mRNA_E_fasciculatus_S2_contig806.16219.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Dynein (heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS99_ECTSI) HSP 1 Score: 495 bits (1274), Expect = 1.300e-157 Identity = 235/239 (98.33%), Postives = 237/239 (99.16%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMT+WVD+GIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEP TALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNK NTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY
Sbjct: 1339 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTSWVDNGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPRTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKANTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 1577
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBK8_9STRA) HSP 1 Score: 358 bits (919), Expect = 5.070e-118 Identity = 162/240 (67.50%), Postives = 197/240 (82.08%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALST-PEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
+Q+ALKG VVLSAELEAMGN+ FDQ VP W + YPSLKPLGPW++DL+ RL F+T W++ G P +WISGFFFPQG+LTA QN+ARK+ PID+ +F F ++E ++ PEDG FI+GLFLEGA W+K +TLVDP+PKELFSPMP +H+LPEQ+R TPQ+ IYRCPVYK+LTRTG LSTTGHSTNFV WIE+PSNK FR+SLVSETN Q+++CDQDYWIKAG ACFCAL+Y
Sbjct: 99 LQRALKGFVVLSAELEAMGNACFDQRVPTSWTNSAYPSLKPLGPWFKDLMQRLTFITTWIERGTPAAYWISGFFFPQGYLTAILQNYARKYQFPIDTVSFNFVMREESSEEITAKPEDGCFIYGLFLEGARWNKKQQTLVDPKPKELFSPMPTIHMLPEQNRSTPQSNIYRCPVYKVLTRTGTLSTTGHSTNFVTWIEVPSNKKTIFRSSLVSETNAQIKFCDQDYWIKAGVACFCALKY 338
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Dynein (heavy chain and region D6 of dynein motor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAS0_9STRA) HSP 1 Score: 369 bits (947), Expect = 2.520e-110 Identity = 167/239 (69.87%), Postives = 201/239 (84.10%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
+QKAL+GLVVLSAELEAM S++DQ VP +WQ+ YPSLKPLGPW+ DLL RL F+ +WV+HGIP VFWISGFFFPQGFLTA QN+AR+H VP+D+ +FAF + E AL+ P DG+++HGLFLEGA WD + L DPRPKELFS MPV+HL PE+DR P G+YRCPVYK+LTRTG LSTTGHSTNFVFWIEIP++KP+ +R+SLVSETNKQVQ+CDQ+Y++KAG ACFCALRY
Sbjct: 3342 LQKALRGLVVLSAELEAMAASIYDQQVPGIWQTHAYPSLKPLGPWFADLLARLAFVADWVEHGIPAVFWISGFFFPQGFLTASLQNYARRHGVPVDALSFAFRARREAPAALARPADGVYVHGLFLEGARWDAARGALADPRPKELFSAMPVLHLAPERDRAAPSGGVYRCPVYKVLTRTGTLSTTGHSTNFVFWIEIPADKPDCWRSSLVSETNKQVQFCDQEYYVKAGVACFCALRY 3580
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Dnah1 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TL43_SYMMI) HSP 1 Score: 354 bits (909), Expect = 6.380e-110 Identity = 168/243 (69.14%), Postives = 194/243 (79.84%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPH----TALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
+QKALKGLVVLSAELE MGN MFDQ VPA W +K YPSLKPLGPW +DLL RL F+ NW+D G P FWISGFFFPQGFLTA QNFARKH +PID+ +F+F +D + P+DG FI+GLFLEGA W +LVDP+PKELFSPMP +H+LPEQ+R+ P GIYRCPVYK+LTRTG LSTTGHSTNFV WIEIPS+K +R+SLVSETN Q+++CDQDYWIKAG ACFCALRY
