mRNA_E_fasciculatus_S2_contig7929.16089.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7929.16089.1
Unique NamemRNA_E_fasciculatus_S2_contig7929.16089.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 739 bits (1907), Expect = 3.400e-268
Identity = 388/403 (96.28%), Postives = 396/403 (98.26%), Query Frame = 1 
Query:   13 MEFRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXXXMEVSIRYAETTARLYLESADNGT-RGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 1218
            ME RRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXX + VSIRYAE+TARLYLESADNGT RGGCVTLGQIWESRAGKGPLYAVDPD+GNVST+ATGTWLL+EELYVEDGITL+VYGSEAGGDADELRLLSTN TFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISA+SEIITD DETCEGNAKNTMGEARMDIE+SEI YLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE
Sbjct:    1 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXXDIAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
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BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: Mannuronan (C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 737 bits (1903), Expect = 6.880e-266
Identity = 387/403 (96.03%), Postives = 394/403 (97.77%), Query Frame = 1 
Query:   13 MEFRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXXXMEVSIRYAETTARLYLESADNGT-RGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 1218
            ME RRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXX  + VSIRYA TTARLYLESADNGT RGGCVTLGQIWESRAGKGPLYAVDPD+GNVST+ATGTWLL+EELYVEDGITL+VYGSEAGGDADELRLLSTN TFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISA+SEIITD DETCEGNAKNTMGEARMDIE+SEI YLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE
Sbjct:    1 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
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BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 684 bits (1766), Expect = 5.660e-245
Identity = 339/407 (83.29%), Postives = 360/407 (88.45%), Query Frame = 1 
Query:   13 MEFRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXXXMEVSIRYAETTARLYLESADNGTRGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 1218
            MEFRR +A     LAL+GLLA+T+                      +EVSIRYA TT RLYLESAD  TRGGC TLGQIWESRAGK PLYAVDPD+G+VS   TGTWLL+EELYVEDGITL+VYG++ GGDADELRLLST+ T+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISAVSEI+TD DETCEGNAKNTMGEARMDIENSEI YLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVR SVGCADNVFS N ISNN++
Sbjct:    1 MEFRRKSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSK 407
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BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: Mannuronan (C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 604 bits (1557), Expect = 8.560e-214
Identity = 289/359 (80.50%), Postives = 323/359 (89.97%), Query Frame = 1 
Query:  142 VSIRYAETTARLYLESADNGTRGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 1218
