mRNA_E_fasciculatus_S2_contig8010.16180.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8010.16180.1
Unique NamemRNA_E_fasciculatus_S2_contig8010.16180.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ85_ECTSI)

HSP 1 Score: 504 bits (1298), Expect = 8.540e-169
Identity = 252/270 (93.33%), Postives = 261/270 (96.67%), Query Frame = 3 
Query:    3 WINTYFPATRFIDRQDEMFVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSGYFPTVRHQGKVMDFIEQNNELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTELARLEATDAAEGGAAAADTTQTG 812
            WIN YFPATRFIDRQDEMFVPLTS SDPNYEHRRTY+EE VK+GV EEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFG+DIPADIVEHSSKTANTIGDAL+SGYFPT+RHQGKVMDFIEQNNELH+GCPVADFSHHIGAAAQLLTPSCQFL+KEKDRSRAILDIFTQ  DMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAA+TKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTELARLEA DAAEG AAA DT+QTG
Sbjct:   63 WINAYFPATRFIDRQDEMFVPLTSTSDPNYEHRRTYVEEMVKDGVAEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGQDIPADIVEHSSKTANTIGDALSSGYFPTLRHQGKVMDFIEQNNELHQGCPVADFSHHIGAAAQLLTPSCQFLYKEKDRSRAILDIFTQ-GDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAAETKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTELARLEAADAAEG-AAATDTSQTG 330
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: hypothetical (protein n=1 Tax=Calothrix membranacea TaxID=212352 RepID=UPI0016862D4D)

HSP 1 Score: 166 bits (420), Expect = 4.360e-42
Identity = 100/251 (39.84%), Postives = 140/251 (55.78%), Query Frame = 3 
Query:    3 WINTYFPATRFIDRQDEM-FVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSG-YFPTVRHQGKVMDFIEQNNELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDR-SRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 746
            W+  YF +T+F D+Q ++ F P  S+++P Y  RR Y+EE+V    ++EDVKKIA L+ T A  + L  A+V  VNRRFFG+DIPA+I   +  T     +A+    Y    + Q K+MD+ E +  L +G  + D  H+IG   Q    S   L K KD   + I  IFT  +  P     PRIA+K ST  G+L  P     T+ +  I +AAA T+D  FTFG G  +R+C F+  F + M DLQ EL
Sbjct:   52 WVKLYFSSTKFHDQQRDLWFCPFESSTNPTYHPRRAYLEEKVAISYQQEDVKKIADLLRTDASDEVLADAMVQIVNRRFFGQDIPAEISHTAKYTVQKFTEAILPWKYIKGQKSQEKIMDYCEHS--LPQGVHILDVGHNIGEVVQATAGS---LKKLKDNIDQPIEQIFTTYAPTPQV---PRIAVKSSTFNGMLSSPTTPGKTVLLFMIGKAAAKTRDLAFTFGTGSSERECVFKDFFLQFMTDLQQEL 294
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cyanobacteria bacterium UBA11162 TaxID=2055781 RepID=A0A355DRG2_9CYAN)

HSP 1 Score: 165 bits (418), Expect = 8.310e-42
Identity = 99/250 (39.60%), Postives = 135/250 (54.00%), Query Frame = 3 
Query:    3 WINTYFPATRFID-RQDEMFVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSGYFPTVRH-QGKVMDFIEQNNELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 746
            W+  YF AT+F D  +D  F PL SAS+P Y  RR Y+EE+V     +EDVK+IA L+ T A  + L   +V  VNRRFFGK+IP  I + S+ T N   DA+    +   R  Q ++M++ E +  L +   + D  H+IG   Q    S + L    D+   + +IFT  +  P     PRIAIK S   GLL  P     T+ I N+ +AAA T+D  F+FG+G   R C F+  F   M DLQ EL
