mRNA_E_fasciculatus_S2_contig8143.16298.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: DDE (Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG7_9PHAE) HSP 1 Score: 470 bits (1209), Expect = 7.580e-162 Identity = 228/248 (91.94%), Postives = 238/248 (95.97%), Query Frame = 1
Query: 1 RGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQPVNSRRLFANGACILGDSAFAESPWMRTPIGKPNSRAERFFNYKHSSMRSRLEHAFGRLKKKFRALLNGLDCHLEHCPTIVNACVIVHNFIFMREGESPADHGVDNAPTRNGTGRALSQGAGPHGSERAREVDYLRRSFLQREWGAPGSRMDQARKRDERQMRMNNSTAR 744
RGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVL DTAFYEMVQEDQAQPV+SR+LFANGACILGDSAFAESPWMRTPIGKP++RAERFFNYKHSSMR R+EHAFGRLKKKFRALLNGLDCHL+HCPTIVNACVI+HNFIFM EGESPADHGVDNAPTRNGTGRALSQGAGP SERAREVDYLRR+FLQREWGA GSRMDQAR +DER+ R NN TAR
Sbjct: 86 RGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLTDTAFYEMVQEDQAQPVSSRQLFANGACILGDSAFAESPWMRTPIGKPDNRAERFFNYKHSSMRFRVEHAFGRLKKKFRALLNGLDCHLDHCPTIVNACVILHNFIFMCEGESPADHGVDNAPTRNGTGRALSQGAGPFDSERAREVDYLRRNFLQREWGAAGSRMDQARLQDERRARRNNGTAR 333
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: DDE (Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA50_9PHAE) HSP 1 Score: 196 bits (497), Expect = 7.950e-56 Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 1
Query: 1 RGVIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQPVNSRRLFANGACILGDSAFAESPWMRTPIGKPNSRAERFFNYKHSSMRSRLEHAFG 405
R V+G IDGSHIKI AP + Q +YYNYK FYSI LLAIVDN G+FRW CSG G+C DSGVL T FY+ Q +Q++PV+ RR+FANGACILGDSAFAE PWMRTP P+SR +R+FN+ HSSMR R+EHA G
Sbjct: 113 RKVVGGIDGSHIKIPAPTEHQQLAYYNYKKFYSIILLAIVDNRGLFRWTCSGCAGSCGDSGVLQHTKFYKAAQREQSKPVDERRIFANGACILGDSAFAEGPWMRTPYTMPSSREQRYFNFMHSSMRMRVEHALG 247
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: DDE (Tnp4 domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UNG9_AMPQE) HSP 1 Score: 116 bits (291), Expect = 2.670e-26 Identity = 68/168 (40.48%), Postives = 101/168 (60.12%), Query Frame = 1
Query: 10 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQPVNSRRLFANGA--CILGDSAFAESPWMRTP-IGKPNSRAE-RFFNYKHSSMRSRLEHAFGRLKKKFRALLNGLDCHLEHCPTIVNACVIVHN 501
IGAIDGSHI I+ P + YYN K FYSI + +VD+ G F G PG C D+ V +++ Y+ + P +R+L + ILGD+A+ W+ P I P+S + + +NY+ S R +E++FGRLK ++R LL LDCHL++ P+IV+AC+ +HN
Sbjct: 20 IGAIDGSHIPIIKPCHC-PSDYYNRKGFYSIIVQGLVDHTGKFLDAYIGWPGKCHDARVFQNSSLYKKGIKGSLLPCLTRKLGSVDVPLVILGDAAYPLLSWLMKPYIETPSSPDDIKLYNYRQSRARMVVENSFGRLKGRWRILLKRLDCHLDNVPSIVSACITLHN 186
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: DDE (Tnp4 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NY25_STRPU) HSP 1 Score: 112 bits (280), Expect = 2.470e-24 Identity = 69/192 (35.94%), Postives = 105/192 (54.69%), Query Frame = 1
Query: 10 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQPVNSRRLFANGACI----LGDSAFAESPWMRTPIGKPN-SRAERFFNYKHSSMRSRLEHAFGRLKKKFRALLNGLDCHLEHCPTIVNACVIVHNFIFMRE----------GESPADH 540
+GA DG H+ I AP S ++Y+NYK ++SI +LA+VD++ F + G+ G+C+D+G+ D+ FY +++E A L + I +GD AFA WM P N ++ ER FNY+ S R +E++FG L +FR LL + + TIV AC +HN + R+ GE+ ADH
Sbjct: 60 LGAFDGKHVAIRAPSHS-GSAYHNYKGYFSIVMLAVVDSQYNFMYLDVGSNGSCSDAGIFKDSEFYSVLEEGAAALPPPEPLPDDDHSIPYFFVGDDAFALKDWMMKPYATRNMTKPERLFNYRLSRARRIVENSFGILAHRFRCLLTTMLQKPGNVETIVLACCCLHNLLAARKPQKITRRADRGETDADH 250
