mRNA_E_fasciculatus_S2_contig8252.16402.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8252.16402.1
Unique NamemRNA_E_fasciculatus_S2_contig8252.16402.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: PKD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M0_9PHAE)

HSP 1 Score: 483 bits (1244), Expect = 4.690e-165
Identity = 230/279 (82.44%), Postives = 249/279 (89.25%), Query Frame = 1
Query:  106 ATSDAITFRSSNDYPPVTGS-KWDNIAEPYRRTTFTASSTVGNPDVDVFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTNG 939
            ATSDAITF+ +N YPP T S KWD+IAEP+R TT TASSTVG+PD DVFQWSF DGTVLEGR V+ T  S+G H+V+L QIDV+TG V+RM SHVMVKYVRREIRQL DEDREAFFDAMETLYRLPT+EG A+YGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIES++GLT+YGES IFAADWFG+ASPDNSLHTVD GRWAYLP         ATD+VHNPYGLLRSPWNVDGTPFVTR+NLTNG
Sbjct:   87 ATSDAITFQCTNGYPPATTSTKWDHIAEPHRSTTLTASSTVGDPDADVFQWSFGDGTVLEGRTVEYTFTSVGLHDVALRQIDVSTGNVYRMSSHVMVKYVRREIRQLKDEDREAFFDAMETLYRLPTSEGNAVYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESAQGLTEYGESTIFAADWFGEASPDNSLHTVDKGRWAYLP--------GATDYVHNPYGLLRSPWNVDGTPFVTRFNLTNG 357          
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: PKD (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSP4_ECTSI)

HSP 1 Score: 430 bits (1106), Expect = 6.890e-144
Identity = 200/275 (72.73%), Postives = 230/275 (83.64%), Query Frame = 1
Query:  112 SDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
            ++ ++F SSN+Y P TGS W ++AEP+R TTFTASST+G PD DVF+WSFEDGTVLEGR VK   K+LG+  VSL QI V+TG  H     VMVKYVRREIR L+D+DREAFFDAMETLYRLPT EGR LYG+EYKGINFFVQMHL+GAGV DCDHWHDDAGIMTHHVGYTL FEQALQVVDP+V+IPYWEYTIE++ GL DY  S +FA+DWFG+ASPDN LHTVD GRWA+LPVM+     DA  +VHNPYGLLRSPWN D TP+VTR+N+TN
Sbjct:  105 TEGLSFVSSNEYLPTTGSPWTHLAEPFRDTTFTASSTLGRPDEDVFKWSFEDGTVLEGREVKHNFKTLGRQRVSLSQIVVSTGNTHETVGSVMVKYVRREIRSLTDKDREAFFDAMETLYRLPTVEGRELYGEEYKGINFFVQMHLNGAGVSDCDHWHDDAGIMTHHVGYTLLFEQALQVVDPAVTIPYWEYTIEAAAGLEDYDSSEVFASDWFGEASPDNELHTVDKGRWAFLPVME-----DAWHYVHNPYGLLRSPWNTDPTPYVTRHNVTN 374          
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: PKD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J9_ECTSI)

HSP 1 Score: 422 bits (1084), Expect = 7.910e-141
Identity = 199/277 (71.84%), Postives = 227/277 (81.95%), Query Frame = 1
Query:  106 ATSDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
            AT+D +   +SN YP +  S W N+AEP+R TT TA S+VG+PD DVF+WSFEDGTVLEGR V    K +G   VSL Q  V+TG + ++   VMVKYVRRE+RQL  EDREAF DAME LYRLPT EG ALYGD+YKGI+FFVQMHLDGAGV DCDHWHDDAGIMTHHVGYT+ FEQALQVVDPSV+IPYWEYTIE S+GLTDYGES IFA DWFGDASP+N++HTVDNGRWAYLPVMQ     DA D+VHNPYGLLR+PWN D TP+VTR+N+TN