Sbjct:   54 WVKFYFRATKFHDDERDLWFCPLESASNPTYRPRRAYLEEKVAESYSQEDVKRIAELLKTNASDEVLTHEMVQVVNRRFFGKEIPLSITKASNDTLNNFIDAIFPWKYKRAREAQKEIMNYCEHH--LAKNVHILDIGHNIGEVVQATAGSLKILKDNLDKP--VEEIFTTHAPTPQV---PRIAIKSSNFDGLLSSPTTPGKTVLIFNVGKAAAKTRDLFFSFGSGSPDRACVFKDFFIAFMTDLQKEL 296
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: hypothetical (protein n=1 Tax=Nostoc sp. B(2019) TaxID=2690446 RepID=UPI00139143D8)

HSP 1 Score: 160 bits (404), Expect = 6.710e-40
Identity = 95/250 (38.00%), Postives = 135/250 (54.00%), Query Frame = 3 
Query:    3 WINTYFPATRFID-RQDEMFVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSG-YFPTVRHQGKVMDFIEQNNELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 746
            W+  YFPAT+F D  +D  F P  S++DP Y  R+TY+EE+V     +EDVKKIA L+   A  + L   +V  VNRRFFG+D+P +I + +  T     +A+    Y    + Q ++MD+ EQ   L  G  + D  H+IG   Q  + + + L +  D+   + +IFT  +  P     PRIAIK ST   +L  P     T+ +  I +AAA T D  FTFG G  +R C F+  F + M DLQ EL
Sbjct:   53 WVKFYFPATKFHDDERDLWFCPFESSADPTYYPRKTYLEEKVAISYTQEDVKKIAELLRINASDEVLAYEMVQVVNRRFFGEDVPTEITDTAKYTVQKFSEAIFPWKYIRGRKSQKQIMDYCEQR--LTPGVHILDVGHNIGEVVQATSSALKSLKENLDQP--VEEIFTTHAPTPQV---PRIAIKSSTFDNMLSSPTTPGKTVVLFMIGKAAAKTHDIFFTFGTGSSERACVFKDFFLRFMNDLQHEL 295
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: Uncharacterized (protein n=2 Tax=unclassified Okeania TaxID=2634635 RepID=A0A6L9ZSK1_9CYAN)

HSP 1 Score: 159 bits (401), Expect = 1.690e-39
Identity = 96/251 (38.25%), Postives = 138/251 (54.98%), Query Frame = 3 
Query:    3 WINTYFPATRFID-RQDEMFVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSG-YFPTVRHQGKVMDFIEQNNELHEGCPVADFSHH-IGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 746
            W   YF ATRF D ++D  F  L S S+P+YE RR Y+EE+V  G  E DVK+IA L++  A  + L   +V  VN RFF K+IP+ I + +  T  +IG+A+    Y    +   +V+D+  +N  L +   + D  HH IG   +  T + + L    D+S  + +IFT     P+T   PRIA+K+S   GLL  P     T+F+  I +AA +T+D  FTF  G  +R C F+  F + M DLQ EL
Sbjct:   52 WAKIYFRATRFHDSKRDLWFCALESTSNPSYEQRRAYLEEKVATGYSEADVKRIAELLNKNAEDEVLAYEMVQIVNHRFFEKEIPSTITKAAENTLQSIGEAILPWKYIAATKAHSQVIDYCAEN--LPDNVHIIDAGHHNIGEVVKTTTGALRTLKNNLDKS--VEEIFTSN---PLTPQAPRIAVKESNFDGLLSSPTIPGKTVFLFKIGKAAIETQDINFTFSTGSSERACVFKDFFLEFMKDLQQEL 295
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: Uncharacterized (protein n=10 Tax=Okeania TaxID=1458928 RepID=A0A846CFV2_9CYAN)

HSP 1 Score: 159 bits (401), Expect = 1.730e-39
Identity = 94/252 (37.30%), Postives = 139/252 (55.16%), Query Frame = 3 
Query:    3 WINTYFPATRFIDRQDEM-FVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSG-YFPTVRHQGKVMDFIEQN--NELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 746