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: DDE (Tnp4 domain-containing protein n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4AJL1_9GOBI) HSP 1 Score: 111 bits (277), Expect = 9.140e-24 Identity = 69/186 (37.10%), Postives = 100/186 (53.76%), Query Frame = 1
Query: 7 VIGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQPVNSRRL--FANGACILGDSAFAESPWMRTP--IGKPNSRAERFFNYKHSSMRSRLEHAFGRLKKKFRALLNGLDCHLEHCPTIVNACVIVHNFIFMREGESPADHGVDN 552
V GAIDG+HI I+AP + YYN KHFYS+ L A+VD+ F G PG D+ VL +++ Y + P RL ILGD+A+ PW+ P +G+ + A+ FN++ S R +E AFGRLK ++R LL D H+ I++AC I+HN+ + E + VD+
Sbjct: 87 VAGAIDGTHIGIIAPAED-PADYYNRKHFYSVILQAVVDHRMQFWDINVGWPGKVHDARVLANSSLYRRGENGTLFPGWIERLNNVDVPVHILGDAAYPLLPWLLKPYPVGRGLTEAQTHFNFRLSQGRMTVERAFGRLKGRWRCLLKRCDVHISFVNQIISACCILHNYCEIANEEWEDEDIVDD 271
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: protein (ALP1-like n=2 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI0015694C3C) HSP 1 Score: 112 bits (280), Expect = 1.700e-23 Identity = 74/223 (33.18%), Postives = 115/223 (51.57%), Query Frame = 1
Query: 10 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQPVNSRRLFANGA-------CILGDSAFAESPWMRTPIG-KPNSRAERFFNYKHSSMRSRLEHAFGRLKKKFRALLNGLDCHLEHCPTIVNACVIVHNFIFMREGESPADHGVDNAPTRNGTGRALSQGAGPHGSERA-REVDYLRRSF 651
+GA+DG H++++ PP+S + YYNYKHF+S+ L+A+ D F W GA G +DSGV +T+ ++ + E+ R + N + I+ D AFA + + P G K S+ + FNY+ S R +E FG + K+R L +D ++ IV A ++HN + MR+G + D ++ AP N P S RA EVD +R F
Sbjct: 166 VGALDGKHVRLIQPPES-GSMYYNYKHFFSLVLMALCDANYCFIWIDVGAYGKDSDSGVFKETSLFKKLSENSLNLPEPRSITNNESDAFKLPYVIVADEAFAMTKNLMRPYGGKMLSKEKNIFNYRLSLARRYVECTFGIMCNKWRILHRPIDVKIDFAVDIVKAICVLHNLVRMRDGINQDDM-INPAPLPN---------VNPTNSGRAIHEVDNIRTKF 377
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: putative (nuclease HARBI1 n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=UPI0007B9D867) HSP 1 Score: 110 bits (275), Expect = 1.920e-23 Identity = 65/171 (38.01%), Postives = 101/171 (59.06%), Query Frame = 1
Query: 10 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQE-----DQAQPVNSRRLFANGACILGDSAFAESPWMRTPIGKPN--SRAERFFNYKHSSMRSRLEHAFGRLKKKFRALLNGLDCHLEHCPTIVNACVIVHN 501
+GAIDGSHI ILAP + T Y+N K +YSI L A+VD +G+F +G PG+ D+ VL +A +E+ + Q + +N + + G ILGD+A+ + W+ P + ++ +N+K S R +E+AFGRLK ++R LL DC+LE ++V C ++HN
Sbjct: 87 VGAIDGSHIPILAPQE-YHTEYFNRKRWYSIVLQAVVDAKGLFWNVFAGLPGSLHDARVLRLSALWELAERRHLFAQQYRNINGQDV---GFYILGDAAYPLTSWLMKPFPDNGFLTAQQQVYNHKTSKARVVVENAFGRLKGRWRCLLKRNDCNLERVKSMVLTCCVLHN 253
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: uncharacterized (protein LOC119384138 n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI00189627A2) HSP 1 Score: 112 bits (280), Expect = 2.160e-23 Identity = 58/166 (34.94%), Postives = 96/166 (57.83%), Query Frame = 1
Query: 10 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQ-PVNSRRLFANGACILGDSAFAESPWMRTPIGKPN-SRAERFFNYKHSSMRSRLEHAFGRLKKKFRALLNGLDCHLEHCPTIVNACVIVHN 501
+GA+DG H + +PP + YYNYK +YS+ LLA+VD+ MFR+ G+PG C D+ V ++ +++ + P + A +L D AF +P + P + S ++ FNY+ S R +E+AFGRLK +FR ++ ++C + H P I+ AC +++N
