mRNA_E_fasciculatus_S2_contig794.16099.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Similar (to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI) HSP 1 Score: 443 bits (1139), Expect = 4.030e-140 Identity = 220/224 (98.21%), Postives = 223/224 (99.55%), Query Frame = 1
Query: 1 LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNGNAGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTATGLTTGLEYYFRVSARNTIGYSGFCELSGNTCAGDEVSTIIT 672
L ASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNG+AGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGG+YPGSDGGD+VYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTATGLTTGLEYYFRVSARNTIGYSGFCELSGNTCAGDEVSTIIT
Sbjct: 17199 LTASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNGDAGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGVYPGSDGGDNVYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTATGLTTGLEYYFRVSARNTIGYSGFCELSGNTCAGDEVSTIIT 17422
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH1_9PHAE) HSP 1 Score: 318 bits (815), Expect = 1.430e-96 Identity = 155/162 (95.68%), Postives = 161/162 (99.38%), Query Frame = 1
Query: 1 LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNGNAGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLG 486
L ASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYTVQYLSTSRRYY+KVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNG+AGTAT+SWDFPLVPTHG+PCFGTEETP+ICPTPVGG+YPGSDGGDDVYEYRIQWSTSLG
Sbjct: 9720 LTASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYTVQYLSTSRRYYIKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNGDAGTATISWDFPLVPTHGVPCFGTEETPSICPTPVGGVYPGSDGGDDVYEYRIQWSTSLG 9881
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHM4_9STRA) HSP 1 Score: 216 bits (550), Expect = 5.500e-61 Identity = 116/228 (50.88%), Postives = 148/228 (64.91%), Query Frame = 1
Query: 1 LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSER-AYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNGNAGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTATGLTTGLEYYFRVSARNTIGYSGFCELSGNTC---AGDEVSTIIT 672
L SF PP++DGGD VT+++ITWDVS FNSL G+PH GS V + + T+ YLS+ RYY KVAA N A AGVAR +SP S+YPS+Q PG PVG+ ++ +A T V+W FPL+P HGIPC GT P CPT GG SDGGD + Y +QWS + ++ G D ++ +YT T LT+GL+YY RV A NT+GY FCE GNTC AG +S +T
Sbjct: 2223 LTVSFAPPTTDGGDAVTSYIITWDVSAYFNSLTGTPHQGSTTVQGAGAGSVTLTYLSSGSRYYAKVAAVNGASAGVARISSPDSAYPSKQRPGKPVGVALASTSAQTINVAWQFPLIPWHGIPCSGTAAAPVQCPTAPGGTV-ASDGGDAITHYEVQWSLLSSFNVLYAS-GPLDATSRSYTITQLTSGLKYYVRVVAANTVGYGAFCEFGGNTCDTAAGTRLSKTVT 2448
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK73_HETAK) HSP 1 Score: 197 bits (502), Expect = 1.500e-54 Identity = 100/217 (46.08%), Postives = 134/217 (61.75%), Query Frame = 1
Query: 1 LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNGN-AGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTATGLTTGLEYYFRVSARNTIGYSGFCELSGNTCAG 648
L + PS DGGD++ + I WD + +F+S P GSA N+ RAYT+QYL+ +YYV+V+A N+AG G + PT PS Q PG PVGL A G+ +G VSWD+PL+P HG PC+G +P CP G P ++GG ++ EYR+QWS S + +++ GY DV + +YT LT G YY RV+ARN +GYS FCE GNTC G
Sbjct: 1725 LTVQWDEPSDDGGDDIQGYSIEWDTASTFDSASSFPDKGSAITNAKSRAYTMQYLTEGTKYYVRVSAYNAAGNGDTTTSWPTYKKPSLQAPGQPVGLTAVTGSDSGEIDVSWDYPLIPNHGYPCYGNITSPLECPETYGESDPATNGGTEITEYRLQWSVSEYFSATETDSGYTDVYSLSYTIGDLTEGTRYYVRVAARNAVGYSDFCEYIGNTCLG 1941