Sbjct:   90 ATADDLWLDTSNAYPRLANSAWANLAEPFRDTTLTAGSSVGDPDRDVFKWSFEDGTVLEGREVTYMFKGVGAQTVSLAQTMVSTGRIVQIEDSVMVKYVRREVRQLKAEDREAFLDAMEKLYRLPTEEGVALYGDDYKGISFFVQMHLDGAGVSDCDHWHDDAGIMTHHVGYTMLFEQALQVVDPSVTIPYWEYTIEYSQGLTDYGESQIFAPDWFGDASPNNAMHTVDNGRWAYLPVMQ-----DAWDYVHNPYGLLRTPWNTDPTPYVTRHNMTN 361          
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: TYR (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ6_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 1.920e-128
Identity = 192/308 (62.34%), Postives = 221/308 (71.75%), Query Frame = 1
Query:  106 ATSDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIES---SEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTA----------------------------NDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
            AT++ +   +SN YP +  S W  +AEP+R TT TA S+VG+PD DVF+WSFEDGTVLEGR V    K +G   V L Q  V+TG + ++   VMVKYVRRE+RQL  EDREAF DAMETLYRLPT EG ALYGD+YK       MHLDGAGV DCDHWHDDAGIMTHHVGYT+ FEQALQVVDP+V+IPYWEYTIE    S+GLTDYGES IF  DWFGDASP+N++HTVDNGRWAYLPVMQAS A                             DA D+VHNPYGLLR+PWN D TP+VTR+N+TN
Sbjct:    7 ATANDLWLDTSNAYPRLANSAWAKLAEPFRETTLTAGSSVGDPDKDVFKWSFEDGTVLEGREVTYIFKGVGAQTVFLAQTIVSTGRIVQIEDTVMVKYVRREVRQLRAEDREAFLDAMETLYRLPTEEGVALYGDDYK-------MHLDGAGVSDCDHWHDDAGIMTHHVGYTMLFEQALQVVDPAVTIPYWEYTIECGCHSQGLTDYGESQIFDPDWFGDASPNNAMHTVDNGRWAYLPVMQASPAIAVLHCTLTGLIIYIHPTVDTIYRVAQDGDAWDYVHNPYGLLRTPWNTDPTPYVTRHNMTN 307          
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: TYR (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKB4_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 2.670e-115
Identity = 162/277 (58.48%), Postives = 210/277 (75.81%), Query Frame = 1
Query:  112 SDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSF--EDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
            +  ++  S+N YP ++ S W ++AEP+R +   A S VGNPD DVF W+   E+G   +GR ++ T    G+ ++ L Q   +TGE H + +H+MVKYVRREIR L + DR AFFDA+ETLYRLPT+EG   +G +YKGI++FVQ+HLDGAGVKDCDHWHDDAGIMTHHVG+TLQFEQA+Q+VDPSV+IPYWEY+IE+++ L  YG+S++F  DWFG+ SP+N  HT+  GRWA+L V +     DA D VHNPYGLLRSPWNVD TPFVTR+N T+
Sbjct:   89 TSVLSLTSTNGYPDISWSPWAHLAEPHRASVLRAESQVGNPDDDVFLWTLPNENGASFQGREIEYTFTEPGRKDIVLTQTVTSTGERHTLHTHIMVKYVRREIRTLHNSDRVAFFDALETLYRLPTSEGVQQFGSDYKGIDYFVQLHLDGAGVKDCDHWHDDAGIMTHHVGFTLQFEQAMQLVDPSVTIPYWEYSIEATDDLDSYGDSIVFDHDWFGEFSPNNDFHTMTKGRWAFLRVQR-----DAWDSVHNPYGLLRSPWNVDDTPFVTRHNTTS 360          
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Tyrosinase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K0_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 6.240e-115
