mRNA_E_fasciculatus_S2_contig7755.15922.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7755.15922.1
Unique NamemRNA_E_fasciculatus_S2_contig7755.15922.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW1_9PHAE)

HSP 1 Score: 579 bits (1492), Expect = 1.470e-206
Identity = 287/319 (89.97%), Postives = 300/319 (94.04%), Query Frame = 1
Query:    1 MAEPEGVKAWFACGPGMCDMDAATTSDGLRIFAGGAEGMVKV----------FDPKSSSIQNAVAELNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLKDMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYFAKEAVGGSSEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNTDQENWRHLK 927
            M+EPEGVKAWFACGPGMCDMDAATTSDGLRIFAGGAEG VKV          FDPKSSSIQ+AVAELNLD  D+GDEG AVTAVAVSPAGDELAVGLRNGDVKL+GLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTL DM GGVKSVDWDP GDFLAASGFDGTVKVWRVDPSLD+LSTEVVM+E YF KEA+GGS+EFEHLGK+AWHPDGKSLSVTGAADPLMLMRDSW+RSIIVPE+AEDGGHTKEITIAAFSPDGGRHLATAALDGR+VVWDVEE+LAVKTFVNTDQENWRHLK
Sbjct:    1 MSEPEGVKAWFACGPGMCDMDAATTSDGLRIFAGGAEGTVKVGAKPGDGEAVFDPKSSSIQDAVAELNLDVNDDGDEGLAVTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLTDMSGGVKSVDWDPCGDFLAASGFDGTVKVWRVDPSLDDLSTEVVMSESYFVKEAMGGSAEFEHLGKLAWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPENAEDGGHTKEITIAAFSPDGGRHLATAALDGRLVVWDVEERLAVKTFVNTDQENWRHLK 319          
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: Mcl1_mid (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G152_ECTSI)

HSP 1 Score: 593 bits (1529), Expect = 3.660e-204
Identity = 290/309 (93.85%), Postives = 302/309 (97.73%), Query Frame = 1
Query:    1 MAEPEGVKAWFACGPGMCDMDAATTSDGLRIFAGGAEGMVKVFDPKSSSIQNAVAELNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLKDMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYFAKEAVGGSSEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNTDQENWRHLK 927
            M+EPEGVKAWFACGPGMCDMDAATTSDGLRIFAGGAEGMVKVFDPKSSSIQ+AVAELNLD  DEGDEG AVTAVAVSPAGDELAVGLRNGDVKL+GLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTL DM GGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLD+LSTEVVM+E YF KEA+GGS+EFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSW+RSIIVPE+AEDGGHTKEITIAAFSPDGG+HLATAALDGRVVVW+VE+KLAVKTFVNTDQENWRHLK
Sbjct:    1 MSEPEGVKAWFACGPGMCDMDAATTSDGLRIFAGGAEGMVKVFDPKSSSIQDAVAELNLDVNDEGDEGLAVTAVAVSPAGDELAVGLRNGDVKLHGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLTDMSGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDDLSTEVVMSESYFVKEAIGGSAEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWKRSIIVPENAEDGGHTKEITIAAFSPDGGQHLATAALDGRVVVWNVEDKLAVKTFVNTDQENWRHLK 309          
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: Mcl1_mid (domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IHN9_GUITC)

HSP 1 Score: 128 bits (322), Expect = 1.940e-29
Identity = 86/290 (29.66%), Postives = 147/290 (50.69%), Query Frame = 1
