Query Frame = 1 
Query: 1198 AVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRV---DPGFRLGFNSAGSSASVNHLHFQ 1401
            AV  N RP G +  LL P Y     Q A   +LAVA+ F  AL       G RLGFNS G+ ASVNHLHFQ
Sbjct:  279 AVYANARPFGRLCFLLLPFYGRDRPQVADGSALAVALHFMGALAARGGGGGVRLGFNSLGACASVNHLHFQ 349
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BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Uncharacterized (protein n=9 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6Q7Q1_SORBI)

HSP 1 Score: 58.2 bits (139), Expect = 2.090e-5
Identity = 33/80 (41.25%), Postives = 44/80 (55.00%), Query Frame = 1 
Query: 1165 GEASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQA 1404
            G   T S    A+L+N+ P+G    LLTP       QR    S  +A+  A   R +P FR+G+NS G  A++NHLHFQA
Sbjct:  153 GVPDTVSASSSAILINVSPIGYCHALLTPKIQDCLPQRIDQESFLIAMYVAREAR-NPFFRVGYNSLGGFATINHLHFQA 231
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Uncharacterized (protein n=9 Tax=Oryza TaxID=4527 RepID=A0A0E0JSB5_ORYPU)

HSP 1 Score: 57.8 bits (138), Expect = 2.230e-5
Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 1 
Query: 1168 EASTASPPQDAVLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQARGMK 1416
            +A  ASP   A+L+N+ P+G   +LL P       QR    S  +A+  A   R DP FR+G+NS G  A++NHLHFQA  +K
Sbjct:  100 DAVAASP--SAILINVSPIGYCHVLLIPRIQDCLPQRVDKESFLLAMYVAREAR-DPFFRVGYNSLGGFATINHLHFQAYYLK 179
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Match: Uncharacterized (protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BK08_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 2.970e-5
Identity = 53/161 (32.92%), Postives = 73/161 (45.34%), Query Frame = 1 
Query: 1201 VLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRLGFNSAGSSASVNHLHFQARGMKAASTLCWYFDAGPGGLAIESSKTRHLATVPLRHSSFTPPA----EGENAADKEDTLE-----------------VHV--LQGYPIRALV 1614
            VLVN+ P+    +LL P    +  Q  +  ++ +A+ FA  L   P FR+G+NS G+ A++NHLHFQ+          +Y    P  +  E +     ATVPL     TPP     EG  AA     L+                 VHV  LQGYP+ A V
Sbjct:  306 VLVNVSPIDYGHVLLVPRVLDNLPQALSTETVLLAMQFARELG-SPNFRVGYNSLGAYATINHLHFQS----------YYL---PMQMPCEIA-----ATVPLPGGLATPPVPGSGEGGAAAYATGALQISRKRALDLSIRRSAGSVHVSRLQGYPVNAFV 447
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig837.16502.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
Uncharacterized7.650e-29379.89protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.990e-23582.31protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.040e-1953.17protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.890e-632.64protein n=1 Tax=Asparagus officinalis TaxID=4686 R... [more]