Identity = 164/218 (75.23%), Postives = 188/218 (86.24%), Query Frame = 1
Query:  286 RVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTNG 939
            R VK   K++G+HEVSLMQI V+TGEV+ M S VMVKYVRREIRQL+D+DREAFFDAMETLYRLPT EG ALYG++YKGI FFVQMHLDGA VK+CDHWHDDAGI+THHVG+TL FEQALQVVDPSVSIPYWEYTIE++ GL +YGES +F   WFGDASPDNSLHTV +GRWA+L +M+     +A D+VHNPYGLLR+PWN DGTPFVTRY+  NG
Sbjct:    3 RRVKHKFKAVGRHEVSLMQIVVSTGEVYHMSSSVMVKYVRREIRQLTDKDREAFFDAMETLYRLPTGEGVALYGEDYKGIEFFVQMHLDGAAVKECDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIPYWEYTIEAALGLANYGESQVFHPGWFGDASPDNSLHTVTDGRWAFLSIMK-----EAWDYVHNPYGLLRAPWNTDGTPFVTRYDKING 215          
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Putative (scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 2.330e-113
Identity = 163/277 (58.84%), Postives = 208/277 (75.09%), Query Frame = 1
Query:  112 SDAITFRSSNDYPPVTGSKWDNIAEPYRRTTFTASSTVGNPDVDVFQWSF--EDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
            +  ++  ++N YP +  S W ++AEP+R T   A S VGNP+ DVF W+   E+G   EGR ++      G+ ++ L Q   +TGE + + +++MVKYVRREIR L++ DR AFFD +ETLYRLPT++G   +G +YKGI++FVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQA+Q+V+PSVSIPYWEYTIE++EGL  YGES +F  DWFG+ SP N LHTV  GRWA+LP+       DA D VHNPYGLLRSPWN++ TPFVTR+N T+
Sbjct:   89 TSVLSLTATNGYPDIVWSPWVHLAEPHRATVLRAESQVGNPNDDVFLWTIPNENGASFEGREIEYIFTDPGRKDIVLTQTVTSTGERYSLHTYIMVKYVRREIRALNNADRVAFFDTLETLYRLPTSQGVEEFGTDYKGIDYFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQAMQLVNPSVSIPYWEYTIEATEGLPSYGESTVFNDDWFGEFSPRNELHTVTKGRWAFLPIQP-----DAWDSVHNPYGLLRSPWNLNPTPFVTRHNATS 360          
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4W0_HETAK)

HSP 1 Score: 242 bits (617), Expect = 6.400e-73
Identity = 127/281 (45.20%), Postives = 169/281 (60.14%), Query Frame = 1
Query:  115 DAITFRSSNDYPPVT--GSKWDNIAEPYRRTTFTASSTVG--NPDVDVFQWSFEDGTVLEGR--VVKRTLKSLGQHEVSLMQIDVAT-GEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
            D ++F + N Y   T   S W ++AEPYR TTF A       + D+++  W   DG VL  +   +  T  S G   V++   +    GE    RS V+VKYVRREIR L+ +DRE   +AME +YRL   +G ALYG  ++ I  F   HLDGAG  +CDHWHDDAG+  HH G+T+QFE+ +Q++DP VS+PYWEYT+++ E L +   S IF  DWFG  SP N  H VD GRW +L +  ++   D    V N YGLLR+PWN D TP++TRY   N
Sbjct:   74 DGLSFATYNSYTKDTPIDSMWTHVAEPYRETTFRAKVPTEWLSADLEIV-WEI-DGQVLPDKDTTIVHTFTSTGPTSVAVTIANPERFGEKETYRSDVVVKYVRREIRSLTADDRERTLNAMEAIYRLSQTDGEALYGPNFRSIGSFQVQHLDGAGRMECDHWHDDAGLAAHHFGFTIQFEEVMQLIDPLVSLPYWEYTLDA-ENLDELEHSPIFRDDWFGKMSPTNEKHIVDTGRWKFLEIGYSA---DFDFDVQNAYGLLRAPWNTDSTPYLTRYKYVN 348          
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCA4_HETAK)

