mRNA_E_fasciculatus_S2_contig789.16048.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: TYRosinase (family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI) HSP 1 Score: 714 bits (1843), Expect = 2.790e-255 Identity = 339/375 (90.40%), Postives = 350/375 (93.33%), Query Frame = 1
Query: 19 QVTVELERPGTVYFLSVEIVDENGGVIAEGNSKVSCKYVRREIRNLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQ-ERFCGCTCMIDAFAIDDEQVYAFMEDFMTSASAKVQGDQYITYDGDARFPYGFMQ 1140
QVTVELERPGT YFLSVE VDENG VI EGNSKVSCKYVRREIR+LTDRDREAFLDAM IWYT+PTDVGK RYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSAS GHEWYNSV+FD DWFGSAFGS EN YAIPESRF N+STIYDPDG LVDSRIS YHNAYGYVTS +NYQDLPR+SRTSSFCGVPSHAVL+TAETFVDCFDGGYTTLSGWESCME MVHGDIHGLLGGAFSCNTDM FSE HPEYSAGLLSFVLEYMTFTFWP NSFIPQAN+CQTSCS GQ ERFC CTCMIDAFAIDD+QVYA+MEDFMTSAS K QGDQYI+YDGD RFPYGFMQ
Sbjct: 98 QVTVELERPGTAYFLSVESVDENGRVITEGNSKVSCKYVRREIRDLTDRDREAFLDAMLIWYTLPTDVGKDRYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASLGHEWYNSVVFDNDWFGSAFGSQENGYAIPESRFGNVSTIYDPDGTLVDSRISSYHNAYGYVTSAFNYQDLPRMSRTSSFCGVPSHAVLSTAETFVDCFDGGYTTLSGWESCMETMVHGDIHGLLGGAFSCNTDMSAFSEAHPEYSAGLLSFVLEYMTFTFWPTNSFIPQANVCQTSCSTGQDERFCRCTCMIDAFAIDDKQVYAYMEDFMTSASVKFQGDQYISYDGDVRFPYGFMQ 472
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: Hypothetical (tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G530_ECTSI) HSP 1 Score: 500 bits (1288), Expect = 2.530e-172 Identity = 229/374 (61.23%), Postives = 280/374 (74.87%), Query Frame = 1
Query: 19 QVTVELERPGTVYFLSVEIVDENGGVIAEGNSKVSCKYVRREIRNLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVYAFMEDFMTSASAKVQGDQYITYDGDARFPYGFMQ 1140
Q TV L+ PGTVY L+V V E+G V+AEG K SCKYVRREIR+LTD DREAFLDAM+ WYT+PTD GKA+YGP++SNY I A H D +NFCYH G+QFLTSHAAFDL +ERYLQMIDP+VSLP+WD+MIDSA G EWY+SV+F DWFGSA G EN + + RF N+S IYDPD L DSR++P HN YGY++S +NYQDLPR++RTSS+CG+ S AT + F+ CF G +L GWE CM+ +HGDIHGLLGGAF CNTDM FS +HPEYS GLL+F L+ +TF F N+ P N+C SC RGQ CGCTC++DAFAI +EQVY +M+ FM +A G YIT+D +A +PYGF+Q
Sbjct: 68 QATVTLDSPGTVYVLTVREVSEDGQVVAEGRVKASCKYVRREIRDLTDGDREAFLDAMETWYTLPTDAGKAKYGPNYSNYMSIAAIHGTDYKNFCYHQGMQFLTSHAAFDLIVERYLQMIDPTVSLPVWDYMIDSALLGLEWYDSVMFQPDWFGSAMGDVENHFMVTGGRFGNVSAIYDPDYTLTDSRVTPTHNPYGYLSSSHNYQDLPRLTRTSSYCGLQSRDTFATLDVFLGCF-GDNRSLYGWEECMQYKIHGDIHGLLGGAFDCNTDMANFSAEHPEYSHGLLAFALQILTFKFTACNALTPDDNVCDASCDRGQTEPCGCTCLMDAFAISEEQVYGYMQPFMEAAMTDFSGYLYITHDEEAAYPYGFIQ 440
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: Hypothetical (tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM86_ECTSI) HSP 1 Score: 472 bits (1214), Expect = 3.730e-160 Identity = 227/413 (54.96%), Postives = 271/413 (65.62%), Query Frame = 1
Query: 19 QVTVELERPGTVYFLSVEIVDENGGVIAEGNSKVSCKYVRR---------------------------------------EIRNLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVYAFMEDFMTSASAKVQGDQYITYDGDARFPYGFMQ 1140
