mRNA_E_fasciculatus_S2_contig7968.16121.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7968.16121.1
Unique NamemRNA_E_fasciculatus_S2_contig7968.16121.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: PAS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK0_9PHAE)

HSP 1 Score: 716 bits (1849), Expect = 2.800e-253
Identity = 437/567 (77.07%), Postives = 457/567 (80.60%), Query Frame = 1
Query:  151 DRHDVAEVGSPALSGGVISSPSPEPYHPCSLPPLQQPHQQLQDVLDWPASPRLGGWQAPPSRAMSPMAASGPVVFSTEGDFLQSLQSTG-GGNAAWEHEEGSTTTDNGSSDCSEDMDPVPLFPFH--HKNPQNNGCTFEDSLQSLVEEVAGGGGGVSNCFDLADAAAQAAAAAPSPTAIVPRAGGLQNLVFPAAAKAAAVXXXXX--GTAAAAIVPRGVLEKVSLGKQLLVSPGPSSQVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAAVGKPAKKVAGNGPKKQKKQPLQEQKNPSSPVQLKIKIARKTKALGTGTPEEGPANG--GRPRKAARTAAVTLVAKNPPKSGGVRKAAGRVGGSSTKRVKVSPSKGSPAPASSAVATGGDG---DRFLDEKARRSREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLGASLLDLVEPKDAQAVVQAIMDTLSRGGIKQAS-------CVQYRMRPPSSADAIEVETSFRIASRRLLAITRIVAAGVPRSVSPAQ 1800
            ++HDV   GSPALSGGV+SSPSPEPYH CSL PLQQ HQQLQDVLDWPASPRLG  QAPPSRA+SPMAAS PVVFSTEGDFLQ+LQSTG GG+ AWEHE GSTTTDNGSSDCSED+DPVPLFPFH  H    NNGCTFEDSLQSLVEEV GGGG VSNCFDLADAAA+AA AA +PTA+VPRA G +NLVFPAAA A   XXXXX  GTAAA IVPRGVL+KVSLGKQLLVSPG SS V                              PA   GK  K+VAGN PKK KKQPLQEQ N SSPVQLKIK A+K KALGTGTPE   A    GRPRKAART A T VAK PPKSG VRKAAGR  GSSTKRVKVS SKGSPAPAS AVA G DG   DRFLD+KARR+REKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSA+ADAFFALASGAFYRQLGFEPTK+LG SLLDLVEPKD QAVVQAIMDTLSRGGIKQAS        VQYRMRPPS  DA+EVETSFR+ASRRLLAITRIV AGV R VSPAQ
Sbjct:    2 EQHDV---GSPALSGGVVSSPSPEPYHSCSLLPLQQQHQQLQDVLDWPASPRLGALQAPPSRALSPMAAS-PVVFSTEGDFLQTLQSTGCGGSTAWEHE-GSTTTDNGSSDCSEDLDPVPLFPFHPNHHQNNNNGCTFEDSLQSLVEEVTGGGG-VSNCFDLADAAAEAATAASAPTAVVPRASGPKNLVFPAAAAAXXXXXXXXXVGTAAAGIVPRGVLDKVSLGKQLLVSPGSSSPVAPATAAAPVSPPTSPPHTQQQQAPKRKQR-PAVGSGKSIKRVAGNVPKKHKKQPLQEQNN-SSPVQLKIKTAKKAKALGTGTPEAPAAEAAEGRPRKAARTPA-TSVAKIPPKSGDVRKAAGRGEGSSTKRVKVSLSKGSPAPASPAVAAGKDGKDGDRFLDDKARRNREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGTSLLDLVEPKDVQAVVQAIMDTLSRGGIKQASFMHSVPKLVQYRMRPPSDGDAVEVETSFRMASRRLLAITRIVGAGVSRPVSPAQ 559          
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: PAS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL9_ECTSI)

HSP 1 Score: 613 bits (1581), Expect = 4.080e-213
Identity = 414/583 (71.01%), Postives = 432/583 (74.10%), Query Frame = 1
Query:   67 RASSWASSPTAKLYEAGAPHQRQLLQPKDRHDVAEVGSPALSGGVISSPSPEPYHPCSLPPLQQPHQQLQDVLDWPASPRLGGWQAPPSRAMSPMAASGPVVFSTEGDFLQSLQSTGGGNAAWEHEEGSTTTDNGSSDCSEDMDPVPLFPFHHKNPQNNGCTFEDSLQSLVEEVAGGGGGVSNCFDLADAAAQAAAAAPSPTAIVPRAGGLQNLVFPAAAKAAAVXXXXXGTAAAAIVPRGVLEKVSLGKQLLVSPGPSSQVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----PAAAVGKPAKKVAGNGPKKQKKQPLQEQKNPSSPVQLKIKIARKTKALGTGTPEEGPANGGRPRKAARTAAVTLVAKNPPKSGGVRKAAGRVGGSSTKRVKVSPSKGSPAPASSAVATGG-DGDRFLDEKARRSREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLGASLLDLVEPKDAQAVVQAIMDTLSRGGIKQASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRIVAAGVPRSVSPAQ 1800
            RASSWASSPTAKLYEAGAP Q+QLLQPK++HDV +VGSPALSGGV+SSPSPEPYHPCSL PLQ  HQQLQDVLDWPASPRLGG QAPP+RA+SPMAA                                                                    SLQSLVEEVAGGGG VSNCFDLADAAA+AAAAA S TA V RA G +NLVFPA       XXX  GTAAAAIVPRGVLEKVSLGKQLLVSP  SS V  XXXXXXXXXXXXXXXXXXXXXXXXX       PA   GKP KKVAGNGPKKQKKQPLQEQKNPS                            GRPRKAARTAA T +AK+PPKSGGVRKAAGR GGSSTKRVKVSPS GSPAPAS AVA  G DGDRFLD+K RRSREKNRDHSRRSR+RKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSA+ADAFFALASGAFYRQLGFEPTK+LGASLLDLVE KD QAVVQAIMDTLSRGGIKQ   VQYRMRPPS  DA+EVETSFR+ASRRLLAITRIV AGVPRSVSPA+
Sbjct:    5 RASSWASSPTAKLYEAGAP-QQQLLQPKEQHDVRDVGSPALSGGVVSSPSPEPYHPCSLLPLQHQHQQLQDVLDWPASPRLGGLQAPPTRALSPMAA--------------------------------------------------------------------SLQSLVEEVAGGGG-VSNCFDLADAAAEAAAAAFSHTATVSRASGSKNLVFPAXXXX--XXXXKVGTAAAAIVPRGVLEKVSLGKQLLVSPECSSPVAAXXXXXXXXXXXXXXXXXXXXXXXXXAPKRKQRPAVGSGKPTKKVAGNGPKKQKKQPLQEQKNPSXXXXXXXXXXXXXXXXXXXXXXXXXXAEGRPRKAARTAA-TSMAKSPPKSGGVRKAAGRGGGSSTKRVKVSPSNGSPAPASPAVAAAGKDGDRFLDDKTRRSREKNRDHSRRSRQRKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGASLLDLVETKDVQAVVQAIMDTLSRGGIKQ---VQYRMRPPSDGDAVEVETSFRMASRRLLAITRIVGAGVPRSVSPAK 511          
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: PAS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ44_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.250e-24
Identity = 71/152 (46.71%), Postives = 92/152 (60.53%), Query Frame = 1
Query: 1321 DEKARRSREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLGASLLDLVEPKDAQAVVQAIMDTLSRGGIKQASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRIVAAGV 1776
            +E+  R+R +NRDHSRRSR+RKKA +EG+K    +LG YRMLVEQAHD+IS H+ +    F  AS AF R LG     LLG  L+ LV P DA  V +A+   L    + Q   V YR+R         VE+SFR+   +L+AITR+   GV
Sbjct:  178 EERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRALGIRTEDLLGVQLIHLVHPDDAGRVTEALRRALLCNQVTQV--VVYRLR--HQQQEFTVESSFRVVPTKLVAITRVGGPGV 325          
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: Multi-sensor (hybrid histidine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G032_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 8.770e-17
Identity = 53/124 (42.74%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 1405 LKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLGASLLDLVEPKDAQAVVQAIMDTLSRGGIKQASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRIVAAGV 1776
            +K    +LG YRMLVEQAHD+IS H+ +    F  AS AF R LG     LLG  L+ LV P DA  V +A+   L    + Q   V YR+R         VE+SFR+   +L+AITR+   GV
Sbjct:    1 MKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGISTEDLLGVQLIHLVHPDDAGRVTEALPPALLCNQVTQV--VVYRLR--HQQQEFTVESSFRVVPTKLVAITRVGGPGV 120          
