mRNA_E_fasciculatus_S2_contig7806.15972.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: Leucine (rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI) HSP 1 Score: 226 bits (576), Expect = 4.440e-65 Identity = 122/158 (77.22%), Postives = 131/158 (82.91%), Query Frame = 3
Query: 138 IPPQ-VQHITHGLGKPGDNDISLSEPRPVESDARREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAKIGDFGTSRWAQATEKPTGLA 608
IP + V T LGK G + L++ + A+ KAERKAFLRELDAM+RLRNPHTVNVYGAITSLPD LVLVMELL GGDLRAMLKNSE LPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSA+V LDGRGRAKIGDFGTSRWAQ TE+ TGLA
Sbjct: 833 IPEEHVSITTEVLGKGGFGVVYLADYNGHNAAAK--KAERKAFLRELDAMVRLRNPHTVNVYGAITSLPDRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLA 988
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: Similar (to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.560e-62 Identity = 119/158 (75.32%), Postives = 129/158 (81.65%), Query Frame = 3
Query: 138 IPPQVQHITHG-LGKPGDNDISLSEPRPVESDARREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAKIGDFGTSRWAQATEKPTGLA 608
IP IT+ LGK G + L++ + A+ KAERKAFLREL+AMIRLRNPHTVNVYGAITS P+ LVLVMELL GGDLRAMLKNSE LPEDKCRQII DVCAGMAFLHSKATVHGDLKSA+V LDGRGRAKIGDFGTSRWAQ TE+ TGLA
Sbjct: 671 IPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK--KAERKAFLRELEAMIRLRNPHTVNVYGAITSQPNRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIHDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLA 826
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: TKL (family protein kinase protein kinase/ putative CTR1-like protein kinase/ leucine rich repeat pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ2_ECTSI) HSP 1 Score: 216 bits (550), Expect = 1.880e-61 Identity = 117/158 (74.05%), Postives = 129/158 (81.65%), Query Frame = 3
Query: 138 IPPQVQHITHG-LGKPGDNDISLSEPRPVESDARREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAKIGDFGTSRWAQATEKPTGLA 608
IP IT+ LGK G + L++ + A+ KAERKAFLRELDAMIRLR+PHTVNVYGAITSLPD LV+VMELL GGDLRAMLKNSE LPED CRQIIQDVCAGM FLHSK+TVHGDLKSA+V LDGRGRAKIGDFGTSRWAQ T++ TGLA
Sbjct: 889 IPEDHVSITNEMLGKGGFGVVYLADYNGHNAAAK--KAERKAFLRELDAMIRLRSPHTVNVYGAITSLPDGLVMVMELLAGGDLRAMLKNSEQPLPEDMCRQIIQDVCAGMTFLHSKSTVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTDRSTGLA 1044
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE) HSP 1 Score: 213 bits (543), Expect = 1.280e-60 Identity = 111/160 (69.38%), Postives = 129/160 (80.62%), Query Frame = 3
Query: 147 QVQHITHGLGKPGDNDISLSEPRPVESDARREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAK------IGDFGTSRWAQATEKPTGLA 608
+VQ+I HG G+ D L+ P+ + DA REK +RKAFLRELDAMIRLR+PHTVNVYGAITSLPD L+LV+ELL GGDLR MLKNSE LPE++ RQII+D+CAGMAFLHSK+TVHGDLKSA++ LD RGRAK IGDFGTSRW Q TE+ TGLA
Sbjct: 782 KVQYIIHGFGR---RDDVLNGPKSGQPDAVREKVQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKARWACGIGDFGTSRWTQNTERSTGLA 938
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE) HSP 1 Score: 205 bits (521), Expect = 1.670e-57 Identity = 106/154 (68.83%), Postives = 122/154 (79.22%), Query Frame = 3
Query: 147 QVQHITHGLGKPGDNDISLSEPRPVESDARREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAKIGDFGTSRWAQATEKPTGLA 608
+V HI H LGKPG + L +S+ REK++RKAFLREL+AMIRLR+PHTV VYGAITS PD LVLVMELL GGDLR +LKNS+ LPE++CR+II D+CAGM FLHSK TVHGDLKSA+V LDG GRAKIGDFGTSRW+ T TGLA
Sbjct: 947 KVLHIAHDLGKPGGQEDLLEARVDGQSNPEREKSQRKAFLRELEAMIRLRSPHTVGVYGAITSRPDRLVLVMELLAGGDLRRLLKNSDQPLPEEQCRRIIGDICAGMHFLHSKETVHGDLKSANVLLDGAGRAKIGDFGTSRWSYHTNS-TGLA 1099
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: Putative (CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.940e-56 Identity = 103/147 (70.07%), Postives = 123/147 (83.67%), Query Frame = 3
Query: 171 LGKPGDNDISLSEPRPVESDAR-REKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAKIGDFGTSRWAQATEKPTGLA 608
LG+ G ++ L++ + A+ +K +RKAFLRELDAMIRLR+PHTVNVYGAITSLPD L+LV+ELL GGDLR MLKNSE LPE++ RQII+D+CAGMAFLHSK+TVHGDLKSA++ LD RGRAKIGDFGTSRW Q TE+ TGLA
