mRNA_E_fasciculatus_S2_contig800.16170.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: RTP1_C1 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX3_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.170e-66 Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = 1
Query: 22 AEVNEKPPSL--LESKERYHFRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAIRG 411
A+VN+KP S LESKERYHFRASCLSNLAEVCQLLRWSLGR+S D+VDLAAGVLS ETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLG LDAAIRG
Sbjct: 1338 AQVNQKPSSSSSLESKERYHFRASCLSNLAEVCQLLRWSLGRFSCDVVDLAAGVLSTETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGCLDAAIRG 1469
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: RTP1_C1 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL2_9PHAE) HSP 1 Score: 219 bits (559), Expect = 1.070e-63 Identity = 113/122 (92.62%), Postives = 118/122 (96.72%), Query Frame = 1
Query: 46 SLLESKERYHFRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAIRG 411
S LESKER HFRASCLSNLAEVCQLLRWSLGR+S+D+VDLAAGVLS ETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELR+AYRALKRAA SDRDE+TRSHARNGLGYLDAAIRG
Sbjct: 1301 SSLESKERCHFRASCLSNLAEVCQLLRWSLGRFSYDVVDLAAGVLSTETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRLAYRALKRAAGSDRDEITRSHARNGLGYLDAAIRG 1422
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: RTP1_C1 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW23_9STRA) HSP 1 Score: 120 bits (301), Expect = 5.860e-29 Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 52 LESKERYHFRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAI 405
+E++ER HFRASCLSNLAEVC LLRWSL Y+ D+VDLA G L++ETG EE+T RR +++LL R+L G G D ++P ++ YRAL+ A + D V R HA+ GL +DA +
Sbjct: 961 VETRERIHFRASCLSNLAEVCALLRWSLRPYARDVVDLALGALTLETGAGEEATHVRRASAYLLSRILAGTGSDAATIMPDL-IKPVYRALRIVASTVSDGVARFHAKAGLAEIDAIM 1077
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YE87_HETAK) HSP 1 Score: 92.4 bits (228), Expect = 7.290e-20 Identity = 47/113 (41.59%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 73 HFRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAIRG 411
+FR+SCLSNLAEVC LL+WSL RY+ DI DLA G+L ME S+E+ ARRG+ +++ ++L + + ++ YR LK A+SD D + + +A+ + +D +RG
Sbjct: 130 NFRSSCLSNLAEVCGLLKWSLDRYAQDIFDLALGILQMEGTNSQEALAARRGSLYIMYKILNSLDSTNFAGIIGSHIKSMYRRLKIVAKSDCDSLCKHNAQMCIDVIDVFMRG 242
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: RTP1_C1 (domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAH2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.140e-19 Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 1
Query: 76 FRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAIRG 411
FRASCLSNLAEVC LL+WS+ Y D+V G+L + ++ T RRGA FLL +L+ GGD+ E+VP + YR LK A +++D V R HA L LD +RG
Sbjct: 809 FRASCLSNLAEVCGLLKWSIQTYIADVVGCVKGILEIGRQNTDAHTALRRGAIFLLFHMLQMMGGDIFEIVPEYMSPI-YRLLKLEASTEKDPVCRYHADQSLALLDTLMRG 919
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9C1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.560e-19 Identity = 58/139 (41.73%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 1 AAVNGGTAEVNEKPPS--LLESKERYHFRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAIRG 411
A V+G + P + + +S E FRASCLSNLAEVC LL+W++ Y D+V G+L E ++ RRGA F+L +L+ G D+LE +P A + YR LK A S+ D V R HA NG+ LD +RG
Sbjct: 797 AFVHGYLGCIRRHPQATKMQDSLEEATFRASCLSNLAEVCGLLQWAIHPYITDVVACVRGILDTERLTTDAHIALRRGAVFVLYHMLQLFGRDILEAIPDAMTPI-YRLLKHEAASETDPVCRFHAENGVKELDTIMRG 934
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: Aste57867_18971 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCX3_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.880e-19 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = 1
Query: 76 FRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAIRG 411
FRASCLSNLAEVC LL+W++ Y D+V G+L +E ++ T RRGA FLL +L+ G D+ E+VP + YR LK A ++ D+V R HA+ L LDA +RG
Sbjct: 802 FRASCLSNLAEVCGLLQWAIQPYIADVVGCVKGILEIERQPTDAHTALRRGAVFLLYHMLQLMGRDMFEIVPE-HMTPIYRLLKLEASTETDDVCRFHAQKSLSELDALMRG 912
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: RTP1_C1 (domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BHA7_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.440e-18 Identity = 53/127 (41.73%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 31 NEKPPSLLESKERYHFRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAIRG 411
+ K P+ E RASCLSNLAEVC LL W++ Y D+V G+L E ++ RRGA F+L +L+ G D+LE VP A + YR LK A +++D V R HA N + LD +RG
Sbjct: 529 SRKLPNDANEIEEATLRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDAMTPI-YRLLKMEASTEKDAVCRFHAENSVKALDTIMRG 654
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: RTP1_C1 (domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL01_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.530e-18 Identity = 53/127 (41.73%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 31 NEKPPSLLESKERYHFRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAIRG 411
+ K P+ E RASCLSNLAEVC LL W++ Y D+V G+L E ++ RRGA F+L +L+ G D+LE VP A + YR LK A +++D V R HA N + LD +RG
Sbjct: 815 SRKLPNDANEIEETTLRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDAMTPI-YRLLKMEASTEKDAVCRFHAENSVKALDTIMRG 940
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Match: RTP1_C1 (domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0I4_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.980e-18 Identity = 51/116 (43.97%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 64 ERYHFRASCLSNLAEVCQLLRWSLGRYSHDIVDLAAGVLSMETGGSEESTLARRGASFLLGRVLRGAGGDVLEMVPAAELRVAYRALKRAAESDRDEVTRSHARNGLGYLDAAIRG 411
E RASCLSNLAEVC LL W++ Y D+V G+L E ++ RRGA F+L +L+ G D+LE VP A + YR LK A +++D V R HA N + LD +RG
Sbjct: 271 EEATLRASCLSNLAEVCGLLHWAISPYITDVVGCVRGILETERLATDAHIALRRGAVFVLYNMLQLMGRDILEAVPDAMTPI-YRLLKMEASTEKDAVCRFHAENSVKALDTIMRG 385 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig800.16170.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig800.16170.1 >prot_E_fasciculatus_S2_contig800.16170.1 ID=prot_E_fasciculatus_S2_contig800.16170.1|Name=mRNA_E_fasciculatus_S2_contig800.16170.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=137bp AAVNGGTAEVNEKPPSLLESKERYHFRASCLSNLAEVCQLLRWSLGRYSHback to top mRNA from alignment at E_fasciculatus_S2_contig800:23576..23987+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig800.16170.1 ID=mRNA_E_fasciculatus_S2_contig800.16170.1|Name=mRNA_E_fasciculatus_S2_contig800.16170.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=412bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig800:23576..23987+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig800:23576..23987+ >mRNA_E_fasciculatus_S2_contig800.16170.1 ID=mRNA_E_fasciculatus_S2_contig800.16170.1|Name=mRNA_E_fasciculatus_S2_contig800.16170.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=411bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig800:23576..23987+ (Ectocarpus fasciculatus EfasUO2)back to top |