            W   YF AT+F DR+ ++ F P  S S+P Y+ RR Y+EE+V     E DVK+IA L++     + L   +V  VN+RFF K+IP  I + +  T  ++G+A+    Y    + Q ++M++  +N  N++H    + D  H+IG   Q  T   + L    D+S  + +IFT     P+T   PRIA+K+S   GLL  P     T+FIL I +AA +T+D  FTF  G  +R C F+  F + M DLQ EL
Sbjct:   52 WAKIYFRATKFHDRERDLWFCPFESTSNPTYQQRRAYLEEKVAKSYSEADVKRIAELLNKNTEDEVLAYEMVQIVNQRFFEKEIPLPITKTAKNTVQSLGEAILPWKYIAGRKAQNQLMNYCAKNLPNDVH----ILDVGHNIGEVVQATTGGLRTLKNNLDKS--VEEIFTSN---PLTPQAPRIAVKESNFDGLLSSPTIPGKTVFILKIGKAAIETQDINFTFSTGSSERACVFKDFFLEFMKDLQQEL 294
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: Uncharacterized (protein n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A351L9G3_9CYAN)

HSP 1 Score: 158 bits (400), Expect = 2.300e-39
Identity = 96/256 (37.50%), Postives = 140/256 (54.69%), Query Frame = 3 
Query:    3 WINTYFPATRFID-RQDEMFVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSG-YFPTVRHQGKVMDFIEQNNELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDR-SRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTELARLEA 761
            W+  YF +T+F D ++D  F P  S ++P Y+ RR Y+EE+V     +EDVK IA L+   A  + L  A+V  VN+RFFG++IP  I + ++ T   I +A+    Y   ++ Q ++M + E +  L +   + D  H+IG   Q        L K KD   + + +IFT+    P+T   PRIAIK ST  G+L  P     T+ ++ I +AAA T D  FTFGAG  +R C F+  F   M DLQ EL R+ A
Sbjct:   54 WVKFYFRSTKFHDDKRDLWFCPFESTANPTYQPRRAYLEEKVATSYSQEDVKTIAELLINNASDEVLAHAMVQVVNQRFFGEEIPLHITKTANHTVQKITEAILPWKYMRGIKAQQEIMSYCEHH--LAKDVHILDVGHNIGEVVQATAGG---LRKLKDNLDKPVEEIFTEH---PLTPQAPRIAIKSSTFDGMLSSPTTPGKTVVLMQIGKAAAKTHDIFFTFGAGSSERACVFKDFFLAFMKDLQKELQRIAA 301
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: Uncharacterized (protein n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5YFH2_9CYAN)

HSP 1 Score: 157 bits (398), Expect = 4.030e-39
Identity = 99/253 (39.13%), Postives = 140/253 (55.34%), Query Frame = 3 
Query:    3 WINTYFPATRFID-RQDEMFVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSGYFPTVR--HQGKVMDFIEQN--NELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 746
            W+  Y  A+RF D R+D  F  L S S+P Y+ R  Y++E+V  G   +DVKKIA L+      + +   +V  VNRRFFGK+IP++I + +  T   I +A+    +   R  HQ +VMD+ EQN   ++H   P+    H+IG   +  T + Q L    D+   + +IFT     P+T+  PRIA + ST  GLL  PAK   T+FI  I +AA  T+D LFTF  G + R C F+  F + M DLQ EL
Sbjct:   54 WLRFYLRASRFHDDRRDLWFCALESKSNPTYQPRVNYLKEQVAKGYSSDDVKKIAQLLRNNDKDEVIAHEMVQIVNRRFFGKEIPSNITQAAKDTLQEISEAVQPQKYILARKSHQ-QVMDYCEQNLPKDVH---PIDAGHHNIGEIVKTTTRALQILKNNLDKP--VEEIFTAN---PLTLQAPRIATQASTFEGLLSSPAKPGKTVFIFKIGEAAIQTQDILFTFSTGSEDRVCVFKDFFLEFMTDLQQEL 297
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: Uncharacterized (protein n=3 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0K696_9CYAN)

HSP 1 Score: 158 bits (400), Expect = 5.030e-39
Identity = 92/250 (36.80%), Postives = 135/250 (54.00%), Query Frame = 3 
Query:    3 WINTYFPATRFIDRQDEM-FVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTS-GYFPTVRHQGKVMDFIEQNNELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 746