Sbjct: 194 VGALDGCHFPV-SPPKEYASDYYNYKGWYSVILLALVDHNYMFRFINVGSPGRCHDAHVYHQSSLSRLIEGPTFRTPKTTLGNVAVPPLVLCDQAFPLTPNLMKPFASTSCSEEQKHFNYQLSKSRRIVENAFGRLKARFRFIMKRMECDISHAPIIIRACCVLNN 358
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: protein (ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like n=3 Tax=Cyprinidae TaxID=7953 RepID=UPI001C896B2A) HSP 1 Score: 112 bits (279), Expect = 3.050e-23 Identity = 72/219 (32.88%), Postives = 119/219 (54.34%), Query Frame = 1
Query: 10 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQPVNSRRLFANGACI----LGDSAFAESPWMRTPIGKPNSRA--ERFFNYKHSSMRSRLEHAFGRLKKKFRALLNGLDCHLEHCPTIVNACVIVHNFIFMREGESPADHGVDNAPTRNGTGRALSQGAGPHGSE-RAREVDYLRR 645
+GAIDGSHI I+AP D Y+N K ++SI + A+VD +G+F C G PG+ D+ VL ++ ++M+ + P+N ++ +G+ + +GDSA+ W+ P +S ++ FN + SS RS ++ +FGRLK ++R LL DC LE +V C ++HN R D + + +AL++ P G++ +A +DY R
Sbjct: 192 VGAIDGSHIPIIAPED-YPRDYFNRKGWHSIIMQAVVDGKGLFWDLCVGYPGSVHDASVLKESHLWKMLND--GHPLNQSKVHISGSDVGYYLIGDSAYPLQKWLMKPFADTSSLTPQQQRFNLRLSSARSVVDLSFGRLKARWRCLLKRNDCKLELIKKMVLTCCVLHNICEERGDRFSEDLSAIHVNMQPPV-QALTEHGRPEGTDVQAALLDYFNR 406
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Match: DDE (Tnp4 domain-containing protein n=2 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2PWM6_FUNHE) HSP 1 Score: 110 bits (276), Expect = 4.420e-23 Identity = 69/195 (35.38%), Postives = 108/195 (55.38%), Query Frame = 1
Query: 10 IGAIDGSHIKILAPPDSLQTSYYNYKHFYSISLLAIVDNEGMFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQPVNSRRLFANGAC----ILGDSAFAESPWMRTPIGKP--NSRAERFFNYKHSSMRSRLEHAFGRLKKKFRALLNGLDCHLEHCPTIVNACVIVHNFIFMREGESPADHGVDNA---PTRN 567
IGA+DGSHI I+AP + + Y+N K +YSI++ A+VD+ MFR C G PG+ D+ VL+++ Y+ + + + +G ILGD A+ PW+ P + + A++ +N HS R +E+AFGRLK ++R LL +D + + P ++ AC +HN I +GE D + A PT N
Sbjct: 157 IGAVDGSHIPIVAPQEK-RVDYFNRKGWYSINMQALVDDRYMFRDLCIGWPGSTPDAHVLVNSQLYQFWENGVFPHIQTE---IDGVMVPPVILGDPAYPLLPWLMKPYPENAGTTEAQKKYNLIHSRNRMVVENAFGRLKGRWRRLLKRIDNKISNVPNVIAACCTLHN-ICETQGEDFLDQWANEANQPPTNN 346 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8143.16298.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8143.16298.1 >prot_E_fasciculatus_S2_contig8143.16298.1 ID=prot_E_fasciculatus_S2_contig8143.16298.1|Name=mRNA_E_fasciculatus_S2_contig8143.16298.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=205bp MFRWFCSGAPGACADSGVLMDTAFYEMVQEDQAQPVNSRRLFANGACILGback to top mRNA from alignment at E_fasciculatus_S2_contig8143:5056..6507+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8143.16298.1 ID=mRNA_E_fasciculatus_S2_contig8143.16298.1|Name=mRNA_E_fasciculatus_S2_contig8143.16298.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1452bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8143:5056..6507+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8143:5056..6507+ >mRNA_E_fasciculatus_S2_contig8143.16298.1 ID=mRNA_E_fasciculatus_S2_contig8143.16298.1|Name=mRNA_E_fasciculatus_S2_contig8143.16298.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=615bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8143:5056..6507+ (Ectocarpus fasciculatus EfasUO2)back to top |