mRNA_E_fasciculatus_S2_contig806.16219.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig806.16219.1
Unique NamemRNA_E_fasciculatus_S2_contig806.16219.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Dynein (heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS99_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 1.300e-157
Identity = 235/239 (98.33%), Postives = 237/239 (99.16%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMT+WVD+GIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEP TALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNK NTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY
Sbjct: 1339 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTSWVDNGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPRTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKANTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 1577          
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBK8_9STRA)

HSP 1 Score: 358 bits (919), Expect = 5.070e-118
Identity = 162/240 (67.50%), Postives = 197/240 (82.08%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALST-PEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            +Q+ALKG VVLSAELEAMGN+ FDQ VP  W +  YPSLKPLGPW++DL+ RL F+T W++ G P  +WISGFFFPQG+LTA  QN+ARK+  PID+ +F F  ++E    ++  PEDG FI+GLFLEGA W+K  +TLVDP+PKELFSPMP +H+LPEQ+R TPQ+ IYRCPVYK+LTRTG LSTTGHSTNFV WIE+PSNK   FR+SLVSETN Q+++CDQDYWIKAG ACFCAL+Y
Sbjct:   99 LQRALKGFVVLSAELEAMGNACFDQRVPTSWTNSAYPSLKPLGPWFKDLMQRLTFITTWIERGTPAAYWISGFFFPQGYLTAILQNYARKYQFPIDTVSFNFVMREESSEEITAKPEDGCFIYGLFLEGARWNKKQQTLVDPKPKELFSPMPTIHMLPEQNRSTPQSNIYRCPVYKVLTRTGTLSTTGHSTNFVTWIEVPSNKKTIFRSSLVSETNAQIKFCDQDYWIKAGVACFCALKY 338          
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Dynein (heavy chain and region D6 of dynein motor-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAS0_9STRA)

HSP 1 Score: 369 bits (947), Expect = 2.520e-110
Identity = 167/239 (69.87%), Postives = 201/239 (84.10%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            +QKAL+GLVVLSAELEAM  S++DQ VP +WQ+  YPSLKPLGPW+ DLL RL F+ +WV+HGIP VFWISGFFFPQGFLTA  QN+AR+H VP+D+ +FAF  + E   AL+ P DG+++HGLFLEGA WD +   L DPRPKELFS MPV+HL PE+DR  P  G+YRCPVYK+LTRTG LSTTGHSTNFVFWIEIP++KP+ +R+SLVSETNKQVQ+CDQ+Y++KAG ACFCALRY
Sbjct: 3342 LQKALRGLVVLSAELEAMAASIYDQQVPGIWQTHAYPSLKPLGPWFADLLARLAFVADWVEHGIPAVFWISGFFFPQGFLTASLQNYARRHGVPVDALSFAFRARREAPAALARPADGVYVHGLFLEGARWDAARGALADPRPKELFSAMPVLHLAPERDRAAPSGGVYRCPVYKVLTRTGTLSTTGHSTNFVFWIEIPADKPDCWRSSLVSETNKQVQFCDQEYYVKAGVACFCALRY 3580          