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: PAS (domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WZ67_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.150e-10
Identity = 54/147 (36.73%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 1327 KARRSREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLGA--SLLDLVEPKDAQAVVQAIMDTLSRGGIKQASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRI 1761
            K  +SRE+NRDHSR+SR RKK  +E LK     L  Y+ + EQ  D I++ +A + A F  +S A+ R LG++P +++    S LDLV P +AQ V +A+    S  G  +    Q+R++     +    ETS R+A + ++  TR+
Sbjct:  238 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCLDCIALVAAESSAIFLYSSAAYTRVLGYQPHQIVPGQTSFLDLVHPDNAQEV-RAVFTKFSTLG--ETRRFQFRIKS-MEGEYFRAETSARLAEKGVVCSTRV 380          
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: PAS (domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPB1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 5.080e-9
Identity = 50/147 (34.01%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 1327 KARRSREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLGA--SLLDLVEPKDAQAVVQAIMDTLSRGGIKQASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRI 1761
            K  +SRE+NRDHSR+SR RKK  +E LK     L  Y+ + EQ  D I++ +A A A F  +S A+ R LG++  +++    S LD+V P + Q V +A+   L+  G  +    ++R++  +  +    ET+ R+A + ++  TR+
Sbjct:  139 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAVFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEV-RAVFTKLNTLG--ETHRFKFRIKS-TDGEYFPAETTARLAEKGVVCSTRV 281          
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: PAS (domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1Z3_PYTIN)

HSP 1 Score: 69.7 bits (169), Expect = 5.410e-9
Identity = 53/148 (35.81%), Postives = 83/148 (56.08%), Query Frame = 1
Query: 1327 KARRSREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLG--ASLLDLVEPKDAQAVVQAIMDTLSR-GGIKQASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRI 1761
            K  +SRE+NRDHSR+SR RKK  +E LK     L  Y+ + E   D+I + +A   A F   S ++ R LG++ ++L+   AS LDLV P    A V++I    S  G  K+    ++R+R  +  +  + ETS R+A + ++  TR+
Sbjct:  262 KEEKSRERNRDHSRKSRLRKKEYVESLKMEVQQLQIYQQVCEYNQDLIXLVTAEPKAVFLFTSSSYARVLGYQGSQLIPGQASFLDLVHPSQV-AEVRSIFQKFSNIGDFKR---FRFRIRS-ADGEFFDAETSARVAEKGVVCSTRV 404          
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: PAS (domain-containing protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3GUL9_PHYRM)

HSP 1 Score: 68.9 bits (167), Expect = 8.440e-9
Identity = 50/147 (34.01%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 1327 KARRSREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLGA--SLLDLVEPKDAQAVVQAIMDTLSRGGIKQASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRI 1761
