|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig787.16030.1 vs.
Match: Alpha-L-fucosidase, (family GH95 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT5_ECTSI) HSP 1 Score: 1004 bits (2595), Expect = 0.000e+0 Identity = 548/684 (80.12%), Postives = 572/684 (83.63%), Query Frame = 3
Query: 303 LFNPPPTPFDQTPKEQPSTATRKKPALLKSVYHSVDYKGGDIQGVGPLQVKDEQECRSLCVRDGRCLKWTLQLKEMVCWLKDAGGTRMEGVPGLTSGIVRDEADETIPKPKYGKEPXXXXXXXXXXXXXXXXPGVHALDLWDDEPGSDWTTSYALGNGYLGAMLGMGTFKDTMFMSHGSLWAGKGKLKTGGATSGFPLSPDRYEKFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAGELHLEFGGDDGEQTGGEREEGPVVDGYIRHLHLNNGTAEATFSSKGPPDSGGFGLGLGFGASRGQRERRLVHRREAFASNADGVLAMRLSCKEEESGRGCLSLVATPKRQGKSHFTEAGRLPXXXXXXXXXXXXXXXXXXTAGWGGGAYVSLYRPSGGSGEKVEMGFHVCVAVFPSVGEGSGVVTEKYVGPSSPRQRHRPEGP-DHKKTPEEDLMMARLADAPGGPPARNAGMMARLAEEGPAGGGXXXQGKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDETETEEGLRRRCLGRVEAAAALGFEELRRRHVEDVEGLFDRVHFSLGPSGGSTADGGAGGGKRRFNGGVNGMGGGESLSPDRSCVAGLPIRTRVARSGKACTEKGGEGAGVTGQGADNGGGGGLPERTVVDDGLVELMYHYGR 2351
L PPP P QTPKE+PSTAT KK LLKSVYHSVDYKGGDIQGVGPL V+DE+ECRSLCVRDGRCLKWTLQLKEM+CWLKDAGGTR EGVPGL SG+VRDE D+TIPKP+YGKEPXXXXXXXX GVHALD+WDDEPG+DWTTSYALGNGYLGAMLGMGTFKDTMFMSHGSLWAGKGKLK GGATSGFPLSPDRY+KFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAGELHLEFG G+Q GGEREEGPV DGYIRHLHLNNGTAEATFSSKGPPDSGGFGLGLGFGASRGQRERRLVH REAFASN DGVLAMRLSCKEEESGRGCLSLVATPKRQGKSHFT AGRLPXXXXXXXXXXXXXX T GWG GAYV LYRPSG +GEK EMGFHVCVAVFPSVGEGSGVVTE+YV PSSPR+RHRPEGP K+TPEE LMMARLADAPGGPPARNAGMMARLAE GP+ GG QG + +DETE GLRRRCL RVEAAA LGFEELRRRHVEDVEGLFDRVHFSLGPS GGA GG+RR NGG +G+G ES+SP RSCVAGLPIRTRVARSGKACTEKGGEGAG+TGQG DNGGGGGL ERT+VDDGLVELMYHYGR
Sbjct: 119 LQRPPPLPSIQTPKERPSTATGKKTTLLKSVYHSVDYKGGDIQGVGPLNVEDEKECRSLCVRDGRCLKWTLQLKEMICWLKDAGGTRNEGVPGLRSGVVRDEEDKTIPKPRYGKEPXXXXXXXXPDAAAEPPAGVHALDVWDDEPGADWTTSYALGNGYLGAMLGMGTFKDTMFMSHGSLWAGKGKLKAGGATSGFPLSPDRYDKFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAGELHLEFGEGGGQQAGGEREEGPV-DGYIRHLHLNNGTAEATFSSKGPPDSGGFGLGLGFGASRGQRERRLVHHREAFASNVDGVLAMRLSCKEEESGRGCLSLVATPKRQGKSHFTTAGRLPXXXXXXXXXXXXXXAGGDTVGWGAGAYVGLYRPSGRNGEKAEMGFHVCVAVFPSVGEGSGVVTEEYVDPSSPRERHRPEGPAGDKETPEEKLMMARLADAPGGPPARNAGMMARLAE-GPSRGGPS-QGNAGQAPPTRNPTPRHRIALSAAEASSEAMMLVSVVTEEKARDDDGDDETE---GLRRRCLARVEAAAGLGFEELRRRHVEDVEGLFDRVHFSLGPS---VPGGGAAGGERRLNGGDSGVGDRESISPSRSCVAGLPIRTRVARSGKACTEKGGEGAGITGQGPDNGGGGGLAERTIVDDGLVELMYHYGR 793
BLAST of mRNA_E_fasciculatus_S2_contig787.16030.1 vs.