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G428_9STRA) HSP 1 Score: 170 bits (431), Expect = 4.790e-45 Identity = 91/221 (41.18%), Postives = 130/221 (58.82%), Query Frame = 1
Query: 1 LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNG-NAGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTATGLTTGLEYYFRVSARNTIGYSGFCELSGNTCAGDEVS 660
L SF P+ +GGD ++A+ + WD S SF++ SPH GS V+++E +YT++ LS + YY +V+ NSAG G + +SP S+YP+ Q PG P L A+ G + T V+W +P VP H IPC GT + P CPT GG S GGDD+ EY ++++ + D G + ++T+ T LT+G YY RV ARNT+G FC +SG C S
Sbjct: 1018 LTVSFDEPTDNGGDAISAYYVEWDTSSSFSTGSSSPHKGSVTVDATENSYTIRLLSENTVYYTRVSCINSAGYGTTQVSSPASAYPALQVPGRPHTLTATAGTDTATLDVTWQYPRVPAHEIPCGGTVDDPDDCPTAFGGTLAESTGGDDLTEYEVEYNEYSDFSGQDG--GSSTTASTSLTLEQLTSGRMYYIRVLARNTVGSGDFCSVSGEDCPATGTS 1236
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Hypothetical (protein n=13 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQT3_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.920e-42 Identity = 95/216 (43.98%), Postives = 125/216 (57.87%), Query Frame = 1
Query: 22 PSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSER-AYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNGNAGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTATGLTTGLEYYFRVSARNTIGYSGFCELSGNTCAGDEVSTI 666
P DGGD +TA+ + WD S SFNSL SPH G+ V+++ +YT+ LS S YYVKV+A N+AG G A A S+ PS PG P L A+ G G V+W +P VP HGIPC P+ CP +GG P S GG + EY I S S + +D+ S+T+ T +GLT YY RV+ARN++G S FCE G TC G ++S +
Sbjct: 18542 PEDDGGDSITAYRVEWDTSSSFNSLSASPHKGTVDVDATVALSYTIDELSPSTTYYVKVSAINAAGYGAASAT--LSAAPSLVIPGAPRSLSAAPGGEGEVDVAWLYPRVPHHGIPCAAFAANPSECPVALGGALPESTGGAALLEYEITASESPLFDGTDTHT--VTTSSTSVTVSGLTPDRRYYVRVAARNSVGTSAFCENEGTTCTGAQLSAV 18753
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFV5_AURAN) HSP 1 Score: 161 bits (408), Expect = 6.570e-42 Identity = 90/226 (39.82%), Postives = 131/226 (57.96%), Query Frame = 1
Query: 1 LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSS-ERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGL-VASNGNAGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTATGLTTGLEYYFRVSARNTIGYSGFCELSGNTCAGDEVSTIIT 672
L + P+ DGGD+V+++ + WD S SFNSL SPH G+ V++S +YT+ L+TS YYV+V N+AG G A A S+ P+ Q GIP + VA+ +AG V W +P VP HG+PC + +P CPT +G P S GG + EY ++W+ G+ +D G ++T+ T +GLT YY RV ARN++G FCE G+ C G ++ + T
Sbjct: 14824 LTIGYAYPADDGGDDVSSYRVEWDTSSSFNSLSASPHKGTVDVDASVAMSYTIDELTTSTTYYVRVLPINAAGYGTASAT--MSAAPALQVAGIPRSISVAAGTSAGEVDVEWLYPRVPHHGVPCSAFDASPAECPTALGSSLPESTGGSAIIEYEVEWNEKDGFDGTDG--GSITTTSTSITISGLTEERGYYVRVLARNSVGSGKFCENEGSVCTGSQLYAVAT 15045
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JS23_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.610e-39 Identity = 86/225 (38.22%), Postives = 123/225 (54.67%), Query Frame = 1
Query: 1 LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSS-ERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNGNAGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTATGLTTGLEYYFRVSARNTIGYSGFCELSGNTCAGDEVSTIIT 672