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Dnah1 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TL43_SYMMI)

HSP 1 Score: 354 bits (909), Expect = 6.380e-110
Identity = 168/243 (69.14%), Postives = 194/243 (79.84%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPH----TALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            +QKALKGLVVLSAELE MGN MFDQ VPA W +K YPSLKPLGPW +DLL RL F+ NW+D G P  FWISGFFFPQGFLTA  QNFARKH +PID+ +F+F  +D       +    P+DG FI+GLFLEGA W     +LVDP+PKELFSPMP +H+LPEQ+R+ P  GIYRCPVYK+LTRTG LSTTGHSTNFV WIEIPS+K   +R+SLVSETN Q+++CDQDYWIKAG ACFCALRY
Sbjct:  638 LQKALKGLVVLSAELEKMGNDMFDQRVPAGWTAKAYPSLKPLGPWTKDLLLRLNFLQNWIDSGTPSSFWISGFFFPQGFLTAILQNFARKHQMPIDTVSFSFILQDAMEGGDDSKRPKPDDGCFIYGLFLEGARWSYDDLSLVDPKPKELFSPMPAIHMLPEQNRDAPSGGIYRCPVYKVLTRTGTLSTTGHSTNFVTWIEIPSDKDTVWRSSLVSETNAQIKFCDQDYWIKAGVACFCALRY 880          
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F084_9STRA)

HSP 1 Score: 329 bits (844), Expect = 1.910e-105
Identity = 153/240 (63.75%), Postives = 188/240 (78.33%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAF-HFKDEPHTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            VQK LKGL+VLS+ELE+MGNS++DQ VP +W+ K YPSLKPL  W  DL+DRL F++NW+D GIP VFWISGFFFPQGF+T   QN AR+  +PID+ +F F   + + H     P +G +++GLFLEGA W+K + +L DP PKELF+ MP++HL P+Q R+ P  GIYRCPVYKILTRTG LSTTGHSTNFV WIEIPS +P  +R SLVSETN QV +CDQ+YWIKAG ACFC+LRY
Sbjct:  189 VQKGLKGLIVLSSELESMGNSLYDQKVPTLWEGKAYPSLKPLTLWVADLIDRLTFISNWIDKGIPTVFWISGFFFPQGFMTGIIQNHARRQKLPIDTLSFQFIMMQQDLHDVTDRPAEGCYVYGLFLEGARWNKELASLDDPFPKELFAKMPLMHLHPQQKRQAPTGGIYRCPVYKILTRTGTLSTTGHSTNFVMWIEIPSIRPTIWRNSLVSETNAQVLFCDQEYWIKAGVACFCSLRY 428          
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B137_9STRA)

HSP 1 Score: 342 bits (876), Expect = 5.260e-104
Identity = 157/240 (65.42%), Postives = 188/240 (78.33%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALST-PEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            +Q+ALKGLVVLS EL+ MG  M++Q VP +W    YPSLKPL PW +DL  RL F+ +W++H  PPVFW+SGFFFPQGF+TA  QN ARK+ +PID+ + +     EP   L+  P DG ++HGLFLEG  WD+  R+LVDPRPKELFSPMPV+HL+PEQ R+ PQ GIYRCPVYKILTRTGVLSTTGHSTNFVFW+ +PSNKP  FR +L SETN QV++CDQDYWIK G ACF ALRY
Sbjct:  768 IQRALKGLVVLSTELDQMGTQMYNQFVPDLWSKVAYPSLKPLNPWIEDLTGRLNFIGDWIEHNQPPVFWLSGFFFPQGFMTANLQNHARKYGLPIDTVSLSQQMMSEPLEDLTAQPTDGCYVHGLFLEGGRWDRRKRSLVDPRPKELFSPMPVLHLVPEQFRKEPQDGIYRCPVYKILTRTGVLSTTGHSTNFVFWLAVPSNKPTIFRNALCSETNDQVKFCDQDYWIKGGVACFLALRY 1007          
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZV8_HETAK)

HSP 1 Score: 343 bits (881), Expect = 1.340e-102