Query:   46 GMCDMDAATTSDGLRIFAGGAEGMVKVFD-PKSSSIQNAVAELNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLKDMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYFAKEAVGGSSEF--EHLGKVAWHPDGKSLSVTGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNTDQ 906
            G C M  A      ++   G++ +VK+ D  K     N V E+   D   G     V  VAVSP G  +A G     V L+ +   DF+  +TR + P+  LA+  +D   +A  S++  I++V  +N  +  TL+  +GGVKSV +DP+ +FL ++G D ++++W V     E  TE     +   K+A     +    +L +VAW PDG   +V G+ D  +  R+ W+ +     ++  GGH + +T  AFS +G  +L +    G +V+WD+  + ++K + N+ +
Sbjct:   25 GFCSMQFAPGIKDRKLVTCGSDCLVKIHDLEKYGDEGNDVEEI---DHFHG----PVHVVAVSPNGQSVAAGGEESLVALFRMEDADFERNVTRCSLPIRDLAFS-QDSSFLAIASDDSEIKIVNVNNVEEFKTLQGHEGGVKSVSFDPKNEFLLSTGSDRSLRIWDV-----ESGTEKHKISQVLEKDAASSIKDGVPANLCRVAWSPDGSIFAVAGSRDIKIFEREDWKEA-----ESCVGGHLQNVTDLAFSSNG-LYLLSVDTSGVIVIWDISSRESIKRYENSSK 295          
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S918_OSTLU)

HSP 1 Score: 123 bits (309), Expect = 8.890e-28
Identity = 82/233 (35.19%), Postives = 128/233 (54.94%), Query Frame = 1
Query:  211 VTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLK-DMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDP-SLDELSTEVVMAERYFAKEAVGGSSEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNTD 903
            V A A SP G   A    +  VKL+ L K  F++ +TRF+ PV  +A+   DG  +AA  E+  ++V++  + + +          +KSV +DPRGD+LAA+  +G V VW + P S DE + +V    +  A EA   + E   L  VAW PDG+ L+V G  + +      +ER      + E  GHT  I++  +SP+G ++L TA+ D  V+VWDV++KLA+    +T+
Sbjct:    5 VNACAASPCGTLAATASSDYSVKLFSLEKKAFEANVTRFSLPVHCVAWSA-DGKYVAAGGEDAEVKVIKMEDKTVLHVFPCQRSKCIKSVAFDPRGDYLAATDENGMVVVWLLKPTSEDEEAGDV----KLHATEAPLATGESPLLNAVAWRPDGQILAVPGRENDVTF----FERGTFKQIEWELKGHTDAISLIRWSPNG-KYLVTASADKSVIVWDVKKKLAIAKMTDTE 227          
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: WD40-repeat-containing (domain protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QPW1_9FUNG)

HSP 1 Score: 120 bits (301), Expect = 9.590e-27
Identity = 84/267 (31.46%), Postives = 134/267 (50.19%), Query Frame = 1
Query:   73 TSDGLRIFAGGAEGMVKVFDPKSSSIQNAVAELNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLKDMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYFAKEAVGGSSEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEK 873
            T +G  I   G++ +V++F PK       +++L+          ++V+AVA      +   G  +G V L+G P  +F+  +TR T PV  + +   +G  IA  S+E  I+ V   +   V+TLK     VKS+ +DP G+FL ++G +G ++VW V    D+    V +             SE   LG VAWHPDG   +V G  +       SW +++   +D     HT  ++I A+SP+G  +LA+AALD  +VVW+   K
Sbjct:   23 TENGTSIITAGSDSLVRLFGPKRDIDIVTLSDLS----------YSVSAVAAHKG--KFIAGTEDGTVALFGYPSKEFEKFITRCTLPVRCVQFS-PNGLKIAIASDELSIKFVGIQDICDVVTLKGHSKSVKSLSFDPNGEFLVSTGCEGDIRVWHVRTENDDEPVCVKILSGILPST----ESESPLLGTVAWHPDGSCFAVPGKNNG------SW-KTLYTLKDI----HTNNVSILAWSPNG-YYLASAALDCHLVVWEATGK 260          