HSP 1 Score: 243 bits (620), Expect = 1.610e-71
Identity = 128/281 (45.55%), Postives = 169/281 (60.14%), Query Frame = 1
Query:  115 DAITFRSSNDYPPVT--GSKWDNIAEPYRRTTFTASSTVG--NPDVDVFQWSFEDGTVLEGR--VVKRTLKSLGQHEVSLMQIDVAT-GEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFVTRYNLTN 936
            D ++F + N Y   T   S W ++AEPYR TTF A       + D+++  W   DG VL  +   +  T  S G   V++   +    GE    RS V+VKYVRREIR L+ +DRE   +AME +YRL   +G ALYG  ++ I  F   HLDGAG  +CDHWHDDAG+  HH G+T+QFE+ +Q++DP VS+PYWEYT+++ E L +   S IF  DWFG  SP N  H VD GRW +L +  ++   D    V N YGLLR+PWN D TPF+TRY   N
Sbjct:   74 DGLSFATYNSYTKDTPIDSMWTHVAEPYRETTFRAKVPTEWLSADLEIV-WEI-DGQVLPDKDTTIVHTFTSTGPTSVAVTIANPERFGEKETYRSDVVVKYVRREIRSLTADDRERTLNAMEAIYRLSQTDGEALYGPNFRSIGSFQVQHLDGAGRMECDHWHDDAGLAAHHFGFTIQFEEVMQLIDPLVSLPYWEYTLDA-ENLDELEHSPIFRDDWFGKMSPTNEKHIVDTGRWKFLEIGYSA---DFDFDVQNAYGLLRAPWNTDSTPFLTRYKYVN 348          
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGQ1_9STRA)

HSP 1 Score: 236 bits (602), Expect = 3.580e-69
Identity = 126/284 (44.37%), Postives = 177/284 (62.32%), Query Frame = 1
Query:  109 TSDAITFRSSNDY-PPVTGSKWDNIAEPYRRTTFTASSTVGNPDVD-VFQWSFEDGTVLEGRVVKRTLKSLGQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMETLYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHVGYTLQFEQALQVVDPSVSIPYWEYTIES---SEGLTDYGESVIFAADWFGDASPDNSLHTVDNGRWAYLPVMQASTANDATDF--VHNPYGLLRSPWNVDGTPFVTRYNLTNG 939
            +++ + F  SN+Y   V G KWD+I EPYR TT TA   + + D +  + W   D TV   +V   T + +G + V++    +         S V  KYVRRE+R ++  DRE F D +  LY L T +G+A YG++YK I++FV+ HL GA   DCDHWHD+AGIMTHH+ +TL+ EQ LQ VDP++S+PYWEYT +S   ++G  D+  S +F  +WFG ASP ++ H V  GRWAY P+M     +DA+D+  + N YGLLRSPWN + T + TRY+   G
Sbjct:   76 SANELKFSVSNEYGQSVKGYKWDHIVEPYRLTTLTA--ILNDDDQEGTYIWVVGD-TVSSTKVAYYTFQDVGFNLVNVSWTSLDGETKLSASSQVACKYVRREMRAMTVSDRERFLDTLRLLYDLKTKDGQASYGEKYKDIHYFVKKHLHGAAALDCDHWHDNAGIMTHHLAFTLELEQTLQAVDPAISVPYWEYTKDSILHADG--DWESSEVFLDEWFGVASPTSNDHVVTEGRWAYAPIM-----SDASDYSNITNSYGLLRSPWNTNPTAYFTRYDKVLG 349          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8252.16402.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PKD4.690e-16582.44domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
PKD6.890e-14472.73domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
PKD7.910e-14171.84domain-containing protein n=1 Tax=Ectocarpus silic... [more]
TYR1.920e-12862.34protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
TYR2.670e-11558.48protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Tyrosinase6.240e-11575.23n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Putative2.330e-11358.84scytonemin-related tyrosinase n=1 Tax=Ectocarpus s... [more]