Uncharacterized5.940e-631.88protein n=1 Tax=Kingdonia uniflora TaxID=39325 Rep... [more]
Uncharacterized7.030e-640.48protein n=8 Tax=Paniceae TaxID=147428 RepID=A0A2T7... [more]
Hypothetical1.030e-550.70protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized2.090e-541.25protein n=9 Tax=Andropogoneae TaxID=147429 RepID=A... [more]
Uncharacterized2.230e-542.17protein n=9 Tax=Oryza TaxID=4527 RepID=A0A0E0JSB5_... [more]
Uncharacterized2.970e-532.92protein n=1 Tax=Volvox africanus TaxID=51714 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig837contigE_fasciculatus_S2_contig837:363..5691 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score670.2
Seed ortholog evalue7.9e-190
Seed eggNOG ortholog2880.D7G939
Preferred nameGDPGP1
Model size1614
KEGG rclassRC00002
KEGG koko:K14190,ko:K15630
KEGG ReactionR07678
KEGG Pathwayko00053,ko01100,ko01110,map00053,map01100,map01110
KEGG ModuleM00114
Hectar predicted targeting categoryother localisation
GOsGO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006950,GO:0006952,GO:0006979,GO:0008150,GO:0008152,GO:0008194,GO:0008905,GO:0008928,GO:0009058,GO:0009108,GO:0009110,GO:0009266,GO:0009408,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009719,GO:0009725,GO:0009753,GO:0009987,GO:0010033,GO:0010035,GO:0010193,GO:0010471,GO:0010472,GO:0010473,GO:0010474,GO:0010475,GO:0016043,GO:0016051,GO:0016053,GO:0016740,GO:0016757,GO:0016758,GO:0016772,GO:0016779,GO:0019318,GO:0019752,GO:0019852,GO:0019853,GO:0033036,GO:0033037,GO:0033554,GO:0035251,GO:0042221,GO:0042364,GO:0042493,GO:0042545,GO:0042742,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045229,GO:0046364,GO:0046394,GO:0046527,GO:0046677,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0052386,GO:0052482,GO:0052542,GO:0052543,GO:0052544,GO:0052545,GO:0070568,GO:0070727,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0080046,GO:0080048,GO:0098542,GO:1901576,GO:1901700
Exons6
EggNOG free text desc.GDP-D-glucose phosphorylase activity
EggNOG OGsKOG2720@1,KOG2720@2759
Ec32 ortholog descriptionGDP-L-galactose/GDP-D-glucose phosphorylase
Ec32 orthologEc-15_001960.1
EC2.7.7.69,2.7.7.78
Cds size1614