Sbjct: 638 LQKALKGLVVLSAELEKMGNDMFDQRVPAGWTAKAYPSLKPLGPWTKDLLLRLNFLQNWIDSGTPSSFWISGFFFPQGFLTAILQNFARKHQMPIDTVSFSFILQDAMEGGDDSKRPKPDDGCFIYGLFLEGARWSYDDLSLVDPKPKELFSPMPAIHMLPEQNRDAPSGGIYRCPVYKVLTRTGTLSTTGHSTNFVTWIEIPSDKDTVWRSSLVSETNAQIKFCDQDYWIKAGVACFCALRY 880
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F084_9STRA) HSP 1 Score: 329 bits (844), Expect = 1.910e-105 Identity = 153/240 (63.75%), Postives = 188/240 (78.33%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAF-HFKDEPHTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
VQK LKGL+VLS+ELE+MGNS++DQ VP +W+ K YPSLKPL W DL+DRL F++NW+D GIP VFWISGFFFPQGF+T QN AR+ +PID+ +F F + + H P +G +++GLFLEGA W+K + +L DP PKELF+ MP++HL P+Q R+ P GIYRCPVYKILTRTG LSTTGHSTNFV WIEIPS +P +R SLVSETN QV +CDQ+YWIKAG ACFC+LRY
Sbjct: 189 VQKGLKGLIVLSSELESMGNSLYDQKVPTLWEGKAYPSLKPLTLWVADLIDRLTFISNWIDKGIPTVFWISGFFFPQGFMTGIIQNHARRQKLPIDTLSFQFIMMQQDLHDVTDRPAEGCYVYGLFLEGARWNKELASLDDPFPKELFAKMPLMHLHPQQKRQAPTGGIYRCPVYKILTRTGTLSTTGHSTNFVMWIEIPSIRPTIWRNSLVSETNAQVLFCDQEYWIKAGVACFCSLRY 428
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B137_9STRA) HSP 1 Score: 342 bits (876), Expect = 5.260e-104 Identity = 157/240 (65.42%), Postives = 188/240 (78.33%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALST-PEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
+Q+ALKGLVVLS EL+ MG M++Q VP +W YPSLKPL PW +DL RL F+ +W++H PPVFW+SGFFFPQGF+TA QN ARK+ +PID+ + + EP L+ P DG ++HGLFLEG WD+ R+LVDPRPKELFSPMPV+HL+PEQ R+ PQ GIYRCPVYKILTRTGVLSTTGHSTNFVFW+ +PSNKP FR +L SETN QV++CDQDYWIK G ACF ALRY
Sbjct: 768 IQRALKGLVVLSTELDQMGTQMYNQFVPDLWSKVAYPSLKPLNPWIEDLTGRLNFIGDWIEHNQPPVFWLSGFFFPQGFMTANLQNHARKYGLPIDTVSLSQQMMSEPLEDLTAQPTDGCYVHGLFLEGGRWDRRKRSLVDPRPKELFSPMPVLHLVPEQFRKEPQDGIYRCPVYKILTRTGVLSTTGHSTNFVFWLAVPSNKPTIFRNALCSETNDQVKFCDQDYWIKGGVACFLALRY 1007
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZV8_HETAK) HSP 1 Score: 343 bits (881), Expect = 1.340e-102 Identity = 161/240 (67.08%), Postives = 192/240 (80.00%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTAL-STPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
VQ+ALKG V+LS+ELEAMG++MF+Q VP W++K YPSLKPL PWY DLL R F+ +W++ GIP V+WISGFFFPQGF+T QNFARK+ +PID+ + + +E L P+DG +I GLFLEGA W K + LVDP+PKELFSPMPV+HL PEQ R+ P+ GIYRCPVYKILTRTG LSTTGHSTNFV WIEIPSNK +R+SLVSETN QV++CDQDYWIKAG ACFCALRY
Sbjct: 1131 VQRALKGQVLLSSELEAMGDNMFNQLVPQNWEAKAYPSLKPLTPWYDDLLRRCKFLADWIEEGIPSVYWISGFFFPQGFMTGIVQNFARKYQLPIDTVSLGYKMMEESAEQLVEKPKDGAYIDGLFLEGARWHKGRKELVDPKPKELFSPMPVIHLQPEQGRQQPKGGIYRCPVYKILTRTGTLSTTGHSTNFVCWIEIPSNKATIWRSSLVSETNAQVKFCDQDYWIKAGVACFCALRY 1370
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH99_PYTOL) HSP 1 Score: 345 bits (884), Expect = 6.660e-102 Identity = 162/240 (67.50%), Postives = 190/240 (79.17%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHF-KDEPHTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
VQK LKGLVV+SAELEAMGNS++DQ VP VW+SK YPSLKPL PW +DLLDRL F+T W++HGIP VFWISGFFFPQGF+T QN ARK+ +PIDS +F F + E H S PE+G + +GLFLEGA W+K L DP P+ELF+ MPV+HL P+ R+ P+ GIYRCPVYKILTRTG LSTTGHSTNFV WIEIP+ K +R SLVSETN Q+ +CDQ+YWIKAG ACFCALRY