Match: GH95 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q6_9PHAE) HSP 1 Score: 567 bits (1461), Expect = 9.190e-195 Identity = 286/347 (82.42%), Postives = 296/347 (85.30%), Query Frame = 3
Query: 300 LLFNPPPTPFDQTPKEQPSTATRKKPALLKSVYHSVDYKGGDIQGVGPLQVKDEQECRSLCVRDGRCLKWTLQLKEMVCWLKDAGGTRMEGVPGLTSGIVRDEADETIPKPKYGKEPXXXXXXXXXXXXXXXXPGVHALDLWDDEPGSDWTTSYALGNGYLGAMLGMGTFKDTMFMSHGSLWAGKGKLKTGGATSGFPLSPDRYEKFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAGELHLEFGGDDGEQTGGEREEGPVVDGYIRHLHLNNGTAEATFSSKGPPDSGGFGLGLGFG--ASRGQRERRLVHRREAFASNADGVLAMRLSCKEEESGRGCL 1334
LL P P +TPKE+PSTAT KKPALLKSVYHSVDYKGGDIQGVGPL V+DE+ECRSLCVRDGRCLKWTLQLKEMVCWLKDAGGTR E VPGLTSG+VRDE D TIPKP+YGKEP GVHALDLWDDEPGSDWTTSYALGNGYLGAMLGM TFKDTMFMSHGSLW+GKGK K GGAT FPLSPDRY+KFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAGEL LEFG G+Q GGERE+GPV DGYIRHLHLNNGTAEATFSSKGPPDSGGFGL SRGQRE RLVHRREAFASN DGVLAMRLSCKEEESGRGCL
Sbjct: 39 LLHPPTPLRSIRTPKERPSTATVKKPALLKSVYHSVDYKGGDIQGVGPLNVEDEKECRSLCVRDGRCLKWTLQLKEMVCWLKDAGGTRNEDVPGLTSGVVRDEEDTTIPKPRYGKEPPPPPLQCCPDAAGEPPAGVHALDLWDDEPGSDWTTSYALGNGYLGAMLGMRTFKDTMFMSHGSLWSGKGKHKAGGATFDFPLSPDRYDKFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAGELLLEFGEGGGQQAGGEREKGPV-DGYIRHLHLNNGTAEATFSSKGPPDSGGFGLXXXXXXXTSRGQREGRLVHRREAFASNVDGVLAMRLSCKEEESGRGCL 384
BLAST of mRNA_E_fasciculatus_S2_contig787.16030.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P7_9PHAE) HSP 1 Score: 369 bits (948), Expect = 2.310e-110 Identity = 229/338 (67.75%), Postives = 239/338 (70.71%), Query Frame = 3
Query: 1341 VATPKRQGKSHFTEAGRLPXXXXXXXXXXXXXXXXXXTAGWGGGAYVSLYRPSGGSGEKVEMGFHVCVAVFPSVGEGSGVVTEKYVGPSSPRQRHRPEGP-DHKKTPEEDLMMARLADAPGGPPARNAGMMARLAEEGPAGGGXXXQGKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDETETEEGLRRRCLGRVEAAAALGFEELRRRHVEDVEGLFDRVHFSLGPSGGSTADGGAGGGKRRFNGGVNGMGGGESLSPDRSCVAGLPIRTRVARSGKACTEKGGEGAGVTGQGADNGGGGGLPERTVVDDGLVELMYHYGR 2351
VATP RQGKSHFTE GRLPXXXXXXXXXXXXXX TAGWG GAYV LYRPSG +GEK EMGFHVCVAVFPSVGEGS VV E+YV PSSPRQRHRPEGP ++TPEE LMMARLADAPGG PARN GM GG QG + NDETE GLRRRCLGRVEAAA LGFEELRRRHVEDVEGLFDRVH SLGP DGGA GG+RR +GG NG+ GGESLS RSCVAGLPIRTRVAR+GKACTE GGEGAG+TGQG DN GGGG ERTVVDDGLVELMYHYGR
Sbjct: 43 VATPNRQGKSHFTEGGRLPXXXXXXXXXXXXXXAGGDTAGWGAGAYVGLYRPSGRNGEKAEMGFHVCVAVFPSVGEGSRVVAEEYVDPSSPRQRHRPEGPAGDEETPEEKLMMARLADAPGGAPARNVGMXXXXXXXXXXGG--PAQGNAGQAPPTRNPTPRHRISLSAAEASSEAMMLVSVVTEEKARDNDGNDETE---GLRRRCLGRVEAAAGLGFEELRRRHVEDVEGLFDRVHLSLGPI---VPDGGAAGGERRLDGGDNGVEGGESLSRSRSCVAGLPIRTRVARAGKACTEGGGEGAGITGQGLDNEGGGGRAERTVVDDGLVELMYHYGR 372
BLAST of mRNA_E_fasciculatus_S2_contig787.16030.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVL2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.720e-14 Identity = 88/326 (26.99%), Postives = 131/326 (40.18%), Query Frame = 3
Query: 405 VDYKGGDIQGVGPLQVKDEQECRSLCVRDGRCLKWTLQLKEMVCWLKDAGGTRMEGVPGLTSGIVRDEAD-ETIPKPKYGKEPXXXXXXXXXXXXXXXXPGVHALDLWDDEPGSDWTTSYALGNGYLGAMLGMGTF-------KDTMFMSHGSLWAGKGKLKTGGATS------------------GFPLSPDRYEKFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAGELHLEFGGDDGEQTGGEREEGPVVDGYIRHLHLNNGTAEATFSSKGPPDSGGFGLGLGFGASRGQRERRLVHRREAFASNADGVLAMRLSC 1304
+D +GGDIQ V PL++ E EC + C +C WT + CWLK G R+ +TSG++R+ E +P+ P L L+ DW+ ++ LGNG LGA++G+ + ++T+F + K K + AT P +P +E F+ +R +LL+G++ AAQEAA + P V SFE L+ E E V Y R L+L A A F + + ++REAF S AD VL +R C
Sbjct: 129 IDLRGGDIQNV-PLKMNAE-ECCNACAARSQCAAWTAVENDGSCWLKGRLGRRI-AAKSMTSGLLRNAIQIEAVPEVPQAVMPREARKKQSVRPHCRHT-SKDELRLFYKAAARDWSEAFPLGNGKLGALVGLEPWSGRVAIAEETLFERRSDIEEAKAKRQAREATERAARAEKNKSTADDKKWLSKPATP--FEAFQISRNALLNGNIKAAQEAARWLDAGP---VPSFEGLATLNFEVSPSLSE-----------VLNYERSLNLEAAVASARFQAT--------------------NNTIVNYKREAFVSAADNVLVLRFEC 414
BLAST of mRNA_E_fasciculatus_S2_contig787.16030.1 vs.