            W+  YF AT+F D Q ++ F P    S+P Y+ RRTY+EE+V  G  + DV++IA L++T A    L   +V  VNRRFF  +IP  I + +  T     +A+    Y   V+ Q K+M++ ++   L +G  + D  H+IG   Q    + + L  + +  + + +IFT     P+T   PRIA + S   GLL  P  A  T+ I  I +AAA+T D  FTFG G ++R C F+  F   M DLQ EL
Sbjct:   88 WVKIYFRATKFHDDQRDLWFCPFEPTSNPTYQSRRTYLEEKVAIGYSQADVRRIAQLLNTNADDQTLAHEMVQIVNRRFFESEIPLTITKSAKDTLQNFSEAILPWNYLRAVQSQQKIMNYCQRT--LPQGVHILDAGHNIGEVVQTTAGALRTL--KDNLEKPVAEIFTSH---PLTPQVPRIATRSSNFDGLLSYPTSAGQTVVIFKIGEAAAETHDISFTFGTGREERACVFQEFFMNFMNDLQQEL 330
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nostocaceae cyanobacterium TaxID=2723028 RepID=A0A838VME8_9NOST)

HSP 1 Score: 157 bits (396), Expect = 8.930e-39
Identity = 95/250 (38.00%), Postives = 135/250 (54.00%), Query Frame = 3 
Query:    3 WINTYFPATRFIDRQDEM-FVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELERAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSG-YFPTVRHQGKVMDFIEQNNELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIFTQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKDSLFTFGAGVDKRQCAFRFAFQKLMADLQTEL 746
            W+  YF AT+F DRQ ++ F P  S++DP Y  RR Y+E +V    + EDVKKIA L+ T A  + L +A+V  VNRRFF  DIP +I   +  T     +A+    Y    + Q ++M + E +  L +G  + D  H+IG   Q  + + + L    D+   I   FT+ +   +T   PRIAIK ST  G+L  P     T+ +  I +AAA T D  FTFG G  +R+C F+  F + M DLQ EL
Sbjct:   52 WVKFYFSATKFHDRQRDLWFCPFESSADPTYHPRREYLEAKVALSYQREDVKKIAELLRTNATDEVLAQAMVQVVNRRFFDADIPPEISHAAKNTIQKFTEAILPWKYIRAQKSQQQIMGYCEHS--LPQGVHILDVGHNIGEVVQTTSVALRRLKDHLDQP--IEQTFTEHA---LTPQVPRIAIKSSTFDGMLSSPTTPGKTVLLFMIGKAAAKTHDIAFTFGTGSSERECVFKDFFLQFMNDLQQEL 294
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8010.16180.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
Uncharacterized8.540e-16993.33protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ85... [more]
hypothetical4.360e-4239.84protein n=1 Tax=Calothrix membranacea TaxID=212352... [more]
Uncharacterized8.310e-4239.60protein n=1 Tax=Cyanobacteria bacterium UBA11162 T... [more]
hypothetical6.710e-4038.00protein n=1 Tax=Nostoc sp. B(2019) TaxID=2690446 R... [more]
Uncharacterized1.690e-3938.25protein n=2 Tax=unclassified Okeania TaxID=2634635... [more]
Uncharacterized1.730e-3937.30protein n=10 Tax=Okeania TaxID=1458928 RepID=A0A84... [more]
Uncharacterized2.300e-3937.50protein n=2 Tax=unclassified Cyanobacteria TaxID=1... [more]
Uncharacterized4.030e-3939.13protein n=1 Tax=Limnoraphis robusta CS-951 TaxID=1... [more]
Uncharacterized5.030e-3936.80protein n=3 Tax=unclassified Symploca TaxID=262043... [more]
Uncharacterized8.930e-3938.00protein n=1 Tax=Nostocaceae cyanobacterium TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8010contigE_fasciculatus_S2_contig8010:125..7050 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start1
Model size2873