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig837.16502.1prot_E_fasciculatus_S2_contig837.16502.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig837 363..5691 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842495.7622411-CDS-E_fasciculatus_S2_contig837:362..5451696842495.7622411-CDS-E_fasciculatus_S2_contig837:362..545Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig837 363..545 -
1696842495.78316-CDS-E_fasciculatus_S2_contig837:1036..12141696842495.78316-CDS-E_fasciculatus_S2_contig837:1036..1214Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig837 1037..1214 -
1696842495.7980359-CDS-E_fasciculatus_S2_contig837:1778..22001696842495.7980359-CDS-E_fasciculatus_S2_contig837:1778..2200Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig837 1779..2200 -
1696842495.809176-CDS-E_fasciculatus_S2_contig837:2800..28381696842495.809176-CDS-E_fasciculatus_S2_contig837:2800..2838Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig837 2801..2838 -
1696842495.822981-CDS-E_fasciculatus_S2_contig837:3617..40581696842495.822981-CDS-E_fasciculatus_S2_contig837:3617..4058Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig837 3618..4058 -
1696842495.8406432-CDS-E_fasciculatus_S2_contig837:5339..56911696842495.8406432-CDS-E_fasciculatus_S2_contig837:5339..5691Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig837 5340..5691 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig837.16502.1

>prot_E_fasciculatus_S2_contig837.16502.1 ID=prot_E_fasciculatus_S2_contig837.16502.1|Name=mRNA_E_fasciculatus_S2_contig837.16502.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=538bp
MIHHRRVAQPEGGFDKKSRASSPHHSPPRDAGASTSGFAGRTRTAESEHG
VPGSGGATAVDGYRPAPAAELAEGHCSAPSNELPGGTSGAGDGVHRQRYW
PKGRRLVGKTILATLAAGILTLLIASEGFTTMLGSPAMSPPPLSRRHGTA
FDSAAQQAGDGDAGGAAGAAAWMETVAGCTGPEDGFVYGGEAGSVLTYVR
KGREDGGDGGVAAAAGHPSLPQVLRWFWSLKHERGVLAYEVAELSERRDV
GEETGWEVVFASNIGRHKPFPPAGPAEVPWDPSAFNFYKASPLEFVLSYM
PSFRYERKTAAAASAAAAAAAGRRTQVEDNGVVSIETDAKAVGSTEAKAA
RGAAAVGESKAVTISASLRGGEVGLPIKLDGAEPAVGCGEASTASPPQDA
VLVNIRPVGPVSLLLTPGYPHSHNQRATAYSLAVAIDFAEALRVDPGFRL
GFNSAGSSASVNHLHFQARGMKAASTLCWYFDAGPGGLAIESSKTRHLAT
VPLRHSSFTPPAEGENAADKEDTLEVHVLQGYPIRALV
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mRNA from alignment at E_fasciculatus_S2_contig837:363..5691-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig837.16502.1 ID=mRNA_E_fasciculatus_S2_contig837.16502.1|Name=mRNA_E_fasciculatus_S2_contig837.16502.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5329bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig837:363..5691- (Ectocarpus fasciculatus EfasUO2)
ATGATTCACCATCGACGCGTCGCACAGCCGGAAGGGGGGTTCGACAAGAA