Match: Glyco_hyd_65N_2 (domain-containing protein n=5 Tax=Herpotrichiellaceae TaxID=43219 RepID=A0A0D2CFV1_9EURO) HSP 1 Score: 69.3 bits (168), Expect = 2.190e-8 Identity = 62/219 (28.31%), Postives = 93/219 (42.47%), Query Frame = 3
Query: 699 PGVHALDLWDDEPGSDWTTSYALGNGYLGAMLGMGTFKDTMFMSHGSLWAGKGKLKTGGATSGFPLSPDRYEKFRSARESLLD-GDVHAAQEAAGRMPTSPEGFVGSFEYAGELHLEFG----GDDGEQTGG-----EREEGPVVDGYIRHLHLNNGTAEATFSSKGPPDSGGFGLGLGFGASRGQRERRLVHRREAFASNADGVLAMRLSCKEEESGR 1325
P H LW + P WT + +G G LGAM+ G D ++M+ S+W G + + PL+ D + R LLD V AQE R T+ + + G++++ FG DD + G +R P + YIR L L A A ++ +G + + RE FAS AD V+A+R+SC +S R
Sbjct: 3 PPEHDRVLWYEHPAKIWTEALPIGTGRLGAMIKGGLDVDRLWMNEDSVWYGGPQNRVN------PLAKDSLPEVRR----LLDLNQVQEAQELLKRTFTALPSSLRHYSPLGDVYMTFGHGTPSDDKKDFSGIPDQTKRAVRPAAESYIRRLDLTTAIASARYTFEG-----------------------VEYLREYFASTADEVVAVRISCNRTDSLR 188
BLAST of mRNA_E_fasciculatus_S2_contig787.16030.1 vs.
Match: Glycoside (hydrolase family 95 protein n=2 Tax=Acidipila dinghuensis TaxID=1560006 RepID=A0A4Q1SCT3_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 1.570e-5 Identity = 57/205 (27.80%), Postives = 79/205 (38.54%), Query Frame = 3
Query: 720 LWDDEPGSDWTTSYALGNGYLGAMLGMGTFKDTMFMSHGSLWAGKGKLKTGGATSGFPLSPDRYEKFRSARESLLDGDVHAAQEAAGRMPTSPEGFVGSFEYAG------ELHLEFGGDDGEQTGGEREEGPVVDGYIRHLHLNNGTAEATFSSKGPPDSGGFGLGLGFGASRGQRERRLVHRREAFASNADGVLAMRLSCKEEE 1316
LW P W + LGNG LGAM+ G ++ + +S + W+G A + ++P E R L AQ + + VGS + G EL LEF E G V Y R L LN A+ + + G + REAFAS+ADGVL MR+SC ++
Sbjct: 19 LWYSRPADTWLEAIPLGNGRLGAMVFGGMQRERIALSESTAWSG--------AAATGDVNPGAREHLEEIRRLLFAEKYDEAQVLSSKY------LVGSMKNFGTNLPLPELLLEF------------ESGAEVTEYQRSLRLNEAIAQVRWMAHGDR-----------------------YEREAFASHADGVLIMRVSCNRKK 174
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig787.16030.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 6
| Match Name | E-value | Identity | Description | |
| Alpha-L-fucosidase, | 0.000e+0 | 80.12 | family GH95 n=1 Tax=Ectocarpus siliculosus TaxID=2... | [more] |
| GH95 | 9.190e-195 | 82.42 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Uncharacterized | 2.310e-110 | 67.75 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Hypothetical | 1.720e-14 | 26.99 | protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... | [more] |
| Glyco_hyd_65N_2 | 2.190e-8 | 28.31 | domain-containing protein n=5 Tax=Herpotrichiellac... | [more] |
| Glycoside | 1.570e-5 | 27.80 | hydrolase family 95 protein n=2 Tax=Acidipila ding... | [more] |
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 1 |
| Seed ortholog score | 878.6 |
| Seed ortholog evalue | 1.6e-252 |
| Seed eggNOG ortholog | 2880.D7FKT5 |
| Model size | 2351 |
| Hectar predicted targeting category | other localisation |
| Exons | 11 |
| EggNOG free text desc. | 1,2-alpha-L-fucosidase activity |
| EggNOG OGs | 2CMG6@1,2QQ9E@2759 |