Q TV L+ PGTVY L+V V E+G V+AE + SCKYVRR EIR LTDRDREAF DAMQ WYT+P VGK YGP FSNY +TA H +V+NFCYH G+QFLTSHAAFDLTMERYLQMIDP+VSLP+WD+MIDSA G EWY S IF DWFGSA EN + + RF N+S IYDP+ L DSR+ P HN YGYV+S +NYQDLPR++RTSS+CG+ S LAT + F+ CF+ + WE CM+ +HGDIHGLLGGAF CNTDM FS +HPEYS GLL+F L+ +TF F +N P N C C +GQ CGCTC+IDAFAI D+QVY +ME FM +A G QYIT+D +A +PYGF+Q
Sbjct: 67 QATVTLDSPGTVYVLTVREVSEDGQVVAEARVEASCKYVRRFPLGACVQYLRVWRPFASGQPLTRPQHVPPLLLVSCDRREIRELTDRDREAFFDAMQTWYTIPNSVGKTTYGPDFSNYMPVTAIHGTEVQNFCYHQGMQFLTSHAAFDLTMERYLQMIDPTVSLPVWDYMIDSAWLGLEWYESEIFQPDWFGSAMSDVENHFMVTGGRFGNVSAIYDPEDTLTDSRVKPTHNPYGYVSSPHNYQDLPRLTRTSSYCGLQSRDTLATLDAFLGCFEESRSFYD-WEYCMQYKIHGDIHGLLGGAFDCNTDMADFSAEHPEYSHGLLAFTLQILTFKFTAWNILTPDDNTCDAKCMKGQTEPCGCTCLIDAFAIPDQQVYGYMEAFMDAAMTDFSGYQYITHDEEAAYPYGFIQ 478
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: Tyrosinase_Cu-bd (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD30_9PHAE) HSP 1 Score: 419 bits (1078), Expect = 3.480e-145 Identity = 194/215 (90.23%), Postives = 204/215 (94.88%), Query Frame = 1
Query: 136 RREIRNLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMV 780
RREIR+LT+RDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQ ITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFM DSAS GHEWYNSV+FD DWFGSAFGSPEN YAI ESRF N+STI+DPDG LVDSRI PYHNAYGYVTS YNYQDLPR+SRTSSFCG+PSHAVL+TAETFV+CFDGG+TTLSGWESCME MV
Sbjct: 13 RREIRDLTERDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQAITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMTDSASLGHEWYNSVVFDNDWFGSAFGSPENGYAISESRFGNVSTIFDPDGTLVDSRIGPYHNAYGYVTSAYNYQDLPRMSRTSSFCGLPSHAVLSTAETFVECFDGGHTTLSGWESCMETMV 227
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: Common (central domain of tyrosinase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG6_ECTSI) HSP 1 Score: 407 bits (1045), Expect = 1.620e-134 Identity = 193/392 (49.23%), Postives = 268/392 (68.37%), Query Frame = 1
Query: 19 QVTVELERPGTVYFLSVE------IVDENG---------GVIAEGNSKVSCKYVRREIRNLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSR--ISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQ-ANICQTSCSRGQERFCGCTCMIDAFAIDDEQVYAFMEDFMTSASAKVQGDQYITYDGDARFPYGFMQ 1140
+V+VE +PG VY L+VE V +G VI KVSCK+VRRE+R+L++ DREAFLDAM+ +Y V + G+A+YG F +YQ++ +YH+AD+++FCYH G+QFLT+HAAF L +ER LQ I+P VSLP WD+MI++ + G +W +S IFD D FG A GS +N Y I + RF IS IYDP L + I P+HNAYG++++ YNYQ+ P ++RTSSFC + + +V AT++ F CF + TL WE CME+ VHGD+HGLLGGAF C+ DM F EDHPEY+ GLL+FV+EY+T FWP N+F+P +N C+T C GQE CGCTC +DA A+ ++++Y+ F++ A+ + G YI+YD + P+GF Q
Sbjct: 75 EVSVEFTKPGGVYLLTVEERLRAGAVSRDGTVVLNAGETAVIGRATIKVSCKHVRRELRDLSEADREAFLDAMEAYYAVSKEDGRAKYGEGFFDYQLLASYHSADLKSFCYHAGVQFLTAHAAFGLMLERSLQKINPRVSLPFWDYMIEAETLGPDWQDSPIFDDDMFGRAMGSADNGYQISDGRFGKISAIYDPHHNLPGNGLDIGPHHNAYGFLSATYNYQEAPLLTRTSSFCNLKADSVFATSDDFFSCFTA-HDTLGDWEHCMESKVHGDMHGLLGGAFKCSVDMHEFHEDHPEYTTGLLTFVVEYLTTKFWPNNAFMPPGSNTCETECVSGQEP-CGCTCSVDAMALSEDEIYSLTSTFLSQATQRFSGHAYISYDESSERPWGFQQ 464
