mRNA_E_fasciculatus_S2_contig799.16141.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 277 bits (709), Expect = 1.960e-83 Identity = 136/155 (87.74%), Postives = 143/155 (92.26%), Query Frame = 2
Query: 338 GKMLYALAQKRCGNFGTCGGDDGVTGTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDAKHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
GKMLYALAQKRCGNFGTCGG DG+TGTAA+ND +LE I AGSGYLLEGKCAEAE AKE IV+LM VPL+Q TLRYLYRADPASDYDGDAKHWAE WAFAAAILPLI+ECSADVAHTV +NSDIDSEHAPVS GFVAVKE LESIYSCLGMTCDQV
Sbjct: 564 GKMLYALAQKRCGNFGTCGGADGITGTAAINDDILELIGAGSGYLLEGKCAEAEEAKESIVQLMTVPLVQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGFVAVKEELESIYSCLGMTCDQV 718
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE2_ECTSI) HSP 1 Score: 235 bits (600), Expect = 5.340e-75 Identity = 129/181 (71.27%), Postives = 140/181 (77.35%), Query Frame = 2
Query: 260 IPQRSALLDLNPSRARFSFVCFSMF*GKMLYALAQKRCGNFGTCGGDDGVTGTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDAKHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
I R ALLD R S +CF + GK + + + DGVT TAA+ND VLE IVAGSGYLLEGKCAEAE A+ RIV+LMAV LLQGTLRYLYRADPASDYDGDAKHWAE WAFAAAILPLI+ECSADVAHTV +NSDIDSEHAPVS G VAVK+ LESIYSCLGMTCDQV
Sbjct: 2 IGGRPALLDPIAPSTRLS-LCFCLCHGKNAVRPSAEEVRHRRDLRRRDGVTETAAINDDVLELIVAGSGYLLEGKCAEAEDAQGRIVQLMAVLLLQGTLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGLVAVKKELESIYSCLGMTCDQV 181
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Probable (high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 168 bits (425), Expect = 8.710e-46 Identity = 88/158 (55.70%), Postives = 109/158 (68.99%), Query Frame = 2
Query: 338 GKMLYALAQKRCGNFGTCGGDDG---VTGTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDAKHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
G MLYALA+KRC NF TC DD +TGTA VN +LE G YLL+G C A K++I+ LM VPL+QG LRY Y ADP + DG K AE WAF+AA+LP INEC +VA V AN+DI S AP+S+G+V +KE LES+YSC+G++C QV
Sbjct: 200 GVMLYALAEKRCENFATCTADDDGSDITGTAQVNSDMLELYKEGQVYLLDGDCGAAGDVKDKIIDLMGVPLVQGMLRYFYNADPEAG-DGGDKAAAELWAFSAAMLPRINECDEEVATLVRANTDIASADAPMSEGYVFLKEQLESVYSCMGISCSQV 356
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 156 bits (394), Expect = 3.730e-40 Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 2
Query: 344 MLYALAQKRCGNFGTCGGD-DG--VTGTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDAKHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
M+YALA+KRC NFGTC GD DG TG +A+N +L G LL G+C EA + I+ LMAVPL+QG LRY Y ADPA GD K AE WAF+AAILP I+ C A V TV N+++ S AP++DG+ A+K LES+YSC+G+TC QV
Sbjct: 1 MIYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWETGQANLLAGECTEASAVIDEILPLMAVPLIQGLLRYTYLADPAIGTGGD-KEAAELWAFSAAILPWISACDAAVGTTVRDNTELGSASAPMADGYAAIKVQLESVYSCMGITCAQV 155
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 154 bits (389), Expect = 8.300e-39 Identity = 82/158 (51.90%), Postives = 106/158 (67.09%), Query Frame = 2
Query: 338 GKMLYALAQKRCGNFGTCGGD-DG--VTGTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDAKHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
G+M+YALA+KRC NFGTC GD DG TG +A+N +L G LL +C EA ++IV LMAVPL+QG LRY Y ADPA GD K AE WAF+A+ILP I+ C A V V N+++ S AP++DG+ A+K LE++YSC+G+TC QV
Sbjct: 1309 GQMIYALAEKRCENFGTCSGDTDGSDATGVSAINSELLTLWEVGKANLLAEECTEASAVIDQIVPLMAVPLIQGLLRYTYLADPAIGTGGD-KEAAELWAFSASILPWISACDAAVGTAVRDNTELGSASAPMADGYAAIKTQLETVYSCMGITCAQV 1465
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVU0_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.100e-38 Identity = 80/159 (50.31%), Postives = 99/159 (62.26%), Query Frame = 2
Query: 338 GKMLYALAQKRCGNFGTCGGDDG----VTGTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDAKHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
G +LY+LA KRC NFGTC GD G ++GT+AVN+ V+ G L G C E K IV M +PL+QGTLRYLY+ADP +G+ K AE WAFAAAILP +++C A VA + NS I ++ P+ DGF VKE LE YSCLG C V