            VS+RY   +ARLY+ESA+  TRGGCVTL QIWE +    PLYAVDP +G+VS +ATGTWLL+EE+YVEDGITLQV+G  AGGDADELRLLST+ TFI+LRA+GGSLDF+STKVF+WDTS N+PD+DE+DGRSYISAVSE+ITD  +TC G AKN MGEARMDIENSE+AYLGY  +E+YGLTWKVRGFC DK NPE+FDDVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEV+NNGYHGIIASKRCNGVSIQGNEVYGG+  SAGIFLHRSSD+ IVKGNYVHDNGDAGLAMLESFNADVS+NTFENNKYGVR SVGC  N+FS N I+ +AE
Sbjct:   16 VSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAE 374
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BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 561 bits (1446), Expect = 1.590e-196
Identity = 272/355 (76.62%), Postives = 303/355 (85.35%), Query Frame = 1 
Query:  142 VSIRYAETTARLYLESADNGTRGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTIS 1206
            VSIRY+    RLYLESAD+ TRGGCVTL QIWE + G+ PLYAVD  +G++S +ATGTWLL+EEL+VEDGITL+V+G+ AGGDADELRLLST+ TFINLRAHGGSLDF+STKVF+WDTS N PD DE DGRSY+SAVSE+ITD  +TC G AKN MGEARMDIE+SE+ YLGY  SESYGLTWKVRGFC DKSN ++F+DVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVY+NGYHGIIASKRCNGVSIQGNEVYGGA +SAGIFLHR                DAGLAM+ESFNADVS+N FENNKYG+RFSVG   NVF NN IS
Sbjct:   42 VSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVIS 396
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BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: Mannuronan (C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 6.690e-189
Identity = 268/372 (72.04%), Postives = 306/372 (82.26%), Query Frame = 1 
Query:  142 VSIRYAETTARLYLESADNGTRGGCVTLGQIWESRAG------KGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLST-------NGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 1218
            VSIRY+ TT RLYLE+   G RGGCVT+ QIWE+R G      K PLYAVDP +G  S   TGTWLL E+LYVEDGITL+V+G+ +GG ADELRL ST       NGT+INLRAHGGSLDF  TKVF WDT+ NS D DETDGRSYISAVSEI+ D  +TCEGNAKNTMGEARMDI NSE+ Y+G+ DSESYGLTWKVRGFC+DKSNPEVFD VNVYGN+YDS++HHMNF +YTYGHQQGDWRRN +H NSGYG+DPHDDSDFLTIHDN VY+N +HGIIASKRCN VSIQGN VYGG +TSAGIFLHRSSD A+VK N+ + NGDAG+AMLES NA++S N FE NKYG+R SVGC DN  SNNT++N ++
Sbjct:  121 VSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQ 492
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BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: Mannuronan (C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 539 bits (1389), Expect = 7.220e-188
Identity = 263/360 (73.06%), Postives = 298/360 (82.78%), Query Frame = 1 
Query:  139 EVSIRYAETTARLYLESADNGTRGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 1218
            +VSIRY++T+ RLYLESAD  TRGGCVTL  IW    G  PLYAV P +G+VS++ TGTWLL+E LYVEDGITLQV+G  AGG ADELRLLST+  FINLRAHGGSLDFVSTKVF+WDTS N    D++ GRSYISAVSE+ITD+ + C+G AK  MGEARMDIE+SE+AYLGY+ SESYGLTWKVRG C D SN EVFD VNVYGN+YDSDIHH  FG+YTYGH+QGDWRRNKMH N+ YGFDPHDDSDFLTIHDNEVYNNG HGIIASKRCNG          GA  S GIFLHRSSDDAIVK NYVHDNGDAG+A++E+FNADVS N FE+NKYG+R SVGCADNVFS N I+ +++
Sbjct:   41 KVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSK 400
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BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: MEP5a (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 501 bits (1289), Expect = 4.330e-175