GTCAAGGGCCAGTTCGCCACACCATTCCCCCCCGAGAGATGCAGGCGCGA
GCACTTCTGGCTTCGCTGGGAGAACAAGAACCGCGGAAAGCGAGCATGGT
GTCCCCGGCAGCGGCGGTGCTACGGCTGTCGATGGCTATCGCCCCGCACC
TGCAGCCGAGCTGGCAGAGGGACACTGCTCAGCACCTTCCAACGAGCTTC
CAGGCGGCACGTCCGGAGCAGGCGATGGTGTACATCGACAACGGTATTGG
CCCAAGGGGAGGCGTCTGGTCGGGAAGACGATCCTAGCGACTCTGGCCGC
AGGTGAGAAACTCGAGCCCATTTCCCTGCGGGTTTTTTACTGCCGTTTCG
CTGATTACTTGCCGTGTGGCCGTGGTGGCTACAGAGTACCTCTCCCGGTT
CGGGACACCTCCTGGCTTGTCTCCGAGGCGGGTCTCGAGAACAGGGCATC
GTGGATGGAAAGCGCTAGCCCTGCCACCAAGTGTGGTATACATAGCCGCA
CTTGGTCCCGTTGTGATCGCAGCCGTGTCTGTTCAGGGTCTGCAAGAAAT
CGGGATGAGTGGTACGACTGCTGTAGTCTAATTTACATGGCCTACCGTGT
ACAGCAAGCACTACAGTACGTACGTGCGATGATACTATTTCCGACGGTAG
CAACTCCTTTAGACTACTTGCTGTGCTCTACTGCTGTCTACTCTCGCCAA
TATCCCTTGAGCGGCGCGCTGTTGTGCGTGTGACGTACCGTGGTGGGAAG
GAAGACTCCGTTGGGCAGCATGTCAGGATCAGGGAGGCCACCAAAGGTTC
ATGAACAGGCGACAACGGTCGTTGTGTGTCGCACGGCGATTTATATTGAT
TTGCTCCTTCTCCGGAACGAAGAGGCCACCCCCGGGACGGCAGGAGGCTG
TGTCTGCTACCCATACATCACGCTGCCTGTGATTGCTGCGAGTATGCATG
GGCCGGGTAAACACGGTGACAGAGCAAAGTCCCATTCGAGATATTACCAC
ATTTTGTATTCAACCACACTGACGTATTTCCATTTGTGGCCGATTTAGCG
TGGTCAATGGTACCTACAAGTGATAGGACACACACGTCTGCTGAGGGCCT
CCATCAAGGATCGTTTCGTGGTTTATTGGCTCACGAAATGCAGCGCAAAT
GGATTTGAGCGCTTTGCTCAGCTACGTGAGTCCGGCACACCACCACCAGT
TTTTTTTATCTCGAAGTACGCGTAAAGTGTTAGAATAGTACGGACATAAA
GAAGGTACTGGGTAGAGAGATCCGGATGGTTTTTTAATGTGAAGACAACA
ACAACAACGGGGCCGGGAAGAGGTATGCGTGAGGCACACCCCCTACTTTG
AGGAGAGTCGGCGTATGTAAAGGTTGACACAACGTCTGAGATATGGGTGC
AGGGTGTCATTCAAAGTTCAAGGCAAGGAGCACAAGAACGAGGGCGCCCT
CCTCCCGCCCCCCCCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CACAACCCCCGCCCCATCAATACTCGTCAAACCTCACGANNNNNNNNNCC
CCCCCCCCCCCCCTTCCCCCGGACCAACTGCAGGCATCTTGACGCTCTTG
ATAGCCAGTGAAGGTTTCACCACCATGCTCGGCTCGCCGGCCATGAGCCC
GCCGCCGCTCTCCCGCCGGCATGGAACGGCGTTCGATAGTGCTGCCCAAC
AGGCTGGCGACGGTGATGCCGGGGGCGCCGCGGGGGCGGCGGCATGGATG
GAGACCGTAGCGGGGTGCACGGGCCCTGAGGACGGGTTCGTCTACGGCGG
CGAGGCCGGCAGCGTGCTGACGTATGTGCGCAAGGGGAGAGAAGACGGTG
GCGACGGCGGCGTAGCTGCTGCTGCTGGACACCCTTCCCTGCCCCAGGTG
CTAAGGTGGTTCTGGAGCTTGAAGCACGAGCGAGGGGTGTTGGCGTACGA
AGTCGCCGAGCTGAGCGAGCGACGAGATGTCGGGGAGGAGACCGGATGGG
AAGTGGTGTTCGCGTCGAATATTGGTAAGCGACTTTTACGGCACTGGCTC
GCTCCTGTTTGGTAGGTTCGGTCGGGTTGGGTAGGCTCGGTCGGGTTGAC
TTGTCTTGGTGGACACGGCACTACTGTCATCCTTGTCTCCTCTCCTACAG
AAGGCGCGCCACCACTCATGAACCTCATCTTTTACCGAGGCTTGTTTGTT
TTTTCGCTATGGCGTACCTCAACATAGACTAGGCTTTAGTGAGGGCTTCT
CAATGAGCACCTGTTCATCTGCCAAGTTTGTAGTATCTGTTCTAGATCCT
GAAGATCTTAACCCCCAGGTTCTCAACTGGTGGCACGCTCTTTAAGTTAT
CTGGGGTGTTCGTCCTCTTGCGTTCGTTTTGTGTTTTTTTTACGTGAGTA
GTTTGTCTGGTCAAGCTTCCGTTGGTGGTGCCCTTCCTGTTTACACAGCT
