mRNA_E_fasciculatus_S2_contig7955.16112.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7955.16112.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB5_ECTSI) HSP 1 Score: 350 bits (898), Expect = 1.240e-112 Identity = 223/234 (95.30%), Postives = 225/234 (96.15%), Query Frame = 1
Query: 511 AWDPFAPGPQSNGQXXXXXXXXXXXXXADDWGLGELTDADIWGNLPTKKETVEDESNWSDDDASEGSRDDVASRSTSLSGGGXXXXXXXX----DRSGTKKNSIRQEQEDLELALRLQREXXXXXXXXXXXXXXNRGLSGIDRSMGASGGSREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKV 1200
AWDPFAPGPQSNGQXXXXXXXXX ADDWGLGELTDADIWGNLP+KKETVEDESNWSDDDASEGSRDD ASRSTSLSGGGXXXXXXXX DRSGTKKNSIRQEQEDLELALRLQREXXXXXXXXXXXXXX+RGLSGIDRSMGASGGSREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKV
Sbjct: 213 AWDPFAPGPQSNGQXXXXXXXXX----ADDWGLGELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDDAASRSTSLSGGGXXXXXXXXXXXGDRSGTKKNSIRQEQEDLELALRLQREXXXXXXXXXXXXXXSRGLSGIDRSMGASGGSREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKV 442
BLAST of mRNA_E_fasciculatus_S2_contig7955.16112.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K285_9PHAE) HSP 1 Score: 334 bits (857), Expect = 4.520e-106 Identity = 253/297 (85.19%), Postives = 260/297 (87.54%), Query Frame = 1
Query: 310 QVLASAANPFSNQLAPAPAGFVQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASXXXAWDPFAPGPQSNGQXXXXXXXXXXXXXADDWGLGELTDADIWGNLPTKKETVEDESNWSDDDASEGSRDDVASRSTSLSGGGXXXXXXXXDRSGTKKNSIRQEQEDLELALRLQREXXXXXXXXXXXXXXNRGLSGIDRSMGASGGSREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRKV 1200
QVLASAANPFSNQLAPAP GFVQ+GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADDWGLGELTDADIWGNLP+KKETVEDESNWSDDDASEGSRDD ASRSTS+SGGGXXXXXXXX+RSG K NS+RQEQEDLELALRLQREXXXXXXXXXXXXXX+RGLSGIDRSMGASGGSREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLK+KV
Sbjct: 215 QVLASAANPFSNQLAPAPVGFVQSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------ADDWGLGELTDADIWGNLPSKKETVEDESNWSDDDASEGSRDDAASRSTSISGGGXXXXXXXXNRSGPK-NSVRQEQEDLELALRLQREXXXXXXXXXXXXXXSRGLSGIDRSMGASGGSREVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKQKV 477
BLAST of mRNA_E_fasciculatus_S2_contig7955.16112.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW21_9STRA) HSP 1 Score: 119 bits (297), Expect = 3.840e-26 Identity = 96/225 (42.67%), Postives = 119/225 (52.89%), Query Frame = 1
Query: 604 GLGELTDADIWGNLPT----------KKETVEDESNWSDDDASEGSRDDVASRSTSLSGGGXXXXXXXXDRSGTKKNSIRQEQEDLELALRLQ----------------REXXXXXXXXXXXXXXNRGLSGIDRSMGASGGSREVAIRPRQAAGG-KADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRK 1197
G G+LTDADIWG+ K T +DE++WSDD + G XXXXXXX RQ + D ELA++LQ R N GL + + A G + P++AAG K DGEC ARIS RTLLVK WK TYFIFEL DLLLLYRSR+D++Y+P+GT IKKR+E++H+HTLT LKRK
Sbjct: 5 GWGDLTDADIWGDQKETSKGGAAGAPKSPTSDDEADWSDDXXXXXXXXXXXXXXSP--GASPXXXXXXXXXXXXXAQRGRQLESDHELAMKLQKRGLQLESNRVKRQKARPMSDSVTTLAAALYSNMGLFCEEEARAA--GRTTASASPQRAAGADKPDGECLARISKRTLLVKAWKPTYFIFELADLLLLYRSREDYIYHPKGTCIKKRIEIRHSHTLTPLKRK 225