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: Tyrosinase_Cu-bd (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPW4_9PHAE) HSP 1 Score: 361 bits (927), Expect = 3.450e-115 Identity = 177/375 (47.20%), Postives = 236/375 (62.93%), Query Frame = 1
Query: 25 TVELERPGTVYFLSVEIVDENGGVIAEGNSKVSCKYVRREIRNLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALV---DSRISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVYAFMEDFMTSASAKVQGDQYITYDGDARFPYGFMQ 1140
TV L G Y L V+ V+ +G +IAE ++CKYVRRE+R+LT DR F AM+ +YTV + G+ +YG FSN + + AYHN+ ++C+H G+ FL +HAAFDL +E LQ IDP VSLP WD+M+++A G EW +S IF D FGSA GSP N + I + FSNI+++YDP G ++ +S I+ HN+YG+V YN+Q LP + RTSS+CG+ A E FVDCF+ TT W SCME+ VH IHG++GG F CN DM F E++P+Y GLL+F L Y+ WP NS + N C C Q CGCTC++D F D++VY FMED + S + G Y+ D AR PYGFMQ
Sbjct: 235 TVTLTDAGEKYALLVQQVEADGSLIAEARVTITCKYVRRELRSLTGEDRTGFFAAMREFYTVSLEEGRDKYGEGFSNAKHVAAYHNSP--DYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLEAAHLGTEWPSSEIFSPDMFGSALGSPVNQFQISDGWFSNITSLYDPRGDILTPAESFITTSHNSYGFVDGVYNFQALPGVVRTSSYCGLEVVAEFTKCEVFVDCFESS-TTFHVWASCMEHQVHASIHGMIGGGFDCNIDMIEFHEENPQYDQGLLTFTLGYVLANKWPSNSLMRDFNECDEQCDVDQGEPCGCTCLVDPFEWTDDEVYDFMEDVLESLRGRANGASYVGEDVTARHPYGFMQ 606
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: TYR (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMG1_9PHAE) HSP 1 Score: 352 bits (903), Expect = 5.290e-113 Identity = 174/376 (46.28%), Postives = 237/376 (63.03%), Query Frame = 1
Query: 22 VTVELERPGTVYFLSVEIVD-ENGGVIAEGNSKVSCKYVRREIRNLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSR--ISPYHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVYAFMEDFMTSASAKVQGDQYITYDGDARFPYGFMQ 1140
VTV L G Y L V+ V+ ++G V+AE +SCKYVRRE+R LT DR F AM+ +YTV + G+A YG F + +++ AYHN ++C+H G+ FL +HAAFDL +E LQ IDP VSLP WD+M+++A G EW +S IF D FGSA GSP+N + I + FSNIS++YDP G L+ + IS HN YG+V S YNYQ +P +SRTSS+CG+ + + E FV CF+ +L W CME+ VH +HG++GG F+CN +M F E +P++S LL+F L+++ WP NS + N C C+ GQ CGCTC+ D F D+ +Y FMED M + + GDQ+I D AR P GF Q
Sbjct: 116 VTVTLTDAGEKYALLVQQVEGDDGTVVAEQRVTISCKYVRRELRGLTIADRTGFFAAMREFYTVSLEEGRALYGDGFYDAKLMAAYHNT--RDYCFHNGMHFLNAHAAFDLWVESNLQKIDPKVSLPQWDYMLEAAHLGTEWGDSEIFGPDMFGSALGSPDNQFQISDGWFSNISSVYDPAGDLLSAEADISTNHNPYGFVGSTYNYQSIPGVSRTSSYCGLQGVSEFSKCEVFVGCFEDN-NSLYEWAVCMEHSVHASMHGMIGGGFNCNVNMAEFQEANPQFSPELLTFTLQFLLANKWPSNSLMEDFNYCDEDCAVGQTHPCGCTCITDPFEWTDDAIYDFMEDAMETLQLRAHGDQFIDEDRSARHPLGFAQ 488
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: Polyphenol (oxidase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z854_9STRA) HSP 1 Score: 276 bits (706), Expect = 1.550e-84 Identity = 150/376 (39.89%), Postives = 214/376 (56.91%), Query Frame = 1
Query: 22 VTVELERPGTVYFLSVE----IVDENGGVIAEGNSKVSCKYVRREIRNLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPDGALVDSRISP----YHNAYGYVTSDYNYQDLPRISRTSSFCGVPSHAVLATAETFVDCFDGGYTTLSGWESCMENMVHGDIHGLLGGAFSCNTDMRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQVYAFMEDFMTSASAKVQGDQYITY-DGDARF 1122