Identity = 161/240 (67.08%), Postives = 192/240 (80.00%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTAL-STPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            VQ+ALKG V+LS+ELEAMG++MF+Q VP  W++K YPSLKPL PWY DLL R  F+ +W++ GIP V+WISGFFFPQGF+T   QNFARK+ +PID+ +  +   +E    L   P+DG +I GLFLEGA W K  + LVDP+PKELFSPMPV+HL PEQ R+ P+ GIYRCPVYKILTRTG LSTTGHSTNFV WIEIPSNK   +R+SLVSETN QV++CDQDYWIKAG ACFCALRY
Sbjct: 1131 VQRALKGQVLLSSELEAMGDNMFNQLVPQNWEAKAYPSLKPLTPWYDDLLRRCKFLADWIEEGIPSVYWISGFFFPQGFMTGIVQNFARKYQLPIDTVSLGYKMMEESAEQLVEKPKDGAYIDGLFLEGARWHKGRKELVDPKPKELFSPMPVIHLQPEQGRQQPKGGIYRCPVYKILTRTGTLSTTGHSTNFVCWIEIPSNKATIWRSSLVSETNAQVKFCDQDYWIKAGVACFCALRY 1370          
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH99_PYTOL)

HSP 1 Score: 345 bits (884), Expect = 6.660e-102
Identity = 162/240 (67.50%), Postives = 190/240 (79.17%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHF-KDEPHTALSTPEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            VQK LKGLVV+SAELEAMGNS++DQ VP VW+SK YPSLKPL PW +DLLDRL F+T W++HGIP VFWISGFFFPQGF+T   QN ARK+ +PIDS +F F   + E H   S PE+G + +GLFLEGA W+K    L DP P+ELF+ MPV+HL P+  R+ P+ GIYRCPVYKILTRTG LSTTGHSTNFV WIEIP+ K   +R SLVSETN Q+ +CDQ+YWIKAG ACFCALRY
Sbjct: 3978 VQKGLKGLVVMSAELEAMGNSLYDQKVPTVWESKAYPSLKPLSPWVKDLLDRLHFITEWIEHGIPAVFWISGFFFPQGFMTGTIQNHARKYKLPIDSLSFEFIMSQQELHDLTSRPENGCYTYGLFLEGARWNKDTHALDDPLPRELFAKMPVIHLNPQPHRQPPKEGIYRCPVYKILTRTGTLSTTGHSTNFVMWIEIPAKKKTIWRNSLVSETNAQILFCDQEYWIKAGVACFCALRY 4217          
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Sporangia (induced dynein heavy chain n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MZ61_PHYIT)

HSP 1 Score: 342 bits (877), Expect = 5.720e-101
Identity = 161/240 (67.08%), Postives = 192/240 (80.00%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALST-PEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            VQ+ LKGLVV+SAELEAMG S++DQ VPAVW++K YPSLKPLG W +DLL+RL F++NW+ HGIP VFWISGFFFPQGF+T   QN AR++ +PIDS +F F  K E    L+  P DG + +GLFLEGA W+   + L DP P+ELF+ MPV+HLLP+ +RE PQ GIYRCPVYKILTRTG LSTTGHSTNFV W+EIP+NKP  FR SLVSETN QV + DQ+YWIKAG ACFC+LRY
Sbjct: 3949 VQQGLKGLVVMSAELEAMGASLYDQKVPAVWEAKAYPSLKPLGAWVKDLLERLTFISNWIAHGIPAVFWISGFFFPQGFMTGTIQNHARRYKLPIDSLSFQFIMKPESVEQLTARPVDGCYTYGLFLEGARWNPETKALDDPLPRELFAKMPVIHLLPQPNREAPQRGIYRCPVYKILTRTGTLSTTGHSTNFVMWLEIPANKPTIFRNSLVSETNSQVLFADQEYWIKAGVACFCSLRY 4188          
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Match: Uncharacterized (protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=W2Z3S7_PHYPR)

