mRNA_E_fasciculatus_S2_contig776.15925.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig776.15925.1
Unique NamemRNA_E_fasciculatus_S2_contig776.15925.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 513 bits (1320), Expect = 4.670e-170
Identity = 242/323 (74.92%), Postives = 272/323 (84.21%), Query Frame = 1 
Query: 1378 CEADQVCCDDRRVCVDRDDEFLYNPTACGDPHMFGFFGQKFDFTGEDGAWYSLIADDNMHINMRVTSPVPDLPEITYITGLSILATDEHGIHHTMVIEVREPHNLDSSCPHGLSPCLADGSLSVFLDGEEKLLAPGTVFLAQDVQVSAVNLPGACRSFGFEKYWERKRLENARHGRRLSTTVGMGEWILGDPTATNMDECVEYVARAQAEEGGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDAKGILGETFIPTRDANGKPIMAGMEAIRGQQEHYRVDGALGMDFVQNGH 2346
            C    +CC+ +  C    DE + +   CGDPHM GF GQKFDFTGEDG WYS+IAD NM++NMRVTSPV DLPEITYITGLS+L TD  G+ H++VIEV +PHNLDSSCP G+SPCL DG+L V LDG E L APGTV L  DV+VSA NLPGACRSFGFEKYWERK+LENAR GR L TT  MGEWILGDPTATNM+ECVEYVARA+AEEGGVF HQSEH SFQIVTPKATVRLSHGRLHQIAMRDPTD++DLPDHLTWQMNMA+ H +VSH AKGILG+TF+PTRDA+GKPIM G+EAIRG +E YRVDGALG+DFVQ+ H
Sbjct:  291 CPDGLICCEKKDYCDVFGDESV-DGVICGDPHMTGFLGQKFDFTGEDGGWYSVIADSNMNVNMRVTSPVADLPEITYITGLSVLTTDTDGLEHSIVIEVIDPHNLDSSCPAGVSPCLGDGALVVLLDGVESLFAPGTVALGADVEVSAANLPGACRSFGFEKYWERKKLENARAGRLLRTTPSMGEWILGDPTATNMNECVEYVARAEAEEGGVFAHQSEHVSFQIVTPKATVRLSHGRLHQIAMRDPTDRFDLPDHLTWQMNMAIHHEDVSHAAKGILGQTFVPTRDADGKPIMTGLEAIRGSEEDYRVDGALGVDFVQDAH 612
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 2.440e-148
Identity = 216/319 (67.71%), Postives = 255/319 (79.94%), Query Frame = 1 
Query: 1378 CEADQVCCDDRRVCVDRDDEFLYNPTACGDPHMFGFFGQKFDFTGEDGAWYSLIAD-DNMHINMRVTSPVPDLPEITYITGLSILATDEHGIHHTMVIEVREPHNLDSSCPHGLSPCLADGSLSVFLDGEEKLLAPGTVFLAQDVQVSAVNLPGACRSFGFEKYWERKRLENARHGRRLSTTVGMGEWILGDPTATNMDECVEYVARAQAEEGGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDAKGILGETFIPTRDANGKPIMAGMEAIRGQQEHYRVDGALGMDF 2331
            C+    CCD+    V +D      P ACGDPHM GF GQKFDFTGEDG +Y+LI+D  NMH+NMRVTSPVP LPEITYITGLS+L TD +G  H++VIEV+ PH+++S+CP G+SPCLADGSL V L+G+E+L APG+V LA  V V+AVNLPG CRSFGFE YWERK+LENARHGR L     MG+W+LGDPTATNMDEC+EYVA+A+ + GG+F  QSEHASFQIVTP ATVRLSHGRLHQIA RDPT+++DLPDH TWQMNM +DHNEVS+ A GILGET  PT+DA G+ IM GMEAIRG +E YRV G L + F
Sbjct:   61 CKTGLKCCDETDPKVCKDPTETSGPRACGDPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVPSLPEITYITGLSLLTTDANGEVHSIVIEVKNPHDIESACPAGVSPCLADGSLRVMLNGKEELSAPGSVALADGVIVTAVNLPGECRSFGFEHYWERKKLENARHGRHLGEQ-SMGDWLLGDPTATNMDECMEYVAQAEGQAGGLFALQSEHASFQIVTPTATVRLSHGRLHQIATRDPTNRFDLPDHTTWQMNMGIDHNEVSYSATGILGETSTPTKDAYGQDIMTGMEAIRGSEEDYRVAGPLDVTF 378
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 434 bits (1117), Expect = 1.030e-143
Identity = 213/301 (70.76%), Postives = 240/301 (79.73%), Query Frame = 1 
Query: 1462 GDPHMFGFFGQKFDFTGEDGAWYSLIADDNMHINMRVTSPVPDLPEI-------TYITG-----LSILATDEHGIHHTMVIEVREPHNLDSSCPHGLSPCLADGSLSVFLDGEEKLLAPGTVFLAQDVQVSAVNLPGACRSFGFEKYWERKRLENARHGRRLSTTVGMGEWILGDPTATNMDECVEYVARAQAEEGGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDAKGILGETFIPTRDANGKPIMAGMEAIRGQQEHYRVDGALGMD 2328
            G PHM GF GQKFDFTGEDG WYS+IAD NM++NMRVTSP    P          Y +      LS+L TD  G  H++VIEV EPH+LDSSCP G+SPCLADG+L V LDG+E L A GTV L   V++SAVNLPGACRSFGFEKYWE K+LE A  GR+L T   MGEWILGDPTATNMDECVEYVARA+AEEGG+F HQSEHASFQIVTP ATVRLSHGRLHQIAMRDPTD+YDLPDHLTWQMN+AVDHN+VS+ AKGILGETF+PTRDA+GKPIM GMEAIRG +E  +  G + M+
Sbjct:    9 GGPHMTGFLGQKFDFTGEDGGWYSIIADSNMNVNMRVTSPSSTCPRSPTSQRLGAYSSAVLERRLSVLTTDADGSDHSIVIEVAEPHSLDSSCPAGVSPCLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYWEHKKLEYATGGRQLRTQPSMGEWILGDPTATNMDECVEYVARAEAEEGGMFAHQSEHASFQIVTPAATVRLSHGRLHQIAMRDPTDQYDLPDHLTWQMNLAVDHNQVSYAAKGILGETFVPTRDASGKPIMTGMEAIRGTEEDCKCGGNVMMN 309
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: LNR (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 427 bits (1099), Expect = 8.080e-132
Identity = 222/368 (60.33%), Postives = 261/368 (70.92%), Query Frame = 1 
Query: 1243 GTECGCDFGDFANPCSEQELQCTPGPVGYTCAVSAACDPNNDNRDCEADQVCCDDRRVCVDRDDEFLYNPTACGDPHMFGFFGQKFDFTGEDGAWYSLIAD-DNMHINMRVTSPVPDLPEITYITGLSILATDEHGIHHTMVIEVREPHNLDSSCPHGLSPCLADGSLSVFLDGEEKLLAPGTVFLAQDVQVSAVNLPGACRSFGFEKYWERKRLENARHG-RRLSTTVGMGEWILGDPTATNMDECVEYVAR--AQAEEGGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDAKGILGETFIPTRDANGKPIMAGMEAIRGQQEHYRVDGALGMDFV 2334