Hectar predicted targeting categoryother localisation
Exons7
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-13_002700.1
Cds size762
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8010.16180.1prot_E_fasciculatus_S2_contig8010.16180.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8010 178..4992 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842463.5741324-UTR-E_fasciculatus_S2_contig8010:124..1771696842463.5741324-UTR-E_fasciculatus_S2_contig8010:124..177Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8010 125..177 +
1696842463.6808403-UTR-E_fasciculatus_S2_contig8010:4992..70501696842463.6808403-UTR-E_fasciculatus_S2_contig8010:4992..7050Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8010 4993..7050 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842463.586692-CDS-E_fasciculatus_S2_contig8010:177..2701696842463.586692-CDS-E_fasciculatus_S2_contig8010:177..270Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8010 178..270 +
1696842463.6042783-CDS-E_fasciculatus_S2_contig8010:842..9651696842463.6042783-CDS-E_fasciculatus_S2_contig8010:842..965Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8010 843..965 +
1696842463.6179738-CDS-E_fasciculatus_S2_contig8010:1470..16031696842463.6179738-CDS-E_fasciculatus_S2_contig8010:1470..1603Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8010 1471..1603 +
1696842463.629583-CDS-E_fasciculatus_S2_contig8010:2444..25511696842463.629583-CDS-E_fasciculatus_S2_contig8010:2444..2551Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8010 2445..2551 +
1696842463.640282-CDS-E_fasciculatus_S2_contig8010:2905..30011696842463.640282-CDS-E_fasciculatus_S2_contig8010:2905..3001Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8010 2906..3001 +
1696842463.655991-CDS-E_fasciculatus_S2_contig8010:3481..36131696842463.655991-CDS-E_fasciculatus_S2_contig8010:3481..3613Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8010 3482..3613 +
1696842463.667664-CDS-E_fasciculatus_S2_contig8010:4914..49921696842463.667664-CDS-E_fasciculatus_S2_contig8010:4914..4992Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8010 4915..4992 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8010.16180.1

>prot_E_fasciculatus_S2_contig8010.16180.1 ID=prot_E_fasciculatus_S2_contig8010.16180.1|Name=mRNA_E_fasciculatus_S2_contig8010.16180.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=254bp
MFVPLTSASDPNYEHRRTYIEERVKNGVEEEDVKKIAYLMHTGAPQDELE
RAVVNGVNRRFFGKDIPADIVEHSSKTANTIGDALTSGYFPTVRHQGKVM
DFIEQNNELHEGCPVADFSHHIGAAAQLLTPSCQFLHKEKDRSRAILDIF
TQQSDMPMTVATPRIAIKDSTLGGLLKKPAKAKWTMFILNIRQAAADTKD
SLFTFGAGVDKRQCAFRFAFQKLMADLQTELARLEATDAAEGGAAAADTT
QTG*
