mRNA_E_fasciculatus_S2_contig7967.16120.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7967.16120.1
Unique NamemRNA_E_fasciculatus_S2_contig7967.16120.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: Polyribonucleotide (nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGU0_ECTSI)

HSP 1 Score: 492 bits (1267), Expect = 1.710e-166
Identity = 275/305 (90.16%), Postives = 282/305 (92.46%), Query Frame = 1
Query:    1 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTLRGGGRXXXXXXXXRSSRGVPRDFNTTAIIGSTYRDCEVVSIQPFGAFVEFAPGLEGLVHVSELDVNRVVSAEGFLADKTTIDVKVIGLNDKGKVRLSRKAVLMDERGGNAXXXXXXXXTPPGRKRPNGALASGGALGVVKRAAPAAAKPKAAGVAKTGVPLSAAVEGPAAGGGEGETPKKGG 915
            GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEM+KAQPDGPRK+ISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMIS+FNSTSAASAVKYIEEMLKD+TLRGGG XXXXXXXXRSSRGVP DFN TAIIG+TYRDCEVVSIQPFGAFVEFAPGLEGLVHVSELDVNRVV+AEGFLADK  IDVKVIGLNDKGKVRLSRKAVLMDERGG A        +PP RKRPNGALASGGALGVVKRAAPAAA PK  G AK GV LSAAVEGPA GGGEGE PKKGG
Sbjct:  533 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMQKAQPDGPRKEISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISAFNSTSAASAVKYIEEMLKDVTLRGGGXXXXXXXXXRSSRGVPADFNATAIIGTTYRDCEVVSIQPFGAFVEFAPGLEGLVHVSELDVNRVVTAEGFLADKPAIDVKVIGLNDKGKVRLSRKAVLMDERGGKAGGAAVP--SPP-RKRPNGALASGGALGVVKRAAPAAATPKTVGAAKEGVALSAAVEGPAGGGGEGEAPKKGG 834          
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: Polyribonucleotide (nucleotidyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC49_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.000e-54
Identity = 111/232 (47.84%), Postives = 149/232 (64.22%), Query Frame = 1
Query:    4 ITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTLRGGGRXXXXXXXXRSSRGVPRDFNTTAI----IGSTYRDCEVVSIQPFGAFVEFAPGLEGLVHVSELDVNRVVSAEGFLADKTTIDVKVIGLNDKGKVRLSRKAVLMDER 687
            ITTFQ+DIKC GLT ALL +AL QAK GRLHILGEM KA  + PR  +S + P  ++  V  D IG+IIGPGGK IRQIIE+F+L  +++ EDG V +SS ++ +   A ++I+ +  +    GGGR        R  +  P            IG  YR+C V  +  FG FVE A GLEGLVHVSELD+ R+ S EGF+     +DVK++G+N+KG++RLSRKA + ++R
Sbjct:  463 ITTFQMDIKCEGLTIALLTKALAQAKEGRLHILGEMAKALAE-PRPTLSKWAPIFSVFKVPLDSIGRIIGPGGKQIRQIIEEFALGNVEIAEDGTVFVSSMDADANERASRFIQALAGEA---GGGRGSRNGG--RDQQRAPAXXXXXXAEKPEIGKVYRECVVKGVHNFGCFVEIATGLEGLVHVSELDMQRIRSVEGFVNVGDKLDVKLLGMNEKGQLRLSRKAAMAEDR 688          
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: Polyribonucleotide (nucleotidyltransferase (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZW0_9STRA)

HSP 1 Score: 187 bits (474), Expect = 7.880e-50
Identity = 119/242 (49.17%), Postives = 152/242 (62.81%), Query Frame = 1