| Ec32 ortholog description | Alpha-L-fucosidase, family GH95 |
| Ec32 ortholog | Ec-17_001310.1 |
| Cds size | 1824 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842447.4197538-CDS-E_fasciculatus_S2_contig787:214..913 | 1696842447.4197538-CDS-E_fasciculatus_S2_contig787:214..913 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig787 215..913 - |
| 1696842447.440695-CDS-E_fasciculatus_S2_contig787:1421..1737 | 1696842447.440695-CDS-E_fasciculatus_S2_contig787:1421..1737 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig787 1422..1737 - |
| 1696842447.4494786-CDS-E_fasciculatus_S2_contig787:2244..2437 | 1696842447.4494786-CDS-E_fasciculatus_S2_contig787:2244..2437 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig787 2245..2437 - |
| 1696842447.4582012-CDS-E_fasciculatus_S2_contig787:3160..3396 | 1696842447.4582012-CDS-E_fasciculatus_S2_contig787:3160..3396 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig787 3161..3396 - |
| 1696842447.4759703-CDS-E_fasciculatus_S2_contig787:4293..4388 | 1696842447.4759703-CDS-E_fasciculatus_S2_contig787:4293..4388 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig787 4294..4388 - |
| 1696842447.4855597-CDS-E_fasciculatus_S2_contig787:4885..4995 | 1696842447.4855597-CDS-E_fasciculatus_S2_contig787:4885..4995 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig787 4886..4995 - |
| 1696842447.4950538-CDS-E_fasciculatus_S2_contig787:5608..5719 | 1696842447.4950538-CDS-E_fasciculatus_S2_contig787:5608..5719 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig787 5609..5719 - |
| 1696842447.5043776-CDS-E_fasciculatus_S2_contig787:6361..6425 | 1696842447.5043776-CDS-E_fasciculatus_S2_contig787:6361..6425 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig787 6362..6425 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842447.5135403-UTR-E_fasciculatus_S2_contig787:6425..6488 | 1696842447.5135403-UTR-E_fasciculatus_S2_contig787:6425..6488 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig787 6426..6488 - |
| 1696842447.5224912-UTR-E_fasciculatus_S2_contig787:6928..7108 | 1696842447.5224912-UTR-E_fasciculatus_S2_contig787:6928..7108 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig787 6929..7108 - |
| 1696842447.5313058-UTR-E_fasciculatus_S2_contig787:7368..7550 | 1696842447.5313058-UTR-E_fasciculatus_S2_contig787:7368..7550 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig787 7369..7550 - |
| 1696842447.5449052-UTR-E_fasciculatus_S2_contig787:7867..7969 | 1696842447.5449052-UTR-E_fasciculatus_S2_contig787:7867..7969 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig787 7868..7969 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig787.16030.1 >prot_E_fasciculatus_S2_contig787.16030.1 ID=prot_E_fasciculatus_S2_contig787.16030.1|Name=mRNA_E_fasciculatus_S2_contig787.16030.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=608bp