Sbjct: 904 LGRGGFGEVYLADYNGHNAAAKVGKKIQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLA 1050
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X9_ECTSI) HSP 1 Score: 201 bits (510), Expect = 5.260e-56 Identity = 108/149 (72.48%), Postives = 119/149 (79.87%), Query Frame = 3
Query: 138 IPPQVQHITHG-LGKPGDNDISLSEPRPVESDARREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAKIGDFGTSRWAQ 581
IP IT LGK G + L++ + A+ KAERKAFLRELDAMIRLR+PH VN+YGAITSLPD L+LVMELL GGDLRAMLKNSE LP+DKCRQIIQDVC GMAFLH KATVHGDLKSA+V LD RGRAKIGDFGTSRWA+
Sbjct: 1116 IPEDHVSITDEMLGKGGFGVVYLADYNGHNAAAK--KAERKAFLRELDAMIRLRSPHIVNIYGAITSLPDRLILVMELLAGGDLRAMLKNSEQPLPKDKCRQIIQDVCVGMAFLHGKATVHGDLKSANVLLDDRGRAKIGDFGTSRWAE 1262
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: Transmembrane (receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI) HSP 1 Score: 191 bits (486), Expect = 5.990e-53 Identity = 100/154 (64.94%), Postives = 120/154 (77.92%), Query Frame = 3
Query: 147 QVQHITHGLGKPGDNDISLSEPRPVESDARREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAKIGDFGTSRWAQATEKPTGLA 608
+V I LG +ND S + +RE ++R+AFLRELDAMIRLR+PHTVNVYGA+TSLPD +VLVMELL+GGDLR +L+N + LPE++ R+II D+CAGMAFLHSK TVHGDLKSA+V LDG GRAKIGDFGTSRW+Q T TGLA
Sbjct: 688 KVLLIARDLGTLSENDALESPLAGRSNTTKREDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSLPDRMVLVMELLSGGDLRTLLRNYQQPLPEEQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTNS-TGLA 840
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU2_ECTSI) HSP 1 Score: 179 bits (455), Expect = 1.270e-51 Identity = 94/154 (61.04%), Postives = 115/154 (74.68%), Query Frame = 3
Query: 147 QVQHITHGLGKPGDNDISLSEPRPVESDARREKAERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAKIGDFGTSRWAQATEKPTGLA 608
+V H+ H G + S +RE+ +R+AFLREL+AMIRL++PHTVNVYGA+T LPD L+LVMELL+GGDLR +L + + PE++ R+II DVC+GMAFLHSK TVHGDLKSA+V LDG GRAKIGDFGTSRWAQ T TGLA
Sbjct: 125 KVVHVAHDQGALREIYELGQSVASSHSKTQREQNQRRAFLRELEAMIRLQSPHTVNVYGAVTCLPDRLILVMELLSGGDLRTLLSSCDQPFPEEQSRRIIGDVCSGMAFLHSKDTVHGDLKSANVLLDGAGRAKIGDFGTSRWAQHTNS-TGLA 277
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 186 bits (471), Expect = 8.520e-51 Identity = 96/148 (64.86%), Postives = 119/148 (80.41%), Query Frame = 3
Query: 171 LGKPGDNDISLSEPRPVESDARREK--AERKAFLRELDAMIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSASVFLDGRGRAKIGDFGTSRWAQATEKPTGLA 608
LGK G ++ L++ + A+ + ++R+AFLRELDAMIRLR+PHTVNVYGA+TS PDH+VLVMELL+GGDLR +L+ SE LP+++ R+II D+CAGMAFLH K TVHGDLKSA+V LDG GRAKIGDFGTSRW+Q T TGLA
Sbjct: 833 LGKGGFGEVYLADYNGRNAAAKHHQNDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSQPDHMVLVMELLSGGDLRTLLRTSEQPLPQEQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTHS-TGLA 979 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7806.15972.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7806.15972.1 >prot_E_fasciculatus_S2_contig7806.15972.1 ID=prot_E_fasciculatus_S2_contig7806.15972.1|Name=mRNA_E_fasciculatus_S2_contig7806.15972.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=109bp MIRLRNPHTVNVYGAITSLPDHLVLVMELLTGGDLRAMLKNSEHALPEDKback to top mRNA from alignment at E_fasciculatus_S2_contig7806:2159..5390- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7806.15972.1 ID=mRNA_E_fasciculatus_S2_contig7806.15972.1|Name=mRNA_E_fasciculatus_S2_contig7806.15972.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3232bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7806:2159..5390- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7806:2159..5390- >mRNA_E_fasciculatus_S2_contig7806.15972.1 ID=mRNA_E_fasciculatus_S2_contig7806.15972.1|Name=mRNA_E_fasciculatus_S2_contig7806.15972.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=327bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7806:2159..5390- (Ectocarpus fasciculatus EfasUO2)back to top |