Query:    1 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTLRGGGRXXXXXXXXRSSRGVPRDF-NTTAIIGSTYRDCEVVSIQPFGAFVEF--------APGLEGLVHVSELDVNRVVSAEGFLADKTT--IDVKVIGLNDKGKVRLSRKAVLMDERGG 693
            GITTFQLDIKC GLT   + RAL QA+ GRLHIL EM+   P+ PR D+   VP      +  + IGK+IGPGGK IR IIEDF L  M+V+E+G + I++ NST    A K+I+E++K      GGRXXXXXXXX   R     +    A+ G+ Y+  ++  +  FG FVE          PGLEGL HVSEL V RV + +GF+A   T  I+VK +G ND+GK++LSRKAVL D  GG
Sbjct:  670 GITTFQLDIKCEGLTVDTMERALEQARLGRLHILDEMDSVLPE-PRADLPDTVPKIAQFGIPEENIGKVIGPGGKQIRAIIEDFELTNMNVDEEGSIQITAMNSTKMEMAEKFIQELIKG---DSGGRXXXXXXXXXXPREARAQYVGPDAVEGTVYKG-KITGVHDFGVFVEILPGAEDGSTPGLEGLCHVSELHVERVRNIQGFVASMNTEEIEVKYLGKNDRGKIQLSRKAVLEDRMGG 906          
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: Polyribonucleotide (nucleotidyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=I2CR07_NANGC)

HSP 1 Score: 181 bits (458), Expect = 9.280e-48
Identity = 106/229 (46.29%), Postives = 144/229 (62.88%), Query Frame = 1
Query:    1 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTLRGGGRXXXXXXXXRSSRGVPRDFN-TTAIIGSTYRDCEVVSIQPFGAFVEFAPGLEGLVHVSELDVNRVVSAEGFLADKTTIDVKVIGLNDKGKVRLSRKAVLMDE 684
            G+TTFQLDIKC GLT   L +AL QAK GRLHIL  ME+A P  PR ++   V   + + ++P  IGK+IGP G+ IR II+ FSL  +DV + G V + SF++ S  +A K+IE+M KD                ++S  V  +F      +G+ +RD E+  IQ FG FVE  PGL+GLVHVSEL+  RVVS E        +DVK++G+N+KG++RLSRKA+L +E
Sbjct:  579 GVTTFQLDIKCNGLTFPTLEKALRQAKEGRLHILKIMEEACP-APRAEMRGNVMRISQVKINPSFIGKLIGPQGRQIRAIIDQFSLSELDVSDQGVVSVCSFSTESNQAAAKFIEDMYKD--------------EVKASNTV--EFKGPMPEVGTVFRDVEIKGIQSFGVFVEILPGLQGLVHVSELNNKRVVSVEALYKSGDRVDVKLLGINEKGQLRLSRKAILEEE 790          
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: Polyribonucleotide (nucleotidyltransferase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VD11_9STRA)

HSP 1 Score: 176 bits (446), Expect = 5.710e-46
Identity = 113/239 (47.28%), Postives = 145/239 (60.67%), Query Frame = 1
Query:    1 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTLRGGGRXXXXXXXXRSSRGVPRDFNTTAIIGSTYRDCEVVSIQPFGAFVEF--------APGLEGLVHVSELDVNRVVSAEGFLADKTT--IDVKVIGLNDKGKVRLSRKAVLMDER 687
            GITTFQ+DIKC GLT   + RAL QAK GR+HIL +ME+    GPR+++ P +P      +  D IGK+IGPGGK IR +IEDF L  M+VEEDG++ I+S ++     A  +I E++   T  GGGRXXXXXXXX      P      A+ G  Y+  ++  I  FG FVE          PGLEGL HVSEL   RV + EGF+       ++VK IG N KG+++LSRKAV  D R
Sbjct:  698 GITTFQMDIKCEGLTIKTMERALQQAKEGRMHILDKMEEVLA-GPREELPPTIPRINTFMIPADSIGKVIGPGGKQIRAVIEDFELINMNVEEDGKIQITSLDTKKMKKAESFIMELI---TKAGGGRXXXXXXXXXXREPRPAYVGPDAVEGQVYKG-KITGIHQFGVFVEILPGAEDGSTPGLEGLCHVSELHYERVRNCEGFIKSMGVEELEVKYIGKNAKGQLQLSRKAVQEDRR 931          
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: Polyribonucleotide (nucleotidyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V6X3_9STRA)