            G+  G D  D A+ C E+   C                   D+ DC   + CC  + VC   D     +PTACGDPHM GF GQKFDFTG DG WY LI+D  +MH+NMRVTSPV   P+ITYITGLS++ TD  G  H+++I V++P++LDS C  G+SPCLADGSL V LDG E LLAPG V LA DV VSAVN+PGACRSFGFEKYWERK+LE A+ G RRLS    MGEWILGDPTATNM EC EYVAR  A  E+G +FTHQSEHASFQIVTP A +RLSHGRLHQIA      ++ LPDH+TWQMN+AVDHN+VS +AKG+LGET +PTR  +G+ IM GMEAIRG QE Y V+G LG+DF 
Sbjct:  728 GSGTGFDCLDSASDCVEEPTAC------------------EDDSDCTLPEECCLLKLVCEVADPT---DPTACGDPHMTGFHGQKFDFTGNDGQWYCLISDLPSMHLNMRVTSPVSSRPDITYITGLSLITTDGDGQEHSIIISVKDPYSLDSDCSPGVSPCLADGSLIVVLDGNETLLAPGAVELASDVMVSAVNIPGACRSFGFEKYWERKKLEYAQAGGRRLSVQQSMGEWILGDPTATNMAECTEYVARHIAGGEDGDLFTHQSEHASFQIVTPAAIIRLSHGRLHQIA------QFGLPDHMTWQMNLAVDHNDVSLNAKGVLGETMVPTRTVSGEYIMHGMEAIRGTQEDYHVEGPLGLDFT 1068
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 1.300e-126
Identity = 212/353 (60.06%), Postives = 250/353 (70.82%), Query Frame = 1 
Query: 1285 CSEQELQCTPGPVGYTCAVSAACDPNNDNRDCEADQVCCDDRRVCVDRDDEFLYNPTACGDPHMFGFFGQKFDFTGEDGAWYSLIAD-DNMHINMRVTSPVPDLPEITYITGLSILATDEHGIHHTMVIEVREPHNLDSSCPHGLSPCLADGSLSVFLDGEEKLLAPGTVFLAQDVQVSAVNLPGACRSFGFEKYWERKRLENARHGRR-LSTTVGMGEWILGDPTATNMDECVEYVAR--AQAEEGGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDAKGILGETFIPTRDANGKPIMAGMEAIRGQQEHYRVDGALGMDF 2331
            C +    C   P G             D+ DC   + C   + VC   +   L +PTA GDPHM GF GQKFDFTG DG WY LI+D  +MH+NMRVT+PV   P+ITYITGLS++ TD  G  H+++I V++PHNLDS CP G+SPCLADGSL V LDG E L APG V LA DV+VSAVN+PGACRSFGFEKYWERK+LE A+ G R L T   MGEWILGDPTATN++EC EYVAR  A + +G +F HQSEH SFQIVTP A VRLSHGR HQIA      +  LPDH+TWQMN+AVDHN+VS  AKG+LGET IPTR A+G+ +M GMEAIRG +E Y VDG LG+ F
Sbjct:  553 CLDPASDCVKEPTGCV-----------DDGDCTLPEECTLVKLVC---EVPILTDPTAGGDPHMTGFHGQKFDFTGNDGQWYCLISDLPSMHLNMRVTAPVSSRPDITYITGLSLITTDGGGQEHSIIISVKDPHNLDSDCPPGVSPCLADGSLIVVLDGNETLFAPGAVELAPDVKVSAVNIPGACRSFGFEKYWERKKLEYAQAGGRGLLTEQSMGEWILGDPTATNVEECTEYVARHVAGSVDGDLFAHQSEHTSFQIVTPTAVVRLSHGRRHQIA------ELGLPDHVTWQMNLAVDHNDVSLSAKGVLGETLIPTRAASGEYVMHGMEAIRGTEEDYHVDGPLGLGF 885
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 3.180e-126
Identity = 194/314 (61.78%), Postives = 246/314 (78.34%), Query Frame = 1 
Query: 1369 NRDCEADQVCCDDRRVCVDRDDEFLYNPTACGDPHMFGFFGQKFDFTGEDGAWYSLIAD-DNMHINMRVTSPVPDLPEITYITGLSILATDEHGIHHTMVIEVREPHNLDSSCPHGLSPCLADGSLSVFLDGEEKLLAPGTVFLAQDVQVSAVNLPGACRSFGFEKYWERKRLENARHG-RRLSTT-VGMGEWILGDPTATNMDECVEYVARAQAE--EGGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDAKGILGETFIPTRDANGKPIMAGMEAIRGQQE 2295
            N DC + ++CC  ++VC   +     +PTACGDPHM GF GQKFDFTG+DG WY LI+D  +M++NMRVT+PVP  P+ITYITG+S++  D +G+ H++VI V++PH+L+SSCP G++PCLA+G+LSV LDG+E L APG V +A +++VS VNLPGACRSFGFEKYWERK+LE A+ G RRLS+    MG+WILGDPTATNM EC EYVAR   E  +GG+F H+SEHASFQIV P ATVRLSHGRLHQIA      +Y LPDH TWQMN+A+D + V   A+G+LGET +PTRDA+G+ +M GME+IRG QE
Sbjct:   28 NTDCTSPEICCPVKKVC---ELPLPTDPTACGDPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVPSRPDITYITGISLITQDGNGLDHSVVITVKDPHSLESSCPAGVTPCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYWERKKLEYAQAGGRRLSSKDQDMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHGRLHQIA------QYGLPDHSTWQMNLAIDSDSVGVGAQGVLGETLVPTRDADGEYVMHGMESIRGTQE 332
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 9.640e-124
Identity = 197/340 (57.94%), Postives = 239/340 (70.29%), Query Frame = 1 
Query: 1351 CDPNNDNRDCEADQ--VCCDDRRVCVDRDDEFLYNPT-----ACGDPHMFGFFGQKFDFTGEDGAWYSLIAD-DNMHINMRVTSPVPDLPEITYITGLSILATDEHGIHHTMVIEVREPHNLDSSCPHGLSPCLADGSLSVFLDGEEKLLAPGTVFLAQDVQVSAVNLPGACRSFGFEKYWERKRLENARHGRRLSTTVGMGE---WILGDPTATNMDECVEYVARAQAE-EGGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDAKGILGETFIPTRDANGKPIMAGMEAIRGQQEHYRVDGALGMDFV 2334
            C     + DC  D+  +CC +  +C        + PT     ACGDPHM GF GQKFDF G+DG WY++++D  ++ +NMRVTSPVP  PEITYITGL I   D  G+ H++VI V +PH+LDS+CP   S CLADG+L+V LDG+  LL+PG   L   V +SAVNLPGACRSFGFEKYWERK+ E    GRRL+  + M E   WILGDPTATNM EC EYV  A  + + G+F + SEH SFQIVTPK T+RLSHGRLHQ+AMRDPTD++D+PDHLTWQMN+A D+ +++ DA GILGET   T DANG PIM GM AIRG QE Y VDG L   FV