Sbjct: 38 GNLLYSLADKRCANFGTCTGDVGNSNAISGTSAVNERVMNLFREGQVNLHNGDCGHVEEVKGAIVDQMTIPLVQGTLRYLYKADPKGANEGN-KARAELWAFAAAILPRVDKCDAGVATMLRENSYIGND--PMKDGFKTVKEALEKTYSCLGFKCSDV 193
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 147 bits (372), Expect = 7.060e-37 Identity = 81/159 (50.94%), Postives = 101/159 (63.52%), Query Frame = 2
Query: 338 GKMLYALAQKRCGNFGTCGGDDGVT----GTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDAKHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
G +LY+LA KRC NFGTC GD G + G AAVN+ +++ GS L G C E E K IV M +PL+QGTLRYLY+ADP +G+ K AE WAF+AA+LP I EC + VA + NS I + P+ DG+VAVKE LE+ YSCLG C V
Sbjct: 429 GNLLYSLADKRCANFGTCTGDVGSSNSQSGRAAVNERIIDLFRDGSVKLHNGDCGEVEKVKNAIVDQMTIPLVQGTLRYLYKADPKGANEGN-KARAELWAFSAAVLPRIAECDSGVASMLRENSYIGKD--PMKDGYVAVKEALETTYSCLGFMCSDV 584
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU13_9STRA) HSP 1 Score: 139 bits (349), Expect = 6.490e-35 Identity = 77/159 (48.43%), Postives = 96/159 (60.38%), Query Frame = 2
Query: 338 GKMLYALAQKRCGNFGTCGGDD---GVTGTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDA-KHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
G + Y LA+KRC NFGTC GDD TG + VND +L G L +GKC AE IVK M VPL+QGTLRY Y+ADP D A K AE WAF +A+LP I+ C A VA + AN + +PV+DG+ AV ++ +YSCLG+TC V
Sbjct: 111 GVLAYRLAEKRCANFGTCNGDDDGDATTGKSLVNDQLLSLYKQGMHALEDGKCNSAEVILRAIVKQMTVPLIQGTLRYAYKADPNGGADTPASKQQAEGWAFTSAVLPQIDACDAGVASMIRANMEY-GVASPVADGYAAVYAEMQKVYSCLGITCADV 268
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Hypothetical (protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1L9M0_9DINO) HSP 1 Score: 131 bits (330), Expect = 2.080e-31 Identity = 73/155 (47.10%), Postives = 94/155 (60.65%), Query Frame = 2
Query: 338 GKMLYALAQKRCGNFGTCGGDDGVTGTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDAKHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
GK+LY LA KRCGNFGTCG TGT VN ++EQ G LL+ KC E K RIV+LM+VPL+QG+LRY Y+ D G +K AE F+AA+LP + C A T+ N + +P+S GF AVK ES Y+CLG+TC+ +
Sbjct: 319 GKLLYRLAVKRCGNFGTCGS----TGTG-VNALIMEQFTRGKNKLLQSKCVEVVPIKRRIVELMSVPLVQGSLRYAYKVDKLQ---GGSKERAEGDVFSAAVLPRVAACDVGAAQTISDNLAY-AATSPMSSGFAAVKAAFESTYACLGVTCEDI 464
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XA87_9EUKA) HSP 1 Score: 129 bits (324), Expect = 4.130e-31 Identity = 70/155 (45.16%), Postives = 90/155 (58.06%), Query Frame = 2
Query: 338 GKMLYALAQKRCGNFGTCGGDDGVTGTAAVNDAVLEQIVAGSGYLLEGKCAEAEGAKERIVKLMAVPLLQGTLRYLYRADPASDYDGDAKHWAEFWAFAAAILPLINECSADVAHTVMANSDIDSEHAPVSDGFVAVKEGLESIYSCLGMTCDQV 802
G + YALA+KR FGT D G+A VN V++ G LL GKCAE E +++IV + VPL+QG LRY DPA AK AE WAFA A+LP IN C+ VA + N + P+ DG+ VK+ ES+YSC+G+TCD V
Sbjct: 194 GVLGYALAEKRAPQFGTANSD----GSAIVNAEVMDLFKDGQSKLLAGKCAEVETVRDKIVAQITVPLVQGALRYALLTDPAGPIRQGAKGQAEGWAFAIAVLPQINRCNPTVAAEIRENLQYPNPQGPMVDGYRYVKQQFESVYSCMGITCDSV 344 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig799.16141.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig799.16141.1 >prot_E_fasciculatus_S2_contig799.16141.1 ID=prot_E_fasciculatus_S2_contig799.16141.1|Name=mRNA_E_fasciculatus_S2_contig799.16141.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=176bp MASTKSCRYSSTVCSARPESFARTVLFCVFLYVLGKNAVCSGAEEVRQLRback to top mRNA from alignment at E_fasciculatus_S2_contig799:13457..14781- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig799.16141.1 ID=mRNA_E_fasciculatus_S2_contig799.16141.1|Name=mRNA_E_fasciculatus_S2_contig799.16141.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1325bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig799:13457..14781- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig799:13457..14781- >mRNA_E_fasciculatus_S2_contig799.16141.1 ID=mRNA_E_fasciculatus_S2_contig799.16141.1|Name=mRNA_E_fasciculatus_S2_contig799.16141.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=528bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig799:13457..14781- (Ectocarpus fasciculatus EfasUO2)back to top |