mRNA_E_fasciculatus_S2_contig8047.16211.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R8_ECTSI) HSP 1 Score: 242 bits (617), Expect = 8.640e-76 Identity = 124/135 (91.85%), Postives = 128/135 (94.81%), Query Frame = 3
Query: 48 AIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLDFDEAVRRALAGEPPGRNP 452
A + +QLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYS EEL+SGSVKDKGSKI YLDKIIALVGICSG DIDVRPSKVVAGLEPEGTNALLTALGKCA+SADLDFDEAVRRALAGEPPGRNP
Sbjct: 5 ASFSNNQQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSDEELDSGSVKDKGSKIGYLDKIIALVGICSGRDIDVRPSKVVAGLEPEGTNALLTALGKCAKSADLDFDEAVRRALAGEPPGRNP 139
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: Microtubule-binding (protein MIP-T3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT93_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.840e-46 Identity = 87/138 (63.04%), Postives = 104/138 (75.36%), Query Frame = 3
Query: 27 MGDDLASAIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLDFDEAVRRALAGEPP 440
M LA IAATQ +LG + KP+L+EKLLSK PFRFLHDVISAVTA+TGF GLYSG+EL+SG VK+KG K+AYLDK +A VG C G +D+R +KVVAGLEPE TNA L AL + A + LD++ AV R L GE P
Sbjct: 1 MEGQLAELIAATQAELGAVISKPKLTEKLLSKPPFRFLHDVISAVTAATGFGTGLYSGDELDSGLVKEKGPKMAYLDKAVACVGFCQGTAVDIRSAKVVAGLEPENTNAFLLALARVATNRQLDWEGAVNRVLRGEVP 138
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: Uncharacterized (protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PB63_PHYPN) HSP 1 Score: 156 bits (395), Expect = 5.690e-41 Identity = 81/137 (59.12%), Postives = 100/137 (72.99%), Query Frame = 3
Query: 27 MGDDLASAIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLDFDEAVRRALAGEP 437
MGD L + IA TQEQL L KP+L++KLL+K PFRFLHDV +AVT STGFA GLY+ EL S ++KDK K A+LDK+I VG C G DIDVR SK+VAGLEPE TN LL L + A+ LD+++A++ ALA P
Sbjct: 1 MGDSLETLIARTQEQLQPLITKPKLADKLLAKPPFRFLHDVFTAVTQSTGFAKGLYNDFELGSANLKDKPQKTAFLDKMIVCVGQCIGKDIDVRSSKIVAGLEPENTNILLQGLAQAAKDTSLDWNKAIQTALAKVP 137
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4C4_9STRA) HSP 1 Score: 153 bits (387), Expect = 8.390e-40 Identity = 80/137 (58.39%), Postives = 98/137 (71.53%), Query Frame = 3
Query: 27 MGDDLASAIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLDFDEAVRRALAGEP 437
MGD L + IA TQE L L KP+L+EKLLSK PFRFLHDV +AVT STGFA GLY+ EL S ++K+K K +YLDK+I VG C G +IDVR SK+VAGLE E TN LL ++ +CA LD+ +AV+ ALA P
Sbjct: 1 MGDSLEALIARTQEVLQPLIAKPKLAEKLLSKPPFRFLHDVFTAVTQSTGFAKGLYNDFELASANLKEKAQKTSYLDKMIVCVGQCLGKEIDVRSSKIVAGLEAENTNLLLQSIAQCASDTSLDWSKAVQTALAKVP 137
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: TRAF3-interacting (protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDG7_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.430e-39 Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 3
Query: 27 MGDDLASAIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLDFDEAVRRALAGEP 437
MGD L + I TQEQL L KP+L++KLL+K PFRFLHD+ +AVT +TGFA GLY+ EL S ++KDK K A+LDK++ VG C G D+DVR SK+VAGLEPE TN LL L + A+ LD+D+AV+ AL+ P
Sbjct: 1 MGDSLETLITRTQEQLQPLIAKPKLADKLLAKPPFRFLHDIFTAVTQTTGFAKGLYNDFELGSANLKDKPQKTAFLDKMVVCVGQCLGKDVDVRSSKIVAGLEPENTNLLLQGLAQAAKDKSLDWDKAVQVALSKVP 137
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9K6_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.790e-39 Identity = 77/141 (54.61%), Postives = 98/141 (69.50%), Query Frame = 3
Query: 24 TMGDDLASAIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLD-FDEAVRRALAGEPPG 443
+M + +A TQE +GG+ KP + EKLL+K PFRF+HDV+SAVT +TGFAAGLY GEEL+ +KDKG+KIAYL+KII LVG+ +D +P+K+VAGLEPE TN L L A S D + V RA+AGE PG