HSP 1 Score: 341 bits (875), Expect = 1.020e-100
Identity = 161/240 (67.08%), Postives = 192/240 (80.00%), Query Frame = 3
Query:    3 VQKALKGLVVLSAELEAMGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPVFWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALST-PEDGLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTGIYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQVQYCDQDYWIKAGAACFCALRY 719
            VQ+ LKGLVV+SAELEAMG S++DQ VPAVW++K YPSLKPLG W +DLL+RL F++NW+ HGIP VFWISGFFFPQGF+T   QN AR++ +PIDS +F F  K E    L+  P DG + +GLFLEGA W+  +  L DP P+ELF+ MPV+HLLP+ +RE PQ GIYRCPVYKILTRTG LSTTGHSTNFV W+EIP+NKP  FR SLVSETN QV + DQ+YWIKAG ACFC+LRY
Sbjct: 2748 VQQGLKGLVVMSAELEAMGASLYDQKVPAVWEAKAYPSLKPLGAWVKDLLERLTFISNWIAHGIPAVFWISGFFFPQGFMTGTIQNHARRYKLPIDSLSFQFIMKPESVEQLTARPVDGCYTYGLFLEGARWNPEITALDDPLPRELFAKMPVIHLLPQPNREAPQRGIYRCPVYKILTRTGTLSTTGHSTNFVMWLEIPANKPTIFRNSLVSETNAQVLFADQEYWIKAGVACFCSLRY 2987          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig806.16219.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Dynein1.300e-15798.33heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
Hypothetical5.070e-11867.50protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Dynein2.520e-11069.87heavy chain and region D6 of dynein motor-domain-c... [more]
Dnah16.380e-11069.14protein n=1 Tax=Symbiodinium microadriaticum TaxID... [more]
Uncharacterized1.910e-10563.75protein n=2 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
Hypothetical5.260e-10465.42protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.340e-10267.08protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized6.660e-10267.50protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Sporangia5.720e-10167.08induced dynein heavy chain n=2 Tax=Phytophthora in... [more]
Uncharacterized1.020e-10067.08protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=W... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig806contigE_fasciculatus_S2_contig806:1167..5035 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score320.1
Seed ortholog evalue8.3e-85
Seed eggNOG ortholog4787.PITG_03018T0
Model size1422
KEGG koko:K10408
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.P-loop containing dynein motor region D4
EggNOG OGs3QCRY@4776,COG5245@1,KOG3595@2759
Cds size669
COG Functional cat.Z
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig806.16219.1prot_E_fasciculatus_S2_contig806.16219.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig806 1220..4335 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842466.9236262-UTR-E_fasciculatus_S2_contig806:1166..12191696842466.9236262-UTR-E_fasciculatus_S2_contig806:1166..1219Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig806 1167..1219 +
