mRNA_E_fasciculatus_S2_contig802.16188.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: LMWPc (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L511_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 1.090e-154 Identity = 228/258 (88.37%), Postives = 233/258 (90.31%), Query Frame = 1
Query: 1 MVQVVAPGRALTRFLGLVALASRFCSAFVAP--GGPAPLGASLRRSTSTFARAAATASIPPVNAEKRSTSLMMAGEGGKTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHWGKGQEATSKLRTMTSYCRSSGDVKSVPDPYYGGPQ------GFETVLDLLDDACQGLLEKCRAGEA 750
MVQ V PGRALT F+ L ALASRFCSAFVAP GGPAPL ASLR S ARAAATASIPPVNA KR TSL+MAGEGGKTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKF+IDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAA KRGV+LSGASRPLTPGDFDKFDLVVGMD ANTKAMSTAAEHWGK QEA SKLRT+TSYCRSSGDVKSVPDPYYGGPQ GFETVLDLLDDACQGLLEKCRAGEA
Sbjct: 1 MVQAVEPGRALTSFIVLSALASRFCSAFVAPRLGGPAPLRASLRWSIPRVARAAATASIPPVNAGKRPTSLVMAGEGGKTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFEIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAAKRGVMLSGASRPLTPGDFDKFDLVVGMDEANTKAMSTAAEHWGKSQEAISKLRTITSYCRSSGDVKSVPDPYYGGPQVGKSAGGFETVLDLLDDACQGLLEKCRAGEA 258
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB6_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.160e-72 Identity = 108/170 (63.53%), Postives = 130/170 (76.47%), Query Frame = 1
Query: 220 EGGKTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHWGKGQEATSKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLE 729
E GKT+V+FVCLGNICRSPTAEAVF + AG D+F I+SCGTGGG+ WY + G SYH G+SPD RMTAAA RG+ L GASRPLTP D D FD ++ MD +N +A++ AA +WGK +A K + MTSYC+ D+KSVPDPYYGG QGFETVLD+L+DAC GLLE
Sbjct: 56 EIGKTKVIFVCLGNICRSPTAEAVFDKKVQDAGRQDQFFIESCGTGGGSADWYMQSGFSYHEGESPDRRMTAAASNRGITLCGASRPLTPEDLDIFDYIIAMDGSNKQAITEAASYWGKSAQAAQKTKMMTSYCKKF-DMKSVPDPYYGGAQGFETVLDILEDACTGLLE 224
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: Phosphotyrosine (protein phosphatase I superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG2_9STRA) HSP 1 Score: 224 bits (572), Expect = 8.720e-71 Identity = 108/172 (62.79%), Postives = 128/172 (74.42%), Query Frame = 1
Query: 235 RVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHWGKGQEATSKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEKCRAGEA 750
+VLFVCLGNICRSP+AEAVF+ V KA AD F IDSCGTGGG WY++GG SYH GD DARMT AA +RGV L+ SRP+ P D D+FDL++GMD AN +A+ AA +WGK + A +KLR MTSYC +VPDPYYGGP+GFE VLDLL+DAC+GLL AG A
Sbjct: 34 KVLFVCLGNICRSPSAEAVFRSVVEKAEKADNFVIDSCGTGGGMRGWYRDGGRSYHEGDPADARMTEAAAQRGVHLTSISRPMRPSDLDEFDLIIGMDGANKQAVIEAAHYWGKKELAEAKLRNMTSYCTKHKSA-TVPDPYYGGPEGFEKVLDLLEDACEGLLLSIDAGTA 204
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: Tyrosine (phosphatase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHL2_9CHLO) HSP 1 Score: 222 bits (566), Expect = 6.010e-70 Identity = 111/186 (59.68%), Postives = 127/186 (68.28%), Query Frame = 1
Query: 214 AGEGGKTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHWGKG--------QEATSKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEKCRAGE 747