HSP 1 Score: 170 bits (430), Expect = 8.640e-46
Identity = 105/245 (42.86%), Postives = 138/245 (56.33%), Query Frame = 1
Query:    1 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTL-----RGGGRXXXXXXXXRSSRGVPRDFNTTAIIGSTYRDCEVVSIQPFGAFVEFAPG--------LEGLVHVSELDVNRVVSAEGFLADKTT--IDVKVIGLNDKGKVRLSRKAVLMDERG 690
            GIT FQLDIKC GLT   + +AL QA+ GRLHIL EMEK   D PR D+ P VP   I S++ D IGK+IGPGGK IR +IEDF L  MDV+EDG + IS  +S    +A +++  ++          RGG R        R     P       + G      ++  I  FG F+E  PG        LEGL HVSEL + RV + EGF+    T  ++VK +G+N KG+V+LSR+   M+E+G
Sbjct:  177 GITAFQLDIKCEGLTLETMAKALEQARQGRLHILDEMEKVL-DNPRSDLPPTVPKMRIFSINEDSIGKVIGPGGKQIRAVIEDFELTNMDVQEDGTIQISGMSSEKLKAAEEFVNNLVAGXXXXXXXXRGGKREP------RPKYVGPMPEEGAILTG------KITGIHQFGVFLEIMPGAEDGSTPALEGLCHVSELHIERVRNCEGFVGSMNTETLEVKFLGINAKGQVQLSRRQA-MEEKG 407          
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RUF2_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.030e-45
Identity = 101/240 (42.08%), Postives = 139/240 (57.92%), Query Frame = 1
Query:    1 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTLRGGGRXXXXXXXXRSSRGVPRDFNTTAIIGSTYRDCEVVSIQPFGAFVEF--------APGLEGLVHVSELDVNRVVSAEGFL--ADKTTIDVKVIGLNDKGKVRLSRKAVLMDERG 690
            GITTFQLDIKC GLT  ++ RAL QA+ GR+HIL EME+  P   R ++   VP      ++ D IGK+IGPGGK IR IIEDF L  M+V E+G + ++S ++     A  ++ E+L+    RGGG               P +       G TY   ++  I  FG F+E         +PGLEGL H+SELD  R+ + EGF+   +  T++VK  G N KG+++LSRKAVL ++RG
Sbjct:   91 GITTFQLDIKCEGLTIDIMQRALGQAREGRIHILNEMEQHLPTS-RAELPTTVPRIQSFQIEADLIGKVIGPGGKQIRAIIEDFELTNMNVGEEGLIQMTSMDTEKLKLAQAFVTELLEKSDRRGGGDKKGGGPRAEYKGPPPEE-------GKTYV-AKITGIHQFGVFLEILPGAEDGSSPGLEGLCHISELDTQRIRNCEGFVNSLNVETLEVKYKGKNQKGQLQLSRKAVLEEKRG 321          
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: Polyribonucleotide (nucleotidyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIU5_FISSO)

HSP 1 Score: 170 bits (431), Expect = 4.080e-44
Identity = 106/240 (44.17%), Postives = 142/240 (59.17%), Query Frame = 1
Query:    1 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTLRGGGRXXXXXXXXRSSRGVPRDFNTTAIIGSTYRDCEVVSIQPFGAFVEF--------APGLEGLVHVSELDVNRVVSAEGFLADKTT--IDVKVIGLNDKGKVRLSRKAVLMDERG 690
            G+TTFQLDIKC GLT   + RAL QA+ GRLHIL EM+K     PR ++ P VP     +V  + +GKIIGPGGK IR IIEDF L  MDV++DG++ +SSFN+     A +++  ++K     GGG+        R+    P       + G TY   ++  I PFG FVE          PGLEGLVHVSEL  +R+ + EG++       + VK +G+ +KGK+RLSRKAVL +  G
Sbjct:  569 GVTTFQLDIKCEGLTFETMQRALEQARQGRLHILDEMDKVL-SAPRAELPPTVPKIMSFTVPSESLGKIIGPGGKQIRAIIEDFELTNMDVKDDGKIQVSSFNAQKMKEAEEFVMNLIKG-GAGGGGKTE------RAKYAGP-----DPVEGETYTG-KITGIHPFGVFVEILPGSEDGSTPGLEGLVHVSELARDRIRNCEGYIKSLGVEELTVKYLGV-EKGKIRLSRKAVLEEPNG 793          
