mRNA_E_fasciculatus_S2_contig8.16154.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX9_ECTSI) HSP 1 Score: 1051 bits (2718), Expect = 0.000e+0 Identity = 534/601 (88.85%), Postives = 561/601 (93.34%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEETFWPFAPHSRDEKGDIADGKAMGWQQGPGMGLGLQNRAGEGWGQRLSAENDETADARHDGHKSEG--YPAVEELAHRKPDSLETNQNHAREADVRQGLLALTGELPVADQAKYVPASAQHFQSTQVSQGLETLQRRKRRLYPAGDPECLGLPNRGQQHQIQPGAADS-LQGSNLPVFGARVDSSTCESGVDLPADSNGLWMVQPQEARGISSVNPPAPVSSPGRLRAGSRVGTP---VLTASSRRWTLPVPSTAPPVNREGFPLLRLLDGKGKVAPERSWSVDGRIGGARVGQPSPKRTRGVEFWDNLLG 1824
MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRE+ARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAF MKALRQAGVEL+VAPYEADAQLAFLSR+GAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYI +SVKGLGIATAYKLVDRHRSLDKI+GAINSSRFVIPEGYW+QYKRARLTFRHHIIYNP++E DEKG +ADGKAMGWQQGP +GL GEGWGQRLS ++DETADARHDGHK+EG YPA E AHRKPDS ETNQ+HAREA+VRQGLLALTGE+PVADQAK+VPASAQHF+STQVSQGLETLQRRKRRLYPA DPECLGLP+RGQQHQ+QPGAAD L GSNLPVFGARVD+ TC+SGVD PAD++GLWMVQPQEARG+SSVNPPAPVSSP RLRAGSR+G+P VLTASSRRWTLPVPSTAPPVNREGFPLLRLLDGKGKVAPERSWSVD RIGGARVGQPSPKRTRGVEFWDNLLG
Sbjct: 1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRETARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFLLMKALRQAGVELVVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIATAYKLVDRHRSLDKIIGAINSSRFVIPEGYWEQYKRARLTFRHHIIYNPETE-----------DEKGHMADGKAMGWQQGPDIGL---RATGEGWGQRLSVKSDETADARHDGHKNEGCMYPAAEGSAHRKPDSRETNQDHAREANVRQGLLALTGEVPVADQAKFVPASAQHFRSTQVSQGLETLQRRKRRLYPAEDPECLGLPSRGQQHQVQPGAADRMLHGSNLPVFGARVDNPTCKSGVDRPADNSGLWMVQPQEARGMSSVNPPAPVSSPVRLRAGSRLGSPEARVLTASSRRWTLPVPSTAPPVNREGFPLLRLLDGKGKVAPERSWSVDRRIGGARVGQPSPKRTRGVEFWDNLLG 587
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK90_9PHAE) HSP 1 Score: 338 bits (868), Expect = 4.070e-109 Identity = 171/182 (93.96%), Postives = 172/182 (94.51%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKV 585
MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKR I LERRRQRESARSKGEA GAAAQHFSKAVGVTHDMAFH MKALRQAGVELIVAPYEADAQLAFLSR+GAVDVVLSEDSDCLPYGCKKV
Sbjct: 1 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRRITLERRRQRESARSKGEAXXXXXXXGAAAQHFSKAVGVTHDMAFHLMKALRQAGVELIVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKV 182
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX1_9STRA) HSP 1 Score: 333 bits (855), Expect = 1.400e-106 Identity = 159/307 (51.79%), Postives = 226/307 (73.62%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSR-FVIPEGYWDQYKRARLTFRHHIIYNPQSE--ETFWPFAPHSRDEK 951