MVCWLKDAGGTRMEGVPGLTSGIVRDEADETIPKPKYGKEPPPPPVPCCP HAAAEPPPGVHALDLWDDEPGSDWTTSYALGNGYLGAMLGMGTFKDTMFM SHGSLWAGKGKLKTGGATSGFPLSPDRYEKFRSARESLLDGDVHAAQEAA GRMPTSPEGFVGSFEYAGELHLEFGGDDGEQTGGEREEGPVVDGYIRHLH LNNGTAEATFSSKGPPDSGGFGLGLGFGASRGQRERRLVHRREAFASNAD GVLAMRLSCKEEESGRGCLSLVATPKRQGKSHFTEAGRLPPPPPLRARRH ENGGAGGDTAGWGGGAYVSLYRPSGGSGEKVEMGFHVCVAVFPSVGEGSG VVTEKYVGPSSPRQRHRPEGPDHKKTPEEDLMMARLADAPGGPPARNAGM MARLAEEGPAGGGGPAQGKSRQAPPTRNPPPRHRIVLSAGEASSEAMVLV SVVAEEKARDDGGNDETETEEGLRRRCLGRVEAAAALGFEELRRRHVEDV EGLFDRVHFSLGPSGGSTADGGAGGGKRRFNGGVNGMGGGESLSPDRSCV AGLPIRTRVARSGKACTEKGGEGAGVTGQGADNGGGGGLPERTVVDDGLV ELMYHYGR back to topmRNA from alignment at E_fasciculatus_S2_contig787:215..7969- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig787.16030.1 ID=mRNA_E_fasciculatus_S2_contig787.16030.1|Name=mRNA_E_fasciculatus_S2_contig787.16030.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7755bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig787:215..7969- (Ectocarpus fasciculatus EfasUO2) GTTAGACGTACCTCTGGAGGGAGGCGGGCGCGCAGTGGGTCCCCGCTTGT
CTGGATTGCCTCCGCAGGGGTACTAGTCCTCCTCAGCTTTTGGGCAGGGT
TGGTGAGTGGGCCTGTCGCCAAAATTCTTGCCTCTTTTGTGGCCACTGAC
TAACGTGCACCTTTGCAGGTCAGTGCTGGTGTGATAGTTCATGGCTGCGT
TTTTATTTTTTGAAAGATGATATAATATCAGTGTTGCAGTTTTGGCCCCT
CCAAACGTGAACTATATCAAATCCGCTACAGCAACTATCGGCTGTGCTTG
TACGGATTTTTGGATTCCCAAGCACCAAGATCGAGCAAGGATGTTCCCAG
CCAGCGTATTTGATACCATGCTCAGGTGAATTGCACACAAACCTTGCACG
CCCTACAACACTTGTGCAGGTGATCCAGTTGACACGCCTTTCACGAGAAA
ACGACGAGAAGCCTCTTGTCAACGTGGCTCCGCAAGAATACAGGAGGGGG
GTACGGGGCATGGGGGAAGGTGGAGGGCGCATATCCTCGCCTTCAAAAGG
CGACGGTGGCGTCGGCGGGACTGGCAGGGACGAGGTGCGAATTGATTCAA
CGTAGACCAAGGAGTTCGACAATTCTCTGGCGTTCCTGGGCGAGAACATG
GGGGGGCGGTTGCAAATTCCCGGGCCGTGTGTTTATAATGGCACGACCAC
GGTTGAGTTGAACAAGGTGGTGATGGAGTTTTGAACGGCCACTCCGATGG
TGATTGTGGTTCAGAGAGAACACGATAGACCGCAAAATGGACAGAGCATA
CACAACCTTTGAGTTGTTTTTTGTTTGGTGTCGCTTGCCACGCTCCTCTC
CGACTATTAAGTATCGTCACCACCACCTCCTCTTTAACCCCCCCCCCACT
CCCTTCGACCAGACACCCAAGGAGCAGCCGTCCACGGCAACAAGAAAAAA
ACCTGCGCTGCTGAAAAGCGTCTACCACAGCGTCGACTACAAGGGAGGAG
ACATCCAAGGAGTCGGGCCTTTGCAAGTCAAGGACGAGCAGGTCGGCGAG
ACTCTTGCGGTTTCATTTCGTTTCGGATGCCGTGAAAACACGCCACCCTT
GACGCCTCGTCGAAGCGTGTCTTTGTTTGTTTTTCTTGGTTGGCTCCTCT
GCTGGGTATGCGGCTTCGTGACCCCCGCCCCCCCCCGCCGTAACCCCCGC
GTGCGATTGTTCGGCTGTCGAACCTACGGGTGGTGCGGGGAGAACACACA
TGTGGAAGAGTCTCGATCTGTAGACGTTTTACAGGGTGCGTTCGAGTCAT
CATCTGTTGGCCACGAGGACACCAGCGTGTGCGCTGGCTGCTCGAAAATC
CTGCGTGGATGCAACTGTCCCGGTTGAATGTTTTCGCCTTGCCCCGGGGT
CGCTTGCTCTCTCCCTTTCACATACCATCTTGAAACTGCTCGTGCTGATG
CTTTTTCCTTTGTGTGTGCGTGTGTGTGTAGGAATGTCGATCGCTCTGCG
TGAGGGACGGGCGCTGCCTCAAGTGGACCCTGCAGTTGAAGGAGATGGTC
TGCTGGCTTAAGGACGCGGGGGGCACGCGAATGGAAGGCGTCCCAGGGTT
GACGTCAGGTGAGTATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCGGCCCCCGCCCCCCCCCCCCCCCGCCCC