Sbjct:  102 CTEATQDTDCPTDEKPICCPETGLCS-------HEPTDDDAGACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITGLGIKTRDIEGLDHSLVITVTDPHSLDSACPVQGSTCLADGALTVELDGDVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYWERKKAEYVASGRRLNNDLQMQEMSDWILGDPTATNMAECTEYVLGATVDGQAGLFEYDSEHTSFQIVTPKGTIRLSHGRLHQLAMRDPTDRFDIPDHLTWQMNLAFDNVDLAVDATGILGETQQHTLDANGNPIMEGMAAIRGSQEDYLVDGPLDNVFV 434
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W0_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 5.060e-93
Identity = 156/279 (55.91%), Postives = 188/279 (67.38%), Query Frame = 1 
Query: 1474 MFGFFGQKFDFTGEDGAWYSLIAD-DNMHINMRVTSPVPDLPEITYITGLSILATDEHGIHHTMVIEVREPHNLDSSCPHGLSPCLADGSLSVFLDGEEKLLAPGTVFLAQDVQVSAVNLPGACRSFGFEKYWERKRLENARHGRRLSTTV---GMGEWILGDPTATNMDECVEYVARAQAEE-GGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDAKGILGETFIPTRDANGKPIMAGMEAIRGQQE 2295
            M GF GQKFDFTG+DG WYS+ +D   +H+NMR  S VP +PEITYITGL I  TD +G+ HT+VI V +PH+LDS+CP G+SPCLADG+L+V LDG+  LLAPG V     V +SAVNLPGACRSFGFE+YWERK+ E AR GRRL ++     M +WILGDPTATNM EC EYV  A     GG+F H  EH SFQI+TP  T+R +                         MN+A+D  +VS +A GILGET  PT DANG PIM GM +IRG Q+
Sbjct:    1 MTGFRGQKFDFTGQDGGWYSVHSDMPRIHLNMRARSLVPSVPEITYITGLGITTTDANGLDHTIVITVTDPHSLDSACPVGVSPCLADGALTVQLDGKHALLAPGEVLFGPQVAISAVNLPGACRSFGFEEYWERKKQEYARGGRRLPSSTQMQAMSDWILGDPTATNMAECTEYVVEATRNGLGGLFEHDLEHTSFQILTPMGTIRRAMAAFTSFPC----------------MNLAIDRIDVSPNATGILGETQKPTLDANGSPIMQGMASIRGAQD 263
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.780e-48
Identity = 118/302 (39.07%), Postives = 167/302 (55.30%), Query Frame = 1 
Query: 1456 ACGDPHMFGFFGQKFDFTGEDGAWYSLIADDNM--HINMRVTSPVPD-LPEITYITGLSILATDEHGIHHTMVIEVREPHNL-DSSCPHGLSPCLADGSLSVFLDGEE--KLLAPGTVFLAQD--VQVSAVNLPGACRSFGFEKYWERKRLENARHGRRLSTTVGMGEWILG-DPTATNMDECVEYVARAQAEEGGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDA-KGILGETFIPTRDANGKPIMAGMEAIRGQQEHYRVDGALGMDF 2331
             CGDPHM G  GQ+ D++G DG WYSLI DDN+  +IN+R+T+P+PD  P+   +T L++L+       H++VIEV  P+ +  + CP G+SPCLA+G L + +D ++  +LL         D  + VS+ NLP  C+ FG ++ W R   +     R L     + EWIL  D        C +Y+A     E  +   QS+HA F+I TP  TVRL+ G  +Q       D   LPD   WQM + +D  +V + A  G+LGET  P  D NG+ +M G +A RG  E YRV  AL + F
Sbjct:  111 VCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKG-----HSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIA-----ENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHF 402
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Match: Imm (upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 5.450e-48
Identity = 116/301 (38.54%), Postives = 165/301 (54.82%), Query Frame = 1 
Query: 1462 GDPHMFGFFGQKFDFTGEDGAWYSLIADDN--MHINMRVTSPVPD-LPEITYITGLSILATDEHGIHHTMVIEVREPHNL-DSSCPHGLSPCLADGSLSVFLDGEE--KLLAPGTVFLAQD--VQVSAVNLPGACRSFGFEKYWERKRLENARHGRRLSTTVGMGEWILG-DPTATNMDECVEYVARAQAEEGGVFTHQSEHASFQIVTPKATVRLSHGRLHQIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDA-KGILGETFIPTRDANGKPIMAGMEAIRGQQEHYRVDGALGMDFV 2334
            GDPHM G  GQ+ +++G DG WYSL+ DD+  + IN+RVT+P+PD  P+   +T L+I++       +++VIEV  P+ +    CP G+SPCLA+G L + +DG+E  +LL         D  + +SA NLP  CR FG  + W R   +     R+L     + EWIL  D        C +Y+A     E  +   Q+ HA F+I TP  TVRL+ G  +Q       D   LPD   WQM++ +D  +V + A  G+LGET  P    NG+ +M G +A RG  E YRV  ALG+ F 
Sbjct:   14 GDPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEG-----YSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIA-----ENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFA 304
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig776.15925.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
Uncharacterized4.670e-17074.92protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.440e-14867.71protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.030e-14370.76protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
LNR8.080e-13260.33domain-containing protein n=2 Tax=Ectocarpus sp. C... [more]
Uncharacterized1.300e-12660.06protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.180e-12661.78protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized9.640e-12457.94protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.060e-9355.91protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.780e-4839.07protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Imm5.450e-4838.54upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig776contigE_fasciculatus_S2_contig776:11608..22941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score105.1