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: Mcl1_mid (domain-containing protein n=5 Tax=Beauveria TaxID=5581 RepID=A0A2S7YA23_BEABA)

HSP 1 Score: 108 bits (269), Expect = 1.850e-22
Identity = 78/278 (28.06%), Postives = 133/278 (47.84%), Query Frame = 1
Query:   67 ATTSDGLRIFAGGAEGMVKVFDPKSSSIQNAVAELNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLKDMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYFAKEAVGGSSEFEHLG--KVAWHPDGKSLSV-TGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTF 891
            A T DG R+   G+   ++++   S          N+DD  E  +  AV A   S       VG  +G V L+ L    F+  L R + PV  +A     G   A  S+E  +++V   + S+V  L++     + V +DP+   +A SG DG V ++ +     EL  ++         + V G+ E +     K AWHPDG++ +V T   D  ++ ++ WE+     +   + GH  +IT  A+SP+G   LA+AA DG+++VWD + +  ++ +
Sbjct:   23 AYTPDGTRLVTVGSNNTIRLYTTGSDGEPT-----NIDDCQE--QNIAVAASKTS-----FVVGSEDGTVSLFSLETASFEKFLLRTSLPVRDVALTPGAGTWCAVTSDELTVKIVNTQDISQVRHLREHGRPARHVAFDPKASLVAVSGTDGIVYIYSLTAEEPELIRKI---------DGVIGALESDGTASSKAAWHPDGRAFAVPTPTRDIQVISKNDWEK-----QRCFENGHMGDITALAWSPNGAM-LASAAKDGKILVWDTKTQAVLQRY 273          
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: Mcl1_mid (domain-containing protein n=4 Tax=Ajellomycetaceae TaxID=299071 RepID=A0A1J9QW04_9EURO)

HSP 1 Score: 107 bits (267), Expect = 3.330e-22
Identity = 75/276 (27.17%), Postives = 131/276 (47.46%), Query Frame = 1
Query:   73 TSDGLRIFAGGAEGMVKVFDPKSSSIQNAVAELNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLKDMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYFAKEAVGGSSEFEH--LGKVAWHPDGKSLS-VTGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTF 891
            T +G ++   G+   +++F     +I        +DD  +G  G   T        D   +G  +G V  Y L       +L R   PV  L+   KDGD +A  S+E  +++V   + + V  L++   GVK V++DP G F+A SG DG + ++ VD    EL  ++         + V G  E +H    +  WHPDG++ + V    D  ++    W +     ++A  GGH  +IT  A+SP+G   LA+A  D ++++W+ + +  ++ +
Sbjct:   24 TPNGRQVITAGSNSAIRIF-----TIGEKDEPKTVDDGVDGRLGIVAT-------NDSFIMGAEDGTVWKYELETGQMDKLLVRCALPVRDLSLS-KDGDWVAVASDELVVKIVNIHDMTIVKYLREQSKGVKHVNFDPSGRFIAVSGSDGIIYIYSVDGPQPELVKKI---------DGVIGRLESDHEATSRAVWHPDGRAFAAVEPTRDIAVVSTSDWTK-----QNAFTGGHNADITSLAWSPNGAL-LASAGADRQILLWETKTQNILRRY 271          
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: WD (domain, G-beta repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX81_ACACA)

HSP 1 Score: 107 bits (266), Expect = 4.740e-22
Identity = 78/279 (27.96%), Postives = 127/279 (45.52%), Query Frame = 1
Query:   31 FACGPGMCDMDAATTSDGLRIFAGGAEGMVKVFDPKSSSIQNAVAELNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLKDMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYFAKEAVGGSSEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVE 867