Hypothetical6.400e-7345.20protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical1.610e-7145.55protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical3.580e-6944.37protein n=2 Tax=Dictyocha speculum TaxID=35687 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8252contigE_fasciculatus_S2_contig8252:358..5822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score429.5
Seed ortholog evalue1.3e-117
Seed eggNOG ortholog2880.D7FSP4
Model size939
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Common central domain of tyrosinase
EggNOG OGs2D2AI@1,2SM4K@2759
Cds size924
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8252.16402.1prot_E_fasciculatus_S2_contig8252.16402.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8252 358..5807 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842485.696481-CDS-E_fasciculatus_S2_contig8252:357..4561696842485.696481-CDS-E_fasciculatus_S2_contig8252:357..456Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8252 358..456 -
1696842485.7095926-CDS-E_fasciculatus_S2_contig8252:1357..15001696842485.7095926-CDS-E_fasciculatus_S2_contig8252:1357..1500Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8252 1358..1500 -
1696842485.719116-CDS-E_fasciculatus_S2_contig8252:2092..21941696842485.719116-CDS-E_fasciculatus_S2_contig8252:2092..2194Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8252 2093..2194 -
1696842485.728259-CDS-E_fasciculatus_S2_contig8252:2622..26981696842485.728259-CDS-E_fasciculatus_S2_contig8252:2622..2698Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8252 2623..2698 -
1696842485.7374046-CDS-E_fasciculatus_S2_contig8252:3746..38691696842485.7374046-CDS-E_fasciculatus_S2_contig8252:3746..3869Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8252 3747..3869 -
1696842485.7480934-CDS-E_fasciculatus_S2_contig8252:5112..52211696842485.7480934-CDS-E_fasciculatus_S2_contig8252:5112..5221Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8252 5113..5221 -
1696842485.757806-CDS-E_fasciculatus_S2_contig8252:5535..58071696842485.757806-CDS-E_fasciculatus_S2_contig8252:5535..5807Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8252 5536..5807 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842485.7719216-UTR-E_fasciculatus_S2_contig8252:5807..58221696842485.7719216-UTR-E_fasciculatus_S2_contig8252:5807..5822Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8252 5808..5822 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8252.16402.1