Identity = 248/312 (79.49%), Postives = 264/312 (84.62%), Query Frame = 1 
Query:   13 MEFRRSAA----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXXXMEVSIRYAETTARLYLESADNGTRGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG 936
            MEFRRSA     LAL+GLLAAT                       + VSIRYA +T RLYLESAD  TRGGCVTLGQIWE+RAGK PLYAVDP++GN S N TGTWLL+EELYVEDGITL+VYG+  GGDADELRLLST  T+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISA+SEIITD DETCEGNAKNTMGEARMDIENSEI YLG+ DSESYGLTWKVRGFC+DKSNP +FD+VNVYGN+YDSDIHHM FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNG HG
Sbjct:    1 MEFRRSATSSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312
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BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: Mannuronan (C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 498 bits (1283), Expect = 9.710e-172
Identity = 248/360 (68.89%), Postives = 287/360 (79.72%), Query Frame = 1 
Query:  139 EVSIRYAETTARLYLESADNGTRGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 1218
            +VSIRY+ ++ RLYLESAD  TRGGCVTL +IW+   G  PLYAV P +G+VS++ATGTWLL+E+LYVEDGITLQV+G+ AGG+A+ELRLLST+  FINLRAHGGSLDFVSTKVF+WDTS N    D +  RSYISAVSEIITD+ E C+G AK TMGEARMDIE+SE+AYLGY  SESYGLTWKVRGFC+D SNPEVFD+VNVYGN+YDSDIHH +FG+YTYGH+QGDWRRNKMH N  YGFDPHDDSDFLTIHDN+V                          G+  S GIFLHRSSDDAIVK N    NGDAG+A++ESFNADVS N FE+NKYGVR SVGCADNVFS N IS++++
Sbjct:   44 KVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSK 403
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Match: Mannuronan (C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA2_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 8.570e-137
Identity = 201/271 (74.17%), Postives = 224/271 (82.66%), Query Frame = 1 
Query:   13 MEFRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXXXMEVSIRYAETTARLYLESADNGTRGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATGTWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMGEARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYG 810
            MEFRR +A     LAL+GLLA+T+                      +EVSIRYA  T RLYLESAD  TRGGC TLGQ+WESRAGKGPLYAVDPD+G+VS   TGTWLL+EELYVEDGITL+VYG++ GGDADELRLLST+ T+INLRA+GGSLDFV TKVFSWDTSTNSPD  ETDGRSYISAVSEI+TD DE+CEG+AKNTMGEARMDIENSEI YLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYT G
Sbjct:    1 MEFRRRSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGNTKRLYLESADGETRGGCATLGQVWESRAGKGPLYAVDPDSGDVSETQTGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSDTYINLRAYGGSLDFVGTKVFSWDTSTNSPDVVETDGRSYISAVSEIVTDEDESCEGHAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTDG 271
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7929.16089.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Mannuronan3.400e-26896.28C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Mannuronan6.880e-26696.03C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID... [more]
