mRNA_E_fasciculatus_S2_contig7788.15955.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ86_ECTSI) HSP 1 Score: 253 bits (646), Expect = 9.240e-83 Identity = 121/130 (93.08%), Postives = 128/130 (98.46%), Query Frame = 1
Query: 1 QISCELGDPYEVPEQTPIVWYLALRAADAFKSKNGRYPGEEDDQVDGDAAEVWKLTKELLGGMGVETEHLSEKHAQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGVIGRYEL 390
+ISCELGDPYEVPEQTPIVWYLALRAAD+FK+KNGRYPGEEDDQVDGDAA +WK+TKELLGGMGVETEHLSEKHAQEIARYGASELHNVASV+GGIGSQEAVKAIT QYTPLDNT+VYNGLAGVIGRYEL
Sbjct: 165 EISCELGDPYEVPEQTPIVWYLALRAADSFKTKNGRYPGEEDDQVDGDAAALWKITKELLGGMGVETEHLSEKHAQEIARYGASELHNVASVVGGIGSQEAVKAITRQYTPLDNTLVYNGLAGVIGRYEL 294
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: NEDD8-activating (enzyme E1 regulatory subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD4_9PHAE) HSP 1 Score: 252 bits (644), Expect = 1.410e-79 Identity = 121/130 (93.08%), Postives = 127/130 (97.69%), Query Frame = 1
Query: 1 QISCELGDPYEVPEQTPIVWYLALRAADAFKSKNGRYPGEEDDQVDGDAAEVWKLTKELLGGMGVETEHLSEKHAQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGVIGRYEL 390
+ISCELGDPYEVPEQTPIVWYLALRAADAFK+KNGRYPGEEDDQVDGDAA +WK+TKELL GMGVETEHLSEKHAQEIARYGASELHNVASV+GGIGSQEAVKAIT QYTPLDNT+VYNGLAGVIGRYEL
Sbjct: 399 EISCELGDPYEVPEQTPIVWYLALRAADAFKTKNGRYPGEEDDQVDGDAAALWKITKELLAGMGVETEHLSEKHAQEIARYGASELHNVASVLGGIGSQEAVKAITRQYTPLDNTLVYNGLAGVIGRYEL 528
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: NEDD8-activating (enzyme E1 regulatory subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1H4_HETAK) HSP 1 Score: 137 bits (346), Expect = 1.120e-35 Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 4 ISCELGDPYEVPEQTPIVWYLALRAADAFKSKNGRYPGEEDDQVDGDAAEVWKLTKELLGGMGVETEHLSEKHAQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGVIGRYEL 390
++ + D E Q P++WY+ LR D F KNG YPG ++D + D +W + L+ G E LS+KHA E+ RYG +ELHN+A+V+GGI SQEAVK ITHQ+TPL NT++YNG+AG+ G YEL
Sbjct: 413 VAMAMMDLPEDAAQCPLLWYIGLRGVDQFFEKNGHYPGTQEDLLLPDGMSLWNEMQTLVKGWETEVPPLSKKHATEMTRYGGAELHNIAAVIGGIASQEAVKIITHQFTPLKNTLIYNGIAGISGVYEL 541
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E762_TRICV) HSP 1 Score: 131 bits (329), Expect = 2.030e-33 Identity = 65/132 (49.24%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 22 DPYEVPEQTPIVWYLALRAADAFKSKNGRYPGEED--DQVDGDAAEVWKLTKELLGGMGVETEHL--------SEKHAQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGVIGRYE 387
DPYEVPE TP++W++ALRA D F+ +GRYPG + +D DA EV + + MG+ L KHA+E+ RY +E+HNVA+V+GG+ SQEAVK IT QY PLD+T VYNG+AG+ G Y
Sbjct: 372 DPYEVPEHTPLLWHVALRACDVFRRNHGRYPGSDGRTTALDSDATEVQGIIGRVAKSMGLADTDLIKSTLLSGERKHAREVVRYNNAEIHNVAAVVGGVASQEAVKLITGQYVPLDDTYVYNGIAGIAGVYR 503
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: NEDD8-activating (enzyme E1 regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIV0_9STRA) HSP 1 Score: 130 bits (326), Expect = 7.230e-33 Identity = 66/115 (57.39%), Postives = 81/115 (70.43%), Query Frame = 1
Query: 46 TPIVWYLALRAADAFKSKNGRYPGEEDDQVDGDAAEVWKLTKELLGGMGVETEHLSEKHAQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGVIGRYEL 390
TPI WYLALRAAD F++K GR+PGE + D VW + L+ +GV L HA+E+ R GASE+H VASV+GGI SQEAVK +T QY PLDNT VYNG+AGV+G Y+L
Sbjct: 420 TPICWYLALRAADRFQAKRGRWPGETAATIALDNQAVWAELQALVKELGVGKGPLGLAHAREVVRAGASEVHCVASVVGGIASQEAVKVVTRQYAPLDNTAVYNGVAGVLGVYKL 534
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6W5_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.090e-32 Identity = 58/124 (46.77%), Postives = 83/124 (66.94%), Query Frame = 1
Query: 16 LGDPYEVPEQTPIVWYLALRAADAFKSKNGRYPGEEDDQVDGDAAEVWKLTKELLGGMGVETEHLSEKHAQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGVIGRYE 387
+ DPYE PE TP++W++ALRA D ++ +G YPGE+ + ++ A EV + L+ MG+ + HA E+ RY +++HNVAS++GG+ SQEAVK IT QY PL+NT VYNG+AG Y
