mRNA_E_fasciculatus_S2_contig797.16123.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: Cupin (type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 395 bits (1014), Expect = 9.840e-138 Identity = 197/228 (86.40%), Postives = 207/228 (90.79%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGMAEPGKDFSYDYIYD 684
MKTSFCAAAG V+AAGLM S Q GVVT QQQITL NPEDF F+LGGPEPD LVDGFQ+R VNQLPALDGQGISM LVNLDPCAINLPHIHPRATEM++VIKGEQ+RVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNN+DPGA+TITTRFFELP EAIQAS+NFEEP LQ LIESLP+APAAARQQCLQRC MAEPG FSYDY YD
Sbjct: 1 MKTSFCAAAGFVIAAGLM-SAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRMAEPGNHFSYDYTYD 227
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: Cupin-like (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 379 bits (973), Expect = 1.350e-131 Identity = 186/227 (81.94%), Postives = 204/227 (89.87%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGMAEPGKDFSYDYIY 681
MKTSFC+AAGLV+AAG M STAQASGVVTAQQQIT+ NPEDF FTLGGPEPD VDGFQIR + Q+PALDGQGI+MALVNLD C INLPHIHPRATEM +VI GE +RVAFVEENGGEGAVVNDL+QGDV FFPQGLIHY+QNL CEP TFLAALNNDDPGAVTITTRFFELP+EAIQASLNFE+PALQ+LIESLP+APAAAR+QCL+RCG+A+ G FSY Y Y
Sbjct: 1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGLADGGDGFSYSYGY 227
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: Cupin-like (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI) HSP 1 Score: 181 bits (458), Expect = 1.270e-54 Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEM 300
MKT FCAAAG V+AAGLMPST QASGVVTAQQQITL NPEDF F+LGGPEPD LVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE+
Sbjct: 1 MKT-FCAAAGFVIAAGLMPSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEV 99
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: Cupin-like (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI) HSP 1 Score: 177 bits (449), Expect = 1.160e-53 Identity = 90/99 (90.91%), Postives = 92/99 (92.93%), Query Frame = 1
Query: 1 MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 297
MKT FCAAAG V+AAGLM ST QASGVVTAQQQITL NPEDF F+LGGPEPD LVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE
Sbjct: 1 MKT-FCAAAGFVIAAGLMSSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: Cupin (type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 168 bits (425), Expect = 3.690e-48 Identity = 90/192 (46.88%), Postives = 122/192 (63.54%), Query Frame = 1
Query: 85 TAQQQITLLNPEDFAFTL-GGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFE-EPALQKLIESLPEAPAAARQQCLQRCGMAEPG 654
T Q++ N EDF L P+ + G + +N+ +PAL QG++M L+NL+PC NLPH+HPRA+E ++VI+G V+V F+EENG + +VNDL QG F PQG IHYQ NL CE A +AA NN+DPG +TI +FF+LP AI ASL +P ++ L SLP PA ++CL+RCG G
Sbjct: 37 TEVQRMKQFNHEDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGN-VQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCGFGAYG 226
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: Cupin (type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 159 bits (402), Expect = 6.850e-44 Identity = 83/175 (47.43%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 124 FAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAA--RQQCLQRCGM 642
F F E DT G + +V+Q PAL G G+S LV+L PC+IN PH+HPRATE++++IKG +V V F EENGG V ND+ +GD AFFP LIH+Q N CEPA F+A LN+DD G TI FF LP + + +L +E + L E LP PA R++C ++CG+
Sbjct: 147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKG-RVSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: Cupin (type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG82_VITBC) HSP 1 Score: 146 bits (368), Expect = 1.220e-39 Identity = 78/176 (44.32%), Postives = 103/176 (58.52%), Query Frame = 1
Query: 121 DFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAA--RQQCLQRCGM 642
DF F + T +G IR Q PAL G G S + ++ PC+IN PH+HPRATEML++ KG + V F EENGG V ND+ +G+ AFFP LIH+Q N CEPA F+ LN+DD G TI F LP + + +LN +E + L + LP PA R QC ++CG+
Sbjct: 73 DFTFDFNEAQVLTNGEGGGIRGATPVQWPALSGHGFSQTVTDIAPCSINTPHLHPRATEMLYITKGRLI-VGFAEENGGR-IVTNDIKEGNSAFFPHTLIHWQFNPTCEPAQFVGTLNSDDGGVHTIAQALFGLPNDVLATALNVDEYDVTLLHDELPNVPALGLKRDQCRRKCGL 246
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: Cupin (type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA) HSP 1 Score: 147 bits (370), Expect = 1.830e-39 Identity = 74/178 (41.57%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 118 EDFAFTLGGPEP---DTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKGEQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPTEAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGM 642
EDF F D+L G I+ VN+ + P + G+S + ++ PC INLPH+HPRATE L++I+G QV + FV + ++NDL + V FFP+G +HYQQN++CE A F++ L+N+DPG + +++ LP EA+ A+ N ++ + +L LPE PA AR +CL RCG+
Sbjct: 108 EDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEG-QVTLGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGL 282
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: RmlC-like (cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA) HSP 1 Score: 142 bits (359), Expect = 5.640e-39 Identity = 79/182 (43.41%), Postives = 104/182 (57.14%), Query Frame = 1
Query: 121 DFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKG--EQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPT------EAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGM 642
DF F L G G + ++ QLP+L G+ ++M + L+PC INLPH+HPRATE+L+V+ E V AFVEENGG + N + G+ AFFPQGL H Q N+ C PAT +AAL +DD G TITT E E + A+L + L LI P+ PA +C QRCG+
Sbjct: 9 DFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Match: RmlC-like (cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA) HSP 1 Score: 144 bits (362), Expect = 8.630e-39 Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 1
Query: 121 DFAFTLGGPEPDTLVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEMLFVIKG--EQVRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNDDPGAVTITTRFFELPT------EAIQASLNFEEPALQKLIESLPEAPAAARQQCLQRCGM 642
DF F L G + T G + ++ QLP+L G+ ++M + L+PC INLPH+HPRATE+L+V+ E V AFVEENGG + N + G+ AFFPQGL H Q N+ C PAT +AAL +DD G TITT + E + A+L + L LI P+ PA +C QRCG+
Sbjct: 60 DFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 240 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig797.16123.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig797.16123.1 >prot_E_fasciculatus_S2_contig797.16123.1 ID=prot_E_fasciculatus_S2_contig797.16123.1|Name=mRNA_E_fasciculatus_S2_contig797.16123.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=240bp MKTSFCAAAGLVMAAGLMPSTAQASGVVTAQQQITLLNPEDFAFTLGGPEback to top mRNA from alignment at E_fasciculatus_S2_contig797:7493..9492- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig797.16123.1 ID=mRNA_E_fasciculatus_S2_contig797.16123.1|Name=mRNA_E_fasciculatus_S2_contig797.16123.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2000bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig797:7493..9492- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig797:7493..9492- >mRNA_E_fasciculatus_S2_contig797.16123.1 ID=mRNA_E_fasciculatus_S2_contig797.16123.1|Name=mRNA_E_fasciculatus_S2_contig797.16123.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=720bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig797:7493..9492- (Ectocarpus fasciculatus EfasUO2)back to top |