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mRNA from alignment at E_fasciculatus_S2_contig8010:125..7050+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8010.16180.1 ID=mRNA_E_fasciculatus_S2_contig8010.16180.1|Name=mRNA_E_fasciculatus_S2_contig8010.16180.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6926bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8010:125..7050+ (Ectocarpus fasciculatus EfasUO2)
GGTGGATAAACACCTACTTCCCGGCCACTCGGTTCATTGACCGGCAGGAC
GAAATGTTCGTTCCCCTTACCTCGGCCTCCGACCCCAACTACGAGCACCG
CCGCACCTACATCGAAGAGAGGGTCAAGAACGGCGTCGAAGAGGAGGTGC
GTACTTCCTGTTGTTGTGTTGTATCGTCTCGTGGGTGTTTTGTTTGTCCT
TGCTACAAGTCGAAGAGGAGTTTCGTATGCATTCGTACATATTCTACATC
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTTGTGTAATGCTCGCGCGC
GTTTCTCTCGTGCCTCGTGTGTCCCTTGGTATACGTCCGTCCGTCTCTTG
TCGTTGTTGTTCTGTTTCTTGCGGTGCATACGTGTGTGTTTCGTGTGTAT
TTCGTTTGCTTGGTTTGTCCCCCCGCTGTGATCATCGGGAAAAGATCGCG
CGCAACTTCTCCTCCTCCTCCTCCTCCTCCAGAACAATTATATACTATCT
CTCTTCCGCCCTCCCCCCCCTCCTGCGGTCTTTTGTCCCCCTGCATAAAC
TTGGCTGAGAAAAAACCGGCATACCATATCGCCCCGTCCCGGTATCTGTA
GGGATGAGAGGACCGTAAGGGTCTAACGACTGCAACGGCATGCGTTCACA
TGAGTACCGCCCCCCCCCACCGACGAGGACCTAAAATGCCGTTTTTTTAA
CTCCTCCGCCTCCGGCAGGACGTGAAGAAGATCGCGTACCTGATGCACAC
GGGGGCCCCGCAAGATGAACTGGAGAGGGCCGTGGTGAACGGCGTCAACC
GTCGCTTCTTCGGCAAGGATATACCCGCCGACATAGTCGAGGTATGTACA
TGTGAAGGTGTGAAGCGATGACGTCATCGAGGTATGTTGGTGTGCTCTAC
CTATATTGTATTGATTGTACAACACGCGCCGACGTGAGGGACAAGCTCCT
GCGAAAGATTTTTCCCGAACGTGTCCTTTCTAGTTTTCGATCGATCGATC
GATCGATCGTTGTTGTTGTTGTTGTTGTTGTGTCGTGAGGTTCATGCAGG
CAAGACCATGATGGAATTCGTCGTCGTTGTTGTCCGCGTTGTCGTTGTGG
CTGTTTTCGAGCAACACGCCGGCTAGACTAACCTTAACCCTATCCCTAAC
CCCGGTCCTAGTTCATGTCGTTGTCGATGTTTATGTCGTTGTTGCTGTTT
TCGATTGCAGTACGCCGGCAAGATTATTTTTATTTCATGTCGTTGTCATT
GTTCCTGTTGATTGATCGCTAACTCCGGCTAGACTATGCTTCGTGTCGTT
GTCGTTGTCGTTTTGTCGTCGTTGTTGCCGTTGTGTTCAATGGCAGCACT
CCAGCAAGACGGCAAACACGATCGGAGACGCGCTCACGTCCGGGTACTTC
CCGACCGTACGGCACCAGGGCAAGGTCATGGACTTCATCGAGCAGAACAA
CGAGCTGCACGAGGGCTGTCCCGTCGCGGGTACGTTGAGATCGTCATGGC
CGCGTTGGATGTAAACTACATAGCCGTGTATTTTCAAGGCCGTAACTTGT
AAACTAGAAGATCCTATACATTGCACAGGACAAGGATGACGTCATCGACG
TGTTTATGCAGATAGCATCACCCCCCCCCCCCCCCTTCCCCTCCCGACAA
TGCATCACGGGGACCTCGGACGTATTTATTATTATCCGACGTAGGGTGGC
AAAACAGATCCCCGTGTTAACGCGGGGAGTTCTTGTTTTTTCTACCTTGT
AACACAAGGGCTGTCCCATCGCGGACACGTTGATACGTCAAGGATGAGGA
TAATGTCATAGCCGTGTTGGATGGATGTACATCGATTCGTCGCACCCCTT
TTTTCGAAGCGCTCGAGTTACGAGTGTGAGATATGTATACTTCGCGCTTC
AAGAAAATATTTGTTGTCTAACGTCCGGGGTCCCCGTGCTGTGTTGTCCG
GGGTCCTCTTTCCTCGCTACCGATCCGATTTCTCCCACCGCATCGTACCT
GCCTGATAGGTCAACAGATTTCTACTCCCACACCAGGATGTTTGGTGCAG
TCGGATAACGATCTGCCTCCCTCTTGCGTTCCCGTGATTTGTTGTTGGAT
GGGTATGTAGGTGGGTGGTCATTCCTCGGTGCTTGCTACTGTACCACATC
AGGATGTTTCTCCTCCCCCACACATCAGGATGTTTGGTCGAGTCGGATAC
CAACGGCCCTCCGTGGTCCCCGTGACGCATCCTCGGTACTTGCTACAGTA
CCCCCCATGTATACTGCTGTATGGTTACAGATTTTCCCCTCCACATCGTA
CCCACGTGTTACGGTTACAGATTTCTCCCACCACATCGGGGCGGCGGCGC
AGCTGCTCACCCCATCTTGCCAGTTCCTCCACAAGGAGAAGGACCGCTCC
AGGGCCATCCTAGACATATTCACGCAGGTATGATAGGTGATCAATGTCTA
CTGAATGGGAACTAACTTGGCTTCAGGTTGATGGCGACCCGTCGTCCTTG