Sbjct: 59 IDDPYEQPEHTPLLWHIALRACDVYRDVHGAYPGEDLESLESQATEVHQSMLGLVQKMGLTMTVDLKPHAAEMVRYHNAQVHNVASIIGGVASQEAVKLITCQYIPLNNTHVYNGIAGTAAVYR 182
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: NEDD8-activating (enzyme E1 regulatory subunit n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JM46_9DINO) HSP 1 Score: 118 bits (296), Expect = 1.360e-28 Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 37 PEQTPIVWYLALRAADAFKSKNGRYPGEEDDQVDGDAAEVWKLTKELLGGMGVETEH--------------LSEKHAQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGV 372
PE P+ WY+ +RAADAF K+GR+PG+ D + DA E+ L + G MG+ EH L+ HAQE+ARYG ELH V+ ++GG+ SQEAVK +THQ+ P+DNT ++NG+A V
Sbjct: 425 PEHAPLKWYIMMRAADAFFEKHGRWPGDTDATLSQDAEELLTLGQAEAGIMGLPAEHVWTDAEYESSTVPLLTPAHAQEMARYGGCELHTVSGIVGGLASQEAVKLLTHQFVPVDNTFIFNGIASV 550
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: Hypothetical (protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSY4_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.920e-28 Identity = 63/134 (47.01%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 22 DPYEVPEQTPIVWYLALRAADAFKSKNGRYPGEEDD-QVD--------GDAAEVWKLTKELLGGMGVETEHLSE---KHAQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGVIGRYE 387
DPYE PE TP +WYL RA + F +KN RYPG DD + D + AE +K++ L V T L + K A E RY +E+HN+ASV+GG+ SQEAVK IT QY PLDNT ++NG+ V G Y
Sbjct: 99 DPYEAPEHTPFLWYLGFRACNVFFAKNQRYPGTTDDWKADIPKLQDCIAEVAEHYKMSDNDL----VSTTLLKDAEMKMAHEFTRYANAEIHNIASVVGGVASQEAVKLITGQYVPLDNTYIFNGIVSVGGVYR 228
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C431_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.110e-27 Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 31 EVPEQTPIVWYLALRAADAFKSKNGRYPGEEDDQVDGDAAEVWK-------LTKELLGGMGVETEHLSEKHAQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGVIGRYE 387
+V Q P WY+ALRAAD F + GR G D++V+ DAA + + +GG+ + + HA EIARYG +E HNVA+V+GG+ SQEAVK ITHQY PLDNT ++NG+ G Y
Sbjct: 167 KVAAQKPFCWYVALRAADRFTGRTGRVAGAADEEVEADAAALAEDVAAEKAAAAASMGGLDIP---VGADHAAEIARYGGAEPHNVAAVLGGVASQEAVKLITHQYEPLDNTFIFNGITGESAVYR 289
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Match: ThiF (domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZDT3_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.170e-27 Identity = 66/138 (47.83%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 16 LGDPYEVPEQTPIVWYLALRAADAFKSKNGRYPGEED-------DQVDGDAAEVWKLTKELLG---GMGVETEHLSEKH----AQEIARYGASELHNVASVMGGIGSQEAVKAITHQYTPLDNTVVYNGLAGVIGRYE 387
L DP EVP TP++WYL +RAA AF + GRYPG D Q++ DA+ + +L +E + G+G E S +H A+E+ARYG +E+H VASV+GG+ +QEAVK +T QY PLDNT VYNG+ V G Y
Sbjct: 483 LMDPCEVPVHTPLLWYLGVRAAQAFCQREGRYPGCVDVCGTAGTGQLEEDASLLEELLRETIFPRYGLGGEDLLSSREHTERIARELARYGNAEVHAVASVVGGVAAQEAVKVVTGQYVPLDNTYVYNGIVSVGGVYR 620 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7788.15955.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7788.15955.1 >prot_E_fasciculatus_S2_contig7788.15955.1 ID=prot_E_fasciculatus_S2_contig7788.15955.1|Name=mRNA_E_fasciculatus_S2_contig7788.15955.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=131bp QISCELGDPYEVPEQTPIVWYLALRAADAFKSKNGRYPGEEDDQVDGDAAback to top mRNA from alignment at E_fasciculatus_S2_contig7788:3969..6994- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7788.15955.1 ID=mRNA_E_fasciculatus_S2_contig7788.15955.1|Name=mRNA_E_fasciculatus_S2_contig7788.15955.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3026bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7788:3969..6994- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7788:3969..6994- >mRNA_E_fasciculatus_S2_contig7788.15955.1 ID=mRNA_E_fasciculatus_S2_contig7788.15955.1|Name=mRNA_E_fasciculatus_S2_contig7788.15955.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=393bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7788:3969..6994- (Ectocarpus fasciculatus EfasUO2)back to top |