MGI+GLL LKS+T+P H+ + GL GVDAYCWLHRGA+SC E+C G TDK+V FCM+R+ LLL HG+ P +VFDGA LP+K +N RR R + +K EAA+AAGE AA QH++++V +TH++A F+++L + G++ +VAPYEADAQLAF+S+ G +D +++EDSDCLP+ CK++LFK++N+G QEI+ R+L++N SL+ W SMFLD+CLL GCDY+ V GLGI TA+KLV RHRS ++ A+ +SR F +P+ + D+++ ARLTFRH +Y+P+S P P +R+ +
Sbjct: 1 MGISGLLQTLKSITHPVHVRDLEGLTVGVDAYCWLHRGAYSCSTEICRGEFTDKFVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPR-VHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQ 306
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNX5_9STRA) HSP 1 Score: 329 bits (843), Expect = 1.640e-104 Identity = 159/291 (54.64%), Postives = 207/291 (71.13%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAI---NSSRFVIPEGYWDQYKRARLTFRHHIIYNPQ 903
MGI GLLP LKSVT+ H+ EY+G+ AG+DA+CWLHRGAF+C EL G TDKY+ FCM+RV +L +GI P MVFDGAS+P KR ++L RR R AR+K A G+ G A F KAV +TH+MA+ +K L++A V +VAPYEADAQLA+L+R G VD+V+SEDSD LPYGC +VLFK+D EG QEI+ RNLA N W +MFLD+CLL GCDY+ ++ GLGI TA+KLV +HR+ K++GA+ +P Y +++ RARLTFRHH +Y+P+
Sbjct: 1 MGIAGLLPLLKSVTHTVHLREYQGMMAGIDAFCWLHRGAFTCCTELVLGKTTDKYIRFCMERVRILQENGITPFMVFDGASIPAKRDLHLSRRAARTEARAKALAVHEEGQIGQARTLFQKAVIITHEMAYELIKCLQEANVRYMVAPYEADAQLAYLARKGVVDLVISEDSDTLPYGCPRVLFKLDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLP-NLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPE 290
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RZD7_SELML) HSP 1 Score: 277 bits (709), Expect = 6.300e-84 Identity = 134/291 (46.05%), Postives = 194/291 (66.67%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEE 912
MGI GLLP LKS+T T++ EY G++ VD Y WLH+ AFSC ++C G AT ++ +CM RVNLL HHGI+P++VFDG SLP+K +R R RE A+G AA H+ KAV +T ++A + LR+ VE IV+PYEADAQ+AFL+ G VD V++EDSD + YGC K+LFKMD G G E+Q +L N L+L+++ M L++C+L GCDY+ S++G+G+ A+ L+ R RS +K++ + S +IP+ Y + +++A LTF HH++Y+P +E
Sbjct: 1 MGIQGLLPALKSITTSTNVKEYSGMRVAVDTYSWLHKAAFSCSKDICDGRATASFLNYCMHRVNLLRHHGIKPLLVFDGGSLPMKAEQEEKRSRAREEHLKLARECEASGNHAAAYDHYQKAVDITPEVAHQLILVLRRENVEYIVSPYEADAQMAFLALRGVVDAVITEDSDLVAYGCPKILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLP-SLQGMGVKRAHNLIRRFRSYEKVIRHLKFSGVMIPKSYEEGFRKALLTFCHHLVYDPTQDE 290
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QPV1_9CRYP) HSP 1 Score: 273 bits (699), Expect = 5.840e-83 Identity = 140/313 (44.73%), Postives = 193/313 (61.66%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRS--------LDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSE--ETFWPFAPHSRDE 948
MGI+GLLP L ++ H+S Y+G+K VD Y WLHRGA+SC +ELCTG TDKY+ +C+ RV LLLHHG+ PVM+FDGA LP K+ R+ RE ++KG AL + AA ++F +AV +T MA +KALR+ VE IVAP+EADAQLA+L+ G V V+SEDSD + +G V+FKMD EGHG+E + + L A L L+ W++ FL +C+ GCDY+ S+ GLGI A+ + S K + + V+P Y ++RA LTFRH ++Y+P+ WP P + E