ACACCAAACACCACCCCACCCCCACCACCNNNNNNNNNNCCCGTGGCGGG
GGGGGTTGTGTGCGGGGTTGAGGGAGCGCGGGGGCCGGCGAAGGAGGGCG
GCCAAGGGGTGGCGGGACGTTATGGTCCTCCCCCCCCCCCCCCCCCTCCC
CGCGTCAACCTCGCGCGTGCGTGCTGCTTGTGGGGGAAGGCACTAGTCGA
AATGAGAAAGACAGCTTGCCGCCGGTTGGTGTTCTGTGCAGAGCCGTACG
TAGCAACACTGCACGGATAGAAAAAACGCATATACTCTATCAGATAGGTA
GGCAGCGGCCACGTGTAGGCACGTGTTGTAAGCCTTGCTGTTTTTTGTTG
CATGACTTGTCCGATTTCGAGCGAGAGTGTCCAACACGTTTTGTCCCGAA
CTCGCCCCTGTTCTTGGCCTATCTCATCCAACAGAGAAAGCACCGTGTGC
GTCCGCTCATGTCCGTCCAGCCAAGAAACCCACACTGACCTACAATGTAA
CATTCGCCACCCCCTTTCCCCATGCATGTTCTGCTTGTGTCCTGTGATAG
GCATCGTCAGAGATGAGGCAGATGAGACCATCCCGAAGCCAAAGTACGGC
AAGGAACCCCCTCCGCCGCCGGTACCGTGTTGCCCTCACGCTGCCGCGGA
GCCTCCCCCTGGTGCGTGTTGCTGTCGTGGTCGTGATCTTCGTTGGATGG
TGTCTTCGCTGTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTATCGTCG
CTGCTATCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCTGCGTTGAA
TGGTGCCGTTGCTGTTATGGTCGCTGTTGATGTTGCTTCTGCTGGCGTTG
TTGCCATAGTTGAAATGCTGTTGTCGTTGTCACCATCACCATTGTTTGTT
GCCGTCATCGTCGTAGTTTAAAGTTGTGGTCCTTGTGAAAACAGTCGTGA
CCTCTACCAGGTAGGTAGTGAGCCTACATGCCAAAGTCCAAACGGCAAGC
CACCGATGTAAAATAATATGTACATTTGATGAGGGTTCTTGGTGACAGAT
TTGAACTCGATCCACTCATGCGTTGATTTGGAGGTCTTTGTGCACCAACA
GTTGTCATTTCTGGATTCTTTCTAGCGAAAACCGGCCAAAATTCGCGTAC
ATCAATATCAATCCCGGCGTACCTGTTAAGAACGCTGGAGGAGCGGAACA
GGTCTCTCATTCCCCACCCCCAGAACAATCATAAGCATGTCCGCTCTTTT
TTGTGACCCTTTCTGCTATTTTAGGTGTCCATGCCCTGGATCTTTGGGAT
GACGAGCCTGGTTCGGATTGGACGACGAGCTACGCCCTGGGCAACGGGTA
TCTTGGGGCGATGCTGGGCATGGGGACCTTTAAGGTGCGGTAGCGAAGAA
AAATTTCAAGTAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGC
GCCAGGCTTTGGTGCTTTCGAGCGCAACATCTCACGTACCATACACTAAA
CGAGAGCCGCTCTTGTCTCCCCCCACAGCTAATGCGTCTGACACGGACGT
TGAGTCGGACATGACATGCCATGCATCACTTCCTTCTCCTGTCGGGAAGC
CGGGTTTGCCTTGCGTGAGTATATGGTCATACCGGAGAACGTGTTTCTTT
TTTGGGAAAACAACAATTTCGCCTCTATCCATGGGGTGAACATACAGGTC
TCTATCCAACGGTGAAAGTGCAGGAAACAAAAGGCGACGTATTGTCGGAG
AATTGTCTAGAAAAATTTCCTCTTCCTTTTGTAGTTTTTTTACTCCCCAT
CACATCCAGCTCGCCCCTGAACGAACCTCAGGACACGATGTTCATGAGCC
ATGGCAGCCTCTGGGCGGGAAAGGGAAAACTGAAGACCGGTGGGGCTACC
TCTGGTTTCCCACTGTCTCCGGACAGGTGGGCAACTACGGTACACAACAG
CATCAAAACATACACACCTCGTCGAAATGACTTGGTTTTAGTGGTGAATT
TGACTTGTCATTCGCTGCAACAGAGTTCCCGTATCCGTTGTTTAGCCTCA
CCAACGTTTGCACAAAATGGAAGTGCTGACACTTTCGCCTCAATTTTTTC
CACATGGCGCTTTTCGCTAGTTGTGACGTTCAGCTTTTTGTGCGGTGGTA
GTGGGATTGGTTCCATTCAGAACGACGTTTCATTCAGAACGACGTTTCCC
CGGCCCTGAACGTCGGCGACACAGTGCGCTCCAGGTCTGTTGTACGTACT
GTACTCTTAGGCACCGGTTCGTTCGTCGTCGCGTGCGCCATAAGCTTGCT
TGGTGTTTTTGTGGTCGAAAGTAGGCCAGACCCAGTCATGACGGGGAAAA
GGAACGCGTAGCGTGTAGCTCAACGAATCTCGGGAGCATCAGCCAGCAGC
TCAAGCGTTCAAGGCACCTAGCCGGGTGTCGTTGCATCCCTCCGAGCGAA
CAGCCAAAGTACCTCTGGCCGTTCTCCTTCGGTTTCGATTCGATTCGATT
CGATTCGATTCGATTCGATTCGATTCCTTACGGTTTCATTCCACGTTGGG
TGCCCTTGCGACTCGTGGCACTGGCTGCTATTCACGTAGTGTAGGTAACG
TTGCCGCGACTAAGCCGCGGATCGCCATGACCAAGCGGTGCTTGGCAGTG
CATACACACCGCCGCCCCACCTGTAGTGTAGTGGACGTTCCCAGCGCAGC