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: S1 (motif domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QYE1_THAOC)

HSP 1 Score: 163 bits (413), Expect = 4.560e-44
Identity = 116/242 (47.93%), Postives = 147/242 (60.74%), Query Frame = 1
Query:    1 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTLRGGGRXXXXXXXXRSSRGVPRDFNTTAIIGSTYRDCEVVSIQPFGAFVEFAPG--------LEGLVHVSELDVNRVVSAEGFLADKT--TIDVKVIGLNDKGKVRLSRKAVLMDERGGN 696
            GITTFQLDIKC GLT   + RAL QAK GR+HILGEMEKA  + PR ++ P VP   ++ +  D IGK+IGPGGK IR +IEDF L  ++V+E G V IS ++    AS ++  +EM+  LT   G  XXXXXXXXR  R  P         G  Y   ++  I  FG F+E  PG        LEGL HVS+L V RV + EGF+      T++V   G N++GK +LSRKAVL + RG N
Sbjct:  106 GITTFQLDIKCEGLTLETMARALHQAKEGRIHILGEMEKALAE-PRGELPPTVPKVIMVKISEDSIGKVIGPGGKQIRALIEDFGLSNINVDESGEVQISGYD----ASQMEKAKEMILKLT--SGXXXXXXXXXXREPR--PEYAGPPPEEGKVYEG-KITGIHNFGVFLEILPGAEDGSTPALEGLCHVSQLHVERVRNCEGFVRSMNVETLEVMYQGKNNQGKHQLSRKAVL-ESRGVN 336          
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CW16_CYCTE)

HSP 1 Score: 158 bits (400), Expect = 1.250e-43
Identity = 103/237 (43.46%), Postives = 132/237 (55.70%), Query Frame = 1
Query:    1 GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDISPFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMISSFNSTSAASAVKYIEEMLKDLTLRGGGRXXXXXXXXRSSRGVPRD--FNTTAIIGSTYRDCEVVSIQPFGAFVEF--------APGLEGLVHVSELDVNRVVSAEGFLADKTTIDVKV--IGLNDKGKVRLSRKAVL 675
            GITTFQLDIKC GLT   + +AL QA+ GRLHIL EM KA  + PR ++   VP      V P+ +GKIIGPGGK IR IIEDF L  MDV++ G V +S  +S +   A +++  ++ D    G G            RG  R         +G  Y   ++  I  FG FVE          PGLEGL HVSEL   RV + E F+    T DVKV  +G+N+KG++ LSRKAV+
Sbjct:   20 GITTFQLDIKCEGLTLETMEKALEQAREGRLHILDEMAKALAE-PRPELPATVPKIASFKVRPELLGKIIGPGGKQIRAIIEDFGLQNMDVDDSGLVQVSGMDSKNLTKAEEFVMALIAD----GKGE----------QRGAERKKYVGPEPEVGKIYEG-KIKGIHRFGIFVEILPGAEDGSTPGLEGLCHVSELHTERVRNCEAFVNSWGTTDVKVKYLGVNEKGQIVLSRKAVM 240          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7967.16120.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Polyribonucleotide1.710e-16690.16nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=28... [more]
Polyribonucleotide2.000e-5447.84nucleotidyltransferase n=1 Tax=Tribonema minus Tax... [more]
Polyribonucleotide7.880e-5049.17nucleotidyltransferase (Fragment) n=2 Tax=Odontell... [more]
Polyribonucleotide9.280e-4846.29nucleotidyltransferase n=2 Tax=Monodopsidaceae Tax... [more]
Polyribonucleotide5.710e-4647.28nucleotidyltransferase n=2 Tax=Chaetoceros debilis... [more]
Polyribonucleotide8.640e-4642.86nucleotidyltransferase n=1 Tax=Ditylum brightwelli... [more]