V V L PG Y L+V D V+A + ++C+YVRREIR L+ DR+ FLDA+ I Y + G+A+YG F +Y+ + A H+ D++ FCYH G QF+T+H AF++ +ER LQ IDP VSLP WDFM DS G WY S +FD+ FGSA G P ++ + SRF I +YDP G D ISP N +GY+TS N Q+ +SRT +FCGV LAT F CF+ Y +L+ + CME +H D+HG LGG ++C DM F ++ PE S L++F L Y+ W + C ++ + C CTC +D ++ D++VYA+ME+ + + + G ++T +G RF
Sbjct: 90 VDVVLTAPGHSYTLTVTEQLTATDGTTTVVASLAATIACRYVRREIRALSQVDRDRFLDALAILYFNSDEEGQAKYGDQFVSYERLCAMHD-DIK-FCYHGGQQFITAHWAFNMMVERSLQSIDPGVSLPYWDFMKDSDQLGSSWYMSEVFDETMFGSAIGLPTENFKLAPSRFRGIRNVYDPSG---DRVISPDFNVLRNGFGYITSPTNEQNATFVSRTHTFCGVTGSVALATCRDFAACFES-YDSLTDFRMCMETDIHADMHGWLGGGYNCAVDMAQFIQEVPEVSTELVTFALTYIVANTWHNTDYFAPYTECPSTDGCIDKSQCSCTCTLDVDSLTDDEVYAWMEEMLLAMTTIYDGADFVTASNGKLRF 459
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE6_9PHAE) HSP 1 Score: 196 bits (498), Expect = 9.620e-57 Identity = 94/112 (83.93%), Postives = 98/112 (87.50%), Query Frame = 1
Query: 832 MRTFSEDHPEYSAGLLSFVLEYMTFTFWPFNSFIPQANICQTSCSRGQERFCGCTCMIDAFAIDDEQV-------YAFMEDFMTSASAKVQGDQYITYDGDARFPYGFMQAR 1146
M TFSE HPEYSAGLLSFVLEYMTFTFWP NSFIPQAN+CQTSCS GQ+RFCGCTCMIDAFAIDDEQV YA+MEDFMTSAS K QGDQYI+YDGD RFPYGFMQAR
Sbjct: 1 MSTFSEAHPEYSAGLLSFVLEYMTFTFWPTNSFIPQANVCQTSCSTGQKRFCGCTCMIDAFAIDDEQVGWVGGWVYAYMEDFMTSASVKFQGDQYISYDGDVRFPYGFMQAR 112
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6J7_9PHAE) HSP 1 Score: 185 bits (470), Expect = 2.620e-54 Identity = 91/148 (61.49%), Postives = 107/148 (72.30%), Query Frame = 1
Query: 118 VSCKYVRREIRNLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPMWDFMIDSASFGHEWYNSVIFDKDWFGSAFGSPENSYAIPESRFSNISTIYDPD 561
VSC RREIR+LTDRDREAFLDAM+IWYTVPTD GKA+YGP++S+Y I A H DVE YH G+QFLTSHAAFDL +ERYLQMIDP+VSLP+W Y+SV+F DW+ SA G EN + + RF N+S IYDPD
Sbjct: 22 VSCN--RREIRDLTDRDREAFLDAMEIWYTVPTDGGKAKYGPNYSSYMSIAAIHGTDVETCSYHQGMQFLTSHAAFDLIVERYLQMIDPTVSLPVW-------------YDSVMFQPDWYESAMGDVENHFMVTGGRFGNVSAIYDPD 154 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig789.16048.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig789.16048.1 >prot_E_fasciculatus_S2_contig789.16048.1 ID=prot_E_fasciculatus_S2_contig789.16048.1|Name=mRNA_E_fasciculatus_S2_contig789.16048.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=382bp MPPFHCQVTVELERPGTVYFLSVEIVDENGGVIAEGNSKVSCKYVRREIRback to top mRNA from alignment at E_fasciculatus_S2_contig789:104..6373+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig789.16048.1 ID=mRNA_E_fasciculatus_S2_contig789.16048.1|Name=mRNA_E_fasciculatus_S2_contig789.16048.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6270bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig789:104..6373+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig789:104..6373+ >mRNA_E_fasciculatus_S2_contig789.16048.1 ID=mRNA_E_fasciculatus_S2_contig789.16048.1|Name=mRNA_E_fasciculatus_S2_contig789.16048.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1146bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig789:104..6373+ (Ectocarpus fasciculatus EfasUO2)back to top |