GCCAATACCACCTCAATAGCTCAATACCGTGCCGGGTGCCACGGTCTTGT
CTTGTCCCCCCGTGCTGCCCCCAAAACCTCACTACGGGGCCCCCTTTCTT
TTTTTTGTCCACTTCCACCAAAGGTATGAGAAATTTCGGAGTGCACGGGA
ATCGCTCCTCGATGGAGATGTCCACGCTGCCCAGGAGGCCGCGGGCCGCA
TGCCCACCAGCCCAGAAGGCTTCGTGGGGTCTTTCGAGTATGCGGGGGAA
CTGCACTTGGAGTTCGGCGGAGACGACGGTGAGCAGACGGGAGGGGAGCG
GGAGGAGGGGCCCGTCGTGGACGGGTACATTCGACACCTGCACCTCAACA
ACGGCACCGGTGAGGTTCGTGTGTTGGTATGTGTGTATTCGCCACATCTT
ATCTGGCGCCAGGTTGTTCCTTTCGGTACACTTGGTGTACCAGCCAGGGT
CACCCAGGAAGATCGTGGCGCAGACACTTTTTTTTTCTTTAATTCACCTT
CCCCGCTGCTATATATTTTATTTACGTCTTGTTTTCTTCGAGTCCAGTCA
AGACTTGTTCTGCGTATTGGTATGTGTACACCCTCGTCATGGGGAACCCA
TCTTGTCAGCCGATAGCCGCTACTCATCGGAGTGTACACCACCCCCTGTC
GTCGCCGTTTGGTGGTGAAGCCGAGGATGGATTGTCTCTCACTCACGGCG
AATAATGTACTCGTCACCCCCTCTGTCGTGTCTTTTATATTTGTTGCCGA
ACCCATGCTTCCGCGGGTGTGGTTTTGTCCAAGCAGAAGCTATCTTTCGT
GTATGTTGTAATTTTCGCTCCCTTCCCTCGTCGCCGTTTTTGCCCTTTGA
TGATTTGACTTGCCCTCCCCGCCCTTGTATCCAAGCGAACCCGGCCGGGG
TGACCGCCCCCCCCCCCGCCCCCGTGTTGTTTTCGACTATTTTCTTCGCC
CAAAAATCCGTTCCTCAGGTTTCACGCCCCTTTTGCATTCCGGGTAATTC
TTTTTTCTTAGTCGGAAACGTTCTTGCAGCAACTTTTCATCCATCGGTTT
CACCCCCGTCTTCGTTGTCTTGTCGTGTTTAGCGGAGGCCACATTCAGCT
CTAAGGGTCCGCCTGACAGCGGCGGGTTCGGCCTCGGCCTCGGCTTTGGC
GCAAGCAGAGGCCAGCGCGAGCGCCGCCTTGTTCACCGCAGGGAGGCGTT
TGCCAGCAACGCGGACGGCGTGCTGGCGATGCGCCTGAGCTGCAAGGAGG
AGGAGAGCGGGAGAGGCTGCTTAAGGTGAGTAAGTGCGACACGCATCTTC
CTTCTTAGGTACACTGCTTTGTGCGTGTTGTACAGACTGGTGGACTTGAG
GGGAAGGAGGAGACTTTTGTCGGGTTAAGGGCCTTGCCTGGTGTTTGCGC
TATTGGCTTCGAAGCTGCAGGGTGAGGGGGTGGGGGGGACGCAGGCCGGC
GGGGTGCATGCGACAAGAACCAAACGGCTGGTGCGAGTGAGAACATCGGT
TCGGTTCTTTTGTTTCGTCGAGAGGAAATACGCCGGGGTTCGCTGATGAA
CGCTGACTAATGAAGGTGCTAGCCGTCCTCTCTCTCTTGTTTGTACAGAG
GGGTCCCTCCCGAGAGCAGGGATACACACAGCCAACGACCAACTCATGAG
AGTGAGACGCAGCGGGAAAAAATGGATACAAACCTACAGCGATGGGGGAT
CCATTGTGCTTTCGGATGTATATACCCCCCTCACCCCCCTCACCCCTCCC
CTCCGTTCGCGTGCCCGTGCCCCCATACACAGCCTCGTGGCGACGCCGAA
GCGGCAAGGAAAATCGCACTTTACCGAGGCAGGTCGACTCCCCCCGCCGC
CTCCACTGCGAGCTCGACGCCACGAAAACGGAGGGGCCGGCGGGGACACG
GCGGGCTGGGGCGGAGGCGCTTACGTCAGTCTTTACCGGCCCTCCGGGGG
GAGCGGCGAGAAAGTCGAGATGGGTTTCCACGTCTGTGTGGCGGTGTTCC
CGTCGGTCGGGGAGGGGTCGGGGGTCGTCACGGAGAAGTACGTCGGTCCG
AGTTCGCCGCGTCAGCGACATCGCCCCGAAGGGCCTGATCACAAGAAGGT
AGATCGACACCCCATGCCGTGTACTCGTACTTGCGTTGAAGTGCTGTCGT
CTATCCGCGTCTCGTCGCCGAGTCGAGTGGTCGGCTGCTGCGTTGCTCTG
CCGTTGGTGCTGAAGACCCTTTTCCCTCGAACGAAACATGGGGGGTGGAA
CGTAGGGGGGCGGTGGGTTTTGCTCCGATAGTTTAGCGTCGCGAATATTT
ACTTGTCGGTCACGGCGTGTTTCGACAAGTGCCCTCCAACAATGGAACCT
TTGTTTTCGTTGTTTTCGCTTTCCCGACCGGTGCTAGGCACTTGTCTGAG
CGAGGCTCCTTCAGCACAAGCGTCAGGTCACAAATTTCCTGAACCCCTTT
TCTTACTCGTCGGAAAGCCAGCCAGCAATGGCGCCCAGTTTTTTCTTTCA
GCCCGTGGTGAAGACATCGCCAACGCTCCTTCCTCTCGTGCAGGTCCCAT
GAAGGCAGAACTCAGACTCATTCTCCCCTGCTCCCTCCCATCCGTCCCAT
GCACAGACTCCCGAGGAAGACCTCATGATGGCGAGACTGGCCGATGCTCC
CGGCGGCCCCCCGGCCCGAAACGCGGGCATGATGGCGAGGCTGGCAGAAG
AAGGTCCCGCCGGCGGCGGGGGGCCCGCGCAAGGGAAATCCAGGCAGGCA