Hypothetical1.030e-4542.08protein n=1 Tax=Eucampia antarctica TaxID=49252 Re... [more]
Polyribonucleotide4.080e-4444.17nucleotidyltransferase n=2 Tax=Fistulifera solaris... [more]
S14.560e-4447.93motif domain-containing protein n=1 Tax=Thalassios... [more]
Hypothetical1.250e-4343.46protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7967contigE_fasciculatus_S2_contig7967:121..4966 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score496.5
Seed ortholog evalue8.8e-138
Seed eggNOG ortholog2880.D8LGU0
Preferred namePNP1
Model size918
KEGG rclassRC02795
KEGG koko:K00962
KEGG ReactionR00437,R00438,R00439,R00440
KEGG Pathwayko00230,ko00240,ko03018,map00230,map00240,map03018
KEGG ModuleM00394
Hectar predicted targeting categoryother localisation
GOsGO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006109,GO:0006139,GO:0006396,GO:0006401,GO:0006629,GO:0006720,GO:0006721,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008299,GO:0008408,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009267,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010322,GO:0010323,GO:0010467,GO:0010563,GO:0010565,GO:0010675,GO:0010677,GO:0015994,GO:0015995,GO:0016036,GO:0016070,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016119,GO:0016120,GO:0016122,GO:0016123,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0018130,GO:0019216,GO:0019220,GO:0019222,GO:0019438,GO:0019439,GO:0019747,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031425,GO:0031667,GO:0031668,GO:0031669,GO:0033013,GO:0033014,GO:0033554,GO:0034641,GO:0034655,GO:0042214,GO:0042440,GO:0042594,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045827,GO:0045833,GO:0045912,GO:0045936,GO:0046148,GO:0046246,GO:0046483,GO:0046700,GO:0046890,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051055,GO:0051174,GO:0051186,GO:0051188,GO:0051716,GO:0062012,GO:0062014,GO:0065007,GO:0071071,GO:0071072,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903725,GO:1903726
Exons5
EggNOG free text desc.polyribonucleotide nucleotidyltransferase activity
EggNOG OGsCOG1185@1,KOG1067@2759
Ec32 ortholog descriptionPolyribonucleotide nucleotidyltransferase, RNA-binding domain
Ec32 orthologEc-28_001180.1
EC2.7.7.8
Cds size918
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842456.550456-CDS-E_fasciculatus_S2_contig7967:120..3241696842456.550456-CDS-E_fasciculatus_S2_contig7967:120..324Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7967 121..324 +
1696842456.5654523-CDS-E_fasciculatus_S2_contig7967:1268..13901696842456.5654523-CDS-E_fasciculatus_S2_contig7967:1268..1390Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7967 1269..1390 +