>prot_E_fasciculatus_S2_contig8252.16402.1 ID=prot_E_fasciculatus_S2_contig8252.16402.1|Name=mRNA_E_fasciculatus_S2_contig8252.16402.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=308bp
MSTPSPRFVLDGRTAVRAPKKEEQQQQQQQATSDAITFRSSNDYPPVTGS
KWDNIAEPYRRTTFTASSTVGNPDVDVFQWSFEDGTVLEGRVVKRTLKSL
GQHEVSLMQIDVATGEVHRMRSHVMVKYVRREIRQLSDEDREAFFDAMET
LYRLPTAEGRALYGDEYKGINFFVQMHLDGAGVKDCDHWHDDAGIMTHHV
GYTLQFEQALQVVDPSVSIPYWEYTIESSEGLTDYGESVIFAADWFGDAS
PDNSLHTVDNGRWAYLPVMQASTANDATDFVHNPYGLLRSPWNVDGTPFV
TRYNLTNG
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mRNA from alignment at E_fasciculatus_S2_contig8252:358..5822-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8252.16402.1 ID=mRNA_E_fasciculatus_S2_contig8252.16402.1|Name=mRNA_E_fasciculatus_S2_contig8252.16402.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5465bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8252:358..5822- (Ectocarpus fasciculatus EfasUO2)
ACGGCACGCGTTTACATGAGTACACCTTCCCCCCGCTTCGTCCTTGATGG ACGGACAGCAGTAAGGGCACCGAAGAAGGAGGAGCAGCAGCAGCAGCAGC AGCAAGCCACCTCGGACGCGATAACCTTCCGGAGCTCGAACGACTACCCG CCCGTGACGGGCTCCAAGTGGGACAACATCGCGGAGCCCTACCGAAGGAC CACCTTCACGGCCAGCTCCACCGTGGGTAACCCCGACGTGGACGTGTTCC AGTGGTCGTTCGAGGACGGGACTGTGCTGGAGGGGAGGTACACATTATAT ATACATTTATTCGATTTTTTTTTTCAGGGGGGGGGGTGTGTTATATATTA TAAATTCATTTTTTTTTTGGGGGGGGGGTTCAGTTCTCACACCAGCATTT TTTATTTCTTCGGGTGGCAGAAGTGTAGTTTTCATTCCACATGAGCTCTT CTTGGCTGTCTCCCGTTGAATGTCTCCGTCTTCTTCTTTGAAGTCGAAAA AAATTTGTTTTGTTGTCGGGCATCTCTGCCTAGCTGAAACTACGTTTTTT TTTTGCTGCCCGTGTTTGGTCGTGTGTGTGTGTGTGTGTTTCGTTTTTCA GGGTAGTAAAGCGCACCTTAAAATCGCTCGGACAGCACGAGGTGTCCTTG ATGCAGATCGACGTCGCTACCGGAGAAGTGCACCGCATGAGGTCCCACGT CATGGTCAAGGTGCGATGATGATGATGATGATGAACCGAACCAGCCGCCT TGCTGCCTCGGTAGCAAACCGTGAATCCACCGCAGGGGGTAAGAGGGGGT GCTAGAGGTTTCAGATGTGTGAATAGGCGGGCACCGCAACCCGGGCGGTA TACACGCTTCCAGGCAGGCGCATGACACGCGCGTTGAAACACAAACAAGC GTAGATTTTGAACGCTGAGAAGTCCAGGTGCTTTCTCTACACGGCGAGGA GAGTCGTTTCGTGCAGACCCATCCTGCTGCAGCTGTGCGAAAGAGCGAAA CCGGCAAGGAGAGTCTATCACCGAAGGGGGTTTGAGAGGGGCAAGATGGA TAGATGAGAGGGGCATTGAAAAGTGGACATACAAGTAGCCTTCCTCTGAT GCTACGGATTCATTGCTCATCTATCTGAGACTTTTTTCTCTGGATAGAGA TGGGTTGTTCGTTGTGTCATATTCAGCAAGATAAAATAAAAAGTATTGGA CACAACATTCGTCTTCGCCGAAGAAACGCATCGAAAAGTACGCGACATGA CCACTCGGCGGTGTCGAAGACAGGGAGGAAATGGAAAAGACGAATCGAAA AAGACAAGACACTCGTCTTGTGCCGAACACACAGGAAGAGAGACGCATGG ACCCGCACCCCAAAAGACGCGATGCTCGTCTTCTGTCGGAACGCGGTCTT GTAGGTCGCGGGTGGACAAGGAGCGGCGAGTTTCTCGGAGAAGAAAGAAA GTAGTTAAATAGTCCTGGTGTCTATTACTAAAGCACAGTTAGCTCCACCA ATCAAACCTGACAGTTTTTCGAAGCCAAACAACGACAGTAGTTCTTCACA GAGTATAGCGGGGTTCGAGGAAGCATGGAGTGTTGAGTCACTTGTGCACA CTGGTTTGGAACTGTGCTCCCAATGTTGAAGAGAGCAGGAAGGCGGAGGA AACCGCCCGTCGAATCGATCGAACCGGAAACCCATTCAGCCGCCGGAGAC