            K  +SRE+NRDHSR+SR RKK  +E LK     L  Y+ + EQ  D I++ +A A A F  +S A+ R LG++  +++    S LD+V P + Q V +A+   L+  G  +    ++R++  +  +    ET+ R+A + ++  TR+
Sbjct:  237 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAVFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEV-RAVFTKLNTLG--ETHRFKFRIKS-TDGEFFNAETTARLAEKGVVCSTRV 379          
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: PAS (domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUN5_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.580e-8
Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 1
Query: 1327 KARRSREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLGA--SLLDLVEPKDAQAVVQAIMDTLSRGGIKQASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRI 1761
            K  +SRE+NRDHSR+SR RKK  +E LK     L  Y+ + EQ  D I++ +A A A F  +S A+ R LG++  +++    S LD+V P + Q V +A+   L+  G  +    ++R++     +    ET+ R+A + ++  TR+
Sbjct:  248 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAIFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEV-RAVFTKLNTLG--ETHRFKFRIKS-MDGEYFNAETTARMAEKGVVCSTRV 390          
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Match: PAS (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD31_GLOUD)

HSP 1 Score: 67.0 bits (162), Expect = 3.840e-8
Identity = 51/147 (34.69%), Postives = 79/147 (53.74%), Query Frame = 1
Query: 1327 KARRSREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAFFALASGAFYRQLGFEPTKLLGA--SLLDLVEPKDAQAVVQAIMDTLSRGGIKQASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRI 1761
            K  +SRE+NRDHSR+SR RKK  +E LK     L  Y+ + EQ  D+I++   N DA F  +S A+ R LG++  +L+    S LDLV P++ Q V        + G  K+    Q+R++     +    ETS  +  + ++  TR+
Sbjct:  257 KEEKSRERNRDHSRKSRLRKKEFVESLKHEVSQLQIYQQICEQCLDLIAL--VNQDAIFMYSSAAYSRVLGYQGHQLIAGQTSFLDLVHPENVQEVRSVFQKFSALGESKK---FQFRIKSVEG-EYFRAETSACMTDKGVVCSTRV 397          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7968.16121.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
PAS2.800e-25377.07domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
PAS4.080e-21371.01domain-containing protein n=1 Tax=Ectocarpus silic... [more]
PAS1.250e-2446.71domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Multi-sensor8.770e-1742.74hybrid histidine kinase n=1 Tax=Ectocarpus silicul... [more]
PAS1.150e-1036.73domain-containing protein n=2 Tax=Nothophytophthor... [more]
PAS5.080e-934.01domain-containing protein n=1 Tax=Phytophthora pal... [more]
PAS5.410e-935.81domain-containing protein n=1 Tax=Pythium insidios... [more]
PAS8.440e-934.01domain-containing protein n=24 Tax=Phytophthora Ta... [more]
PAS1.580e-834.01domain-containing protein n=1 Tax=Peronospora effu... [more]
PAS3.840e-834.69domain-containing protein n=1 Tax=Globisporangium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7968contigE_fasciculatus_S2_contig7968:3806..7068 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score620.5