1696842456.5784023-CDS-E_fasciculatus_S2_contig7967:2841..29851696842456.5784023-CDS-E_fasciculatus_S2_contig7967:2841..2985Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7967 2842..2985 +
1696842456.5895805-CDS-E_fasciculatus_S2_contig7967:4032..41711696842456.5895805-CDS-E_fasciculatus_S2_contig7967:4032..4171Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7967 4033..4171 +
1696842456.6005163-CDS-E_fasciculatus_S2_contig7967:4657..49661696842456.6005163-CDS-E_fasciculatus_S2_contig7967:4657..4966Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7967 4658..4966 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7967.16120.1prot_E_fasciculatus_S2_contig7967.16120.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7967 121..4966 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7967.16120.1

>prot_E_fasciculatus_S2_contig7967.16120.1 ID=prot_E_fasciculatus_S2_contig7967.16120.1|Name=mRNA_E_fasciculatus_S2_contig7967.16120.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=306bp
GITTFQLDIKCAGLTTALLGRALTQAKAGRLHILGEMEKAQPDGPRKDIS
PFVPTATIMSVDPDQIGKIIGPGGKIIRQIIEDFSLDGMDVEEDGRVMIS
SFNSTSAASAVKYIEEMLKDLTLRGGGRGGAGGGGGRSSRGVPRDFNTTA
IIGSTYRDCEVVSIQPFGAFVEFAPGLEGLVHVSELDVNRVVSAEGFLAD
KTTIDVKVIGLNDKGKVRLSRKAVLMDERGGNAGGGAAAAPTPPGRKRPN
GALASGGALGVVKRAAPAAAKPKAAGVAKTGVPLSAAVEGPAAGGGEGET
PKKGG*
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mRNA from alignment at E_fasciculatus_S2_contig7967:121..4966+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7967.16120.1 ID=mRNA_E_fasciculatus_S2_contig7967.16120.1|Name=mRNA_E_fasciculatus_S2_contig7967.16120.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4846bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7967:121..4966+ (Ectocarpus fasciculatus EfasUO2)
GGAATCACCACGTTCCAGCTGGACATCAAGTGCGCCGGCCTCACCACGGC CCTCCTCGGGCGCGCCCTGACCCAGGCCAAGGCCGGGCGTCTTCACATCC TGGGGGAGATGGAGAAGGCCCAGCCAGACGGCCCGAGGAAGGACATCTCC CCCTTCGTGCCGACCGCGACCATCATGAGCGTGGACCCTGACCAGATCGG AAAGGTACAAAATGAACATATGGGGGTCATTGGCTTGGTGGTTTTTGTCA GCTGCGAGTTTTGTGTTTCTCATCGATTTTTTCGGATTGGTATGACTTGC GATTTTCTATCCCTTGCGCTGCGGTTTTGCGTTTCCCGGCATTTTTTCAG GTTGATGGCCGTCCTTTTATTTTACCCGTAAAGCTGCGGTGTTTGTGTTT CTCAATGATAATGTGACCGTGGGCTTGTGCTGGTGCTTGGCAGATCTCAC CGTTTGTCGCTCGTAACAACGAGCAGTGTTCCTCTGTCGCGAGTGTCTGT CTCTCTTTCGTCTCTCTCTATCTACCATCGCTCTCGCTAACAGAGGTCAG CAAGTCACTTTTGCAACTCGGGCGGGTATCGTTCTGAACAGTGCCCTGTG CCTCTAAGTCCTTTGTGTAGTTCTACAGCAGTAGGCAGGCATGTGTTCAT GAAATTGGCGACCTGTTTTTTACTCATTTTTTCTCGGGGCCTAGGCCTAA AAGGACGGCCTGCCTTCTCCCGGATGGTGCCTTACGCCAAGCCTCAAACA TTCGTATTGCAGAACTCGAGGATTGGGCAGAGAGATATCTGCATCTACTG TTGTTGCTCTTCGCGTCGCCCAGCCGTTTTTATTTTTATTTTTATGCTTG CACTCGAAAAATCGTCTCAACTGAGCGACGTCAGCGTAGGCGCAAGGGTA