L + P+ +GG E+ + + WD +FNSL SPH G+ V++S +YT+ LS + RYY++V N AG G A A S+ P+ Q PGIP + S +AG VSW +P +P HGIPC G + P CP +GG P S GG + EY ++ + + +D ++T+ T +GLT G YY RV RN +G FC LSG+ C GD + + T
Sbjct: 2372 LTVGYDTPTDNGGAEIQYYRVEWDTMPNFNSLSASPHKGAVDVDASIALSYTIDELSVATRYYIRVIPINLAGYGAASAT--LSAMPALQIPGIPRSITVSPSSAGAIDVSWLYPRIPYHGIPCGGFDTNPDECPVALGGSLPESTGGSAILEYEVEINERAAFDGTDGLT--VTTTSTSLTISGLTEGRGYYVRVLTRNAVGSGQFCALSGSVCTGDVLYAVAT 2592
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7U4_THAOC) HSP 1 Score: 137 bits (344), Expect = 1.440e-33 Identity = 81/210 (38.57%), Postives = 117/210 (55.71%), Query Frame = 1
Query: 1 LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNG-NAGTATVSWDFPLVPTHGIPCFGTEETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLGYVPSDSTFGYADVSNTTYTA-TGLTTGLEYYFRVSARNTIGYSGFCE 624
L + P SDGGD +T + + WD S+ S +P+ G V+S+ ++T++ LS ++ Y+V+V A+N +G A+ A+P+S+ PS Q PGIP L+ G + G+ VSW P VP HGIPC + CP P GG P SDGGDD++EY ++W S SD++ V + + T L G Y RV ARN+ G F E
Sbjct: 467 LTIGWEAPLSDGGDSITNYRVEWDTKNSYASSSLAPNKGFVDVDSATTSHTLELLSPAKSYHVRVFAKNRSGLSAAQLATPSSATPSLQVPGIPFALMGVPGTDLGSIEVSWQRPRVPHHGIPCSNNGDMIIDCPAPFGGSVPASDGGDDIFEYELEWRESS----SDASHAKRAVYSGFHAVLTNLVVGKSYSVRVLARNSQGSGSFSE 672
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DYP9_CAFRO) HSP 1 Score: 131 bits (330), Expect = 1.830e-31 Identity = 90/244 (36.89%), Postives = 119/244 (48.77%), Query Frame = 1
Query: 1 LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARV-NSSERAYTVQYLSTSRRYYVKVAAENSAGAGVARAASPTSSYPSQQPPGIPVGLVASNGNA-------GTATVSWDFPLVPTHGIPCFGT---EETPTICPTPVGGLYPGSDGGDDVYEYRIQWSTSLGY--VPSDSTFGYADV---SNTTYT------ATGLTTGLEYYFRVSARNTIGYSGFCELSGNTCAGDEVSTI 666
+ F P DGGD VT+ + WDV F S PH GSA V S+ RAYTV LS RY+V+VAA NS G G+A P P++Q PG P +V + G V P+VP HGIPC G +TP ICP+ +G +DGG +++Y +QWST + SD D+ SN +T + L G YY RV+ARN G FC+ G C + + +
Sbjct: 15620 VTVGFDLPLDDGGDAVTSVRVEWDVDPEFESTATMPHKGSAVVATSAARAYTVTGLSAGTRYFVRVAAGNSVGFGLASIDKPAGVVPARQVPGRPTWVVVRSNTTDADVSCGGEIVVEIGSPIVPAHGIPCSGNGLATQTPGICPSGMGSGTQ-ADGGAAIHKYEVQWSTFADFRDTTSDGGSSMLDITGASNPPFTKHLTRSSNNLQAGQLYYVRVAARNDQGIGAFCDAGGMLCDEEPLKAV 15862 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig794.16099.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig794.16099.1 >prot_E_fasciculatus_S2_contig794.16099.1 ID=prot_E_fasciculatus_S2_contig794.16099.1|Name=mRNA_E_fasciculatus_S2_contig794.16099.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=225bp LQASFYPPSSDGGDEVTAFLITWDVSESFNSLVGSPHSGSARVNSSERAYback to top mRNA from alignment at E_fasciculatus_S2_contig794:20279..21644- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig794.16099.1 ID=mRNA_E_fasciculatus_S2_contig794.16099.1|Name=mRNA_E_fasciculatus_S2_contig794.16099.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1366bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig794:20279..21644- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig794:20279..21644- >mRNA_E_fasciculatus_S2_contig794.16099.1 ID=mRNA_E_fasciculatus_S2_contig794.16099.1|Name=mRNA_E_fasciculatus_S2_contig794.16099.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=675bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig794:20279..21644- (Ectocarpus fasciculatus EfasUO2)back to top |