CCACCCACCCGGAACCCGCCCCCGAGACACAGGATCGTTCTCTCCGCCGG
CGAGGCGAGCAGCGAGGCCATGGTGTTAGTCTCGGTCGTCGCCGAGGAGA
AAGCGCGAGACGATGGCGGCAATGATGAGACGGAGACGGAGGAAGGACTG
CGACGGCGGTGCCTGGGCAGGGTGGAGGCGGCGGCGGCGTTGGGTTTCGA
GGAACTCAGGAGGCGGCACGTCGAAGACGTGGAGGGGCTGTTCGACCGTG
TTCACTTCTCGCTCGGCCCCAGCGGTGGTAGCACCGCTGACGGTGGTGCT
GGTGGCGGGAAGAGAAGATTTAACGGTGGAGTGAATGGGATGGGAGGCGG
AGAGTCGCTTTCACCTGATAGGTCTTGCGTCGCTGGGCTGCCTATCAGAA
CCAGGGTTGCGAGGTCGGGGAAGGCGTGTACGGAGAAAGGAGGGGAGGGC
GCGGGTGTCACGGGACAGGGGGCGGATAATGGAGGGGGGGGAGGGCTGCC
CGAGCGAACGGTTGTGGATGACGGTCTGGTCGAGCTCATGTACCACTACG
GCAGG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig787:215..7969- >mRNA_E_fasciculatus_S2_contig787.16030.1 ID=mRNA_E_fasciculatus_S2_contig787.16030.1|Name=mRNA_E_fasciculatus_S2_contig787.16030.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1824bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig787:215..7969- (Ectocarpus fasciculatus EfasUO2) ATGGTCTGCTGGCTTAAGGACGCGGGGGGCACGCGAATGGAAGGCGTCCC AGGGTTGACGTCAGGCATCGTCAGAGATGAGGCAGATGAGACCATCCCGA AGCCAAAGTACGGCAAGGAACCCCCTCCGCCGCCGGTACCGTGTTGCCCT CACGCTGCCGCGGAGCCTCCCCCTGGTGTCCATGCCCTGGATCTTTGGGA TGACGAGCCTGGTTCGGATTGGACGACGAGCTACGCCCTGGGCAACGGGT ATCTTGGGGCGATGCTGGGCATGGGGACCTTTAAGGACACGATGTTCATG AGCCATGGCAGCCTCTGGGCGGGAAAGGGAAAACTGAAGACCGGTGGGGC TACCTCTGGTTTCCCACTGTCTCCGGACAGGTATGAGAAATTTCGGAGTG CACGGGAATCGCTCCTCGATGGAGATGTCCACGCTGCCCAGGAGGCCGCG GGCCGCATGCCCACCAGCCCAGAAGGCTTCGTGGGGTCTTTCGAGTATGC GGGGGAACTGCACTTGGAGTTCGGCGGAGACGACGGTGAGCAGACGGGAG GGGAGCGGGAGGAGGGGCCCGTCGTGGACGGGTACATTCGACACCTGCAC CTCAACAACGGCACCGCGGAGGCCACATTCAGCTCTAAGGGTCCGCCTGA CAGCGGCGGGTTCGGCCTCGGCCTCGGCTTTGGCGCAAGCAGAGGCCAGC GCGAGCGCCGCCTTGTTCACCGCAGGGAGGCGTTTGCCAGCAACGCGGAC GGCGTGCTGGCGATGCGCCTGAGCTGCAAGGAGGAGGAGAGCGGGAGAGG CTGCTTAAGCCTCGTGGCGACGCCGAAGCGGCAAGGAAAATCGCACTTTA CCGAGGCAGGTCGACTCCCCCCGCCGCCTCCACTGCGAGCTCGACGCCAC GAAAACGGAGGGGCCGGCGGGGACACGGCGGGCTGGGGCGGAGGCGCTTA CGTCAGTCTTTACCGGCCCTCCGGGGGGAGCGGCGAGAAAGTCGAGATGG GTTTCCACGTCTGTGTGGCGGTGTTCCCGTCGGTCGGGGAGGGGTCGGGG GTCGTCACGGAGAAGTACGTCGGTCCGAGTTCGCCGCGTCAGCGACATCG CCCCGAAGGGCCTGATCACAAGAAGACTCCCGAGGAAGACCTCATGATGG CGAGACTGGCCGATGCTCCCGGCGGCCCCCCGGCCCGAAACGCGGGCATG ATGGCGAGGCTGGCAGAAGAAGGTCCCGCCGGCGGCGGGGGGCCCGCGCA AGGGAAATCCAGGCAGGCACCACCCACCCGGAACCCGCCCCCGAGACACA GGATCGTTCTCTCCGCCGGCGAGGCGAGCAGCGAGGCCATGGTGTTAGTC TCGGTCGTCGCCGAGGAGAAAGCGCGAGACGATGGCGGCAATGATGAGAC GGAGACGGAGGAAGGACTGCGACGGCGGTGCCTGGGCAGGGTGGAGGCGG CGGCGGCGTTGGGTTTCGAGGAACTCAGGAGGCGGCACGTCGAAGACGTG GAGGGGCTGTTCGACCGTGTTCACTTCTCGCTCGGCCCCAGCGGTGGTAG CACCGCTGACGGTGGTGCTGGTGGCGGGAAGAGAAGATTTAACGGTGGAG TGAATGGGATGGGAGGCGGAGAGTCGCTTTCACCTGATAGGTCTTGCGTC GCTGGGCTGCCTATCAGAACCAGGGTTGCGAGGTCGGGGAAGGCGTGTAC GGAGAAAGGAGGGGAGGGCGCGGGTGTCACGGGACAGGGGGCGGATAATG GAGGGGGGGGAGGGCTGCCCGAGCGAACGGTTGTGGATGACGGTCTGGTC GAGCTCATGTACCACTACGGCAGG back to top
|