mRNA_E_fasciculatus_S2_contig8085.16241.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: AB (hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J608_9PHAE) HSP 1 Score: 647 bits (1670), Expect = 4.200e-229 Identity = 329/394 (83.50%), Postives = 346/394 (87.82%), Query Frame = 1
Query: 1 MLRRADAATAAAARWSFAKQGVPAVAVRCLSQRLRHPQGFPAVPSSARGDGRRCSSXXXXXXXXXTSPIDFAAPPEDLEDGYFERPTPLLLVAGEGQPAAWWKDTASFLASRGCTVGTMTLTGRGSSPTDTLTLRALQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGTLANEHLLRARAGDPGEANDP-AGPSPSLGAQELAQLMKDDPAHWEGLLRRYFSEFHQQSPWHNAPMPCPRHDLKRGVIKEENRHSISSCTSPDPRFPVKAFAQMCLSETSSTLRLESHVVETLVLGSSLATSATNSSSPGGRGGTDGVAALDRARRDGLSAICEFHGTDGWREVDHRGVVADGVDMPENSPPWQEVVWEWYDARF 1179
MLRRADAA AAAA+WS AK V AVAVRCLSQR+ +PQGFPA+PSSARGDGRRCSS T IDFA PP L+DGYFE+PTPLLLVAGEG+PAAWWKDT SF ASRGCTVGTM LTGRGSSPTDTLTLRALQAGVAAAV+KSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPP+PG LANEHLLRARAGDPGE NDP AG SLGAQELAQLMKDDPAHWEGLLRRYFSEFHQ SPWHNAP+ CPR+DL+RGVIKEENRHS C+SPDPRFPVKAFAQMCLSETSSTLRLESH VETLVLGS +ATSAT++S GG G DG AALD AR D LSAICEFHGTDGWREVDHRGVV DG MPEN+PPWQEVVWEWYDARF
Sbjct: 1 MLRRADAAAAAAAQWSSAKATVTAVAVRCLSQRIPYPQGFPALPSSARGDGRRCSSSSGSSS---TPAIDFAVPPAVLDDGYFEKPTPLLLVAGEGRPAAWWKDTTSFFASRGCTVGTMALTGRGSSPTDTLTLRALQAGVAAAVDKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPAPGALANEHLLRARAGDPGEPNDPVAGAPASLGAQELAQLMKDDPAHWEGLLRRYFSEFHQHSPWHNAPLSCPRYDLERGVIKEENRHS--PCSSPDPRFPVKAFAQMCLSETSSTLRLESHAVETLVLGSGMATSATSTSKTGGSGCADGGAALDDARSDALSAICEFHGTDGWREVDHRGVVTDGNGMPENAPPWQEVVWEWYDARF 389
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: Hydrolase, (alpha/beta fold family protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6S5_ECTSI) HSP 1 Score: 302 bits (773), Expect = 2.300e-96 Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 1
Query: 220 PPEDLEDGYFERPTPLLLVAGEGQPAAWWKDTASFLASRGCTVGTMTLTGRGSSPTDTLTLRALQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGTLANEHLLRARAGDPGEANDP-AGPSPSLGAQELAQLMKDDPAHWEGLLR 711
PPEDLEDGYFERPTPLLLVAGEGQPAAWWKDT SF ASRGCTVGTM LTGRGSSPTDTLTLRALQAGVAAAV++SGLTPPVI+AHSMAGFVCQQYLQSYSASGLVLL+SFPPSPG LANEHLLRARAGDPGE ND AGPS SLGAQELAQLMKDDPAHWEGLLR
Sbjct: 2 PPEDLEDGYFERPTPLLLVAGEGQPAAWWKDTTSFFASRGCTVGTMALTGRGSSPTDTLTLRALQAGVAAAVDQSGLTPPVIMAHSMAGFVCQQYLQSYSASGLVLLESFPPSPGALANEHLLRARAGDPGEPNDHVAGPSASLGAQELAQLMKDDPAHWEGLLR 166
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: AB (hydrolase-1 domain-containing protein n=1 Tax=Mycobacterium gordonae TaxID=1778 RepID=A0A0Q2QE95_MYCGO) HSP 1 Score: 65.9 bits (159), Expect = 3.010e-8 Identity = 49/120 (40.83%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 256 PTPLLLVAGEGQPAAWWKDT-ASFLASRGCTVGTMTLTGRGSSPTDTLTLRALQAGVA--AAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPS-----PGTLANEHLLR 591
P PLL V G A W + F AS G V +L G G+SP TL ++ VA A+V +S TPPV++ HSM GFV Q YL ++A+G +LL S PS G +A H +R
Sbjct: 15 PVPLLFVHGAWHAAWCWDEHFLDFFASHGYRVVAPSLRGHGASP-GTLRWARIRDYVADVASVAQSLPTPPVVIGHSMGGFVVQHYLTRHTAAGAILLASIRPSGVLRVTGRIARRHPVR 133