Sbjct: 1 MGISGLLPVLGNIMESKHVSVYKGMKVAVDTYGWLHRGAYSCSLELCTGAPTDKYITYCIDRVKLLLHHGVTPVMIFDGADLPSKKGTETNRKSSREEFKAKGLQALRSDNRAAAMEYFQRAVDITPRMAHRLIKALRKIKVECIVAPHEADAQLAYLNLKGYVQAVISEDSDIVAFGADTVMFKMDREGHGREYRRKLLGACDKLRLAGWEHERFLQMCIFAGCDYLK-SLNGLGIKRAHAAIQGDGSNRAAPEECYIKALTRLRLEGTVVPPTYQADFRRAYLTFRHQLVYDPEQACLLPIWPVPPELQGE 312
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: exonuclease (1 n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C6787) HSP 1 Score: 277 bits (709), Expect = 2.250e-81 Identity = 134/291 (46.05%), Postives = 194/291 (66.67%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEE 912
MGI GLLP LKS+T T++ EY G++ VD Y WLH+ AFSC ++C G AT ++ +CM RVNLL HHGI+P++VFDG SLP+K +R R RE A+G AA H+ KAV +T ++A + LR+ VE IV+PYEADAQ+AFL+ G VD V++EDSD + YGC K+LFKMD G G E+Q +L N L+L+++ M L++C+L GCDY+ S++G+G+ A+ L+ R RS +K++ + S +IP+ Y + +++A LTF HH++Y+P +E
Sbjct: 1 MGIQGLLPALKSITTSTNVKEYSGMRVAVDTYSWLHKAAFSCSKDICDGRATASFLNYCMHRVNLLRHHGIKPLLVFDGGSLPMKAEQEEKRSRAREEHLKLARECEASGNHAAAYDHYQKAVDITPEVAHQLILVLRRENVEYIVSPYEADAQMAFLALRGVVDAVITEDSDLVAYGCPKILFKMDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLP-SLQGMGVKRAHNLIRRFRSYEKVIRHLKFSGVMIPKSYEEGFRKALLTFCHHLVYDPTQDE 290
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RHQ3_PHYPA) HSP 1 Score: 266 bits (680), Expect = 8.530e-81 Identity = 129/287 (44.95%), Postives = 185/287 (64.46%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNP 900
MGI GLLP LKS+ P HI +Y G + +D Y WLH+ AFSC ELC G+ DKY+ +CM RVN+L H G+QPV+VFDG LP+K ++R R R+ + G AA Q + +AV +T +AF +K LRQ VE +VAPYEADAQ+AFL+R+G VD+V++EDSD + YGC ++ FKMD G G Q ++ AN + +N+ M L++C++ GCDY+ S+ G+G+ A+ L+ R ++ K+M + S +I E Y ++RA LTF+HH +Y+P
Sbjct: 1 MGIQGLLPTLKSIMNPRHIRDYAGKRVAIDTYSWLHKAAFSCSKELCLGLPNDKYIDYCMHRVNMLRHFGLQPVLVFDGGGLPMKSDQEMKRARSRKENLERALEHERLGNFTAAMQCYQRAVDITPAIAFRLIKVLRQENVEYVVAPYEADAQMAFLARNGHVDLVITEDSDLIAYGCPQIFFKMDKYGQGVGFQFSDITANKDIDFNNFSRQMILEMCIMSGCDYLP-SLPGMGVKKAHGLMKRFKTYIKVMKHLKFSGVLIDEQYEQGFRRAILTFQHHRVYDP 286
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W9B0_MARPO) HSP 1 Score: 278 bits (711), Expect = 2.410e-80 Identity = 143/307 (46.58%), Postives = 195/307 (63.52%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAINSSRFVIPEGYWDQYKRARLTFRHHIIYNPQSEETFWPFAPHSRDEKGDI 960
MGI+GLLP LKS+ P H+ EY GLK +D Y WLH+ AFSC +LC G TDK V +CM RVNLL HHG+QPV+VFDG LP+K R R R+ + + +G AA Q + KAV +T +A +K L+Q GVE IVAPYEADAQ+A+L+ + V VV++EDSD + YGC +VLFKMD GHG+E Q +L N L+ +N+ M L++C++ GCDY+ S+ G+G+ A+ L+ R +S +K++ + S IP Y + + RA LTFRH +Y+P SEE S DE D+