Sbjct: 3978 VQKGLKGLVVMSAELEAMGNSLYDQKVPTVWESKAYPSLKPLSPWVKDLLDRLHFITEWIEHGIPAVFWISGFFFPQGFMTGTIQNHARKYKLPIDSLSFEFIMSQQELHDLTSRPENGCYTYGLFLEGARWNKDTHALDDPLPRELFAKMPVIHLNPQPHRQPPKEGIYRCPVYKILTRTGTLSTTGHSTNFVMWIEIPAKKKTIWRNSLVSETNAQILFCDQEYWIKAGVACFCALRY 4217
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Sporangia (induced dynein heavy chain n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MZ61_PHYIT) HSP 1 Score: 342 bits (877), Expect = 5.720e-101 Identity = 161/240 (67.08%), Postives = 192/240 (80.00%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALST-PEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
VQ+ LKGLVV+SAELEAMG S++DQ VPAVW++K YPSLKPLG W +DLL+RL F++NW+ HGIP VFWISGFFFPQGF+T QN AR++ +PIDS +F F K E L+ P DG + +GLFLEGA W+ + L DP P+ELF+ MPV+HLLP+ +RE PQ GIYRCPVYKILTRTG LSTTGHSTNFV W+EIP+NKP FR SLVSETN QV + DQ+YWIKAG ACFC+LRY
Sbjct: 3949 VQQGLKGLVVMSAELEAMGASLYDQKVPAVWEAKAYPSLKPLGAWVKDLLERLTFISNWIAHGIPAVFWISGFFFPQGFMTGTIQNHARRYKLPIDSLSFQFIMKPESVEQLTARPVDGCYTYGLFLEGARWNPETKALDDPLPRELFAKMPVIHLLPQPNREAPQRGIYRCPVYKILTRTGTLSTTGHSTNFVMWLEIPANKPTIFRNSLVSETNSQVLFADQEYWIKAGVACFCSLRY 4188
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Uncharacterized (protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=W2Z3S7_PHYPR) HSP 1 Score: 341 bits (875), Expect = 1.020e-100 Identity = 161/240 (67.08%), Postives = 192/240 (80.00%), Query Frame = 3
Query: 3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALST-PEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
VQ+ LKGLVV+SAELEAMG S++DQ VPAVW++K YPSLKPLG W +DLL+RL F++NW+ HGIP VFWISGFFFPQGF+T QN AR++ +PIDS +F F K E L+ P DG + +GLFLEGA W+ + L DP P+ELF+ MPV+HLLP+ +RE PQ GIYRCPVYKILTRTG LSTTGHSTNFV W+EIP+NKP FR SLVSETN QV + DQ+YWIKAG ACFC+LRY
Sbjct: 2748 VQQGLKGLVVMSAELEAMGASLYDQKVPAVWEAKAYPSLKPLGAWVKDLLERLTFISNWIAHGIPAVFWISGFFFPQGFMTGTIQNHARRYKLPIDSLSFQFIMKPESVEQLTARPVDGCYTYGLFLEGARWNPEITALDDPLPRELFAKMPVIHLLPQPNREAPQRGIYRCPVYKILTRTGTLSTTGHSTNFVMWLEIPANKPTIFRNSLVSETNAQVLFADQEYWIKAGVACFCSLRY 2987 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig806.16219.1 >prot_E_fasciculatus_S2_contig806.16219.1 ID=prot_E_fasciculatus_S2_contig806.16219.1|Name=mRNA_E_fasciculatus_S2_contig806.16219.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=223bp MGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVback to top mRNA from alignment at E_fasciculatus_S2_contig806:1167..5035+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig806.16219.1 ID=mRNA_E_fasciculatus_S2_contig806.16219.1|Name=mRNA_E_fasciculatus_S2_contig806.16219.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3869bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig806:1167..5035+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig806:1167..5035+ >mRNA_E_fasciculatus_S2_contig806.16219.1 ID=mRNA_E_fasciculatus_S2_contig806.16219.1|Name=mRNA_E_fasciculatus_S2_contig806.16219.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=669bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig806:1167..5035+ (Ectocarpus fasciculatus EfasUO2)back to top |