            FA   G CD+      +   + + GA+G V+ +D    ++ +      L D D        T +AVS   + +AVG  +  V L   P  +F+ +L R   PV  +A+   DG  +A   E   I++V   +N++V   K   G V+S+ +DPRGD+ A++G DGTV++W +    +     ++           G       L ++ WHP G  L+V      ++L RD+WE S  +      G H K + +  +SP+G    +    D  V VW  E
Sbjct:    9 FAHSEGKCDV---VYVEEQSVVSSGADGQVRRYDTSPEALASFADPSLLYDHDS-----EATCLAVSKEREWIAVGFSDNQVHLLKYPSGEFEKILIRLQWPVRHVAFS-PDGLYLAVAGEG-SIKLVNLVDNTQVTVFKGHQGAVRSLAFDPRGDYFASTGADGTVRIWSLGDCAEVKCLPILPK---------GEPESPPLLSRLDWHPHGALLAVPTDDGVVLLARDTWEVSGKL-----QGEHKKGVNLFRWSPNGAYGASAGHQDKTVFVWRAE 263          
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: Mcl1_mid (domain-containing protein (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2HJP0_SCYLI)

HSP 1 Score: 105 bits (261), Expect = 2.030e-21
Identity = 77/279 (27.60%), Postives = 131/279 (46.95%), Query Frame = 1
Query:   73 TSDGLRIFAGGAEGMVKV----FDPKSSSIQNAVAE-LNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLKDMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYFAKEAVGGSSEFEHLGKVAWHPDGKSLSV-TGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTF 891
            T DG ++   G+    +V    FD + ++I +   + + +D  +    GF VT             G  +G V  + L  + F   L R + PV  +    KDG+  A  S+E  +++VR S+ S V+ L+D    VK + +DP G ++A S  DG V V+ +     EL  ++    R          +E E   +VAWHPDG++ +  T   D  ++ R  WE      +     GH  ++T  A+SP+G   LATA  D ++++W+ + +  + T+
Sbjct:   25 TPDGTKLVTVGSNNTTRVYKTGFDGEPTNIDDCQEQNMGVDSTN----GFFVT-------------GSEDGTVSKFSLDTMSFDKFLMRCSLPVRDVTLS-KDGEWCAVASDELTVKIVRTSDTSSVIYLRDQPKPVKHISFDPSGKYIALSCTDGIVYVYTLYNDEPELIRKIDGLIRSV-------ETESETSSRVAWHPDGRAFAAPTATRDIQVVSRGDWEN-----QRTFSNGHMGDVTALAWSPNGAM-LATAGKDRKLILWETKTQSVIATY 272          
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Match: Mcl1_mid (domain-containing protein n=1 Tax=Scytalidium sp. 3C TaxID=2487125 RepID=A0A425BIW4_9PEZI)

HSP 1 Score: 104 bits (260), Expect = 2.740e-21
Identity = 74/274 (27.01%), Postives = 125/274 (45.62%), Query Frame = 1
Query:   73 TSDGLRIFAGGAEGMVKVFDPKSSSIQNAVAELNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKLDFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLKDMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYFAKEAVGGSSEFEHLGKVAWHPDGKSLSV-TGAADPLMLMRDSWERSIIVPEDAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTF 891
            T DG ++   G+    +V+              N+DD  E + G       V         G  +G V  + L  + F   L R + PV  +A   KDG+  A  S+E  +++V+ S+ S V+ L++    VK + +DP G ++  S  DG V V+ +     EL  +V    R          ++ E   KVAWHPDG++ +  T   D  ++ R  WE+  +        GH  ++T  A+SP+G   LATA  D ++V+W+ + +  + ++