TTGTTTTTGTTGTAGTTGTTGTTAATACTGTTGCTGTTGTCGTTGTTGCT
GGCGGTGGTGGTGGTGTTGGATGGGGCACAACGATAAGATGGCAATGAGT
TCAGAGATATTTCGACCTAAATGGACTTGCATGATCCGTTGTATTTGTTT
TTGTTGCCCCCCTTTGGATGGAGTCGAACGACAAGTCGGCAATGAACTAA
TTCGTAAATTTGTTCTGGCATACATGCACTTACGGGCTTCGTTTGTTTTG
GTTTCTGTCGATCCCACCCACTCAATTTGAGCAGAGCGACATGCCCATGA
CCGTGGCCACCCCGCGTATCGCCATCAAGGACAGCACCCTCGGCGGCCTG
CTGAAAAAGCCTGCCAAGGCGAAATGGGTGAGTGCGGCGAGAGGGAGAGG
GGGGAGGGAGGGAGGAAGAGCACCGTGCTTTACAATCACGAAACACCTCT
CCGTACTGCTGGTGATACTTGCGTTTCCGTTTTTTTTTTCCCCAATAGCA
CGCTTTGGACTCGAACGTGTGTCATGCTGTTGGTGCTGTTGTTGTCGTTG
TCGTTGCCGATGTTGATGGCGTTGTTTTGGCCAATAGTGATGGCGCTGTT
GACGTTTATATCTATCTCCGAAACATGTCGGGCTTATCCTCTCAACATGC
GCATGACCTTCCTCGGCTGAGCCCCTTTGTTCCAGACAAGGCACGACACA
AATAATAGCGATAACTTGGTGTTGTTATCCCGAATAAATTCAAGACATGT
TTGGTTGGTCAGCCGGCTACTGCTGTGACCCGATCGATGCTAGTTCAACA
ACGAACGACACACACACACACGCACGCATGCACGCGCACGATGCTGTTCT
CCTGCAGACGATGTTCATCCTCAACATCAGGCAGGCCGCGGCCGACACGA
AGGACTCCCTGTTTACCTTCGGGGCCGGCGTGGACAAGAGGCAGTGCGCC
TTCCGCTTCGCCTTCCAGAAGCTCATGGCCGACCTGCAGGTGTGGCTAAC
TACTACAGCTCTGCTGTTCCTACCACGTATTTTCAGAACAGAAAACGGTA
CTGAATACACCGAGTGGACAAGCTGTCTAAGGTCTTGCTACGGGGTAGTG
TGTCTTTTTTTCTCGCAATTCGAAAACGTGCCATGCGTTGTTTGTGTATA
GAACACCTCGCAACAATCAAGGAAGCCAAAAGAAGTACAGACGACATACG
GGCGATCTGCACGTGGGCGGTACTGCTCTGCTGTACTTCAGTGAATTTAT
TGAATTTTCATAACGGATTTAGCACTACGCTGTTCGTTGGTTACAAGTAA
GTCTTGCAAGAGTCTCTGGTTCTTCCCACTTCAAAAACGTTTGTCATATG
TAAATAGCACCTCGAAAACTTCAACCAAGCCAAGCAGTGAGGGCGACACA
TGAGCGACCTACGGAGTGGGGGCTACATACATGCATACCGTAAGGGCCTA
CACTATGCACTCGGTAGTTTAAGAACTTGGTGCTCAACATCGTTCGAACG
TAATGATTTGAGAATGCTTCGTGAGCCCGAATTAAGACCCCCCCCAGAAA
CCTATATACGCAGCGGCTCTTGAGAATCTGCTCCGTATATGATGTGGAGA
TATGTACAGTGGGTGCGCTTAGTCAAGGGTAATATGTCGCCAAAGTCTGT
AAACCACGATTTCCTCTTTGGATACTGCACACGCACGCATAGCAAACGGA
TAAGGCGGGTCCCCGCAAGGTATATAAGGACACGAGCGTTGCCCGTTTTG
TGCCCCGTGCTGCGGGTAGAGGTTCCGTGAGGTGATGACGGCCTACAGTA
GCCCTAGAGTACCACCAGCACCAGCACCGTGACCTTGTGCTTCTCTTTTG
ATCCTCCGTTCTTCACAGTTAAATGAGCCTTCCCAGAAAGATGCTTCCGC
TCTTGGGACCTTTTCCGCTACGAGTCAGTAGAGGTTTCGGGTTGTGGAGG
CCTTCCGAGAGTAGCACCACCGCAACGTGATTCTCGGTGATATTTCGTAC
TCGACAAATACATAGTTGCATGTACAACCGCAGAGCCGGTAGTGTTCCCC
GTAAGAGGTTACCGCGAGGAACCCTTCTCGCAGTCAACGTCTTCACTGCT
TTTGCGGGAGTCGTTTCCCACCCCCCACCGCCGTCTGCCCACACGCGGCG
TCAATCACCAACCGGCTGTACTCAATACCCTTACCCCCCCTGTCCGTTCG
TGTTTTCCTCGTCGTCGTTTTTTCTTGTTTCGTTTTTTCGTGTGCGGTGA
TGATTCTTACCACCCCACCCCGTACAAAACAAAACAAAAGACGGAGCTGG
CTAGGCTTGAGGCTACAGACGCCGCGGAAGGTGGTGCTGCTGCTGCCGAC
ACCACCCAGACGGGGTAATTATATTAAACACCCCGGCAACACATCAAGGA
GAGTAGACGAAAAGGGTGCTCCTGACCTCTTTTGAGTTGTTATTCGTTTT
TCTGGTGGTGGTATAGTCTTAATTGTGATGACGTGTACTGACTTCGTAGC
GGAAATCGCTGCTGCTGCTGCCGATGCCGCCCAGACGGGCATGTAAATTA
AAGAAAAAAATCCGGCGACACTGCAAGGAGAGTAGATGCTAGACTAGTAC
TGTAGTTCTCCTTCTTACCTTTTTTCGTTTTTTTTTCGTTTTTCTGCTGC
TGCCGACACCGCCCGAAGTGATTAAATTATATACCCCGGTAAATACCAAC
AAGGAAGGAGAGTAGTAGATGATATTTGTAGCAGTGCTCTCTTTCTGGCC
TCGTTTCATTGTTGTTTGTTCTCCTGGTGGTATATAGTCCAAGCGTTGTG