1696842467.0088499-UTR-E_fasciculatus_S2_contig806:4335..50351696842467.0088499-UTR-E_fasciculatus_S2_contig806:4335..5035Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig806 4336..5035 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842466.936792-CDS-E_fasciculatus_S2_contig806:1219..12301696842466.936792-CDS-E_fasciculatus_S2_contig806:1219..1230Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 1220..1230 +
1696842466.9476082-CDS-E_fasciculatus_S2_contig806:1527..16631696842466.9476082-CDS-E_fasciculatus_S2_contig806:1527..1663Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 1528..1663 +
1696842466.958753-CDS-E_fasciculatus_S2_contig806:2119..22621696842466.958753-CDS-E_fasciculatus_S2_contig806:2119..2262Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 2120..2262 +
1696842466.9698994-CDS-E_fasciculatus_S2_contig806:2635..27081696842466.9698994-CDS-E_fasciculatus_S2_contig806:2635..2708Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 2636..2708 +
1696842466.9808555-CDS-E_fasciculatus_S2_contig806:2943..30541696842466.9808555-CDS-E_fasciculatus_S2_contig806:2943..3054Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 2944..3054 +
1696842466.9908886-CDS-E_fasciculatus_S2_contig806:3675..38011696842466.9908886-CDS-E_fasciculatus_S2_contig806:3675..3801Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 3676..3801 +
1696842466.9996803-CDS-E_fasciculatus_S2_contig806:4266..43351696842466.9996803-CDS-E_fasciculatus_S2_contig806:4266..4335Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig806 4267..4335 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig806.16219.1

>prot_E_fasciculatus_S2_contig806.16219.1 ID=prot_E_fasciculatus_S2_contig806.16219.1|Name=mRNA_E_fasciculatus_S2_contig806.16219.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=223bp
MGNSMFDQAVPAVWQSKGYPSLKPLGPWYQDLLDRLGFMTNWVDHGIPPV
FWISGFFFPQGFLTAGQQNFARKHDVPIDSTTFAFHFKDEPHTALSTPED
GLFIHGLFLEGACWDKSMRTLVDPRPKELFSPMPVVHLLPEQDRETPQTG
IYRCPVYKILTRTGVLSTTGHSTNFVFWIEIPSNKPNTFRASLVSETNKQ
VQYCDQDYWIKAGAACFCALRY*
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mRNA from alignment at E_fasciculatus_S2_contig806:1167..5035+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig806.16219.1 ID=mRNA_E_fasciculatus_S2_contig806.16219.1|Name=mRNA_E_fasciculatus_S2_contig806.16219.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3869bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig806:1167..5035+ (Ectocarpus fasciculatus EfasUO2)
