mRNA_E_fasciculatus_S2_contig8169.16323.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Z3_9PHAE) HSP 1 Score: 169 bits (427), Expect = 4.380e-47 Identity = 79/84 (94.05%), Postives = 81/84 (96.43%), Query Frame = 1
Query: 4 EPGMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTAERPRYSLVLKLIFFSKKHGR 255
EPGMPLF TLLIYLDADWRREWDAETLFLDPPTGTGVFVRPR GRAIVMDQD+THRISTPSQTA RPRYSLVLKLIFFSK+HGR
Sbjct: 518 EPGMPLFATLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRAGRAIVMDQDVTHRISTPSQTANRPRYSLVLKLIFFSKQHGR 601
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: SET (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV9_ECTSI) HSP 1 Score: 167 bits (423), Expect = 1.380e-46 Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 1
Query: 1 REPGMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTAERPRYSLVLKLIFFSKKHGR 255
REPGMPLF TLLIYLDADWRREWDAETLFLDPPTGTGVFVRPR GR IVMDQD+THRISTPSQ A+RPRYSLVLKLIFFSK+HGR
Sbjct: 396 REPGMPLFATLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRAGRVIVMDQDVTHRISTPSQMAKRPRYSLVLKLIFFSKQHGR 480
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGZ3_HEMAN) HSP 1 Score: 119 bits (297), Expect = 4.560e-32 Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 1
Query: 1 REPGMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTA-ERPRYSLVLKLIFFSKKHG 252
REP PLF T L+YLD++W EWDAETLFLDP T TGVFVRP+ GR ++MDQD+THR+S PS A +RPRYSLV KL+ K H
Sbjct: 79 REPYKPLFVTALLYLDSEWPNEWDAETLFLDPETQTGVFVRPKAGRLVLMDQDVTHRVSAPSPLAGKRPRYSLVWKLVLHPKTHA 163
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E9G6_9EUKA) HSP 1 Score: 114 bits (285), Expect = 6.590e-31 Identity = 51/75 (68.00%), Postives = 61/75 (81.33%), Query Frame = 1
Query: 10 GMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTAERPRYSLVLKLIF 234
G PLF +LLIYLD WRREWDAETLFL+P +G G+ V+PR GRA++M QD+ HR+STPS A RPRYSLV KL+F
Sbjct: 6 GRPLFVSLLIYLDETWRREWDAETLFLEPSSGAGLLVQPRPGRAVLMHQDVLHRVSTPSMLARRPRYSLVWKLLF 80
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AK99_9EUKA) HSP 1 Score: 113 bits (283), Expect = 5.360e-30 Identity = 49/75 (65.33%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 10 GMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTAERPRYSLVLKLIF 234
G PLF +L++YLD +WRREWDAETLF++P +G G+ V+PR GRA++M QD+ HR+STPS A RPRYSLV KLIF
Sbjct: 58 GKPLFVSLIVYLDEEWRREWDAETLFIEPESGAGLLVQPRPGRAVLMHQDVLHRVSTPSLIARRPRYSLVWKLIF 132
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BQ14_CHRCT) HSP 1 Score: 113 bits (283), Expect = 1.810e-29 Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 10 GMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTAERPRYSLVLKLIFFSKK 246
G PLF +L++YLDA WR +WDAETLFLD +GTGVFV+PR GRA++M QD HR+S PS A RPRYSLV KL+F K+
Sbjct: 118 GKPLFVSLIVYLDAQWRPQWDAETLFLDAESGTGVFVQPRPGRAVLMHQDALHRVSAPSALAHRPRYSLVWKLLFVPKR 196
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: Uncharacterized (protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PLQ3_9CHLO) HSP 1 Score: 117 bits (294), Expect = 3.140e-29 Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 1
Query: 1 REPGMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTAERPRYSLVLKLIFFSKKHG 252
REPG PLF T+L YL+ +W EW AETLF DP TGTGVFV+PR GR ++MDQD+ HRIS+P++ AE PRYSLV KL+ + ++ G
Sbjct: 355 REPGRPLFVTVLAYLNEEWPEEWHAETLFADPETGTGVFVQPRPGRVVIMDQDMPHRISSPARDAEGPRYSLVWKLLLWPRQRG 438
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: Uncharacterized (protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GK00_GONPE) HSP 1 Score: 115 bits (287), Expect = 5.890e-28 Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 1 REPGMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTAE-RPRYSLVLKLIFFSKKHG 252
REPG PLF +LL+YL+A W REWDAETLFLD P+ GV VRP+ RA+++DQDI HR+STPS TA RPRYSLV KL+F ++ G
Sbjct: 276 REPGRPLFVSLLLYLNARWDREWDAETLFLDTPSDCGVLVRPKPYRAVLLDQDILHRLSTPSLTAAGRPRYSLVWKLVFLPRRPG 360
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: Uncharacterized (protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QHE4_9CHLO) HSP 1 Score: 108 bits (269), Expect = 1.290e-27 Identity = 52/84 (61.90%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 1 REPGMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTAERPRYSLVLKLIFFSKKHG 252
REPG PL +LL+YLD DW E DAETLFLD + TGV VRPR RA++MDQD+ HR+S PS A RPRYSLV KL+ K+ G
Sbjct: 36 REPGKPLLFSLLLYLDGDWPLEHDAETLFLDSVSDTGVVVRPRRFRAVLMDQDVVHRLSAPSHAAGRPRYSLVWKLVMLPKQPG 119
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Match: Hypothetical (protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X7J3_EMIHU) HSP 1 Score: 105 bits (262), Expect = 4.220e-27 Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 10 GMPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDITHRISTPSQTAERPRYSLVLKLIFFSKK 246
G PL +LL+Y+D +WRREWDAETLFLD G GV V+PR GR ++M QD+ HR+S PS A RPRYSLVL+L K+
Sbjct: 59 GRPLLVSLLVYVDDEWRREWDAETLFLDDERGVGVLVQPRPGRCVLMHQDVLHRVSAPSLAARRPRYSLVLRLCLVPKE 137 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8169.16323.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8169.16323.1 >prot_E_fasciculatus_S2_contig8169.16323.1 ID=prot_E_fasciculatus_S2_contig8169.16323.1|Name=mRNA_E_fasciculatus_S2_contig8169.16323.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=81bp MPLFTTLLIYLDADWRREWDAETLFLDPPTGTGVFVRPRGGRAIVMDQDIback to top mRNA from alignment at E_fasciculatus_S2_contig8169:5047..6109- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8169.16323.1 ID=mRNA_E_fasciculatus_S2_contig8169.16323.1|Name=mRNA_E_fasciculatus_S2_contig8169.16323.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1063bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8169:5047..6109- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8169:5047..6109- >mRNA_E_fasciculatus_S2_contig8169.16323.1 ID=mRNA_E_fasciculatus_S2_contig8169.16323.1|Name=mRNA_E_fasciculatus_S2_contig8169.16323.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=243bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8169:5047..6109- (Ectocarpus fasciculatus EfasUO2)back to top |