GCTAGCATACAAATTCGCTGCTGTAATAGATGAGACGAGTGAAATCTTTC
CCCCTTCGGTCTTGGTCAGAGCCGGCGACAACGGTTTCGCCTTGACAATC
TCGCTTGTGACCGCAAGTCAGAAGACTTTGGGAATTCATAGGTGGAAGTA
AAATGCAATACGCGAAATCCTCCTCGTCATGGCTCTCATTGATTGCTGCA
AAAATGCGTACTCTCTGTACCCTCGCGCTTTTTTCGTAGCGGTGACACGC
GAACCTATATTAGCTATGCACCCTAATCCCTCCCAATGTTCCCATCGCGT
TGCCTCTCTCGACCTCTCCTCCGGCGGTGATGCTCGCCTACCGGATGGCG
TAGGGCGGCACAAGCCATTCCCGCCAGCTGGCCCCGCTGAGGTAAGGGCG
ACAGAGGACGGTACAGAATACCCTGCTTGCTTACGTTGCCCGCGACGTGA
ATGGGAACATGCCTCCTTTTTCTGCGTTAGTAGCGAGACTGAAAATGGGC
ACGGCTGTGGTGTTGGGAATGATGGGGGACACACGGAGAAAGGAAGAGAT
CAGCTACGACAGCCCTTTTGTAGATGTTCACCGTGTGCCGCTCGAACTTA
GCCGGCGTCTCTGTGTTGTATGCGCGTGACTCGCAAGTGTGTGCCTTAGG
TTCACACCGGCCTCACACACAGAGCGGACGGCGTCAAACAGGGACCGCAA
ACCGATGCCGCCGACCTAGCGCTTGAATATTGTGGTCGCTCGCCGAAGCT
ACTCGAATTTGCATCTTCTTGCGTATCTACTGCGCACATCATCTGCCGCG
AGAAATAATACAGCCCTGTACCCTACACCGGTATACCACAGTTGTCCCAA
GCACCCACACATCGACCATGTTTTAAACAACCAGTGTTATGAGTTGCGGG
GAGCAGAGTTTACAAGACTGGAAGTAGGTATAACTACAGACTTCATTTCA
TTGACCGGCAACCTTTTGTTACGCTACTTGTGACGTCACAGGTTCCCTGG
GACCCCTCCGCGTTCAACTTCTACAAGGCCAGCCCGTTGGAGTTCGTGCT
TTCCTACATGCCGAGCTTCCGGTACGAACGAAAAACAGCAGCGGCTGCTT
CTGCGGCCGCTGCCGCCGCTGCGGGGCGGAGAACACAGGTAGAAGACAAC
GGCGTGGTGTCCATCGAAACAGACGCAAAAGCGGTAGGGTCGACAGAAGC
GAAAGCTGCAAGAGGGGCAGCAGCGGTGGGGGAAAGCAAGGCGGTAACAA
TTTCCGCCTCCCTACGCGGCGGCGAGGTCGGTTTGCCGATAAAATTGGAT
GGCGCTGAGCCTGCGGTGGGGTGCGGGGAAGCTTCGACGGCGTCTCCTCC
GCAGGACGCGGTCTTGGTAAACATCCGGCCTGTCGGTCCCGTGAGCCTTC
TCTTGACGCCCGGGTAAGCTCTATGTACGAGAGTTGAGAACCGCGACAAA
CCGTGAGAGGTAGATGAAATGCACCCTTTGCTTCTCTTGTGTCCTCGCAC
GGAGGGGGACAGGAAAGGTTTGGTTGCGCCCATCCTCCTTCCGAAAAGCA
AGCACAAGAGTCCCCCGGCTACGGATTTCGCAACGATCCTGGAGTGTTGG
TTGCCACGCGCTGGACTTCCGGTGGGCAACTCGAAGATTTCGTGCCTGGT
TGTTCCTCCCAGCGTGGTGCTGATAGTCTGTTTCCTGCGTGCCGCAACGG
GTCGCGTTTTGTTCGCAACGGCAAATCAGACTCCAAGCGGGTTGTGGTTG
CCGAAGCAAGGAGCGTCGGGCGAACAAGGCGCGGCTGACGGTGTTGTGAG
GACAACGATCGTATATAGCCTTTGCACATATGGACATATATTCGTTGTTG
CGAACTTCGTGGTGAACTTGGAGCGCGGTCGACAGACAGACCGCTCGGAC
CCTCAATAATCTTGCTGAGACCTCCCGCACGCTGTGTTCCTTACAACGCA
ACTCATTTGTCTACCCGTCCACCGCAGGTACCCCCACTCGCACAACCAGC
GGGCGACCGCGTATTCTTTGGCAGTGGCCATAGACTTTGCCGAGGCGCTG
AGGGTGGACCCCGGGTTCCGACTCGGCTTCAACAGCGCGGGATCGTCGGC
CTCGGTCAACCACCTCCACTTTCAGGCACGTGGGATGAAGGCTGCGTCGA
CACTCGTGCGGTAGCGTGCGATGTGCGTGTGGATGGTGGCGGTTTTCCAT
GGAGACACGTCTAACTAGGGTATATCCCGCGAGGGAAAGCGACGTTGTTA
CCCGTCCTTACGAACCATCAATCTTTGTCCCGAGTTCGGCAACACAGCGC
TTAGACGTTGGTTTCGATGTTATTCAATTTTTTCGGCGGAATGACACAAT
CTAGTGCACAACAACAAGGCAGCAGTGCACGACAACAAGGCAGAATTATA