BLAST of mRNA_E_fasciculatus_S2_contig7955.16112.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C852_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.450e-24 Identity = 73/130 (56.15%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 814 QEQEDLELALRLQREXXXXXXXXXXXXXXNRGLSGIDRSMGASGGSREVAIRPRQAAGG--KADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRK 1197
QE D +LAL+LQ+E A G + E A PR + G K DGEC ARIS RTLLV WK TYFIFELPDLLLLYRSRDD +YNPRG MIKKR+E+KHNHTLT LKRK
Sbjct: 1399 QEDSDYQLALKLQQE----------------------EEARARGEAPESASPPRTESKGSDKPDGECLARISKRTLLV--WKNTYFIFELPDLLLLYRSRDDRLYNPRGLMIKKRIEIKHNHTLTPLKRK 1504
BLAST of mRNA_E_fasciculatus_S2_contig7955.16112.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S9Y9_HETAK) HSP 1 Score: 76.6 bits (187), Expect = 1.370e-12 Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 994 ADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHNHTLTRLKRK 1197
A GE ARIS+RTLLVK+WK TY++F L LYRS+++ +YNPRG +KK++ + NHT T +KRK
Sbjct: 12 AQGEVLARISMRTLLVKEWKPTYWVFLGRQTLGLYRSKNEFLYNPRGQGMKKKIVINQNHTCTAIKRK 79
BLAST of mRNA_E_fasciculatus_S2_contig7955.16112.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4J7_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.210e-7 Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 1
Query: 952 REVAIRPRQAAGGKADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEVKHN 1170
R + RQ + + G AR+S+R+L+VK W+ T++IF+ +LLYR+R D + NP+GT IK R+ + HN
Sbjct: 215 RSLKFLARQESTERPQGVVLARLSLRSLVVKSWRPTFWIFDDEKTVLLYRNRQDWLLNPKGTAIKARINIGHN 287
BLAST of mRNA_E_fasciculatus_S2_contig7955.16112.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUJ4_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.190e-6 Identity = 34/74 (45.95%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 949 SREVAIRPRQAAGG---KADGECFARISVRTLLVKKWKTTYFIFELPDLLLLYRSRDDHMYNPRGTMIKKRVEV 1161
S++ + P +AA K +G ARISVRTL+VK+WK T++ LLLYRSR+D +YNP G M+KK + +
Sbjct: 288 SQDKTLSPTEAAIAAEHKTEGTILARISVRTLIVKEWKDTFWTIN-KGKLLLYRSREDFLYNPVGVMVKKDIPL 360 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7955.16112.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7955.16112.1 >prot_E_fasciculatus_S2_contig7955.16112.1 ID=prot_E_fasciculatus_S2_contig7955.16112.1|Name=mRNA_E_fasciculatus_S2_contig7955.16112.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=400bp GQPQQQQQGGLLALGPSTSSSDPFAPTTGGGSGGGGGGLLALPASQTSTNback to top mRNA from alignment at E_fasciculatus_S2_contig7955:1376..6763+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7955.16112.1 ID=mRNA_E_fasciculatus_S2_contig7955.16112.1|Name=mRNA_E_fasciculatus_S2_contig7955.16112.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5388bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7955:1376..6763+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7955:1376..6763+ >mRNA_E_fasciculatus_S2_contig7955.16112.1 ID=mRNA_E_fasciculatus_S2_contig7955.16112.1|Name=mRNA_E_fasciculatus_S2_contig7955.16112.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1200bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7955:1376..6763+ (Ectocarpus fasciculatus EfasUO2)back to top |