Mannuronan5.660e-24583.29C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Mannuronan8.560e-21480.50C-5-epimerase (Fragment) n=1 Tax=Laminaria digitat... [more]
Mannuronan1.590e-19676.62C-5-epimerase n=1 Tax=Laminaria digitata TaxID=803... [more]
Mannuronan6.690e-18972.04C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Mannuronan7.220e-18873.06C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88... [more]
MEP5a4.330e-17579.49protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Mannuronan9.710e-17268.89C-5-epimerase n=2 Tax=Laminaria digitata TaxID=803... [more]
Mannuronan8.570e-13774.17C-5-epimerase N-terminal n=1 Tax=Ectocarpus silicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7929contigE_fasciculatus_S2_contig7929:4058..7048 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score349.0
Seed ortholog evalue3e-93
Seed eggNOG ortholog2880.D8LC73
Model size1221
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categorysignal peptide
Exons8
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Ec32 ortholog descriptionMannuronan C-5-epimerase N-terminal fragment
Ec32 orthologEc-18_000150.1
Cds size1209
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7929.16089.1prot_E_fasciculatus_S2_contig7929.16089.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7929 4070..7048 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842453.4751818-UTR-E_fasciculatus_S2_contig7929:4057..40691696842453.4751818-UTR-E_fasciculatus_S2_contig7929:4057..4069Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7929 4058..4069 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842453.491215-CDS-E_fasciculatus_S2_contig7929:4069..44201696842453.491215-CDS-E_fasciculatus_S2_contig7929:4069..4420Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7929 4070..4420 +
1696842453.502653-CDS-E_fasciculatus_S2_contig7929:4742..48561696842453.502653-CDS-E_fasciculatus_S2_contig7929:4742..4856Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7929 4743..4856 +
1696842453.5153806-CDS-E_fasciculatus_S2_contig7929:5169..53851696842453.5153806-CDS-E_fasciculatus_S2_contig7929:5169..5385Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7929 5170..5385 +
1696842453.5265172-CDS-E_fasciculatus_S2_contig7929:5677..57921696842453.5265172-CDS-E_fasciculatus_S2_contig7929:5677..5792Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7929 5678..5792 +
1696842453.537166-CDS-E_fasciculatus_S2_contig7929:5986..60401696842453.537166-CDS-E_fasciculatus_S2_contig7929:5986..6040Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7929 5987..6040 +
1696842453.5477598-CDS-E_fasciculatus_S2_contig7929:6236..63081696842453.5477598-CDS-E_fasciculatus_S2_contig7929:6236..6308Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7929 6237..6308 +
1696842453.5587106-CDS-E_fasciculatus_S2_contig7929:6593..67131696842453.5587106-CDS-E_fasciculatus_S2_contig7929:6593..6713Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7929 6594..6713 +