AGGTCCAGAAAGCTCTCAAGGGTCTCGTCGTTCTCAGTGCGGAGCTAGAG GCCATGGGCAACAGGTACGTGCTGTACCTCCCGTTGATGTTGCTCCCGCG CAACAACAAATCAACTTGAATGTAGGAGATTGAAAGAAGCAGACGGAGAA TAAGTGAGTTTGTCCTTGGCGCAGAGAATGCATTGAGTCGTACCAAACAC ACTCCCCAGGCCTATTCGTCACCAAGCTCCGCGTTGTTGCTCCAGGGAAG GTGTTTTTGGATGTGGCCTACAAACTCCACAGCCGGAAACTTTCTTGAGA CAGACACCAACTGAACTCGAGAGCCCAACCCATTACTTCTTCTTGTGACC CCGGCCCTCAGCATGTTTGACCAAGCCGTTCCAGCGGTGTGGCAGTCGAA GGGCTATCCCAGCCTCAAGCCCCTGGGACCTTGGTACCAAGACCTGTTGG ATCGGCTGGGATTCATGACGAACTGGGTCGACCATGGGATACCACCGGTA CGAAGGAAGAGACAAGACTCTGCGAAACAAATAGAAGCGTAATGCTGTGT TAGGCCGATAACGTGAAAGCCGGTCGCGCTTTGCAAGGCGGGTGAAATCG TGAGACACGGATGGGGCATTCAAGTTGTCTCATTCTCTGGGTAGGGCCGG GTGCCAGGTACGAAGACCAGCCAGATCCCTTGGTCCTAGGCGGCCTTATA CAGGGACCACTACTGTAATGTGTGGGTCGGTGGGAGTGATTTCCGGTGGG ACGATGAAGCGGACCACGCACCACATGCACGTGCGCACTATCTAAGAACG GGGCCCTTTCAAGGTACATAGTCTGCAGCCCTCGCTAAGGCATATAGTCC AGTCGTCGGTGGTGAGTACTTTTGTGTTAGTACTACGAACGATCGGTAGA CTCTAATGCCCTCTTGATTGTTTCGACACCTCCTTGAACAACGACAATGA CAGGTGTTTTGGATCAGTGGCTTCTTCTTCCCCCAGGGCTTTCTCACTGC CGGACAACAGAATTTCGCGAGAAAACATGACGTGCCGATCGACTCCACCA CGTTCGCCTTTCACTTCAAGGACGAGCCGCACACCGCGCTCTCAACGTGA GAGTAGTTATAGCAAACGAGGCCCCATGACCTCCAACGCTACAGACCTGT GGGTGCCTATCCATGTAGGCGGTGACAGGGGGTGACTAGGAACGGAAGGT GCTGCATCAAAGAGCGCATATTGAGTATGCTACACCGAGCTGGAAGGGCA TATTTTTATGTTTGCATCGAGGTGGCATACAGTGGACGGCACGGGTATTC CTCCTAGTGATGTTTGTGGTATCCGATCTAAGCCATGGCCTCATCACGCA TGACCGCAAAGCAGGTTCGCGCATTCACTACGTAAGACCCCACCACTGTA TGTTTGCAATATTTGATACGATTGAAGAAGCATACCCTCCTGCCGTCGCT TGTCCGTTCTCTTCTCAAGGCCTGAGGATGGTCTATTCATCCACGGACTG TTCTTGGAAGGCGCCTGCTGGGACAAATCGATGCGAACGTTGGTGAGCCG CAGCCGCCGCCTTTCCAGAATCTGACCTGCTTTGATTTCGTTGTGTCCTT GGTATGGCAGTTCGTCCTTCTGCCTTGTTTAGACAAAATAATCATCATCA TTTTCGCCATATATATCATCAACAACGACAACAACAACACCAACAAACAC CAACAAAGATAGATAGCGACAAGAGCGCGGACTGAGTGACCTCCCCATTC CCGTGTGGCACTCAACTCACGCAACAGGTTGACCCTCGACCAAAGGAGCT CTTCAGCCCGATGCCCGTTGTCCATCTACTCCCTGAGCAAGACCGAGAGA CGCCACAGACGGGGATCTACCGCTGCCCTGTCTACAAGGTGCGGTATCTG TTACACCAATTCGCCAGACAAACACAAACACAAAAACACTCGCATCGTTG TTGTTGTTGTGGGCGCTCACAATCGCACAACAGTGACCACAACCGCCATC ACGTCGAGACGCTGTCGGTATACGGTATATGCCGAGTTCAACCGTAAGAA CTAACACTACGTAGACTCGGTCTGGTCTGGAATTGTGAGGAGATGGTGGC GTATTTCTACGAGCAACGAGTTGTATCGACAAAGAGGTGCTTGCGCTTTG TTTTGAAACGCTTACGGTCTACTCAAACAACGTTACCCCTGCGAGTAAAG AGTGCGTTCGGATGCTCCAGGGAGACACGCCAATGCTCCAGCTGGAGAAG GGCACCACTGCCTACTATTATACAGGTCGCGAGTAGAAAATTCCCGATCG GGCAGGAGGGTGCATACTCCTTCGTTCAGCGAACTGCGTGCCACACATGT TTTTCTCTTGCCCTTCGTTTTGCCACACCCGGAGGATATCAATTACTTCA TATCAGTTCTGACAAAATCACGACAAGTTTGCTCTGCGTGTTCATGTCAG