Seed ortholog evalue1.5e-19
Seed eggNOG ortholog2880.D7G7J7
Model size2352
KEGG koko:K13023
Hectar predicted targeting categoryother localisation
Exons23
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
Cds size2352
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842437.5195103-CDS-E_fasciculatus_S2_contig776:11607..116691696842437.5195103-CDS-E_fasciculatus_S2_contig776:11607..11669Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 11608..11669 +
1696842437.532245-CDS-E_fasciculatus_S2_contig776:11941..120371696842437.532245-CDS-E_fasciculatus_S2_contig776:11941..12037Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 11942..12037 +
1696842437.5453117-CDS-E_fasciculatus_S2_contig776:12326..123391696842437.5453117-CDS-E_fasciculatus_S2_contig776:12326..12339Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 12327..12339 +
1696842437.55536-CDS-E_fasciculatus_S2_contig776:12498..126351696842437.55536-CDS-E_fasciculatus_S2_contig776:12498..12635Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 12499..12635 +
1696842437.565332-CDS-E_fasciculatus_S2_contig776:13113..131851696842437.565332-CDS-E_fasciculatus_S2_contig776:13113..13185Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 13114..13185 +
1696842437.574795-CDS-E_fasciculatus_S2_contig776:13651..137231696842437.574795-CDS-E_fasciculatus_S2_contig776:13651..13723Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 13652..13723 +
1696842437.5850034-CDS-E_fasciculatus_S2_contig776:14179..142511696842437.5850034-CDS-E_fasciculatus_S2_contig776:14179..14251Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 14180..14251 +
1696842437.5949554-CDS-E_fasciculatus_S2_contig776:14708..147801696842437.5949554-CDS-E_fasciculatus_S2_contig776:14708..14780Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 14709..14780 +
1696842437.6053193-CDS-E_fasciculatus_S2_contig776:15580..156521696842437.6053193-CDS-E_fasciculatus_S2_contig776:15580..15652Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 15581..15652 +
1696842437.615871-CDS-E_fasciculatus_S2_contig776:16124..162701696842437.615871-CDS-E_fasciculatus_S2_contig776:16124..16270Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 16125..16270 +
1696842437.6264699-CDS-E_fasciculatus_S2_contig776:16600..167371696842437.6264699-CDS-E_fasciculatus_S2_contig776:16600..16737Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 16601..16737 +
1696842437.6490915-CDS-E_fasciculatus_S2_contig776:17142..172791696842437.6490915-CDS-E_fasciculatus_S2_contig776:17142..17279Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 17143..17279 +
1696842437.660667-CDS-E_fasciculatus_S2_contig776:17743..178151696842437.660667-CDS-E_fasciculatus_S2_contig776:17743..17815Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 17744..17815 +
1696842437.6704166-CDS-E_fasciculatus_S2_contig776:18366..184231696842437.6704166-CDS-E_fasciculatus_S2_contig776:18366..18423Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 18367..18423 +
1696842437.6823719-CDS-E_fasciculatus_S2_contig776:18731..187691696842437.6823719-CDS-E_fasciculatus_S2_contig776:18731..18769Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 18732..18769 +
1696842437.69206-CDS-E_fasciculatus_S2_contig776:19466..195471696842437.69206-CDS-E_fasciculatus_S2_contig776:19466..19547Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 19467..19547 +
1696842437.7009046-CDS-E_fasciculatus_S2_contig776:19859..199851696842437.7009046-CDS-E_fasciculatus_S2_contig776:19859..19985Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 19860..19985 +
1696842437.716998-CDS-E_fasciculatus_S2_contig776:20636..207891696842437.716998-CDS-E_fasciculatus_S2_contig776:20636..20789Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 20637..20789 +
1696842437.7301948-CDS-E_fasciculatus_S2_contig776:21058..213061696842437.7301948-CDS-E_fasciculatus_S2_contig776:21058..21306Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 21059..21306 +