TTGTTCATGACAGTTTGCCCGTCTCTACATGTCAAGAGCTAAATCTCCTT
GTCACAGATGCGCTTGGCACATCTTTTCCCTCGCAGATATAACCTCTATC
TCAACCCGATGCGTCCACCTTCTGTATACAACCCCAGACGTCAGTCTGGC
GGGACGCAGAAACCTCTGACCGCTGCCGCGCGCCTTCTGTCCGTTCCCGT
CCCTGGCGCCCCCCCTCCCCCAACGTGCTGATTTTGTTGTCAAAAGTGCT
GGTACTTTGATGCTGGACCGGGTGGTCTTGCGATCGAGTCTTCCAAGACA
AGGCACCTTGCAACGGTACCTCTTCGACATTCCTCCTTCACCCCCCCCGC
GGAGGGCGAAAACGCGGCCGACAAGGAAGACACCCTTGAGGTTCACGTTC
TACAAGGGTACCCGATCAGAGCATTGGTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig837:363..5691-

>mRNA_E_fasciculatus_S2_contig837.16502.1 ID=mRNA_E_fasciculatus_S2_contig837.16502.1|Name=mRNA_E_fasciculatus_S2_contig837.16502.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1614bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig837:363..5691- (Ectocarpus fasciculatus EfasUO2)
ATGATTCACCATCGACGCGTCGCACAGCCGGAAGGGGGGTTCGACAAGAA
GTCAAGGGCCAGTTCGCCACACCATTCCCCCCCGAGAGATGCAGGCGCGA
GCACTTCTGGCTTCGCTGGGAGAACAAGAACCGCGGAAAGCGAGCATGGT
GTCCCCGGCAGCGGCGGTGCTACGGCTGTCGATGGCTATCGCCCCGCACC
TGCAGCCGAGCTGGCAGAGGGACACTGCTCAGCACCTTCCAACGAGCTTC
CAGGCGGCACGTCCGGAGCAGGCGATGGTGTACATCGACAACGGTATTGG
CCCAAGGGGAGGCGTCTGGTCGGGAAGACGATCCTAGCGACTCTGGCCGC
AGGCATCTTGACGCTCTTGATAGCCAGTGAAGGTTTCACCACCATGCTCG
GCTCGCCGGCCATGAGCCCGCCGCCGCTCTCCCGCCGGCATGGAACGGCG
TTCGATAGTGCTGCCCAACAGGCTGGCGACGGTGATGCCGGGGGCGCCGC
GGGGGCGGCGGCATGGATGGAGACCGTAGCGGGGTGCACGGGCCCTGAGG
ACGGGTTCGTCTACGGCGGCGAGGCCGGCAGCGTGCTGACGTATGTGCGC
AAGGGGAGAGAAGACGGTGGCGACGGCGGCGTAGCTGCTGCTGCTGGACA
CCCTTCCCTGCCCCAGGTGCTAAGGTGGTTCTGGAGCTTGAAGCACGAGC
GAGGGGTGTTGGCGTACGAAGTCGCCGAGCTGAGCGAGCGACGAGATGTC
GGGGAGGAGACCGGATGGGAAGTGGTGTTCGCGTCGAATATTGGGCGGCA
CAAGCCATTCCCGCCAGCTGGCCCCGCTGAGGTTCCCTGGGACCCCTCCG
CGTTCAACTTCTACAAGGCCAGCCCGTTGGAGTTCGTGCTTTCCTACATG
CCGAGCTTCCGGTACGAACGAAAAACAGCAGCGGCTGCTTCTGCGGCCGC
TGCCGCCGCTGCGGGGCGGAGAACACAGGTAGAAGACAACGGCGTGGTGT
CCATCGAAACAGACGCAAAAGCGGTAGGGTCGACAGAAGCGAAAGCTGCA
AGAGGGGCAGCAGCGGTGGGGGAAAGCAAGGCGGTAACAATTTCCGCCTC
CCTACGCGGCGGCGAGGTCGGTTTGCCGATAAAATTGGATGGCGCTGAGC
CTGCGGTGGGGTGCGGGGAAGCTTCGACGGCGTCTCCTCCGCAGGACGCG
GTCTTGGTAAACATCCGGCCTGTCGGTCCCGTGAGCCTTCTCTTGACGCC
CGGGTACCCCCACTCGCACAACCAGCGGGCGACCGCGTATTCTTTGGCAG
TGGCCATAGACTTTGCCGAGGCGCTGAGGGTGGACCCCGGGTTCCGACTC
GGCTTCAACAGCGCGGGATCGTCGGCCTCGGTCAACCACCTCCACTTTCA
GGCACGTGGGATGAAGGCTGCGTCGACACTCTGCTGGTACTTTGATGCTG
GACCGGGTGGTCTTGCGATCGAGTCTTCCAAGACAAGGCACCTTGCAACG
GTACCTCTTCGACATTCCTCCTTCACCCCCCCCGCGGAGGGCGAAAACGC
GGCCGACAAGGAAGACACCCTTGAGGTTCACGTTCTACAAGGGTACCCGA
TCAGAGCATTGGTG
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