TCGCAACTCTGTTTCTTCGGCTCGACGCACTCATCTCCTTGCCAATCCGC GTCTACCAGATCTTGACAAGAACCGGGGTTCTCTCAACCACGGGCCACAG CACCAACTTCGTTTTCTGGATAGAGATCCCGAGCAACAAGCCCAACACAT TCAGGGCCAGCCTCGTGTCAGAGACAAACAAACAGGTTAGCAGTGTGGAC TGTCTTCACGTGTACATTCGTTTAGGTCAATTATGAGGGAATCGTATAGA CCAGCGCCCCGCTTGGTGCATTGGCGTTCGTGGTTTCGGTGCTCTGGATA GTGCACGAACGACGGACTACATAGAGTACACCCGCAACGGAAACGTTTGA TAGACTTACCCTACACTCGGGGGACGGGCTAGGCACCGTCGGACTTGTCC ACACACCAGTTTTTGTCGATTTCCTAACTCTTGGGTGTGCCGAAACAACG CACGGAAGTTGAAAAGCCGGATAATTTCTCAAGGCTTCGCATTTGTCGTC GGTTTGTAGCGTTTATCGCCTGGTTATCCGTTGCACGGTCAGCTGCGACG CTGTCATCAGGGCCGCTGGATTGCGTCTTGTGCCCCACACCCGTTGCACT AGCCGCTTGCTTAACTCTCCCCTTCCGATGTCTATCGCGCCGCCCGGCAG GTACAATATTGCGATCAGGATTACTGGATCAAGGCCGGAGCAGCGTGCTT CTGCGCTCTGCGGTACTGATCTGATCGTCGCGGTAGATTTAGGGGAATAC GCAATAGAACGCCGGTACTGGACCTGTACAAGCTGATTGAAATTCGTGTA GGGATGTTCCATTTTGATCTGGACCTGCGCTGGCTATTCGTACGCTTGGG TCAATTTTATTGCCCGATGTTTGCGGAGTTGTCTCGTTTTTTTGCGACCC ACGACATTGAGCTCCCAGACGATTGAGTGAGGGGCAGAGGCGTGGTTTTT CGAACGGGCTACTCGGGGGAGCAGTTGTTGCTGATGTGCGACCGGCATTC TGTGAGATGTGCATTCTGAAACTTTTCTCTCTGAGGTAGACGCCTTCCAC GAGCGTTTTCGTTAACTCTAATCAAGTGGCTGGCTTGTGGGCACAAACGG GGAGCATGTTTATTGCCTGTTGTTGGTTTAGAGGAGAAGGGTGGGGCGAG TGTCCAGATGTATAGTTAGCGCCTAAGCAGACACAGTGTGTCGTACTTTT ACGGGGGGTAAAAACGTGTACTTCTTGTCGTGGTACTATGTAGTAGCTAA TTTCTCCGGTGTAAAGGCTGGGATACAGTCGAGTGAGGTTTTGTGTTTTT CTTGTTTTGAGGGGGCCGAGGCTTGAGGAATGCGTATGGCAGGGATTCTT GTACTGCCCCCCCCATCAACCAAGCCAGACTCGGGCACGGAAAAGCGACG AATGATATTATTGTTTCAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig806:1167..5035+

>mRNA_E_fasciculatus_S2_contig806.16219.1 ID=mRNA_E_fasciculatus_S2_contig806.16219.1|Name=mRNA_E_fasciculatus_S2_contig806.16219.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=669bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig806:1167..5035+ (Ectocarpus fasciculatus EfasUO2)
ATGGGCAACAGCATGTTTGACCAAGCCGTTCCAGCGGTGTGGCAGTCGAA
GGGCTATCCCAGCCTCAAGCCCCTGGGACCTTGGTACCAAGACCTGTTGG
ATCGGCTGGGATTCATGACGAACTGGGTCGACCATGGGATACCACCGGTG
TTTTGGATCAGTGGCTTCTTCTTCCCCCAGGGCTTTCTCACTGCCGGACA
ACAGAATTTCGCGAGAAAACATGACGTGCCGATCGACTCCACCACGTTCG
CCTTTCACTTCAAGGACGAGCCGCACACCGCGCTCTCAACGCCTGAGGAT
GGTCTATTCATCCACGGACTGTTCTTGGAAGGCGCCTGCTGGGACAAATC
GATGCGAACGTTGGTTGACCCTCGACCAAAGGAGCTCTTCAGCCCGATGC
CCGTTGTCCATCTACTCCCTGAGCAAGACCGAGAGACGCCACAGACGGGG
ATCTACCGCTGCCCTGTCTACAAGATCTTGACAAGAACCGGGGTTCTCTC
AACCACGGGCCACAGCACCAACTTCGTTTTCTGGATAGAGATCCCGAGCA
ACAAGCCCAACACATTCAGGGCCAGCCTCGTGTCAGAGACAAACAAACAG
GTACAATATTGCGATCAGGATTACTGGATCAAGGCCGGAGCAGCGTGCTT
CTGCGCTCTGCGGTACTGA
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