1696842437.7445471-CDS-E_fasciculatus_S2_contig776:21537..216211696842437.7445471-CDS-E_fasciculatus_S2_contig776:21537..21621Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 21538..21621 +
1696842437.7549653-CDS-E_fasciculatus_S2_contig776:21823..220631696842437.7549653-CDS-E_fasciculatus_S2_contig776:21823..22063Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 21824..22063 +
1696842437.7642465-CDS-E_fasciculatus_S2_contig776:22245..223571696842437.7642465-CDS-E_fasciculatus_S2_contig776:22245..22357Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 22246..22357 +
1696842437.7737446-CDS-E_fasciculatus_S2_contig776:22888..229411696842437.7737446-CDS-E_fasciculatus_S2_contig776:22888..22941Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig776 22889..22941 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig776.15925.1prot_E_fasciculatus_S2_contig776.15925.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig776 11608..22941 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig776.15925.1

>prot_E_fasciculatus_S2_contig776.15925.1 ID=prot_E_fasciculatus_S2_contig776.15925.1|Name=mRNA_E_fasciculatus_S2_contig776.15925.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=784bp
AVNECLDLNTGRCTFASRYELDLGWCDLTDEDVEAGDLKACFENFGENNI
HQLCHKLWVIPALLVRLLGFMSSFRRTRRYMSSNDLTTPPAGMFDSLQAM
TLLYLGYNRLETLPAGMFGSLPALTNLNLRTNNLATLPAGIFDSLTGLTE
LDVTYNQMATLPTGIFSSVPSLTKLDLSFNGLTTLPAGMFDSDNQLTNMD
LSYNSLSSLAVGDFDNLIMLTDLDLSFNDLKTLPAGVFDSVPALSKLYVS
CSWVSPVEDDHAGRPWTEVFRCDTCSFVAPVGPLSSSQRTRRYLDNNELT
TLPAGVLDSLLALTILYRVTLPPLSPPSGFISLARRIRRELRKNDLTTLP
AGIFDFLPALIYLDLVSNDLTTLPDGLFESLEALITLDLSDNTDLECLPA
VPSIDTNTFFDDTIGTECGCDFGDFANPCSEQELQCTPGPVGYTCAVSAA
CDPNNDNRDCEADQVCCDDRRVCVDRDDEFLYNPTACGDPHMFGFFGQKF
DFTGEDGAWYSLIADDNMHINMRVTSPVPDLPEITYITGLSILATDEHGI
HHTMVIEVREPHNLDSSCPHGLSPCLADGSLSVFLDGEEKLLAPGTVFLA
QDVQVSAVNLPGACRSFGFEKYWERKRLENARHGRRLSTTVGMGEWILGD
PTATNMDECVEYVARAQAEEGGVFTHQSEHASFQIVTPKATVRLSHGRLH
QIAMRDPTDKYDLPDHLTWQMNMAVDHNEVSHDAKGILGETFIPTRDANG
KPIMAGMEAIRGQQEHYRVDGALGMDFVQNGHL*
back to top

mRNA from alignment at E_fasciculatus_S2_contig776:11608..22941+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig776.15925.1 ID=mRNA_E_fasciculatus_S2_contig776.15925.1|Name=mRNA_E_fasciculatus_S2_contig776.15925.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=11334bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig776:11608..22941+ (Ectocarpus fasciculatus EfasUO2)
GCAGTGAACGAGTGCCTGGACCTCAACACCGGCCGATGCACGTTCGCATC
CCGCTACGAACTGTGAGTGTCGATATCATATTTTGCAAAACATTGTGATA
ATGCCATGGATGGCATGCTCGTTTGGTCTTACGTCTTACCCCACGATTCC
GTGGGTTGTTCCCGAACTTCTTGGAACCATACCGATACCTTCATAAGATG
CCTTCCGACATCTTTTGGAAGGACACGTTGGTGCAGAATGGCAAGACACC
CGTGCGCCATGGAAAAAGCACTTCACCATCGACACGGTCGTATTTGACTT
TTTATCCCGGGGTGTTTCTGGGCGATTCTTCCAGGGATCTGGGCTGGTGC
GATTTAACCGATGAAGATGTCGAGGCGGGAGATTTGAAGGCATGCTTCGA
AAACTTTGGAGAAAACAACATCCATCAACTGTGAGTCTGACCACAAACTG
ATTTGGCTAGGGGGACGTCCCTCGCTATTCTTGCCGAAGAATTGGCACAG
CGTGTTGTTGGGAGAGACTGAATAAAGCCTACTACTCCGACGTTGGGGAC
ATAACCAAATAATGTGGTCCCACGATCCCTGGAGAGAATGAAACATGTAG
GTTTCAACCTCGGGGACATAATACGACTGTTGTTGTGGTTGTAGATTGCC
AGCAAGTCACCAAAATGCGTCTGACTCGCTCGTACAACCGTAACGGATGA
ACCGCCATGCTGCGGTAAGGTGTCACAAGTTGGTGCCGAGACTATTGCTC
TGCGTATGTATGGAAACCTTAAGAACATCGAACGCTGCGCTGATCCAAAG
TTGCATCATACGCTCGCTGCTTAAACCTTGGGCTGGCAACACTACCGATG
AGCGAACTTCTCATGACAAGATCGAAATGCAATCACCGAAGTGGGTGATA
CCTGCTCTTCTGGTGCGCCTCCTCGGCTTTATGTCGTCCTTCCGACGAAC
CCGCAGGTACATGAGCTCCAACGACCTGACGACGCCGCCTGCTGGGATGT
TCGATTCGCTCCAGGCCATGACGCTACTGTACGTATCGTGCACCTGAATG
TCGGCCGCAGAAGATGTCGGGGAACACGATGAACGGAGTTCTTCCGGTGT
AGCTCCCGTATTAAGCTGGTCGATTGACGACTTTCACGGATGTTGCTTTC
GATGAGTTGGAGTTCGTGTGTATGGGGCGTGCAGATGTATTCGGCGTGTT
TGCTAAACCGTGGGGAAAGAGCATATTCTATAACCTTCGGGAATAGAGTG
CGCGCATTGTCAAAAAAATGGTCTACTGTAATACATATATGTGTTGTGGT
GTAGCGACTACGATCCTCCGGGCAGTGTGTCTGGAAGAAGATCGGCTCTA
CGCTGTTCTAAGTTGCATGGATCCGCCACTTCAGTCATGCTTGACGATCG
AGCCTCCTAGCAGGCCACTCGTGATCGCAACAAAGTAACAGAAGCGGGTG
ACACTTGCCCCTTAGACTCCCTTCTTGGATCTCTCATCCTCCCGACAAAT
CCGCAGGTACCTGGGTTACAACCGTCTGGAGACGCTGCCTGCTGGGATGT
TCGGTTCTCTACCGGCTCTGACGAATCTGTACGTATCACACAGCTGATCG
TCCGCAGTAGAATGTATCCATGGGGGTAGACGATGAATGGGGGTCTTCGG
TGTAGCTCCCGTATTCAGATAGTCTATTGACGACTTTAACGGCCGTCTCT
TTCGATGGGTTGGACTTCGTGCGTATGGATGGTCGGCAGGCCGTGCAGAT
GTATTCGGCTCGCTTGCTAAATCGTGGGGAACGAGCCGATTCTCTATCCC