Sbjct: 1 MGISGLLPTLKSIITPIHVREYAGLKVAIDTYSWLHKAAFSCSKDLCEGRPTDKIVQYCMHRVNLLRHHGVQPVLVFDGGVLPMKMDQEQIRARSRKENLQRAQEHERSGNHTAAFQCYQKAVDITPVIALSLIKVLQQEGVEYIVAPYEADAQMAYLALNDLVQVVITEDSDLIAYGCPRVLFKMDKSGHGEEFQYSDLVRNKDLNFTNFTKQMVLEMCIMSGCDYLP-SLPGMGVKRAHGLMRRFKSYEKVIRHLRFSGITIPSDYEELFGRAILTFRHQRVYDPISEEMVHLTNVSSVDEFSDL 306
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Match: Exonuclease (1 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3P1_9STRA) HSP 1 Score: 270 bits (690), Expect = 1.350e-79 Identity = 145/291 (49.83%), Postives = 192/291 (65.98%), Query Frame = 1
Query: 40 MGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRGAFSCGMELCTGVATDKYVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRESARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFHFMKALRQAGVELIVAPYEADAQLAFLSRSGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYISTSVKGLGIATAYKLVDRHRSLDKIMGAIN-SSRFVIPEGYWDQYKRARLTFRHHIIYNPQSE 909
MGI+ LLP LKS+T T + Y+G VD Y WLHRGA+SC ELC G+ TD+YV + M+RV LL+ GI P +VFDG LP+K+ ERR RE R G A L A + A Q F KAV V+ MA ++ L++ GV+ IVAPYEADAQ+A+L R+GAVD V+SEDSDCLPYGC VLFKMD G+ + IQ +LA NT LS + + MFLD+C+L GCDY++ S+ GLG+ ++ L+ R+ S K++ A+ + I + Y RARLTFRH +Y+P S+
Sbjct: 1 MGISNLLPQLKSITKSTTLHAYKGKTVAVDGYVWLHRGAYSCSQELCLGLDTDRYVGYFMERVGLLIKCGIIPYIVFDGGYLPMKKLKEDERRLSREKHREAGLAYLKANKLDLARQSFVKAVDVSPSMAHRVIQRLQETGVKYIVAPYEADAQMAYLVRTGAVDAVISEDSDCLPYGCHHVLFKMDTPGNVEVIQAAHLALNTTLSFVGFTDDMFLDMCILSGCDYVA-SIPGLGVKKSHGLMLRYGSYQKVVRALRLEGKLPITKTYEADVARARLTFRHQRVYDPVSQ 290 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8.16154.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8.16154.1 >prot_E_fasciculatus_S2_contig8.16154.1 ID=prot_E_fasciculatus_S2_contig8.16154.1|Name=mRNA_E_fasciculatus_S2_contig8.16154.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=609bp ASSPVCHRVRWARMGITGLLPFLKSVTYPTHISEYRGLKAGVDAYCWLHRback to top mRNA from alignment at E_fasciculatus_S2_contig8:55253..62857+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8.16154.1 ID=mRNA_E_fasciculatus_S2_contig8.16154.1|Name=mRNA_E_fasciculatus_S2_contig8.16154.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7605bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8:55253..62857+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8:55253..62857+ >mRNA_E_fasciculatus_S2_contig8.16154.1 ID=mRNA_E_fasciculatus_S2_contig8.16154.1|Name=mRNA_E_fasciculatus_S2_contig8.16154.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1827bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8:55253..62857+ (Ectocarpus fasciculatus EfasUO2)back to top |