ACGCCATCCATGCACCTTGCTCTTCAAGTAGGGAAGGACTTCACAGTTGA TGGACAAGCGCGAGGGACAGTTTATAACGAGGAATAGAAGACGAGCAAAT ACATGAAGTAGATGACGAGAAGGTCGACGACGCTTGTTCACCCAGTGCTC TGAAGAAAAAGCATATTGCATGCACGGTCACCAAAAACAACGAGAAGCCA AGCTGGTTGCGTTTTGCATTTTTTCGCGCTTTTAATCTTTTGTTTTTTGG CAGTACGTGCGGAGGGAGATTCGTCAGCTGTCGGATGAGGACAGGGAGGC GTTTTTCGACGCCATGGAGACGCTCTACCGCCTCCCCACCGCCGAGGGCA GAGCCTTATACGGCGACGAGTACAAGGTGCGCCCCCCCCCCCCCTCTCCT TCGCCCCCTGGACCGCGGGAACTTTCCCGTCATCGCCGGTCGCACTTTCC CGTCCCGTTTTCGTGTCCTTCCTTGCTAGGCTTGGTCTCCGTCGGTGATT GCCTGGCTTTCTTCTGTCGGGTTGGCGTGTCATACTGACATACGTGTCAA CAAAAAATGGTGTATCTGAATCGATGTAATCGCCGACGGAACTCAAGCCT GTTCCGTTCCATATAGATCCGTTCCGTGTAAAGAAACCCCACCGCCGCGG GCGGCACGCGGAAGAACGGCGACAAGACCCCAAGCCGCGCCGTTACCCCC ACTGTTGTGGGAGAGGTCGCGCTGTGATGCAATCGTGGGTCGAAACGGTC GCGTTGCTACCCCCCCGCGCTGTGGAAAAGTCATGTCACCGCGAGCCGAA AAGGTTGATCTGTCGTTCCTATCAATTTTGCCGCTACAGCCGTATCTACC TACCTCGCACTCCTAGATTGACGTCGTGCACAACAGCCGCGGTAAGATGT GGTGTCACGGTTTGAAATTTTACTAGCTACGGATGTTGTGTACGTTTTTC GTTGTCAAGTTGAGCGATGAAACAACGCCACGGAACACCTCGAACGCGCG AGCTCCGTCGTTTTGGTTTCCAGAGTACAATTTTCGTTTTTACCTTTGAG TTTCGTCGTCGGCCGGCCACCCCACGTCCGAGTCGCCAGCCACCCATGCT CTCAATCCCGGAGCGCATGTTCCCGCCGTTTCTCCCGAGGAGATACCTTG CCCTCTTTCCTGGCGATCGCTGCTCCTTGACCCACTGATCGAACTGTCGA ACCCACCGATTTTACCTTCAATACCACAAGGATCATTGTTGGATAATCGT GTGGTGTCGTGTATTTCCTTCGTGCTGATCTTCCATTGAAAAATTCCGCA CATCTATCTCCAGTCAAGGGGGGGGAGGGGGCTGATTTTTTGTGCGATGG CCGAGGATATCAATCAACGCCGCCCCGCTCTAACTCTCTCTTCCCTCCTC TGTGGCTTCCAACTTATACCGCAGGGCATCAACTTTTTCGTGCAGATGCA CCTGGACGGGGCCGGCGTTAAGGACTGCGACCACTGGCACGACGACGCCG GTGCGCAATAGATTAAAAGAGACCGTAGGTTTAGGAAGATCCACGTTCGC TCATGGACCTGTATTTTCCCATCTGTCTTGTGTGAAACGCCGGCAACATC CCTGTTGTTTTCAGTCTCGCTATTCCCGTACACACTTGGTGCCGGTAGGC GAAGGACCACTTTGGACTAAATGAGTCCGGGGTGGGAAATTCGTCCAGCA CCTGTATGGCGGCTGTATGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGTT TTTGGGGGTGGGGGGAATAGCTCGGTCCGCCTTTTTTTTTTTTTTTCCCC CCTTTTTTTCCCACCCCCCNNNNNNNNNNGCGGTGTGAGGGGAGCATTGG AAGTGGAGGGTATAACCCGCTGCGCCTGACGTTGCTGTTTGACCCCCCTG CTTTGCCACACGCGAACCCTTTTGGCAGGCATCATGACGCACCACGTGGG GTACACGTTGCAGTTCGAGCAGGCTCTGCAGGTGGTGGATCCCTCGGTCT CCATCCCCTACTGGGAGTACACCATCGAATGTACGTTGTTTTCATAAAAC GTAAAATCATGATCATACCCGGCGGAACCGTTTCGTTTTTGTCGTCGAAT GCTTTCGTTTGAAGGCTTATCACCACTCAGTCTAATCTTTCCGGAGGAAC ATGATGACGTACGTCCGATTCCCCACGCATCCCGCGATGATGATATATGG GTTTGCTACTTTCCCCTTTCGCCGTGGTTGTTGGCTTGGACACGCTGTAC GAAGACGCCTTGTTTTTCTCTTCTGCCGTTTGCACGATGCGAGTTTTGTA CGCGCCTGCTGCTAGTAGTAAAATTTGGTAGGCCACACTCGCACAACGGC GGGGTAGGATACGTTTGCTGATGAATTCAGGGCGGGGGGGGGGGGGGGGG GCACCCGGGAGCTCTCGCTGCTCGTGCCGCTCGTTAAAACCGCCGCGCTT GCTATTATTCTATAGGAGGAACACCCCCCTTCATATCTTGTCCACCGTCA CCTGACACAGTGTGTGGTTCTCTCAATACGATGGTTGTTGTTGCTGTTGT