TCTCTTGTAGAACGGGCACGTGATAAACGATGCCGTGACTACGATGCTCT
AGGCAGTGTGTCTGGAAGAAGATCGGCTCTACGCTGTTCCGTGTTGCTGC
ATGAATCTACCACTGCATAGCGTGTGACGATTGAGTCTACCAAACTAGCG
GCCCATATGACCATAATGCAGTGTAACAGAAGCGTGTAACACTTGCTCCG
TTGTCACCCCTCAGACCTCTTTCACTCTCGCGACGAACCCGCAGGAACCT
ACGCACCAACAATCTGGCGACGCTGCCTGCTGGGATATTCGATTCTCTCA
CGGGTCTGACGGAACTGTACGTATCGTGTAGCTGGAATTCGCCGATACAA
ATAGAAGATGTCCATGGGGGAACACGATGAACGGAGGTGTTTCCTGCAGC
TCCCGTATCCATGCAGACTCCCACGGCCGTCGCTTTCGATGGGTTGGACT
TCGTGCGTATGAATGGCCGGCAGGTCGTGCAGATGTACATTCGACTCGCT
TGCTGAACCGCGGGGAACGAGCCGTTTCTTTAACCCTCTGCCGTGGACAG
TGCATTTTGAGCGGTGACTACGTTGTTTCAGGCAGTTTTGTCTGGAAGCA
GATCCGCTCTAAGCTGTTCCATGTTGCATGAGTCCACCACTGCATTCACG
TTTGACGGTCGACCCTCCCAAACTAGCGGCCTACTCGTGACCGCAATGCA
GAAAGAAACGGATGACACTTGCTCCTTCGTCTACCCTGTTCGACGTCTCG
CAACTCCCTGACGAACCCGTAGGGACGTCACCTACAACCAAATGGCGACG
CTGCCTACTGGGATATTCAGTTCTGTTCCGAGCCTGACGAAGCTGTACGT
ATCGCACAGTAGGCAGGGTGCTGAGACTATTGACTGATACGGGTTGACTA
CGGTATCGCGATTAACAGTAGTGTTGGGTGTCGCACCAATAGCTACCAGG
TTGAGAGACAAGTTCATATCGTCTTCTCTTGGAAGTCAGAGTTGGCGCAG
ACGGATGCCCGGGAGGTCAACCGAATATGTCCGGGTTGCTTGCGCACCGT
GGTCAATGATCAGCTTATTCTCTAGTATCATATTGTCGGCGAGAGGATAT
CTTTGGGTTCGGCGGCTATCTAGCCCCTTTGGCATATGGAAACCAGCTGT
TCTAAAGTCGCGTGTTGTCCTCATGATGCATTCTTGAATACCCAGGCCTT
CGCGCGCTTTCATGGTTGAAAAGAATCAACACAAAAATTGGTGACATCTG
CTTTGAAGTCACGCGTCCCTCGGCCTGTCTTGTGCCGCGACAAATGTACA
GGGATCTGTCCTTCAACGGCCTGACGACGTTGCCTGCCGGGATGTTCGAT
TCTGACAACCAGCTGACTAACATGTGAGCATCAGCTGCAGGTTCCACGGG
TAATTTTGACGAAGAACGCAAGAAAAATTATTCGATTCTTGGCTGCTACA
TGTAGATCGTGACGAAGGGCAGCACTGAGTGGTTGAACATTTTGGTGTGT
GCGTGATAGTCGTCACTGCCGATTACGACCCAGTGCGGATGTCTTGTCGG
GTGGTCACCCGAGTGGCCACCCGAACATTTTCAACTTTCTCGCGTGGACG
ATATCTGCTTTCACCGCCCCAACTCGAGCTGTCCCCGTTCTCCTAATGAA
CCAAAACAGAGCAGTAGCGGGTTGGTGCTGCCGGTCAGGATGTTTGCTTC
CTCTCATCAGCTACAGCTGTAGCTGAAATCTGGGTATGGTACGGCAGTAG
GTCGCGGGAAGTATTGTGGATGGATGATCCTGCGATGTACGAAAGCGTTC
AAAGGCTCCGCTAGGCACGATAAGTAACCATCGCACGACCTTTGTACACG
AATTTCGACTTGGAGGAGATGGATGGTCGAGAGGTACGCGAAAGAGCTCA
GGCTGCATGCTGCGGTATGCCAAGTCAGCCTGTCTGTCATTTCTAGTGTA
CGTATGTATTGAACGTGTTTCGTACTACAGTACGGTGACTCATGTGCACC
ATGATGGCATGATTGGAAACCCGAAACACATGTGACATCGAGCGCCGGTT
TTGTCTCGAGCTATCGGGTCTTCCGAGCCAGCGTGTCCGCCCACGGCCCA
GATGTAACATCAGACTTGCTCTTCTGTCGTCCGCCCCACCTCGGTCTGTC
TCGTCCCTCCAATATTATCACAGGGATCTGAGCTACAACTCCCTGTCGTC
GCTGGCTGTCGGGGACTTCGACAACCTGATCATGTTGACTGACCTGTGCG
TGTCGTACAGCTGCGAGTCTTTAGGACTATTTTCTCGATTGGGGTTGATT
GCGGTATCGCGGCGAACGGACCTGCTGAGCTCTTGCGCGAGTTTCGGCTC
ATTGAGTGACACCAGCGTGGTTCTCTACTTCGGCACGGCTTGGTGGGGAC
GGATGGCCGGGAGGTCCCAAATATGTACTTGGTTTGCTGTATACAGGAAT
GAGTCGGTTCTCTGACTTTCTCCTGCATTTATCGCGCTGTAAGAACTGGT
ACAGAAAATTCAATATTTTAGGCAGTACAGCAGTATGCCTGCAAGCAAAT
CGTCCATACGCTGTTCCAAGTTTCATTAATCCGCCACTGCATTTCACTTT
GGACGATCGAGCCCCCAGAGCTAGGAACCTAATGACCGCAATGCAGTAAC
TGAAACGGATGACGCTTGATCCTTTATCGCCACTTAGGCCTCTCTCGTCC
TCCCGATGAACCCGCAGGGACCTGTCGTTCAACGACCTGAAGACCCTGCC
TGCTGGGGTATTCGATTCTGTTCCGGCCCTGTCGAAACTGTACGTATCGT
GCAGCTGGGTGTCGCCGGTAGAAGATGATCATGCAGGCAGACCATGGACC
GAGGTGTTTCGATGTAGCTCCCGTATCCGGCTCGTCGAACAACGAGTTTC
ACGACCCTTGCATTCGGATGAGTTTGACTTCGTGTCCATGGATGGCCGGC
AGGTCGTGCAGATGTATTTCGACTCACTTGCTAAACCATGGGAAATGAGC
CGACTCTCTAACCCTCCTGTAGAGTACGTGCGATGCAGTGACAACGATGA
CCAGGCAGCATGCCTGAAAGCAGGTCTGCCGTACGTTGTCTCAAGTTGGA
TGAATCCGCCACTGCATTCATTTGCGACCATCGAGCTTCCCAACCACTGT
ATGTAGCAGCCACCTCGTGACCGAAATGCGGTAGCACAAGCAGGTGACAC
TTGCTCCTTTGTCGCCCCTGTTGGACCTCTTTCGTCCTCCCAACGAACCC
GAAGGTACCTCGACAACAACGAACTGACGACGCTGCCTGCTGGGGTGCTC
GATTCTCTCCTGGCCCTGACGATTCTGTACGTATCGGGCATCAGATGTCG
CCGGTAGAAGATATCCATGGGGGTAGATGATGAGCGGAGGTGTCTGGGTG
TAGCCCGTGTATCCAGCTCGTCCAACAATGATTTCCACGGCCTTCGCTTT
CGATGAGTTGGACTTCGTGCGTATGGGTGGCCGGCAGGTGACGCACATGT
ATTCGACTCGCTTGCTAGACCGTGGGAAATGAGCTGATTCTCTGACCCTC
TCCTGTAAGAGCGGGCATGTTGTGAAACACATGCCGTGACCACGATGCTC
CAGTATGTCTGGCACCAGATCGGCTGTACGCTATCCCAAGTTGCATGGAT
CCGCCACTCACTGCATTCACTTTCGACGATCAGGCCTCCCAAACTAATTT
TAAGCAGCTAATTCATGGCCGAAACACGACACCAGCGGGTGACTCTTCCT
CCTTTGTCGCCTCCTTCTGGATTTATCTCACTCGCCCGACGAATCCGTAG
GGAACTGCGCAAAAACGATCTGACGACGCTTCCTGCTGGGATATTCGACT
TTCTCCCGGCTCTGATTTATCTGTAAGTATCGCGCAGCTGGATGTCGCCG
GTAAAAGATGTCCGTAGGGGTAGACGATCGATGGAAGGTGTTTGGGTGTG
GCCCCCGTATTCATCTCGTCCAAGTACGACTTTCATGGCCGTCGCTTTCG
ATCAGCTGTACTTCGTGCGTATAGATGGCCGGTACGTCGTGCCAGGGTAT
TCGGCTTGCTTGATAACCCGTGGGGAATTGGCTGATTCTCCAGCCCTCGT