1696842453.569848-CDS-E_fasciculatus_S2_contig7929:6881..70481696842453.569848-CDS-E_fasciculatus_S2_contig7929:6881..7048Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7929 6882..7048 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7929.16089.1

>prot_E_fasciculatus_S2_contig7929.16089.1 ID=prot_E_fasciculatus_S2_contig7929.16089.1|Name=mRNA_E_fasciculatus_S2_contig7929.16089.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=403bp
MEFRRSAALALVGLLAATSTAAAADTPSPNEPIPKPDCDSDMEVSIRYAE
TTARLYLESADNGTRGGCVTLGQIWESRAGKGPLYAVDPDTGNVSTNATG
TWLLSEELYVEDGITLQVYGSEAGGDADELRLLSTNGTFINLRAHGGSLD
FVSTKVFSWDTSTNSPDEDETDGRSYISAVSEIITDADETCEGNAKNTMG
EARMDIENSEIAYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNV
YDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNE
VYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNY
VHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNN
AE*
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mRNA from alignment at E_fasciculatus_S2_contig7929:4058..7048+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7929.16089.1 ID=mRNA_E_fasciculatus_S2_contig7929.16089.1|Name=mRNA_E_fasciculatus_S2_contig7929.16089.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2991bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7929:4058..7048+ (Ectocarpus fasciculatus EfasUO2)
CTCCACGCAAACATGGAGTTCCGACGAAGCGCAGCCTTAGCCCTGGTCGG
CCTTCTCGCCGCCACCAGCACCGCGGCAGCGGCGGACACCCCTTCCCCCA
ACGAGCCCATCCCCAAGCCCGACTGCGACTCCGACATGGAGGTCTCGATC
CGCTACGCCGAGACTACCGCGCGCCTCTACCTCGAGTCGGCAGACAATGG
CACCCGCGGCGGGTGCGTGACCCTCGGGCAGATCTGGGAGAGCCGGGCCG
GCAAGGGGCCGCTGTACGCGGTAGACCCGGACACGGGGAACGTGAGCACC
AACGCGACCGGCACGTGGCTTCTCTCCGAGGAGCTGTACGTGGAGGACGG
CATCACTCTCCAGGTTCGGATCGAGACTGATGAGCAACGTTTGGAGCTGC
ATGTTGATTTTGGGTTCAGGGCGACTCTCTGGCCCGACTGGCTCTCTCGC
CTTTACCAGTAGTCGTGTCTTCAGCCGGCGGGTTATTAGCCTGCATGGAG
GTTCGTTGTCCCATTTCGGGTATAGATCGGGGGCATGGTCGACCACCAGC
ATGCGAGCTGCAGTTGAACCTTCTTCTGTAGAATCCATCATGCGCAACGT
ACTGCTGTCTGGCGTTAACAAGGAACCCTTGAAGGCGATGCCTGCCTGAC
CCCGACCTCTCGATATTGCTTTGGTGCCTCAACAGGTATACGGCTCAGAG
GCCGGAGGAGACGCCGACGAACTCCGACTGCTGAGCACTAACGGCACGTT
CATCAACCTCCGAGCGCATGGCGGGAGCCTGGACTTCGTCAGCACCAAGG
TAGACAAGAAGCGACAACATCAGCCCGCGCGGGGCGTTGTCGCACTCTGT
TGCAAGTTTTTCGCGGAAGCTGATTGGCCCACTCGGGGTGTCTTTTGCAT
CACGGTTAGCGTTTTCCAGAATCGTACCTTTGTTTCCGCTGTGCATTCGC
CCGTCTCTTTTCGTTTGCGCTCTCTGCTGGTGCTGCCCCTTCCTCCTCTT
CTTCCCCCGTGCTACACTCGCGTCTTACGCCAACGTCTCCTCTGTTTCGA
GAATAATCACACTTTCCCTCGCGTCCCCATCCGACCCTTTTCCCTTTGCT
GCTGAACCGAAGGTCTTCTCGTGGGACACCAGCACCAACTCGCCGGACGA
AGACGAAACCGACGGCCGGTCGTACATCAGCGCCGTCTCGGAGATCATCA
CCGATGCCGACGAGACTTGCGAGGGCAACGCCAAGAACACCATGGGGGAG
GCCCGCATGGACATCGAGAACAGCGAGATAGCCTACCTCGGGTACTGGGA
CAGCGAGAGCTACGGCCTCACTTGGAAGGTGCATAAATATTCGGTTTGGG
TCGTTTCTGTTTGGATCTACTGGGTCGCAGTTGGTTTTAGCTTGTCGCGT
CCGATGACAGCGAACGGTGTATTTAGGTAAGTACGTACGTAAGGGAACGT
GCTTTGGAGCTGTGGTGAAGGGCGTGGAAAAGATTCAACCAAGGCATGTG
GACAAACACACCTTGCGTCCTTGCGGCGTGTACCAGTCGAATCTACTGCT
GAAGTGGCTGTCCATCGTGATACACTAAACCAAATTTGTTGGTTGTTGCA
ATGTGAACCAAACGACCCAGGTTCGCGGGTTCTGCGAGGACAAGTCTAAC