A + G+T VLFVCLGNICRSPTAEA+F+ V + G A FDIDSCGTGGG WYK GG SYH GD D RMTAAA RGV L+ SRPL P DF +F +VGMD AN +A+ TAA+ W +EA ++ MTSYC + V VPDPYYGGPQGFETVLDLLDDAC GLL +A E
Sbjct: 10 AEQAGRTGVLFVCLGNICRSPTAEAMFRAVVEREGVAGAFDIDSCGTGGGASGWYKPGGFSYHEGDPADPRMTAAAAGRGVRLTSRSRPLAPADFGRFKYIVGMDGANVRAILTAADFWAANGSADVPPAEEARGQVSLMTSYCTETEGVTEVPDPYYGGPQGFETVLDLLDDACTGLLRHIQAEE 195
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: LMWPc (domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WI06_9CHLO) HSP 1 Score: 221 bits (563), Expect = 2.790e-69 Identity = 111/175 (63.43%), Postives = 125/175 (71.43%), Query Frame = 1
Query: 238 VLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHW-------GKGQEATS-KLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEKCR 738
VLFVCLGNICRSPTAEAVFK V +AG AD FDIDSCGTGGGNP W+ EGG SYH GD D+RMT A KRGV+L+ SRPL P DF +FD +VGMDA N +A+ TAA++W K EA +L MTSYC VPDPYYGGP GFE VLDLLDDAC+GLL + R
Sbjct: 35 VLFVCLGNICRSPTAEAVFKAVVQRAGLADAFDIDSCGTGGGNPDWFTEGGWSYHEGDPADSRMTLTARKRGVLLTSRSRPLAPLDFSRFDYIVGMDAKNIRAIRTAADYWRVRPMGADKVPEAYGQRLSLMTSYCTKFKGEPEVPDPYYGGPAGFERVLDLLDDACEGLLTQIR 209
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: LMWPc (domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835VZ39_CHLIN) HSP 1 Score: 219 bits (558), Expect = 1.500e-68 Identity = 108/178 (60.67%), Postives = 125/178 (70.22%), Query Frame = 1
Query: 229 KTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHWGKG--------QEATSKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEKCR 738
K VLFVCLGNICRSPTAEAVFK V +AG A+ FDIDSCGTGGGNP W+ EGG SYH GD+ D+RMT A KRGV+L+ SRPL P DF +FD +VGMDA N +A+ TAA++W Q +L MT+YC VPDPYYGGP GFE VLDLLDDAC+GLL + R
Sbjct: 30 KIGVLFVCLGNICRSPTAEAVFKAVVQRAGLAEAFDIDSCGTGGGNPDWFTEGGWSYHEGDAADSRMTLTARKRGVLLTSRSRPLAPLDFGRFDYIVGMDAKNIRAIRTAADYWRVRPMGADTVPQSYGERLSLMTAYCSKFKGEPEVPDPYYGGPAGFERVLDLLDDACEGLLAQIR 207
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: LMWPc (domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X013_9CHLO) HSP 1 Score: 218 bits (555), Expect = 2.840e-67 Identity = 104/175 (59.43%), Postives = 124/175 (70.86%), Query Frame = 1
Query: 229 KTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHW--------GKGQEATSKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLE 729
K RV+FVCLGNICRSPTAEAVF+ V + G + FDIDSCGTGGGNP WY GG SYH GD PD RMT+AA+KRG++L+ SRPLTP D +FDL++GMDA N A+ A +W + + SK MT YCR+ V VPDPYYGGP+GFE VLDLL DAC+GLL+
Sbjct: 83 KLRVIFVCLGNICRSPTAEAVFRAVVERRGVSHLFDIDSCGTGGGNPDWYCRGGWSYHEGDEPDRRMTSAAQKRGIVLTSRSRPLTPMDVTRFDLIIGMDAKNQYAVKEATSYWLSEGMIESSEAEVLRSKNSLMTDYCRTYKGVTEVPDPYYGGPEGFERVLDLLYDACEGLLD 257
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: LMWPc (domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GHR6_9CHLO) HSP 1 Score: 216 bits (551), Expect = 7.880e-67 Identity = 110/191 (57.59%), Postives = 130/191 (68.06%), Query Frame = 1
Query: 196 STSLMMAGEGG--KTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHW-----GKGQ---EATSKLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEKCR 738