CTGTAGAGAAAGTGCGTTGTGAAAGACGATGCAGCGACCACGACGCAGAA
CGTCTGCAAGTCGATCGGCTGTACGCTGTTCTACGTTGCATGAATCCGCC
ACTGTATTCGCTTTCGACGATCGAGCCTCCCATGCTAGCAGCTCACCCGC
GACCGAAATTCAGTAACAAAAATGTGCGACCCCTAGTGCCTTGTCTTGCC
TTCTGGACCTCTGTCATCCTGCCGACGAACCCCCAGGGACCTAGTATCCA
ACGATCTGACGACGCTACCTGATGGGCTATTCGAATCTCTCGAGGCCCTG
ATAACTCTGTAAGTCCCCACCCAGCAGGTCGGTTTGAGGGAGTGGTCGAT
ATGGGGTTTACGTTGCACTTTATCGGGAGAGTTGGACAGGCTGGGCCCAT
CGCTAGAGTTCAACTGGTGGGCTCCGAACCCTTTGATTTCTGGAAAATCT
ATTCGGGGATGATGGATGGTCGCACGAGCGGGTCCACTCGCCATTGGAAT
TACGAGGAGTTGGCTGCTGGGTTTCTCATTCGCTGGCTGACCTGTGACAA
TTGAACGTACGTAACTGTCTGGTGATGATCAGGCCACATAGAATGACTTC
TTGCCATTCTAGATTCGTCTGTAAGTGACATGGTTGTCGATCGACCCTAA
CACTACAGTCTATAGAAGTATATAGAGAATCATCCATGATAATTTGATGC
CGTCTCCATGGTCATGTGATGCGGAAAGCCCTTGCGGGTCTTGATGGAGG
GTGCGTCTGGCAGTCCAGCTTGAGAAAGACTTGCTGGCCTCCTCGTCTAT
TTACATTTCATTCCCTGTCCCTTCCCGGCGAACTGCATTCTTGGGTGGCC
AATTCTCAGAGATCTCAGCGACAACACGGACCTGGAGTGTCTCCCGGCCG
TGCCATCAATCGATACGTGAGGACGAGTAATGTTGAGTAAGGTCGATACA
GGATACGGCCTTGAAACATATATTGGTGCTTTCGTGTAGGGTACACAGCT
CCTCACGATTTACTTGCATGAATGATTTCCTGCAGCTCAAGTGTCGAATC
AAGCCATGATCGTAGTTCCGCTGCTTCGATTTGCCGGGCAAGAATGCCCC
GCCTCGCCGGTGAGTCAGAGCCCCACACAAGTGGAGCGAAAGACCTCTTC
CATCCATTAACAGCCCAGGGAATTGCGCCGTGACTGAGTTTTCTCGCTAA
CTTCCGCAACCTACATCATGACAGCAATACCTTCTTCGACGACACCATCG
GCACAGAATGCGGTGCGTGGTGCCCAAGAGTAGCTGGGAGGGGCGTAACG
CGGGGTTAAGACCCATACAAGCAGCTTGCCGACGATCAGACGTCCGGTCC
AGCCTTCACACGTCGTCTTGGCGCATCACTGTCTTGGTGCAGCAAGCCAC
GATTCGCGTACTTGGGGTCTAGGGCGTTTCGTCTGTGTGCTTGTTCGCGC
AGGATCCCGCCAACCTCTGCTCGACGAGCGGTGAAGTGTAGCAGTGCAAA
TCGAATACTACAGCCGGTGCTTGTCACGGTGTGTACGCATCGGTTGATCT
CTGGTATGTGCTGGACAATTTGGCATGCAAATCGGCGTTGGTGTTCGGCT
GAACTCAACAAATGGAAATAAATTTTCCATGGCCCTGAAACGGAGCTCTG
TTCTACAATTCAATCGGCTTATGAAGTTGTCGGGGATACGTGCTCTGCAC
TGGACAGCATGCCAAACCTACAAAAGCTTTCCTTCCATGGGAGTTGTATT
TGAGAATAGTTCATAGCAAATATGGTGTCATTGTGTTCTGTGGGTATGTA
AGAGATATTCGAGGCTTGCAGTACGTATTTCCTAAGTTGGCTTCCTCTGC
ATCGAACGTGCAAGGATTGCAATGATGCACTGCAGTCTAATCTATAAGCG
CCATACATCAAACCACGAAACTCGCTAACGCTTACGTCTGTGCCGCGGAC
CGCCTGCAGGGTGTGATTTCGGGGACTTCGCCAACCCGTGCAGCGAACAA
GAACTGCAATGCACCCCTGGACCCGTAGGGTACACCTGTGGTGAGAGGAA
CAACCCAGGCAATCTGAATCTGGTGTGGACAGTTTTCGTCGTTTTGATCA
AGGATCTTTGCCGTGCCCTATCTCGTCGAGATCACCTTTCGACAAGGGGC
ACTCGGGCAAACGGCATCGTGTCAAATTCAAATACGGGTTCAGCGGAGTA
CAGACATCACTACAATTTCTTAACCAGGCTTGCGTTGAATTGGGCCTGAA
CAAATCGAGCATAGGTCTGCACACGGTGGACTTTCCCCCAAGGGCGTAAT
TCCATGTTAAGGTTCTCTCCGACGTCGCCTGCCGTTGTACTTCCCTTTGA
AGCGGTGTCGGCGGCGTGTGATCCGAACAACGACAACCGCGACTGCGAGG
CAGACCAGGTTTGCTGTGACGATAGGCGTGTCTGCGTGGATCGCGATGAC
GAGTTCCTCTACAACCCCACGGCCTGCGGTGAGATACTGACTACCTCTAA
AAGTTTTTATGACCTACAGTAATTCCAAAGTGAAGCACGAGCTGTAGCCT
ATTGATTCTTCTTGTTGTCTGTCAACAAGTCCTTGTGATTGGTCTGACTC
CCTGACTCGCAGCGAAGGGTGAGTATCTCGCACGAGTCGCTTACGGAGCG
AGATCAGCGCATTGATGACTACTGCTTCAGGCATGGTCCCCATCAACGAA
TCCCGTTTAATGCTTGCGGCAGACGGATGGTCAGGTCGAGCACAATCAAA
TCTTGAAGAGTGCTCTCGTACGCTGTTTGAGGCCTCGCGTTGGGGGCGCC
CAGGGTATTACACCGCCGAGTTTCCACGGAAAAGTTTGAACTACGCTCTC
TCTTTGCCGCCCTGCGCTGCCCCGAGTCATTTTGACGCACCTCGTCCTGG
CGACGAACCCAAATGCATGGCACTATCACGTGCAAGTGGTACTTCTTGGT
CACCGACACGAAACTCAATGATTGTAGTCGCGCATGGGGACTGTCTGAAG
TGCTGGGGCGCGTTTCATGGGCTCGTTGGTTTGCATGTGGCAGAAACCCT
ACCGGAAGCCTTCTTGTATGATTCTTACCCCTTCAATTTCAATCAATCTC
AACCAACGCCTACTTTGATCACTCCTCAGGCGATCCTCACATGTTTGGCT
TTTTTGGGCAGAAGTTCGACTTCACCGGAGAGGACGGGGCGTGGTACTCA
CTCATTGCCGACGACAACATGCACATCAACATGCGGGTCACGTCGCCCGT
CCCCGACCTACCCGAGATCACGTACATCACCGGTATGGACATAGCCTATC
TTTGTATATTTATGTGCCTTATGCCGCGCTGATTAAGGGCTTATTCGGTT
AATGAACCTCATGACAATCAGAGAAGGAGGGCGGCAAAGCACACCGAAAA
CAACGCCATTGAGTGCCGTCTCCGGTGTCTAGGACCAACCTGACGTCGTC
GAGGAAACAGGGGTAGCGTTCCAACTCCTTAGCCGCGCGTGCCATCCACT
CTCACCTCACGTCCGAAATTTCTTCATTTTGCTTTCCGTCGACCCAAACA
GGTTTGTCTATCCTGGCCACCGACGAGCATGGCATTCACCATACCATGGT
AATCGAAGTCAGGGAACCCCACAACCTCGACAGCTCTTGCCCACACGGAC
TGTCGCCATGCCTAGCGGATGGCTCTCTGAGCGTGTTTCTCGACGGTGAA
GAGAAGCTGCTCGCCCCCGGGACAGTTTTCCTCGCCCAAGACGTGCAAGT
CTCGGCGGTCAACCTTCCTGGAGCCTGCCGCTCGTTCGGCTTCGAAAAGG
TTCGCGGATCATGTGTCCGTAACCTTCTCACTTTTCGCCGTATCTCACGG
ATGTATTCCTCTCTGGTCCCCAGCCCTGCTTTCGCTTGCCTCGCTGATCG
CTTGTCTGCCTTCGTTTCGGGGGTAGATTGGGTTCGAAAATGGCGTTTTG
GAAACCAATTCAATCGGTCTCTTTCAGCCGTTTCGCCCGCTTATTTCCCG
AAATGTCCGGCCATGCTGACCACCCCACAGTACTGGGAGCGCAAGAGACT