CCGGAGGTGTTCGACGACGTGAACGTGTACGGCAACGTGTACGACAGCGA
CATCCACCACATGAACTTCGGCCTCTACACTTACGGTGAGCTTCGGGACG
TTGATTTGGTTCTCGAGTGCGTGGGGGTTGGCTGCTGCCGACAGCGTGGC
CGGGGGTCCTGTGATGTGGGTTTGTCGTGTGTCAAACCTCAACACGTAAA
GTCATTGCGGGTCTAGTTTTGAATTGTTAGCCCCCCACCCATTCACGTCC
TTCTCCCTGCCCGTCCCACCACCCGACAGGCCACCAGCAGGGAGACTGGA
GGAGGAACAAGATGCACGACAACTCCGGATACGGTAAGCTACCTTCGATC
CGATCTTCCCTCTGCTGGTGGCAACGTATCAAGTATTGGGTAGCGCAAAA
GCTGGATGGATCGCCTGTGACAAAATGTGTTCCCTAGTTATTCTGATACC
CTCTTGCACCTGCGTCGCAATATCTCAATTTCCTTTCGTCCCGCTCCCCC
CCCTGCATGTTTTTTGTGGGTTCGACCAGGCTTTGACCCCCACGACGACA
GCGACTTCCTCACGATCCACGACAACGAGGTGTACAACAACGGCTACCAC
GGTGAGACTACAGAAAGATCAACACGAACCGAATCCCCTTGCCATAGCCA
CCTCTAGGGCTTTTCGTTTTGGTTGATCCCTATGCCACCGCTATAGCACC
CTGAGAATGGACATGTTGGGCTGTTGAGTGTCATTTTGATATGTTTCTCT
TTTTCTTCTCCGTTGTCGCTGCCGTCGATTTGTTGATGTCATCGGGAAAG
CAGCGATTCGGATTCCTTTTATCTCACACCTACCTTCCCCTCTCCCTCTC
GCGACACTTGGTCCATCTTTGACTTCGGCAAACCAGGTATCATCGCCTCC
AAGCGGTGCAACGGCGTGTCTATCCAGGGCAACGAGGTGTACGGCGGTGC
CGAGACGTCCGCGGGCATCTTCCTTCACCGCAGCAGCGACGACGCCATCG
TCAAGGGTAAGTTGTCATTTACTGCATTCTTCTTGGGTGGCCGTTCGCCC
GCGCGCGCACTTACTGTCCGTTGGATGAGTACGCAATACGTTGTGACTGG
CCTGCCTCCCCCACGCCTTCTTTCAACCGCACACAAGTATCTGACCACGG
TTTTGTATTTTTTCTTGCTCCCAGGGAACTACGTGCACGACAACGGCGAC
GCCGGGTTGGCGATGCTCGAGTCGTTCAACGCCGATGTGTCGGAGAACAC
GTTCGAGAACAACAAGTACGGCGTGCGGTTCAGCGTGGGCTGCGCCGACA
ACGTGTTCTCCAACAACACCATCAGCAACAACGCCGAGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7929:4058..7048+

>mRNA_E_fasciculatus_S2_contig7929.16089.1 ID=mRNA_E_fasciculatus_S2_contig7929.16089.1|Name=mRNA_E_fasciculatus_S2_contig7929.16089.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1209bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7929:4058..7048+ (Ectocarpus fasciculatus EfasUO2)
ATGGAGTTCCGACGAAGCGCAGCCTTAGCCCTGGTCGGCCTTCTCGCCGC
CACCAGCACCGCGGCAGCGGCGGACACCCCTTCCCCCAACGAGCCCATCC
CCAAGCCCGACTGCGACTCCGACATGGAGGTCTCGATCCGCTACGCCGAG
ACTACCGCGCGCCTCTACCTCGAGTCGGCAGACAATGGCACCCGCGGCGG
GTGCGTGACCCTCGGGCAGATCTGGGAGAGCCGGGCCGGCAAGGGGCCGC
TGTACGCGGTAGACCCGGACACGGGGAACGTGAGCACCAACGCGACCGGC
ACGTGGCTTCTCTCCGAGGAGCTGTACGTGGAGGACGGCATCACTCTCCA
GGTATACGGCTCAGAGGCCGGAGGAGACGCCGACGAACTCCGACTGCTGA
GCACTAACGGCACGTTCATCAACCTCCGAGCGCATGGCGGGAGCCTGGAC
TTCGTCAGCACCAAGGTCTTCTCGTGGGACACCAGCACCAACTCGCCGGA
CGAAGACGAAACCGACGGCCGGTCGTACATCAGCGCCGTCTCGGAGATCA
TCACCGATGCCGACGAGACTTGCGAGGGCAACGCCAAGAACACCATGGGG
GAGGCCCGCATGGACATCGAGAACAGCGAGATAGCCTACCTCGGGTACTG
GGACAGCGAGAGCTACGGCCTCACTTGGAAGGTTCGCGGGTTCTGCGAGG
ACAAGTCTAACCCGGAGGTGTTCGACGACGTGAACGTGTACGGCAACGTG
TACGACAGCGACATCCACCACATGAACTTCGGCCTCTACACTTACGGCCA
CCAGCAGGGAGACTGGAGGAGGAACAAGATGCACGACAACTCCGGATACG
GCTTTGACCCCCACGACGACAGCGACTTCCTCACGATCCACGACAACGAG
GTGTACAACAACGGCTACCACGGTATCATCGCCTCCAAGCGGTGCAACGG
CGTGTCTATCCAGGGCAACGAGGTGTACGGCGGTGCCGAGACGTCCGCGG
GCATCTTCCTTCACCGCAGCAGCGACGACGCCATCGTCAAGGGGAACTAC
GTGCACGACAACGGCGACGCCGGGTTGGCGATGCTCGAGTCGTTCAACGC
CGATGTGTCGGAGAACACGTTCGAGAACAACAAGTACGGCGTGCGGTTCA
GCGTGGGCTGCGCCGACAACGTGTTCTCCAACAACACCATCAGCAACAAC
GCCGAGTGA
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