+ S A E G K VLFVCLGNICRSPTAEAVF+ V KAG FDIDSCGTGGGNP W+ EGG SYH GD D+RMT A KRGV+L+ SRPL P D +FD +VGMD N +A+ TAA++W G+G+ + + ++ MTSYCR VPDPYYGG GFE VLDLL+DAC+GLLE R
Sbjct: 65 TVSAAAASESGNRKAGVLFVCLGNICRSPTAEAVFRSVVEKAGLTAAFDIDSCGTGGGNPDWFTEGGWSYHEGDPADSRMTMTARKRGVLLTSRSRPLQPLDLSRFDYIVGMDPKNLRAIKTAADYWLVRPMGEGKVPPDYSRRVVLMTSYCRKFTGAPEVPDPYYGGAAGFERVLDLLEDACEGLLESIR 255
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: Protein-tyrosine (phosphatase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5H5_9CHLO) HSP 1 Score: 216 bits (551), Expect = 8.920e-67 Identity = 105/179 (58.66%), Postives = 126/179 (70.39%), Query Frame = 1
Query: 229 KTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHWG-KGQEATS----KLRTMTSYCRSSGDVKSVPDPYYGGPQGFETVLDLLDDACQGLLEKCRAGEA 750
KT VLFVCLGNICRSPTAEAV V +AG +F +DSCGTGGGNP+WYKEGG SYH G+ D RMT A +RGV L+ SRPL P D ++FD ++GMD++N ++ AA++W KG + KL+TMTSYCR VPDPYYGG QGFE VLDLLDDAC GLL+ C E+
Sbjct: 83 KTSVLFVCLGNICRSPTAEAVLTAVVKEAGLESRFVVDSCGTGGGNPNWYKEGGWSYHEGEDADPRMTEVAARRGVHLTSKSRPLKPDDLNRFDYIIGMDSSNMASIQVAADYWASKGYDIPKNYRGKLKTMTSYCRKHKGETEVPDPYYGGTQGFERVLDLLDDACSGLLQDCMQMES 261
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Match: Tyrosine (phosphatase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VF53_9CHLO) HSP 1 Score: 212 bits (540), Expect = 4.160e-66 Identity = 111/182 (60.99%), Postives = 129/182 (70.88%), Query Frame = 1
Query: 211 MAGEGG-KTRVLFVCLGNICRSPTAEAVFKQVTSKAGDADKFDIDSCGTGGGNPSWYKEGGESYHTGDSPDARMTAAAEKRGVILSGASRPLTPGDFDKFDLVVGMDAANTKAMSTAAEHW-GKG------QEATSKLRTMTSYCRSSGDVK--SVPDPYYGGPQGFETVLDLLDDACQGLL 726
MAG+ G KT+VLFVCLGNICRSP+AEAVFK V KAG + +F+IDSCGTGGG+ +WY GG SYH GD D RMTA A RGV L+ SRPL P D ++FD +VGMDAAN A+ AAEHW G G + SKL MT + RS K VPDPYYGG +GF+ VLDLLDDAC+GLL
Sbjct: 1 MAGDNGEKTKVLFVCLGNICRSPSAEAVFKDVVEKAGVSGQFEIDSCGTGGGSSNWYLPGGFSYHEGDPADGRMTATARTRGVTLTSRSRPLRPSDLEEFDYIVGMDAANLAAIRRAAEHWRGAGGGGAVPPDYGSKLSLMTDFLRSQQFAKFNEVPDPYYGGQKGFDLVLDLLDDACKGLL 182 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig802.16188.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig802.16188.1 >prot_E_fasciculatus_S2_contig802.16188.1 ID=prot_E_fasciculatus_S2_contig802.16188.1|Name=mRNA_E_fasciculatus_S2_contig802.16188.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=251bp MVQVVAPGRALTRFLGLVALASRFCSAFVAPGGPAPLGASLRRSTSTFARback to top mRNA from alignment at E_fasciculatus_S2_contig802:23305..27038- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig802.16188.1 ID=mRNA_E_fasciculatus_S2_contig802.16188.1|Name=mRNA_E_fasciculatus_S2_contig802.16188.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3734bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig802:23305..27038- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig802:23305..27038- >mRNA_E_fasciculatus_S2_contig802.16188.1 ID=mRNA_E_fasciculatus_S2_contig802.16188.1|Name=mRNA_E_fasciculatus_S2_contig802.16188.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=753bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig802:23305..27038- (Ectocarpus fasciculatus EfasUO2)back to top |