CGAGAACGCCAGGCACGGTCGCCGCTTGAGCACGACGGTGGGCATGGGCG
AATGGATCCTCGGGGTAAGAGTTATCGTTTGTTTTCTGCCCACAAGCGCA
GTTGCTGATGACGGAGACGTCAAGCTTACAACAGCATGCGTCACGAATGC
TTTGATCAGCAAAGAAGTAGAGGCAGGCTTCTGTATCCCTAGGTGAAATT
CACGGTTGGTCCCGCCATGACGATTCTTTCGTTTCTTCCCCTTGCGCCCT
CGTGTTTCTTCTCAAGGACCCTACCGCCACTAATATGGACGAGTGCGTCG
AGTACGTGGCTCGCGCCCAAGCTGAAGAAGGTGGGGTATTTACTCACCAG
TCCGAGCACGCCTCCTTCCAGATAGTGACTCCCAAGGCTACGGTCCGCCT
GAGCCACGGCAGGCTTCACCAGATCGCCATGCGTGACCCTACGGACAAGT
ACGATCTCCCCGATCACCTGACCTGGCAGATGAACATGGCCGTTGACCAC
AATGAGGTACGAGCCGGTGGGTACAACCCGTCAGTACCCGACACCCAGTC
AGCGGGAAGCTCCAGTTTTTTCGTGGAGGGCTGAAGCATTGTCTGAGGCT
TTAAGAAAGCGTCATCAGGTACATTTGTAGGTTGTAAAAAGCTCCGACAC
ATTTTCTCCCGCGCTGTCCGGCGAACTTTCACGCACAGGTCAGTCACGAT
GCCAAAGGCATTCTTGGCGAGACGTTCATTCCGACGCGTGACGCCAACGG
CAAGCCGATCATGGCCGGAATGGAGGCGATCCGAGGACAGCAGGAACACT
GTAAGACGCCCGAGAGCACCGCTGGGTTGATGTTATGGCCCTGCAGTTGG
GCGCCGTCCAACCACCGATGCTTGCTGTTGCAAGACATGAAAACCCTACG
AAATGCACTAAACTTGGTTTGTCAGGCATGTTTACAACTTTAGAACACCC
GCACCTATCATACGGGTACTGATGTCCGAGCGAACAGCCTCGATTCTTAA
TACGGCGAATGACAGTTGGAATATCACGTACAAGTTGTTACTCGAAATGT
TATTCGTACGGTAGGTATGCATAGGTGTTCGTGTAGGATCACTGCCTGTG
AAACGGTCTAAGCGCCGCGCAAGCCGACCAACCCCCCATTGATATTACTC
GTAGTCATTCGAGTCATACAGTGTCCGATTGTGGAGGTTGTGGTTTTGGG
TCGTTCTCTTGGGTTATTAGGAAAAACCCTGTGCAGAGCACTTCCGCCGG
CAGTCTGATGATTTTCCTCAAATCCGTAATCGCGGCAACTCTTGTGACGT
TTAATTCCCCGCTTTCTCCATGGGTTGGCAGATCGCGTCGACGGGGCATT
GGGGATGGACTTTGTTCAAAATGGGCACCTTTAA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig776:11608..22941+

>mRNA_E_fasciculatus_S2_contig776.15925.1 ID=mRNA_E_fasciculatus_S2_contig776.15925.1|Name=mRNA_E_fasciculatus_S2_contig776.15925.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2352bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig776:11608..22941+ (Ectocarpus fasciculatus EfasUO2)
GCAGTGAACGAGTGCCTGGACCTCAACACCGGCCGATGCACGTTCGCATC
CCGCTACGAACTGGATCTGGGCTGGTGCGATTTAACCGATGAAGATGTCG
AGGCGGGAGATTTGAAGGCATGCTTCGAAAACTTTGGAGAAAACAACATC
CATCAACTGTGTCACAAGTTGTGGGTGATACCTGCTCTTCTGGTGCGCCT
CCTCGGCTTTATGTCGTCCTTCCGACGAACCCGCAGGTACATGAGCTCCA
ACGACCTGACGACGCCGCCTGCTGGGATGTTCGATTCGCTCCAGGCCATG
ACGCTACTGTACCTGGGTTACAACCGTCTGGAGACGCTGCCTGCTGGGAT
GTTCGGTTCTCTACCGGCTCTGACGAATCTGAACCTACGCACCAACAATC
TGGCGACGCTGCCTGCTGGGATATTCGATTCTCTCACGGGTCTGACGGAA
CTGGACGTCACCTACAACCAAATGGCGACGCTGCCTACTGGGATATTCAG
TTCTGTTCCGAGCCTGACGAAGCTGGATCTGTCCTTCAACGGCCTGACGA
CGTTGCCTGCCGGGATGTTCGATTCTGACAACCAGCTGACTAACATGGAT
CTGAGCTACAACTCCCTGTCGTCGCTGGCTGTCGGGGACTTCGACAACCT
GATCATGTTGACTGACCTGGACCTGTCGTTCAACGACCTGAAGACCCTGC
CTGCTGGGGTATTCGATTCTGTTCCGGCCCTGTCGAAACTGTACGTATCG
TGCAGCTGGGTGTCGCCGGTAGAAGATGATCATGCAGGCAGACCATGGAC
CGAGGTGTTTCGATGTGACACTTGCTCCTTTGTCGCCCCTGTTGGACCTC
TTTCGTCCTCCCAACGAACCCGAAGGTACCTCGACAACAACGAACTGACG
ACGCTGCCTGCTGGGGTGCTCGATTCTCTCCTGGCCCTGACGATTCTGTA
CCGGGTGACTCTTCCTCCTTTGTCGCCTCCTTCTGGATTTATCTCACTCG
CCCGACGAATCCGTAGGGAACTGCGCAAAAACGATCTGACGACGCTTCCT
GCTGGGATATTCGACTTTCTCCCGGCTCTGATTTATCTGGACCTAGTATC
CAACGATCTGACGACGCTACCTGATGGGCTATTCGAATCTCTCGAGGCCC
TGATAACTCTAGATCTCAGCGACAACACGGACCTGGAGTGTCTCCCGGCC
GTGCCATCAATCGATACCAATACCTTCTTCGACGACACCATCGGCACAGA
ATGCGGGTGTGATTTCGGGGACTTCGCCAACCCGTGCAGCGAACAAGAAC
TGCAATGCACCCCTGGACCCGTAGGGTACACCTGTGCGGTGTCGGCGGCG
TGTGATCCGAACAACGACAACCGCGACTGCGAGGCAGACCAGGTTTGCTG
TGACGATAGGCGTGTCTGCGTGGATCGCGATGACGAGTTCCTCTACAACC
CCACGGCCTGCGGCGATCCTCACATGTTTGGCTTTTTTGGGCAGAAGTTC
GACTTCACCGGAGAGGACGGGGCGTGGTACTCACTCATTGCCGACGACAA
CATGCACATCAACATGCGGGTCACGTCGCCCGTCCCCGACCTACCCGAGA
TCACGTACATCACCGGTTTGTCTATCCTGGCCACCGACGAGCATGGCATT
CACCATACCATGGTAATCGAAGTCAGGGAACCCCACAACCTCGACAGCTC
TTGCCCACACGGACTGTCGCCATGCCTAGCGGATGGCTCTCTGAGCGTGT
TTCTCGACGGTGAAGAGAAGCTGCTCGCCCCCGGGACAGTTTTCCTCGCC
CAAGACGTGCAAGTCTCGGCGGTCAACCTTCCTGGAGCCTGCCGCTCGTT
CGGCTTCGAAAAGTACTGGGAGCGCAAGAGACTCGAGAACGCCAGGCACG
GTCGCCGCTTGAGCACGACGGTGGGCATGGGCGAATGGATCCTCGGGGAC
CCTACCGCCACTAATATGGACGAGTGCGTCGAGTACGTGGCTCGCGCCCA
AGCTGAAGAAGGTGGGGTATTTACTCACCAGTCCGAGCACGCCTCCTTCC
AGATAGTGACTCCCAAGGCTACGGTCCGCCTGAGCCACGGCAGGCTTCAC
CAGATCGCCATGCGTGACCCTACGGACAAGTACGATCTCCCCGATCACCT
GACCTGGCAGATGAACATGGCCGTTGACCACAATGAGGTCAGTCACGATG
CCAAAGGCATTCTTGGCGAGACGTTCATTCCGACGCGTGACGCCAACGGC
AAGCCGATCATGGCCGGAATGGAGGCGATCCGAGGACAGCAGGAACACTA
TCGCGTCGACGGGGCATTGGGGATGGACTTTGTTCAAAATGGGCACCTTT
AA
back to top