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: Non-heme (chloroperoxidase n=4 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A0J6VVA3_9MYCO) HSP 1 Score: 65.1 bits (157), Expect = 5.450e-8 Identity = 57/167 (34.13%), Postives = 76/167 (45.51%), Query Frame = 1
Query: 256 PTPLLLVAGEGQPAAWWKDT-ASFLASRGCTVGTMTLTGRGSSPTDT----LTLRALQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGTLANEHLLRARAGDPGEANDPAGPSPSLGAQELAQLMKDDPAHWEGLLRRYFSEFHQQS 741
P PLL V G A W + S+ A RG ++L G G S TD T +A VAA V + TPPV+V HSM GFV Q+YL+S+ A VL+ S PP + LR + + P + ELA+ P E L+RR ++S
Sbjct: 15 PAPLLFVHGAWHAAWCWDEHFLSWFADRGYRALALSLRGHGGSSTDKPLNDCTFDDYEADVAA-VAATLATPPVLVGHSMGGFVVQKYLESHEAPAAVLMASMPPQGYLRSGLRWLRRHPWHFAKMSVTRKTLPYVSTPELARERFFSPHTPEDLVRRSIERLGEES 180
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: Alpha/beta (hydrolase n=2 Tax=Mycolicibacterium austroafricanum TaxID=39687 RepID=A0A2S8KR19_MYCAO) HSP 1 Score: 63.9 bits (154), Expect = 1.330e-7 Identity = 54/167 (32.34%), Postives = 76/167 (45.51%), Query Frame = 1
Query: 256 PTPLLLVAGEGQPAAWWKDT-ASFLASRGCTVGTMTLTGRGSSPTDTLTLRALQAGV----AAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGTLANEHLLRARAGDPGEANDPAGPSPSLGAQELAQLMKDDPAHWEGLLRRYFSEFHQQS 741
P P+L V G A W + F ASRG ++L G G S T LRAL AV + TPP++V HSM GF+ Q+YL+ +SA VL+ S PP+ + LR + + P + LA+ P E L+RRY + ++S
Sbjct: 15 PAPVLFVHGAWHAAWCWDEHFLDFFASRGYRAVALSLQGHGHSGTSK-PLRALSFDDYLQDITAVADTLATPPIVVGHSMGGFLVQKYLEHHSAPAAVLMASMPPTGYLASGLRWLRRHPWHFAKVSITGRSLPYVSTPPLARERFFSPQTPEALVRRYAARIQEES 180
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: alpha/beta (fold hydrolase n=1 Tax=Mycolicibacterium litorale TaxID=758802 RepID=UPI001FAAADDB) HSP 1 Score: 63.5 bits (153), Expect = 1.890e-7 Identity = 51/120 (42.50%), Postives = 62/120 (51.67%), Query Frame = 1
Query: 256 PTPLLLVAGEGQPAAWWKDT--ASFLASRGCTVGTMTLTGRGSSPTDTLTLRALQAGVAAAVEK-----SGLTP-PVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGTLANEHLLR 591
P PLL V G G AAW D F A RG V +L G GSSPT R L +A VE + LT PV++ HSM GF+ Q+YLQ++SA VL+ S PP A L+R
Sbjct: 18 PAPLLFVHG-GSHAAWCWDEHFLDFFADRGYRVLAPSLRGHGSSPTSK---RLLTCSIADYVEDVCSVANNLTAAPVLIGHSMGGFIVQKYLQTHSAPAGVLITSTPPHGHLGAQLRLIR 133
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: alpha/beta (fold hydrolase n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00132F66D8) HSP 1 Score: 57.8 bits (138), Expect = 1.160e-6 Identity = 40/94 (42.55%), Postives = 51/94 (54.26%), Query Frame = 1
Query: 256 PTPLLLVAGEGQPAAWWKDT-ASFLASRGCTVGTMTLTGRGSSPTDTLTLRALQAGV----AAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSA 522
P PLL V G A W + +F A +G V +L G G+SPTD T RAL A V TPPV++ HSM GF+ Q+YL+S+SA
Sbjct: 19 PVPLLFVHGAWHAAWCWDEHFLNFFADKGYRVVAPSLRGHGNSPTDK-TFRALSIADYVDDVATVAADLPTPPVVIGHSMGGFIVQKYLESHSA 111