Sbjct: 259 SMIEQCTGDMAVTQELMGGVISKPAMKEKLLTKPPFRFVHDVVSAVTETTGFAAGLYEGEELDGKGMKDKGAKIAYLEKIIKLVGVVLNTLVDTKPAKIVAGLEPENTNKWLQNLAAAATSVDAGKSSDCVARAIAGEEPG 399
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3Z8_PHYRM) HSP 1 Score: 152 bits (385), Expect = 2.340e-39 Identity = 81/137 (59.12%), Postives = 99/137 (72.26%), Query Frame = 3
Query: 27 MGDDLASAIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLDFDEAVRRALAGEP 437
MGD L + IA TQEQL L KP+L++KLL+K PFRFLHDV +AVT STGFA GLY+ EL S ++KDK K A+LDK+I VG G D+DVR SK+VAGLEPE TN LL AL + A+ LD+ +AV+ ALA P
Sbjct: 1 MGDSLETLIARTQEQLQPLIAKPKLADKLLAKPPFRFLHDVFTAVTQSTGFAQGLYNDLELASANLKDKPQKTAFLDKMIVCVGQSLGIDVDVRSSKIVAGLEPENTNLLLQALAQAAKDKSLDWPKAVQAALAKVP 137
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFX9_HETAK) HSP 1 Score: 139 bits (350), Expect = 3.200e-39 Identity = 70/119 (58.82%), Postives = 83/119 (69.75%), Query Frame = 3
Query: 69 QLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLDFDEAVRRAL 425
+LGG+F KP+LSEKLLSK PFRF+HD IS TA TGF GL+ G EL+ +KDKG KIAYL+K I + G IDVR SK+VAGLEPE TN LL ALG+CA+ D+ AV L
Sbjct: 1 KLGGIFPKPKLSEKLLSKPPFRFIHDCISNTTAETGFLEGLFEGAELDGKGMKDKGDKIAYLEKAITAICHAKGESIDVRASKIVAGLEPENTNLLLAALGECAKDKSRDWAGAVAAGL 119
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2K7_9STRA) HSP 1 Score: 151 bits (381), Expect = 5.440e-39 Identity = 80/151 (52.98%), Postives = 103/151 (68.21%), Query Frame = 3
Query: 27 MGDDLASAIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLDFDEAVRRALAGEPPGRNPPPLRADGAP 479
MGD + + I TQE L L KP+L++KLL K PFRFLHD+ +A+T +TGFA GLY+ EL+S ++K+K KI YLDK++ VG C G DIDVRP+K+VAGLEPE TN L AL + A + LD+ AV++ LA P L ADGAP
Sbjct: 1 MGDSIEALIPKTQELLQPLIAKPKLADKLLLKPPFRFLHDIFAALTQATGFAKGLYNDFELDSANMKEKNQKITYLDKMVVCVGQCLGRDIDVRPAKIVAGLEPENTNLFLQALAQAASNKSLDWAGAVQKTLAKIPS------LTADGAP 145
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RGC7_9STRA) HSP 1 Score: 149 bits (375), Expect = 3.430e-38 Identity = 75/137 (54.74%), Postives = 98/137 (71.53%), Query Frame = 3
Query: 27 MGDDLASAIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGFAAGLYSGEELESGSVKDKGSKIAYLDKIIALVGICSGHDIDVRPSKVVAGLEPEGTNALLTALGKCARSADLDFDEAVRRALAGEP 437
MGD L + IA TQEQL L KP+L++KLL+K PFRFLHDV +A+ STGF+ GLY+ EL S ++KDK K A+LDK+I VG C+G D+DVR +K+VAGLEPE TN LL + + A+ L + +AV+ ALA P
Sbjct: 1 MGDSLETLIARTQEQLQPLIAKPKLADKLLAKPPFRFLHDVFTAIAQSTGFSQGLYNDFELASANLKDKTQKTAFLDKMIVCVGQCTGKDVDVRSAKIVAGLEPENTNLLLQGIAQAAKDKSLGWGKAVQAALAKVP 137 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8047.16211.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8047.16211.1 >prot_E_fasciculatus_S2_contig8047.16211.1 ID=prot_E_fasciculatus_S2_contig8047.16211.1|Name=mRNA_E_fasciculatus_S2_contig8047.16211.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=184bp MGDDLASAIAATQEQLGGLFQKPRLSEKLLSKAPFRFLHDVISAVTASTGback to top mRNA from alignment at E_fasciculatus_S2_contig8047:3959..6973+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8047.16211.1 ID=mRNA_E_fasciculatus_S2_contig8047.16211.1|Name=mRNA_E_fasciculatus_S2_contig8047.16211.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3015bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8047:3959..6973+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8047:3959..6973+ >mRNA_E_fasciculatus_S2_contig8047.16211.1 ID=mRNA_E_fasciculatus_S2_contig8047.16211.1|Name=mRNA_E_fasciculatus_S2_contig8047.16211.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=552bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8047:3959..6973+ (Ectocarpus fasciculatus EfasUO2)back to top |