Sbjct:   25 TPDGTKLITVGSNNTTRVYKTGFDGEPT-----NIDDCQEQNMG-------VDSTNSFFVTGSEDGTVSKFSLDTMGFDKFLMRCSLPVRDVALS-KDGEWCAVASDELTVKIVKTSDTSSVIYLREQSKPVKHISFDPSGKYITLSCTDGIVYVYTLINDEPELIRKVDGLIRPV-------ETDSEISSKVAWHPDGRAFAAATATRDVQVISRGDWEKQRMF-----SNGHVGDVTALAWSPNGAI-LATAGKDKKIVLWETKSQTVITSY 272          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7755.15922.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.470e-20689.97protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Mcl1_mid3.660e-20493.85domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Mcl1_mid1.940e-2929.66domain-containing protein n=1 Tax=Guillardia theta... [more]
Uncharacterized8.890e-2835.19protein (Fragment) n=1 Tax=Ostreococcus lucimarinu... [more]
WD40-repeat-containing9.590e-2731.46domain protein n=1 Tax=Jimgerdemannia flammicorona... [more]
Mcl1_mid1.850e-2228.06domain-containing protein n=5 Tax=Beauveria TaxID=... [more]
Mcl1_mid3.330e-2227.17domain-containing protein n=4 Tax=Ajellomycetaceae... [more]
WD4.740e-2227.96domain, G-beta repeat-containing protein n=1 Tax=A... [more]
Mcl1_mid2.030e-2127.60domain-containing protein (Fragment) n=1 Tax=Scyta... [more]
Mcl1_mid2.740e-2127.01domain-containing protein n=1 Tax=Scytalidium sp. ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7755contigE_fasciculatus_S2_contig7755:540..4963 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score591.7
Seed ortholog evalue2e-166
Seed eggNOG ortholog2880.D7G152
Preferred nameWDHD1
Model size927
KEGG koko:K11274
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000724,GO:0000725,GO:0000727,GO:0000775,GO:0000785,GO:0000790,GO:0000819,GO:0000981,GO:0001302,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003700,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006271,GO:0006273,GO:0006281,GO:0006302,GO:0006310,GO:0006325,GO:0006342,GO:0006355,GO:0006357,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007275,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009790,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0019219,GO:0019222,GO:0019899,GO:0022402,GO:0022616,GO:0030702,GO:0031298,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033260,GO:0033301,GO:0033554,GO:0033567,GO:0034085,GO:0034641,GO:0034645,GO:0035185,GO:0040029,GO:0042023,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043954,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045448,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0061641,GO:0065007,GO:0070013,GO:0070063,GO:0070827,GO:0070828,GO:0070829,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0098687,GO:0098813,GO:0140014,GO:0140110,GO:1901360,GO:1901363,GO:1901576,GO:1902679,GO:1902969,GO:1903047,GO:1903461,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Exons7
EggNOG free text desc.heterochromatin maintenance
EggNOG OGsKOG1274@1,KOG1274@2759
Cds size927