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: Alpha/beta (fold hydrolase n=2 Tax=Rugosibacter TaxID=1914449 RepID=A0A522Y103_9RHOO) HSP 1 Score: 60.8 bits (146), Expect = 1.760e-6 Identity = 47/121 (38.84%), Postives = 64/121 (52.89%), Query Frame = 1
Query: 259 TPLLLVAGEGQPAAWWKDT-ASFLASRGCTVGTMTLTGRGSSP----TDTLTLRALQAGVAAAVEKSGL-TPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPSPGTLANEHLLRARAG 603
TPLL + G A W + F A G ++L+G G+SP DTL++ VA AV +GL PPV++ HSM GFV Q+YL+ ++A VL+ S PP A LL +R G
Sbjct: 23 TPLLFIHGAFTAAWCWDEHFLPFFAEAGYIAHALSLSGHGASPGHDRLDTLSIDDYVNDVAIAV--AGLPAPPVLIGHSMGGFVVQKYLEKHTAPAAVLMCSVPPQGLLSAAVGLLFSRPG 141
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: Alpha/beta (hydrolase n=4 Tax=Mycobacterium TaxID=1763 RepID=A0A1A3K5T7_MYCGO) HSP 1 Score: 60.5 bits (145), Expect = 1.910e-6 Identity = 48/129 (37.21%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 229 DLEDGYFERPTPLLLVAGEGQPAAWWKDT-ASFLASRGCTVGTMTLTGRGSSPTDT--LTLRALQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPPS-----PGTLANEHLLR 591
D D E P PLL V G A W + F A G V +L G G+SP +R A VA+ E S TPPV++ HSM GFV Q YL ++A+G +LL S P G +A H ++
Sbjct: 6 DKGDPTDEHPVPLLFVHGAWHGAWCWDEHFLDFFAGHGYRVVAPSLRGHGASPGALRGARIRDYVADVASTAE-SLPTPPVVIGHSMGGFVVQHYLTRHTAAGAILLASIRPRGVLRVTGRIARRHPVQ 133
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Match: Alpha/beta (hydrolase fold family protein n=31 Tax=Mycobacterium avium complex (MAC) TaxID=120793 RepID=X8B8G9_MYCAV) HSP 1 Score: 60.5 bits (145), Expect = 1.970e-6 Identity = 43/111 (38.74%), Postives = 57/111 (51.35%), Query Frame = 1
Query: 241 GYFERPTPLLLVAGEGQPAAW-WKDTASFLASRGCTVGTMTLTGRGSSPTDTLTLRA-----LQAGVAAAVEKSGLTPPVIVAHSMAGFVCQQYLQSYSASGLVLLDSFPP 555
G E PTPLL V G G AAW W++ F A G ++L G G+SPT R L A A E G P+++ HS+ GFV Q+YL+++ VL+ S PP
Sbjct: 10 GSAEHPTPLLFVHG-GWHAAWCWENFLDFFADAGYRAVALSLRGHGASPTSKPLHRVSIADYLDDVAAVAGELGGA--PILIGHSLGGFVIQRYLETHRVPAAVLVGSVPP 117 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8085.16241.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8085.16241.1 >prot_E_fasciculatus_S2_contig8085.16241.1 ID=prot_E_fasciculatus_S2_contig8085.16241.1|Name=mRNA_E_fasciculatus_S2_contig8085.16241.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=394bp MLRRADAATAAAARWSFAKQGVPAVAVRCLSQRLRHPQGFPAVPSSARGDback to top mRNA from alignment at E_fasciculatus_S2_contig8085:3348..6806+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8085.16241.1 ID=mRNA_E_fasciculatus_S2_contig8085.16241.1|Name=mRNA_E_fasciculatus_S2_contig8085.16241.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3459bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8085:3348..6806+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8085:3348..6806+ >mRNA_E_fasciculatus_S2_contig8085.16241.1 ID=mRNA_E_fasciculatus_S2_contig8085.16241.1|Name=mRNA_E_fasciculatus_S2_contig8085.16241.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1182bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8085:3348..6806+ (Ectocarpus fasciculatus EfasUO2)back to top |