Seed ortholog evalue8e-175
Seed eggNOG ortholog2880.D8LJL9
Model size1800
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.PAS domain
EggNOG OGs2CNC0@1,2QV4B@2759
Ec32 ortholog descriptionBasic leucine zipper and PAS domain protein
Ec32 orthologEc-17_002510.1
Cds size1800
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7968.16121.1prot_E_fasciculatus_S2_contig7968.16121.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7968 3806..7068 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842456.6364698-CDS-E_fasciculatus_S2_contig7968:3805..39431696842456.6364698-CDS-E_fasciculatus_S2_contig7968:3805..3943Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7968 3806..3943 -
1696842456.6521509-CDS-E_fasciculatus_S2_contig7968:4212..43231696842456.6521509-CDS-E_fasciculatus_S2_contig7968:4212..4323Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7968 4213..4323 -
1696842456.6650774-CDS-E_fasciculatus_S2_contig7968:4801..49361696842456.6650774-CDS-E_fasciculatus_S2_contig7968:4801..4936Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7968 4802..4936 -
1696842456.6776512-CDS-E_fasciculatus_S2_contig7968:5156..53341696842456.6776512-CDS-E_fasciculatus_S2_contig7968:5156..5334Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7968 5157..5334 -
1696842456.69625-CDS-E_fasciculatus_S2_contig7968:5526..64051696842456.69625-CDS-E_fasciculatus_S2_contig7968:5526..6405Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7968 5527..6405 -
1696842456.709076-CDS-E_fasciculatus_S2_contig7968:6709..70681696842456.709076-CDS-E_fasciculatus_S2_contig7968:6709..7068Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7968 6710..7068 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7968.16121.1

>prot_E_fasciculatus_S2_contig7968.16121.1 ID=prot_E_fasciculatus_S2_contig7968.16121.1|Name=mRNA_E_fasciculatus_S2_contig7968.16121.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=600bp
DSTNTRQPKTSPPPPPRSLLPTRASSWASSPTAKLYEAGAPHQRQLLQPK
DRHDVAEVGSPALSGGVISSPSPEPYHPCSLPPLQQPHQQLQDVLDWPAS
PRLGGWQAPPSRAMSPMAASGPVVFSTEGDFLQSLQSTGGGNAAWEHEEG
STTTDNGSSDCSEDMDPVPLFPFHHKNPQNNGCTFEDSLQSLVEEVAGGG
GGVSNCFDLADAAAQAAAAAPSPTAIVPRAGGLQNLVFPAAAKAAAVAAA
KAGTAAAAIVPRGVLEKVSLGKQLLVSPGPSSQVVAAAAAAAAAPVSPPT
SPPQTQQGPKRRQRPAAAVGKPAKKVAGNGPKKQKKQPLQEQKNPSSPVQ
LKIKIARKTKALGTGTPEEGPANGGRPRKAARTAAVTLVAKNPPKSGGVR
KAAGRVGGSSTKRVKVSPSKGSPAPASSAVATGGDGDRFLDEKARRSREK
NRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSANADAF
FALASGAFYRQLGFEPTKLLGASLLDLVEPKDAQAVVQAIMDTLSRGGIK
QASCVQYRMRPPSSADAIEVETSFRIASRRLLAITRIVAAGVPRSVSPAQ
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mRNA from alignment at E_fasciculatus_S2_contig7968:3806..7068-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7968.16121.1 ID=mRNA_E_fasciculatus_S2_contig7968.16121.1|Name=mRNA_E_fasciculatus_S2_contig7968.16121.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3263bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7968:3806..7068- (Ectocarpus fasciculatus EfasUO2)
