mRNA_E_fasciculatus_S2_contig7775.15939.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5K3_ECTSI) HSP 1 Score: 255 bits (651), Expect = 3.890e-84 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEVR 375
MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEVR
Sbjct: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEVR 125
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHT2_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.810e-47 Identity = 78/123 (63.41%), Postives = 96/123 (78.05%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDE 369
MRLLTHNVLR +KGV EGYPL IEA++VQM ES + +FVKH+A TL+W AL +A +VG+PE LP A++ LL D +FL ALHRVLMD+HVV G LVCPE+GRRFPIA G+P++M E E
Sbjct: 1 MRLLTHNVLRCAIKGVEEGYPLSIEASEVQMEESPFRPDFVKHIAPTLNWPALRQAVKQVGLPEDMLPEAVSDALLGDEAFLRALHRVLMDVHVVAGALVCPESGRRFPIAHGIPDMMIAEGE 123
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: Uncharacterized (protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INK2_KLENI) HSP 1 Score: 137 bits (344), Expect = 1.250e-37 Identity = 64/124 (51.61%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEV 372
MRLLTHN+L +KGV +GYPL+IEAT + E++ F++H+ LDW AL +AAA +G+ E LP + P LED FL H VL+++H+ EG LVCPETGRRFP+++G+PN++ EDEV
Sbjct: 1 MRLLTHNMLACNIKGVTKGYPLKIEATKTEEKETDFNAGFLRHIYPKLDWKALREAAASLGLEE--LPEQVEPSQLEDEDFLRRFHHVLLEIHLEEGALVCPETGRRFPVSKGIPNMLLNEDEV 122
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: TRM112-like (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC2_9STRA) HSP 1 Score: 137 bits (345), Expect = 4.200e-37 Identity = 65/124 (52.42%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEV 372
MRL+THN+L+S +KGV+ G+PLRIEA V++ E+E EFV+++ +DW AL A+ E+GM E LP + D SFL+ +H++L+D+HV+EG+LVCPETGRRFPI G+PN++ EDEV
Sbjct: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDE--LPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEV 173
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: Multifunctional (methyltransferase subunit TRM112 At1g22270 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VL84_9CHLO) HSP 1 Score: 132 bits (333), Expect = 5.650e-36 Identity = 60/123 (48.78%), Postives = 91/123 (73.98%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDE 369
M+LLTHN+L +KGV G+P +IEA V++ E++ + +F++H+ + W ALC+AAA +G+ EG LP T E+LED +F++ H L+++H+ EG LVCPETGR+FP++ G+PNL+ TEDE
Sbjct: 1 MKLLTHNMLACHIKGVQNGFPFKIEAEKVEVQEADFEPDFLQHIFPRIQWAALCEAAAAMGV-EG-LPAEATEEMLEDDAFMKKFHHALLEVHLQEGALVCPETGRKFPVSAGIPNLLLTEDE 121
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: Multifunctional (methyltransferase subunit TRM112-like protein n=2 Tax=Scleractinia TaxID=6125 RepID=A0A3M6TTY8_POCDA) HSP 1 Score: 130 bits (328), Expect = 3.290e-35 Identity = 63/124 (50.81%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEV 372
MRLLTHN+L S +KGV GYPL IE +V + E + EF+ M +DWGAL +AA +VG G LP L P+ +D FL+ H VL+++ V EG+LVCPE+GR+FPI G+PN++ EDEV
Sbjct: 1 MRLLTHNMLTSHVKGVKNGYPLAIEVVNVVVNEVDFNPEFISRMIPKVDWGALVQAAQQVGR-SGGLPDELIPDYEKDEEFLKKAHHVLLEVEVQEGSLVCPESGRKFPIKNGIPNMLLNEDEV 123
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: Multifunctional (methyltransferase subunit TRM112-like protein n=7 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6J2QHW1_COTGO) HSP 1 Score: 130 bits (328), Expect = 3.290e-35 Identity = 62/124 (50.00%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEV 372
M+LLTHN+L S +KGVV+GYPL I+AT+V++ E + +FV M L+W AL +AA E+G + LP L PE + FL+ +HRVL+++ V+EG L CPE+GR FPI+ G+PN++ +EDEV
Sbjct: 1 MKLLTHNLLTSHVKGVVKGYPLLIKATEVKVNEVDFNPQFVSRMIPKLEWSALVQAAEELGQRQ-DLPAELVPEYENNEEFLKKVHRVLLEVEVIEGCLRCPESGREFPISRGIPNMLLSEDEV 123
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: multifunctional (methyltransferase subunit TRM112-like protein n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF2BFAF) HSP 1 Score: 130 bits (328), Expect = 3.290e-35 Identity = 62/124 (50.00%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEV 372
MRLLTHN+L+S +KGV GYPL IE ++V + E + EF+ M ++W AL +AA +VG EG LP + P+ D FL+ +H VL+++ V EG+LVCPETGR+FPI G+PN++ EDEV
Sbjct: 1 MRLLTHNMLKSHVKGVKNGYPLAIEVSNVVVNEVDFNPEFISRMIPKVEWAALLQAAEQVGRSEG-LPAEVIPDYENDQEFLKKVHHVLLEVQVEEGSLVCPETGRKFPIKNGIPNMLLNEDEV 123
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LY57_CHABU) HSP 1 Score: 130 bits (326), Expect = 6.380e-35 Identity = 60/124 (48.39%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEV 372
MRLLTHN+L +KGV +GYPL+IEA ++ E+E +F++ + LDW AL + A + + E LP P +LED +FL+ LH VL+++++ EG LVCPETGRRFP+++G+PN++ EDEV
Sbjct: 1 MRLLTHNMLTCNVKGVTKGYPLKIEAVRLEKKEAEFNPDFLRRIFPKLDWKALYETALSLDLDE--LPEQAEPSMLEDEAFLQKLHHVLLEVNLEEGALVCPETGRRFPVSKGIPNMLLNEDEV 122
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Match: Predicted (protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9D3_PHYPA) HSP 1 Score: 129 bits (325), Expect = 9.020e-35 Identity = 59/124 (47.58%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEV 372
MRLLTHN+L +KGV +G+PL IE T ++ ESE+ +F++H+ LDW A +AA VG+ ++P + P +L+D FL H L+++H+ EG L+CPETGRRFP+ +GVPN++ EDEV
Sbjct: 1 MRLLTHNMLACNIKGVTKGFPLGIEHTRLETKESELNADFLRHIFPKLDWKAFHEAAQSVGV--NNIPDQVEPVMLDDDEFLRKFHHALLEVHLEEGALICPETGRRFPVTKGVPNMLLNEDEV 122 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7775.15939.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7775.15939.1 >prot_E_fasciculatus_S2_contig7775.15939.1 ID=prot_E_fasciculatus_S2_contig7775.15939.1|Name=mRNA_E_fasciculatus_S2_contig7775.15939.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=126bp MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWback to top mRNA from alignment at E_fasciculatus_S2_contig7775:301..4381- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7775.15939.1 ID=mRNA_E_fasciculatus_S2_contig7775.15939.1|Name=mRNA_E_fasciculatus_S2_contig7775.15939.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4081bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7775:301..4381- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7775:301..4381- >mRNA_E_fasciculatus_S2_contig7775.15939.1 ID=mRNA_E_fasciculatus_S2_contig7775.15939.1|Name=mRNA_E_fasciculatus_S2_contig7775.15939.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=378bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7775:301..4381- (Ectocarpus fasciculatus EfasUO2)back to top |