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7755.15922.1prot_E_fasciculatus_S2_contig7755.15922.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7755 540..4963 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842437.3089457-CDS-E_fasciculatus_S2_contig7755:539..6241696842437.3089457-CDS-E_fasciculatus_S2_contig7755:539..624Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7755 540..624 -
1696842437.323157-CDS-E_fasciculatus_S2_contig7755:1169..12801696842437.323157-CDS-E_fasciculatus_S2_contig7755:1169..1280Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7755 1170..1280 -
1696842437.332097-CDS-E_fasciculatus_S2_contig7755:1620..16851696842437.332097-CDS-E_fasciculatus_S2_contig7755:1620..1685Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7755 1621..1685 -
1696842437.3408244-CDS-E_fasciculatus_S2_contig7755:2041..21931696842437.3408244-CDS-E_fasciculatus_S2_contig7755:2041..2193Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7755 2042..2193 -
1696842437.3526707-CDS-E_fasciculatus_S2_contig7755:2677..28141696842437.3526707-CDS-E_fasciculatus_S2_contig7755:2677..2814Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7755 2678..2814 -
1696842437.3618956-CDS-E_fasciculatus_S2_contig7755:3202..34561696842437.3618956-CDS-E_fasciculatus_S2_contig7755:3202..3456Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7755 3203..3456 -
1696842437.3717632-CDS-E_fasciculatus_S2_contig7755:4840..49631696842437.3717632-CDS-E_fasciculatus_S2_contig7755:4840..4963Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7755 4841..4963 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7755.15922.1

>prot_E_fasciculatus_S2_contig7755.15922.1 ID=prot_E_fasciculatus_S2_contig7755.15922.1|Name=mRNA_E_fasciculatus_S2_contig7755.15922.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=309bp
MAEPEGVKAWFACGPGMCDMDAATTSDGLRIFAGGAEGMVKVFDPKSSSI
QNAVAELNLDDKDEGDEGFAVTAVAVSPAGDELAVGLRNGDVKLYGLPKL
DFKSMLTRFTAPVLGLAYGMKDGDVIAACSEEPGIRVVRRSNNSKVLTLK
DMDGGVKSVDWDPRGDFLAASGFDGTVKVWRVDPSLDELSTEVVMAERYF
AKEAVGGSSEFEHLGKVAWHPDGKSLSVTGAADPLMLMRDSWERSIIVPE
DAEDGGHTKEITIAAFSPDGGRHLATAALDGRVVVWDVEEKLAVKTFVNT
DQENWRHLK
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mRNA from alignment at E_fasciculatus_S2_contig7755:540..4963-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7755.15922.1 ID=mRNA_E_fasciculatus_S2_contig7755.15922.1|Name=mRNA_E_fasciculatus_S2_contig7755.15922.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4424bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7755:540..4963- (Ectocarpus fasciculatus EfasUO2)