GCTCCAAGCGCTGTCAAGCCCAGTCTGCTCATGAAACGTGGGATTCATGG TGTGTTTCTATGCTATGTTTCGAGCACGCCGGTCTGTCAGCCGGTTCCTG TTCCGTGCTCGCCCTTGCTTTTTGAGTGTGTTGTGCAGAACCTTGCGTAC TCGCAACTCTGTTTTTTGTGTTTCGCCGTGTGTAAACATTTTTTTTCTTG TTTTTCCCTTTCCATGCTCTTTTCGTTGGTCGGCCGTCCCCTCTCAAGAT CATCGGCCCGGGAGGCAAGATTATCCGCCAGATCATCGAAGACTTTTCGC TCGACGGCATGGATGTTGAGGAGGACGGTCGAGTCATGATTTCCTCTTTC AACAGCACCAGCGCTGCAAGGTGAGGCATTTTCTTTTTTCGGTGGATTTT TTATCTGTATACAAGGCATCCCTTCGGGACGTGGGTGACAGGCCTCCCGC GGGTGACTCAAGACCACATGCATAATGCGCATTGCCCGAAGAGGGACTGC TGTGTGTCTCATAACGCTCGTACTCCTCACAAAAAATCGCGCACGTTGTT ATATTCTACATTGGAGCCAGCTCGAGCGGAAAATGTTTTGCTGGCGAATT ATCAGACTTCTGTGATGTGTTTGACTGATGATGAGGCAGGTTCCGATGAG AATCGAATTTGAAGCCGAAACAACACCACAGAAAAAACATACTCAACACT GCAGATACATGCTCTAGGACTTGTCTACAACAGCAGCGCTTCGCTTCGTT GGCCCGCTGCGAAGGTACTCTTGGACAGCAGTGATGACACGACGAGTCAC GGGGATGTGGAGTCAGCGAATGAATGATGGACTGGTGTGGAGATGAACAA GCAAGAGGCAATGTTAATGTTTTAACCGCCGTTGCTGGGTTTTAGAACGG TTCGCCAGGCTTTGTCGTCGCGGAACGCGTCCCCTGGGTTTTGAGCCAGT TTTCGCAACTTTGACCGTCAACCACATGCATGCGCCACGAATGCCCGCCG AGCTCCGGGCACGGGCGACTATGTACGCACGAGCCTCCTGCGTACCCCTG AGAAGGAATTACGAGAAGAGACTCGCTTCTTCGAGAGAAAGAAATGCCGA GGCATGAAAAGTGACCAAATCTAGTATGTACATACATGTATTTTTCCTTG GCATGTTTTATTTTTGGCGCGAGCGCAGTCGTTCCCTTGCATACTCGACC GAACTTCTCCGTCAATAAGTTCACTCCTCAAGTGTTCTTTCAGCAAATGG TACATTAGCATTCAACAGCAAGCAGCAAGCACTAATTAAACGTCGTCGCG TCGCGAGGTTGTGGCTGTTCTGGTCGCTGTCGTCAAGTGAAGAAACGTTC CGATCTCTGCTCGGTGCCTTCCCGGGTCCAACTGGCGCAGACGCCTTCAG CAATCACAAACTAATACTATCAAAGAGAAAGAAGCAGTATCAACGATACA ATAGCAATATCAAACAGAAGGAAGCTGGCATCCAAAAAGGCGATAGAAGC ACGCAGAAAGTCAAAACAAGCGTACTAGCGCAACAACTCAAAAGTAAAGC CCTAGATGGTTGCGTAGTCGACATGTCGGACAGGGGGAGAAGCTACAGAA ATGCCAGACGCAGGAGGAAGAACCGAAACTTGATATATGAAGTGAGAACA CCAAATCCAATGAAATGTTCTCCAAAACCAACTAAATGAAGTATTCTGCG AAACAGTTTGTCGCCACATTAGACATTAGGTGCCCAACGTCGCCTCATCT CTCTCTCTGTCTGCATCTCTGTCTGCATCGCTCTCTCTCTCTCTCTCATT ATCGCTTTCATTCTCTCGCAGCGCCGTCAAGTACATCGAAGAAATGCTCA AGGACCTGACGTTGCGTGGGGGGGGGAGGGGAGGCGCCGGGGGCGGCGGC GGCCGGTCCTCGCGCGGGGTGCCTCGCGACTTTAACACGACCGCGATCAT CGGCTCCACCTACAGGTGATATCTACTTTTTTTTAATTCTGGACCAAGGA ATATAACATGTGTATTTTCTTAGAAAACAGCGGCGAGAAACCTTCGAAGA ACGCCAGTCGGGGACATGTTTTTTTTTTTTTGCAGACCGAGAAAAGCGGC CTGCTTTTTTCGTCTTTCTTCTTTTTTTGGTAGTGCTTTCTTCCCTCTCA AACCCTAACTCTTCTCGGACGCATTTGCTGCCAAGCGCTTTAGAGTCCGT TTTTTTTTTGTCTACATACAAGACGGAGATGTTTAGGAGAGGGTCTTCTA GCCATTTGTTTTTGCTCTAATCTCACCGGCCCTTCATTTTTATCACGAAC ACAAGCAGCTCATCCACACCTTTCATTTCCTCCCTTGTGTTTTTCAATAT ATGCTACCAAAGCCATAAGTTGAAAGTTAACGATTAACTTGTTGATCACC CACACGAACTGAAAATCGTAAAGTCCGGTCGGCGAATGGGAAAACAACAA CAAAAAAAGACGCTACGGGAGATTCGAACTCCCGACCTCTACCACCCTAA GGTAGAATCATAGCCAACTAGACCAGCAGCGCCGGCCGTTTCCCGACGGC GGTGATTATGCACCAAATTATCGTCCTTCTCACCGTGTATACTTTGAAAT TTCCTCTTGAGTTCCCCTGCCCCTTTTCCCTCAAAGTATACGCACGTGCA