GATTCCACCAATACTAGGCAACCTAAAACATCACCCCCCCCCCCCCCGCG CTCTTTGTTGCCCACCAGGGCCTCGTCATGGGCATCGAGCCCGACCGCAA AGCTGTACGAAGCGGGCGCTCCGCACCAACGGCAGCTGTTGCAGCCAAAG GACCGGCATGATGTAGCCGAAGTGGGCTCTCCCGCGCTCTCGGGAGGCGT CATTTCGTCACCGTCGCCGGAACCGTACCACCCCTGCTCGCTGCCCCCGC TGCAGCAACCGCACCAGCAACTGCAGGATGTCTTGGACTGGCCCGCCTCT CCGCGCTTGGGAGGATGGCAGGCGCCGCCCAGCAGAGCTATGTCGCCGAT GGCCGCCAGGTAAAGGAAATAATAACGACTTTATTGTGGCGGTGTAGAGG CCTGCCGTTGAGTGTCGATTGTCTACCACATGCCGAAATGTGTTGGTTGG GCAGGTGTTGGTTTTTTTGTTTTGAAACGTTGGTGTTGGCCCTTTTTTTT TTTATCGTCGGGCGCGTAGTCGCCCTGTAGGGGTATACCCACTGAAAAGT GACCGAAGCATCAACTCCCCCAGTGGCGCAGAAACGACTCTCTTTTTAAA CGTCCACTGCGGTGTTTGTTGCCTGTCTCTCTTCTACGCACACCGACCGG AACACTTCAAAAGCGGCCCGGTCGTGTTTAGCACCGAGGGCGACTTCCTG CAGAGCCTGCAGAGCACCGGCGGCGGCAACGCCGCGTGGGAGCACGAGGA GGGAAGTACCACCACGGACAACGGCTCGTCCGACTGCTCGGAAGACATGG ACCCTGTCCCCCTCTTCCCTTTCCACCACAAAAACCCCCAAAACAACGGC TGCACCTTTGAGGACAGCTTGCAGAGCCTAGTCGAGGAGGTCGCAGGCGG CGGCGGGGGGGTGTCGAACTGCTTCGACCTGGCGGATGCAGCGGCGCAGG CAGCGGCCGCAGCCCCTTCGCCTACGGCTATCGTTCCCCGCGCAGGAGGA CTCCAGAATCTCGTCTTTCCCGCGGCGGCCAAAGCGGCAGCAGTAGCGGC AGCAAAGGCGGGCACGGCTGCTGCGGCGATCGTACCTCGGGGTGTCCTCG AGAAGGTTTCTCTAGGGAAGCAGCTCCTGGTATCGCCGGGTCCTTCCTCC CAGGTGGTGGCGGCGGCGGCGGCGGCGGCAGCAGCGCCGGTGTCTCCGCC CACTAGTCCTCCGCAAACGCAGCAAGGGCCGAAGCGGAGGCAGAGGCCGG CGGCGGCGGTCGGCAAGCCCGCCAAAAAGGTCGCCGGGAACGGACCGAAG AAGCAGAAGAAGCAGCCGCTGCAGGAGCAGAAGAATCCCAGCAGTCCCGT GCAGCTCAAGATCAAGATCGCAAGGAAGACCAAGGCGCTCGGAACTGGTA CCCCCGAAGAGGGCCCCGCGAACGGGGGGAGGCCGAGGAAGGCCGCTCGC ACGGCGGCGGTGACTTTGGTGGCTAAGAACCCGCCGAAGAGCGGCGGCGT CAGGAAGGCGGCCGGTCGCGTTGGGGGATCAAGCACAAAGAGGTGAGTCA GGGTGAAATGCTTAGCATGCGTGTGACCGCACAAGAACCCCTCCCGCTAT CTCGAGAGGAGGCGTGGTTAATGATCCATCTAATCGCCGAGACATGAAAA ACATGTGAATCTCCATTTTGGGAAGCAACAAAAACAGCGAAGAACCCCTC CCCCGCCGCGCGAACCCACTCATTCCTGTACCAGGGTCAAGGTGTCTCCG AGCAAGGGGAGCCCAGCACCGGCCTCCTCCGCCGTTGCCACCGGCGGGGA CGGCGACCGTTTCCTTGACGAAAAGGCCAGGCGCAGCCGGGAGAAGAACC GCGACCACAGCCGCAGGTCTCGGGAGCGGAAGAAGGCTCAGCTGGAGGGC CTGAAGCAGGCGGTGCGTTGCAAACCAATAATGCACACACATACACGCCT CGTAGCCCGGTCCGTTTGGAATTGATTGCACCCCCACCAATCGCCTTCTG CCCAAGCGGTTTTCTGTTGGGGTCCCCGTGGGAAGGTTACCTCAGTGGTT GAGCATGTCCTGGCGGCCCCCTTGTATCTTGGATTCTTCAATATCCATCC CGTTTCCGTTTGTCCCGTTACCGTACCATCAGTCGATCGACCTGGGCCCG TACCGCATGCTCGTGGAGCAAGCGCACGACATGATCTCCGTGCACTCCGC CAACGCCGATGCCTTCTTTGCGCTGGCCTCCGGAGCCTTCTACCGGCAGC TCGGATTCGAACCCACGGTGAGACAGTTCAGGCGGCGCAATAGATACCGC TACAAACGTATTGTCTCGCGCTCACCGCAAGGGTTTGGACACAACCGCGT CGTTGTAATACCTCGAACGGGTTGTCTTGCTGTGATTATTAATTGTACGG TACAAAGAGACTCAAAATAGAAGTAGTGGGTAAAGAAATAGAGAAGGTAA AAGATGTGAGACCTCGCCGATGGCCCGGACAGCTTCGAAATGTACCCACA CATGAAATGCAGCCCTAATGAACGGAGACCGGTTTTAACGTGAAGATGGC AACAACAACAATGATAGCTCGGACACGTGTAAAGGGGGAAGCCGATCTGC TCCTATAGGCACACGATACAAGGACTCCGCGCCGGCCTCAGTTCGCTTCC