ATGGCCGAGCCCGAGGGAGTGAAGGCATGGTTTGCTTGCGGGCCGGGCAT GTGCGACATGGATGCAGCCACGACAAGCGATGGCTTGAGGATATTCGCCG GTGGGGCGGAAGGCATGGTCAAGGTGGGAACAAAGCCTGGTGGTGGCGAG GCGCTCTGCGATTATCTTTCTATCTCTGTTGGTAACCATGTGCACCAACA GGGCAATTTTTGAAATCTCAAGCACCAGAGTGCCCCCCGCGCCGCGCGGT AAGAGGTGTGTGTGGCATGCGGTTCCTTGCAGATTAGCTGACCATCGTCA TTTTCGAGGACATGGCGGTGACTGGTACGTTTTCCCACCTATAACCCCCC CCATGCTGCTCTCTTGATCGTTTGCAAAACAAACCCCTGCCGACTCTCTT CGTGCAATTTTCAAAAAAAAAAACTGAAAAAGCAACGCCAACCTTTCTGT CTGGAGGCGTTTGGTGAGACTACACTGCAGCTGTCCGGCGGTGCTGCTGT TAGGTTAGAGGTTAGGGGCTTGGCCCATAGCAACAGGATCCCCGAAAGCG TTTCCTTCGTTAGGCCAGAGGGTCTATCCCTTAGACCGAAGTAGTCAGCG CGCTGACAATTTGAGCTGGCACCTGTGGTCAACCTCTCCGAATCGATATC CGCATTCAGACTGGCACTGCTGAAAAGGCTTCGCCGCGCGTGCCGACTGC TGACTTCTGTAGTGACCCATCGACAAAGACGTCGGTGCACACATGCACAC ATACATACCTGCGTGTGGGGCGGGCTGGCCTCCTTGCGATGTCCGCGTTC ATCGCAATGGATTCTGGTCCTCCGTTTCGAAAACTGGTCTTCACTCTGAA GGATCGTCAGTCGCCAGCACATCCAAGATTGTACATAACACAGCGCGTCT ACACCGCCGTCACGTGCCGTAAGAGGCGGAGGGAGAGGCCGGAGAGATGG CACCCCCCCTAGACCGGCTTTCAAAGCTCTTATCGATTGCTCCATAACCA AGGGGGTGCATGGCTTACCGCACCGTATACCGTACCGTATACCGCAAGAG CCGGAGAGATGGCACCCCCCCTAGACCGGCTTTCAAAGCTCTTATAGATT GCTCCATAACCAAGGGAGCGCGGAAAGAGCCCGATACGTCGACGGAAAGA CTTGGACGATAATTTCCCACAACGAACATTCGTGGTGTTGGCACAAGCTT GAGCTTGGTCGTGGAGCAATCTATAAGAGCTTTGAAAGTCGCTCTACAGC AGTAGGGGGGGGGGTGCCATCTCTCCGCCTCTTGCGGTATACATTCCCGA AGAGAATGGTCTTCGAGACTTTCTGTGAGTTCTTTGTCTTCTACGATTGT AAGACGAAAACGACCGCTGCGGACGCCGGCGAACCAGTCAGTTCACATTA CTTCTTCCCCAAGCACGAAACACTATATGATGACACCCTGATTCTACGAA GACTCAACACAAATCTCCGGAGAATCTGGTAACACAACAAACAACGGCAA ACAACAGGTGTTCGACCCCAAGAGCTCGAGCATCCAGAACGCCGTCGCAG AGCTCAACCTCGACGACAAGGACGAGGGGGACGAGGGCTTCGCGGTCACG GCCGTGGCCGTCAGCCCTGCCGGCGACGAGCTGGCCGTGGGCCTCAGGAA CGGCGACGTCAAGCTGTACGGGCTTCCGAAGCTGGACTTCAAGTCGATGC TCACGAGGTTCACGGCCCCGGTGCTCGGCCTGGCCTACGGCATGAAGGAC GGCGACGTGATGTGAGCCTTGGTCCTGTCTTTGTTTTTGTTTTGTTTTGT GCCGAGCCGTATAAATGCATTGTTAGCAATTGTTGTTGTTGTTGTTGTTG TTGTTGTTGTTGTTCCTCACATTAGCTCTAGCCCACAAAAGATGGGGAGC CCGTGGTCTCAAAACCCGGCATACACGACCCCACGAAAGAAACAAAAAAA ATAGGGTACAATACCACTCGGAAGAGAAAACAAAATGATAGAAAGAAAGA CCAGCTACCGCACCAAACGAGAAAGAGCCTCGAGGAGACCGATCAAAATA AAATAATGTATGTAGCACACGGCCTTTGCTTGCTGACAACTGCGTTCATG ACACCTACGCGAGCCTCCAATGCCTCCCCCTTCCCCTACCACTCTGCAGT GCCGCGTGCAGCGAGGAGCCGGGAATCCGAGTTGTCAGGAGGAGCAACAA CAGCAAGGTTCTTACCCTCAAGGACATGGACGGGGGCGTGAAAAGCGTAG ACTGGGACCCTCGGGGGGACTTCCTTGCTGCCTCAGGTACTACATTCTAC AAGCGTTGCTTTCAGCTCCTTGCTGTTGTCTTTTGTACTTCCGTACAAGT ATATGGAAGTATACACAGTTTGATTTGGCCACTACAGCCTTGGTCACACA ACGTGCGATGTCCACCGTTGTTTGGGGGGCTTCTTTCCGGCCTATTTCTC CTCGCGTCCGTTCGATTCCCACTACACGTACATGAACTCCCAGTAGTGGC CTGTGCCCACGGAAGGCATCCGTGTCAGACCAGGGAAAGATAAATAAGCG GCCCTTAAGGTCAATTGAGGCAACCAACAACGTCGCATGGGCGACACAGC AAGCGACCGAGCAATGGAACTTGAGGAGGGTCGTGGGATGCACACATACT TCAAGCATCTCCCAGCCCCATCTCGTCGATCCCGGCATTCGTGCCCCCCC ACACAAGATGGTACGAACCATATGTATGTGTTTTTACTTTTTTTTTCCGC CCGTGGCATGGGATCGGCAGGCTTCGACGGGACTGTCAAGGTGTGGAGAG TCGACCCGTCCTTGGATGAGCTGAGCACGGAGGTGGTTATGGCGGAGAGG TACTTCGCCAAGGAGGCGGTGGGGGGATCGTCGGAGTTTGAGCACCTCGG CAAGGTGGCTTGGCACCCAGACGTGAGTACGGATGTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTAATGTAG TTGTTGTGGTTGTTGTTGTTGGTGGTGGTGGTTGTGCTGTGAGGAAACAG GGTTTTGACACTTTCCGGGTTGTGTGCTTGCATGATATCCGTCATATGTT TGTAGTAAACGACCCCGCAGGCATCCGCGTCGGTCCGTTCGACCGGCACG GATGTTAGAAGGTACCAGAGAACGGTTCTAACAATGCGAAAATCAATAAC TAATTCGACACCTGATCGCCCCTGTTTCCTTCTCCTGCTCTTGGTGTTAT TTTTTCTCCTGGAACGGTGTTTGTTCAGGGGAAAAGCTTGAGCGTCACCG GCGCCGCGGACCCCCTCATGCTCATGCGCGACTCGTGGGAACGGTGAGCA TCGCTTTTTTTGCCCTCGAGTTTGGTTTCGAACAGAAGCAGCTATTTCTA CTGTTCTTTTGGATGATATGTACTGGTGTTGTCGTTCAGGGCTGGTGGGA AAGGAACAGCCGTGACAGAATCAAACTAGTTTCTCTTTTGCGGGACGACC GGCTTGACAATTGAGCGGCAACATCAACACCACCACCACCACCAGTAGCA ACAACAATACCACCACTACCACCACCACCCCCACCACCACCACAATTAAC AACAACAACAACAACAACAACAACAACAACAACAACATGAACCAACGACT TACCTCACCCAAACGGGCGCGAACGACGGACAGGTCGATCATCGTCCCCG AGGACGCCGAGGACGGGGGACACACCAAGGAGATCACCATCGCAGCCTTC AGCCCGGACGGCGGGCGGCACCTCGCCACGGCCGCCCTCGACGGGTACGG GAAAACCAAACATCAGCAGCCAGTTGTGCCGCTTTTGTGCAAAGTATCCT TCGGGGTGTTTTGTTTTGTGCCTGTTCGGGGCAAAAGTCCGAAAACCGAA GCAGTAGGAGTTGTGCCGCTTTTGTGTTGCGCTTCGGGGCGGCTCTTTGT GAACTGTTCCGGGGTAACAGTCAGAACACGGTAACTGGTGCCAATGTCTT CCGGATTGGCAACATCTGGTGTTTGTTGTTCCTGTGTTGTTGCCTTTGAT TTATTCGCGCGAATAAGCGGGTGTGTCAGCAGCCCGTTTTAGCTACCGGT TCTGCAGTTTTAGTAGGGGGGAGGGAGTGCGTCATGCCACAGTTAACGCC CTGCCATGGCCATGGGTGTAATGGTTCTCGAGGCCTTATGGCGGCAGCCC CCAACACCCAACCTAAGTTCGTCCTGGCTGACTGTAACGCATCGACAACC AAATGAGACCCCCCGGAGCCGTCACCGCCGCCTTTCTCAAACTGTTTTTC CGTCTGTTAATCCCGAATCCTTCATTGGATTTTGTCCAGCCGCGTGGTGG TGTGGGACGTGGAGGAGAAGCTTGCGGTGAAGACCTTCGTCAACACGGAC CAGGAGAACTGGCGACACCTCAAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7755:540..4963-

>mRNA_E_fasciculatus_S2_contig7755.15922.1 ID=mRNA_E_fasciculatus_S2_contig7755.15922.1|Name=mRNA_E_fasciculatus_S2_contig7755.15922.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=927bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7755:540..4963- (Ectocarpus fasciculatus EfasUO2)
ATGGCCGAGCCCGAGGGAGTGAAGGCATGGTTTGCTTGCGGGCCGGGCAT
GTGCGACATGGATGCAGCCACGACAAGCGATGGCTTGAGGATATTCGCCG
GTGGGGCGGAAGGCATGGTCAAGGTGTTCGACCCCAAGAGCTCGAGCATC
CAGAACGCCGTCGCAGAGCTCAACCTCGACGACAAGGACGAGGGGGACGA
GGGCTTCGCGGTCACGGCCGTGGCCGTCAGCCCTGCCGGCGACGAGCTGG
CCGTGGGCCTCAGGAACGGCGACGTCAAGCTGTACGGGCTTCCGAAGCTG
GACTTCAAGTCGATGCTCACGAGGTTCACGGCCCCGGTGCTCGGCCTGGC
CTACGGCATGAAGGACGGCGACGTGATTGCCGCGTGCAGCGAGGAGCCGG
GAATCCGAGTTGTCAGGAGGAGCAACAACAGCAAGGTTCTTACCCTCAAG
GACATGGACGGGGGCGTGAAAAGCGTAGACTGGGACCCTCGGGGGGACTT
CCTTGCTGCCTCAGGCTTCGACGGGACTGTCAAGGTGTGGAGAGTCGACC
CGTCCTTGGATGAGCTGAGCACGGAGGTGGTTATGGCGGAGAGGTACTTC
GCCAAGGAGGCGGTGGGGGGATCGTCGGAGTTTGAGCACCTCGGCAAGGT
GGCTTGGCACCCAGACGGGAAAAGCTTGAGCGTCACCGGCGCCGCGGACC
CCCTCATGCTCATGCGCGACTCGTGGGAACGGTCGATCATCGTCCCCGAG
GACGCCGAGGACGGGGGACACACCAAGGAGATCACCATCGCAGCCTTCAG
CCCGGACGGCGGGCGGCACCTCGCCACGGCCGCCCTCGACGGCCGCGTGG
TGGTGTGGGACGTGGAGGAGAAGCTTGCGGTGAAGACCTTCGTCAACACG
GACCAGGAGAACTGGCGACACCTCAAG
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