GAAAATGCGAAATTTATCCGTGTTTTTCCCGTACTCTTTATTATCAATAC CCCCTTATGCCATACCCCTCCCTGCCTCTGCACCGCGCTCACACGAAGAA AAAAAAATAGTTTGTATTTTCATTTTACGTGTTACCCCCGCTTTCGTTAC CCCTTGTAGCAGTTCTCTATCAAAGCTCCCCCCACAAAGCACCAACGGCG TGGGTCCCCAGCCCCGAGTACGTCATTTCGTCACCTTGACCGTCGCAAAC GACTCACTCGGGAACCGCGAGGTATCTATCTTCCATCGGTGATGATGCCT TCCTTCTCTTGTGCCTGTTGCCCCACCTGCCGCTGCCGATTCCCACCCCA CCCCCCCCAAAGGGATTGCGAGGTGGTATCCATCCAGCCGTTCGGCGCGT TCGTGGAGTTCGCGCCCGGGCTGGAGGGCCTCGTGCACGTGAGCGAGCTG GACGTGAACCGCGTGGTGTCGGCGGAGGGGTTCTTGGCGGACAAGACGAC GGTAAGAGGATATGTATGCGGTATGCGGTATGCGGTATGCGGTATGCGGT ATGCGGTATGCGGTATGCGGCGGCGGCGTCGCCTGTCTGTCTGTCTGCAT CTCCCTCCCTGTGGGCTGCATGCAACACATCCCGCCCGCGTGCGTGCGGG TCTTCCTCTCTCGGACGCAACGCTTGTTGTTTCGTTTCTTTGTAGGGGGG CTACGGAGGCCGTACATCCCTCCCCATCGTGCCGTTCACTTATTTAGTTT TTCCGGCTCGTTATTTTCGTCCGCTTGATTGTGTCAGCTCGCACCTCTCG TGTGTACCTCTTCATCCTACCCCCCCTCCATAAGGATGATGACCAAGGAC CAGCTTCTGTTTCATGCTCGTGAAGCGTAGCCTTGGCCCGGCATATCGCT CCGTCCCGGCTTTCGAGGCCAATGGTCCAACGACCACGTTTACACGAGGA CACTAACCCACGGCTGCATCCATCCCCCAATATGCAGATCGACGTGAAGG TGATCGGGCTCAACGACAAGGGCAAGGTGCGCCTTAGCCGCAAGGCCGTC CTCATGGACGAGCGGGGAGGAAATGCGGGAGGAGGGGCCGCCGCCGCTCC GACCCCTCCGGGGCGAAAGCGGCCGAACGGGGCCCTGGCTAGCGGGGGCG CGCTCGGGGTGGTGAAGCGCGCCGCTCCTGCGGCGGCGAAACCAAAGGCG GCGGGGGTGGCGAAGACGGGGGTTCCGCTCTCGGCGGCAGTAGAAGGGCC CGCCGCCGGTGGCGGGGAGGGAGAAACGCCGAAGAAGGGCGGTTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7967:121..4966+

>mRNA_E_fasciculatus_S2_contig7967.16120.1 ID=mRNA_E_fasciculatus_S2_contig7967.16120.1|Name=mRNA_E_fasciculatus_S2_contig7967.16120.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=918bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7967:121..4966+ (Ectocarpus fasciculatus EfasUO2)
GGAATCACCACGTTCCAGCTGGACATCAAGTGCGCCGGCCTCACCACGGC
CCTCCTCGGGCGCGCCCTGACCCAGGCCAAGGCCGGGCGTCTTCACATCC
TGGGGGAGATGGAGAAGGCCCAGCCAGACGGCCCGAGGAAGGACATCTCC
CCCTTCGTGCCGACCGCGACCATCATGAGCGTGGACCCTGACCAGATCGG
AAAGATCATCGGCCCGGGAGGCAAGATTATCCGCCAGATCATCGAAGACT
TTTCGCTCGACGGCATGGATGTTGAGGAGGACGGTCGAGTCATGATTTCC
TCTTTCAACAGCACCAGCGCTGCAAGCGCCGTCAAGTACATCGAAGAAAT
GCTCAAGGACCTGACGTTGCGTGGGGGGGGGAGGGGAGGCGCCGGGGGCG
GCGGCGGCCGGTCCTCGCGCGGGGTGCCTCGCGACTTTAACACGACCGCG
ATCATCGGCTCCACCTACAGGGATTGCGAGGTGGTATCCATCCAGCCGTT
CGGCGCGTTCGTGGAGTTCGCGCCCGGGCTGGAGGGCCTCGTGCACGTGA
GCGAGCTGGACGTGAACCGCGTGGTGTCGGCGGAGGGGTTCTTGGCGGAC
AAGACGACGATCGACGTGAAGGTGATCGGGCTCAACGACAAGGGCAAGGT
GCGCCTTAGCCGCAAGGCCGTCCTCATGGACGAGCGGGGAGGAAATGCGG
GAGGAGGGGCCGCCGCCGCTCCGACCCCTCCGGGGCGAAAGCGGCCGAAC
GGGGCCCTGGCTAGCGGGGGCGCGCTCGGGGTGGTGAAGCGCGCCGCTCC
TGCGGCGGCGAAACCAAAGGCGGCGGGGGTGGCGAAGACGGGGGTTCCGC
TCTCGGCGGCAGTAGAAGGGCCCGCCGCCGGTGGCGGGGAGGGAGAAACG
CCGAAGAAGGGCGGTTAG
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