GTGCATCGCGTGGGCATGAGACTTCCATCTCCATGTCTCCGCCAATACCC TAACCCTTGCGTCTGTCTGCTGACCTCCTGTCCTGCTGAGCGCAGAAGCT GTTGGGCGCGTCGCTGCTTGACCTGGTAGAGCCCAAGGACGCGCAGGCCG TGGTCCAAGCCATCATGGACACCCTCAGCCGCGGAGGAATCAAGCAGGCA AGCTGCGTAGTCTTTACCACCCTGGTATTTCGTGCTTGCCATGACGTGCA CACGCCACCCGCCCGTGACGAAGAAGTTAGGAAACGGCAAGTGACGCAAC ACGAGCAGAAGAAAAACACCCGGGCCATTTGAAGTGAAAATGCGCTCAAG AACGTTTTTTTTTTTTAACGTATCGCAACTACCTGATGTCATGTGATGGA AAAGCACACACCCAACCAGACAAGACAGCCTAAAGACCCCCCACCCCCAC CCACGCCCCCGCGCGGCGCTAACAGGTTCAGTACCGAATGCGCCCCCCCA GCAGTGCCGACGCCATCGAAGTGGAAACCTCCTTCCGCATCGCGTCCAGG CGCCTCCTGGCCATCACGAGGATCGTGGCCGCCGGCGTCCCTCGCTCCGT GTCCCCGGCCCAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7968:3806..7068-

>mRNA_E_fasciculatus_S2_contig7968.16121.1 ID=mRNA_E_fasciculatus_S2_contig7968.16121.1|Name=mRNA_E_fasciculatus_S2_contig7968.16121.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1800bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7968:3806..7068- (Ectocarpus fasciculatus EfasUO2)
GATTCCACCAATACTAGGCAACCTAAAACATCACCCCCCCCCCCCCCGCG
CTCTTTGTTGCCCACCAGGGCCTCGTCATGGGCATCGAGCCCGACCGCAA
AGCTGTACGAAGCGGGCGCTCCGCACCAACGGCAGCTGTTGCAGCCAAAG
GACCGGCATGATGTAGCCGAAGTGGGCTCTCCCGCGCTCTCGGGAGGCGT
CATTTCGTCACCGTCGCCGGAACCGTACCACCCCTGCTCGCTGCCCCCGC
TGCAGCAACCGCACCAGCAACTGCAGGATGTCTTGGACTGGCCCGCCTCT
CCGCGCTTGGGAGGATGGCAGGCGCCGCCCAGCAGAGCTATGTCGCCGAT
GGCCGCCAGCGGCCCGGTCGTGTTTAGCACCGAGGGCGACTTCCTGCAGA
GCCTGCAGAGCACCGGCGGCGGCAACGCCGCGTGGGAGCACGAGGAGGGA
AGTACCACCACGGACAACGGCTCGTCCGACTGCTCGGAAGACATGGACCC
TGTCCCCCTCTTCCCTTTCCACCACAAAAACCCCCAAAACAACGGCTGCA
CCTTTGAGGACAGCTTGCAGAGCCTAGTCGAGGAGGTCGCAGGCGGCGGC
GGGGGGGTGTCGAACTGCTTCGACCTGGCGGATGCAGCGGCGCAGGCAGC
GGCCGCAGCCCCTTCGCCTACGGCTATCGTTCCCCGCGCAGGAGGACTCC
AGAATCTCGTCTTTCCCGCGGCGGCCAAAGCGGCAGCAGTAGCGGCAGCA
AAGGCGGGCACGGCTGCTGCGGCGATCGTACCTCGGGGTGTCCTCGAGAA
GGTTTCTCTAGGGAAGCAGCTCCTGGTATCGCCGGGTCCTTCCTCCCAGG
TGGTGGCGGCGGCGGCGGCGGCGGCAGCAGCGCCGGTGTCTCCGCCCACT
AGTCCTCCGCAAACGCAGCAAGGGCCGAAGCGGAGGCAGAGGCCGGCGGC
GGCGGTCGGCAAGCCCGCCAAAAAGGTCGCCGGGAACGGACCGAAGAAGC
AGAAGAAGCAGCCGCTGCAGGAGCAGAAGAATCCCAGCAGTCCCGTGCAG
CTCAAGATCAAGATCGCAAGGAAGACCAAGGCGCTCGGAACTGGTACCCC
CGAAGAGGGCCCCGCGAACGGGGGGAGGCCGAGGAAGGCCGCTCGCACGG
CGGCGGTGACTTTGGTGGCTAAGAACCCGCCGAAGAGCGGCGGCGTCAGG
AAGGCGGCCGGTCGCGTTGGGGGATCAAGCACAAAGAGGGTCAAGGTGTC
TCCGAGCAAGGGGAGCCCAGCACCGGCCTCCTCCGCCGTTGCCACCGGCG
GGGACGGCGACCGTTTCCTTGACGAAAAGGCCAGGCGCAGCCGGGAGAAG
AACCGCGACCACAGCCGCAGGTCTCGGGAGCGGAAGAAGGCTCAGCTGGA
GGGCCTGAAGCAGGCGTCGATCGACCTGGGCCCGTACCGCATGCTCGTGG
AGCAAGCGCACGACATGATCTCCGTGCACTCCGCCAACGCCGATGCCTTC
TTTGCGCTGGCCTCCGGAGCCTTCTACCGGCAGCTCGGATTCGAACCCAC
GAAGCTGTTGGGCGCGTCGCTGCTTGACCTGGTAGAGCCCAAGGACGCGC
AGGCCGTGGTCCAAGCCATCATGGACACCCTCAGCCGCGGAGGAATCAAG
CAGGCAAGCTGCGTTCAGTACCGAATGCGCCCCCCCAGCAGTGCCGACGC
CATCGAAGTGGAAACCTCCTTCCGCATCGCGTCCAGGCGCCTCCTGGCCA
TCACGAGGATCGTGGCCGCCGGCGTCCCTCGCTCCGTGTCCCCGGCCCAG
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