GACTTGTTCCTGTGGTGGCACTCACCGCCTAGGTTCCGTTCTCGGCATGT
TTCATTCACGAGGTTGGTCGAGATCGCGATCGATAGGAGGCTTTCCGGTG
CGCGCGCGCAGGTGGGCCGGGCGAATGCCTCACTATTGATGTATCGATCC
GGCGTCCACTATCCCATCATCTCTCTCTCCCTTCGACGTTTGGGAAGAGA
CGGGTAAGGACGTGTGTTGTTTTTGCCATTGTGCGGCAGCCCTGCCGAGG
GCGGGACGTTTTTTTTCTCGCGGCCCGGAAAAACAATGCATGTGGTTGTC
GCAATCGATCCGGATCGTCGGGGAAAGGTCTCACCCACTATATCGTGTTA
TCGTATTTTTTGGAGGCAGCTCCAAGGTGATCGTATTGAAGAGGTGCGAA
TAAACACCTGTGTGTTCGACACTCCCGTCTCCTTAGGAGCAGGGTGCTTT
TTGTTGCCATCACGCTGCAACCTTCACCGGTCCTTCGGAGTCTCGTGCAC
AGCCTCAGTTAGAGGGTCCATATCCTTTTTTCTTTTTTTGCGGGGTCATC
ATGCATGCCGTAGCCTTGCAGAGGGGGGCATTGCTGTTCTGTATCACAGA
AAGCTTTTCTTGCAGTGGCTTGGGTAAAGTCCTCGTGGTTTGTCACGCTC
GTTGTTCAGGGGGGGAGGGTAGTTGACCGGTGTTGGGGCGGGACCTACCA
GTACAGGCGTAGACGTCCCTTTGGGAAGCTGACGCGTTCGAGCCGCCCAC
TCTGATCAAATATAATAAAATTAGCCCTACCTGTATTGTTCTGGTTGTAA
CAGCCAGCTCTCCTCGTCTTGCCTGCCCGCGGGGCGTGTCCTTGTTTTCG
TGACGGTCGCACACACGCACAGGGGGTTGAATTGAGTCGCGCGTCGCTGT
TCTTTTTCCGGCACGCTGCTCCTGCAACAGCCAACGGTCGGGTATTGTGA
TACAGTAGTTACGGGGTATATAACGGCCAGTTTAGCGGCGGGACCATAAT
TAATTGCGGAAGGGTCCTCTGTCGAGACATTGTTGTTGTTGTCTTGACAT
TAAAAACATTGGACTAGTCAATTAGATTTGCCCGAAAAGTTGGAAGATTC
TGAAGCCTCTAGGCTGAAGCCTCTGTTCCCGAAATTCTCGGACCTTATTT
CAAAAGTGACCCCACTTTTTCGAGTTTTTTCTGACCCCACTTTTTCTGAC
CCCACTCTCCAGTTTTCTCTTGGTTTTAGAGTAGGCGATCTCCGGTCCCT
TCTCTAAAAGCAAGTCGTTTTTCTTTGGTCGATGTTTCTCGAGATTCCTC
TTACAGATTTTCCTGTGTTGGAAGAGGTGTTCCCCCTGGCCCCGTCCGCC
CCTCCTGCAAGTTTGGTGCAAAGCTTGTGTCAGTTCTCGAGTACGCGTCC
GTTGTTAGATGTCTTATTCGTAGATCTCCTCCCTGCGCGCACCCTCCACA
GCAACCAGTCCCGCGCAACATGCAGGGCATGACTCATCGTGCATCGCATC
ATGGCACACTCCAGACTTGTGCACCAGCAGGGTGCGCTCCTACATGCCCA
CCCGACCGAGACCAATGCGTGAGCAGTGCTCGCCAGGTAGGCAGCGTTGC
AACCACGCTCTAAAACACGCAGCAAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8010:125..7050+

>mRNA_E_fasciculatus_S2_contig8010.16180.1 ID=mRNA_E_fasciculatus_S2_contig8010.16180.1|Name=mRNA_E_fasciculatus_S2_contig8010.16180.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=762bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8010:125..7050+ (Ectocarpus fasciculatus EfasUO2)
ATGTTCGTTCCCCTTACCTCGGCCTCCGACCCCAACTACGAGCACCGCCG
CACCTACATCGAAGAGAGGGTCAAGAACGGCGTCGAAGAGGAGGACGTGA
AGAAGATCGCGTACCTGATGCACACGGGGGCCCCGCAAGATGAACTGGAG
AGGGCCGTGGTGAACGGCGTCAACCGTCGCTTCTTCGGCAAGGATATACC
CGCCGACATAGTCGAGCACTCCAGCAAGACGGCAAACACGATCGGAGACG
CGCTCACGTCCGGGTACTTCCCGACCGTACGGCACCAGGGCAAGGTCATG
GACTTCATCGAGCAGAACAACGAGCTGCACGAGGGCTGTCCCGTCGCGGA
TTTCTCCCACCACATCGGGGCGGCGGCGCAGCTGCTCACCCCATCTTGCC
AGTTCCTCCACAAGGAGAAGGACCGCTCCAGGGCCATCCTAGACATATTC
ACGCAGCAGAGCGACATGCCCATGACCGTGGCCACCCCGCGTATCGCCAT
CAAGGACAGCACCCTCGGCGGCCTGCTGAAAAAGCCTGCCAAGGCGAAAT
GGACGATGTTCATCCTCAACATCAGGCAGGCCGCGGCCGACACGAAGGAC
TCCCTGTTTACCTTCGGGGCCGGCGTGGACAAGAGGCAGTGCGCCTTCCG
CTTCGCCTTCCAGAAGCTCATGGCCGACCTGCAGACGGAGCTGGCTAGGC
TTGAGGCTACAGACGCCGCGGAAGGTGGTGCTGCTGCTGCCGACACCACC
CAGACGGGGTAA
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