TGCTGGCTTAACTCAACGTCCTCTTTCGTGCGGTGTTGCTGTGCTGGGTG GGGGGGGGGGGTTGCATTGCAGCCTCGGAAGGACTGACGGACTACGGGGA GTCGGTGATCTTCGCGGCCGACTGGTTCGGCGACGCCTCCCCCGACAACT CGCTGCACACCGTCGACAACGGCCGGTGGGCGTACCTCCCAGTGATGCAG GCGAGTACCGCTAACGTACCAGTAGTCCAGCGCGGTTCTTTTTTTACGTG AGGAAACATGCAGGATAAAGTATGGAATCGGCCAGGTTATGGGTAGTGGT AGGGTCTGCGTGCCTCTTCTCCGTAATCAACTCACTCTTGTTCGCGTAGG GGGACCTTTTTTACATATGGAGACCGCGCGCGGCCTTGACAAATAAAAAA AAGGCGTGTTAGCTGGCACCACAACCGACCGCGTTGCTTGCCTTAGCCTT TTCGTCTTGCACCCCCGAGACTGCTGTGCTTGCCAAGCCAACCAAGTGCT CGCCGCCTCCCACAAAGATGTCGCCGACCTCGAAAGAGGAGAGGATACAA GGACCGAGTCGCACTCTGTGGTGCCAATTCTGTTCGGGAATACAAGGACC GTTTGAGATGTTTTGAGATGCAGTACTCCCGTCTCAGCGTCCCTTTATTT TGAAACATATTTGTTTAAGAACGCCCGTCGTTGGCAGCGGCCTCCCTCTC GAACCAGGCCGCGTCTTGGTCGTCGACGTTTTTTTTTTCTTTTTTTGTAT TGTTGGCGAGAGGTTTGATGCCAGAAAGTTAGCAGCAGCGCAGGGTCATG AGAGGAGTCCGGGGCGGGGTGGTAAATATTTTGTGAAGGGTGATTTTTTT TTTCGGTTTTGGAGGAGTCAGGGGCGGGTTGTTGGTATCGGTGGAATGTT AAGTAAGTTCGTGGTCGATATTCGTGGAAGGCTACACGGTTCCATCTCTG TGCTTCTTTGTTTTCATACATACCCGTTGTAAGCGTATTCCTTCCCCGAT TCGTTAGCATGTACTTGGCAAGTGGGTGCTAACCTGCTGATCTGTCGCTT GCCGCCTTCTTTTGTTTTGTCGGACTTGGGGGGGGGGGGGTGATTTTTCG GGGCTGCTTGCTGCAGGACGCGACCGACTTCGTCCACAACCCTTACGGCC TTCTGCGGTCCCCCTGGAACGTCGACGGGACCCCCTTCGTCACCCGCTAC AACTTGACCAACGGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8252:358..5822-

>mRNA_E_fasciculatus_S2_contig8252.16402.1 ID=mRNA_E_fasciculatus_S2_contig8252.16402.1|Name=mRNA_E_fasciculatus_S2_contig8252.16402.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=924bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8252:358..5822- (Ectocarpus fasciculatus EfasUO2)
ATGAGTACACCTTCCCCCCGCTTCGTCCTTGATGGACGGACAGCAGTAAG
GGCACCGAAGAAGGAGGAGCAGCAGCAGCAGCAGCAGCAAGCCACCTCGG
ACGCGATAACCTTCCGGAGCTCGAACGACTACCCGCCCGTGACGGGCTCC
AAGTGGGACAACATCGCGGAGCCCTACCGAAGGACCACCTTCACGGCCAG
CTCCACCGTGGGTAACCCCGACGTGGACGTGTTCCAGTGGTCGTTCGAGG
ACGGGACTGTGCTGGAGGGGAGGGTAGTAAAGCGCACCTTAAAATCGCTC
GGACAGCACGAGGTGTCCTTGATGCAGATCGACGTCGCTACCGGAGAAGT
GCACCGCATGAGGTCCCACGTCATGGTCAAGTACGTGCGGAGGGAGATTC
GTCAGCTGTCGGATGAGGACAGGGAGGCGTTTTTCGACGCCATGGAGACG
CTCTACCGCCTCCCCACCGCCGAGGGCAGAGCCTTATACGGCGACGAGTA
CAAGGGCATCAACTTTTTCGTGCAGATGCACCTGGACGGGGCCGGCGTTA
AGGACTGCGACCACTGGCACGACGACGCCGGCATCATGACGCACCACGTG
GGGTACACGTTGCAGTTCGAGCAGGCTCTGCAGGTGGTGGATCCCTCGGT
CTCCATCCCCTACTGGGAGTACACCATCGAATCCTCGGAAGGACTGACGG
ACTACGGGGAGTCGGTGATCTTCGCGGCCGACTGGTTCGGCGACGCCTCC
CCCGACAACTCGCTGCACACCGTCGACAACGGCCGGTGGGCGTACCTCCC
AGTGATGCAGGCGAGTACCGCTAACGACGCGACCGACTTCGTCCACAACC
CTTACGGCCTTCTGCGGTCCCCCTGGAACGTCGACGGGACCCCCTTCGTC
ACCCGCTACAACTTGACCAACGGC
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