mRNA_E_fasciculatus_S2_contig774.15906.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y9_ECTSI) HSP 1 Score: 626 bits (1615), Expect = 1.630e-219 Identity = 357/400 (89.25%), Postives = 376/400 (94.00%), Query Frame = 1
Query: 1 NQQAPLEAGEDGTFDVGDASPPPSPPKRVGVARSTQNETATAMPTAPAAESDPCGSPPIKDDWERVDLDGADEGLPPPSGSASQGEEAGAPPSVPEYSQEDFQDAVETQDESATQQTGTGAATTKTVKDGSSCCVNDSPGKACGQAAPVEKSPATPPPCAVVKQRPPGVGGRVNVIASGLANVRLPMGYDRQLRQKEEEDCLVDSDGEEQFHDAQESGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
N++APLEAGEDGTFDVGDASPPPSPPKRVG AR TQN TAT + TAPA + DPCGSPPIKDDWE+VDLDGADEGLPPP+G+ASQG EAGAPPS PEY+QEDFQDAVETQDESATQQ GTGA TT+ DG+SCCV+DSPGKACGQAA VE S A PP AVV+QRPPG+GGRVNVIASGLANVRLPMGY RQ+RQ +EED LVDSDGEEQFHDAQ+SGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDE HKKDRAVFLANRAQGHLRLEEY+TVV+DCTAALELDP+YVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER
Sbjct: 6 NEEAPLEAGEDGTFDVGDASPPPSPPKRVGSARRTQNATATTVSTAPATDGDPCGSPPIKDDWEKVDLDGADEGLPPPAGNASQGREAGAPPSAPEYAQEDFQDAVETQDESATQQAGTGATTTE---DGTSCCVDDSPGKACGQAARVESSAAAPP-HAVVEQRPPGLGGRVNVIASGLANVRLPMGYGRQMRQ-DEEDGLVDSDGEEQFHDAQDSGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 400
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX5_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.150e-40 Identity = 106/187 (56.68%), Postives = 141/187 (75.40%), Query Frame = 1
Query: 661 VVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXS------LRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGS-YSINFER 1200
+ KDA KA+EMKE GN +Y ++ DA D YT+AL +CP+DEG ++++AV+ +NRA HLRLE++ VV+DCT AL + P YVKALLR XXXXXXXXXXXXXXXXXXXXXX ++ A + RL+KLH +K E++K+EA+GKLK+LGN+LLG+FGLS DNFK+ QD + G Y+I+F +
Sbjct: 1 MTKDAAKAKEMKEQGNTYYLAKQYLDAADCYTLALEFCPDDEGERENKAVYFSNRAACHLRLEDFQQVVNDCTEALTIKPKYVKALLRRXXXXXXXXXXXXXXXXXXXXXXAPPEEAPPKVVQKALTDIDRLQKLHEEKMEQLKDEALGKLKELGNSLLGHFGLSLDNFKVNQDASGGGGYNISFNK 187
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Tetratricopeptide (repeat protein 1-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J422_9EUKA) HSP 1 Score: 143 bits (361), Expect = 1.270e-35 Identity = 83/171 (48.54%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 682 AREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINF 1194
AR KE GN H+K E++ A+D YT A+ P DE +RAVF ANRA +++E++ VVDDCTAALEL P Y KAL+R S + +V RLEK +K EK KEE +GKLKDLGN++LG FGLS DNFK +DPNTGSYSI+F
Sbjct: 42 ARAHKERGNVHFKAQEWDAAIDCYTHAIEVMPPDE---PERAVFFANRAAAFAKIDEHEGVVDDCTAALELQPQYTKALVRRALAREALDQPTEALEDAKTAAALDPSDKGLVAAVSRLEKASAEKLEKQKEEMLGKLKDLGNSVLGKFGLSLDNFKAVKDPNTGSYSISF 209
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7C7_BRELC) HSP 1 Score: 144 bits (362), Expect = 2.860e-35 Identity = 83/198 (41.92%), Postives = 111/198 (56.06%), Query Frame = 1
Query: 631 FHDAQESGP--------GVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
+ DA E+ P G + KA KE GN+ + G + DA++ YT AL CP +E + +RAV+ +NRA LRL + +DDCT A+ L PTYVKALLR ++ A +S RL+K+ +++ EKMK E + KLK GN +LG FGLSTDNFKM QDP TGSY+INFE+
Sbjct: 51 YDDASENAPEEEKGDSKGKTETVKKASSAKELGNKFFTRGSYLDAIECYTTALKLCPSEEEYAYNRAVYFSNRAACLLRLGRTEESIDDCTQAVTLSPTYVKALLRRAEAYEKLDKLEEALADFDAVLKIDPTVPAAVKSHERLQKIVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFKMVQDPATGSYNINFEQ 248
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEF4_9STRA) HSP 1 Score: 143 bits (361), Expect = 3.730e-35 Identity = 73/175 (41.71%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 667 KDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSIN 1191
K+ +KA E KE GN +++N E++DA++ Y+ A+ +CPEDE +K++ A F NR+ + +EE++ VV+DCTAAL L YVK + R + + + RL+ ++DK KMK+EA+GKLK+LGN++LGNFG+S DNFKM QDP TGS++I+
Sbjct: 73 KNLSKALEAKEEGNNYFRNKEYDDALEAYSKAITFCPEDEENKENLATFYGNRSAAYFAVEEFELVVEDCTAALALKADYVKVIARRMLANEKLEKYEEALTDAKLVQDNDPNYPKIADKIRRLQIAYDDKMTKMKDEALGKLKELGNSILGNFGMSLDNFKMNQDPATGSWNIS 247
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C6_9STRA) HSP 1 Score: 143 bits (360), Expect = 3.800e-35 Identity = 98/180 (54.44%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 661 VVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
V+++A A ++KE GNE YK+ + +A+D Y+ AL Y PE++ + RAV+L+NRA L L Y+ V++DCT ALE DP YVKALLR XXXXXXXXXXXXXXXXXXXX A + RL+ + K+E++K+E +GKLKDLGN +LG FG+S DNFK QDP TGSYSI+F++
Sbjct: 60 VIRNAETAAKLKEQGNEEYKSKNYLNAIDIYSDALEYVPEEKLYDSARAVYLSNRAACFLALGHYEDVIEDCTDALENDPRYVKALLRRAQAHEXXXXXXXXXXXXXXXXXXXXXXXXAVQEQRRLDAIVKKKHEELKDEMMGKLKDLGNTVLGKFGMSLDNFKTVQDPQTGSYSISFQQ 239
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Mitochondrial (Protein Translocase (MPT) Family n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MSR9_PHYIT) HSP 1 Score: 143 bits (361), Expect = 4.730e-35 Identity = 85/200 (42.50%), Postives = 113/200 (56.50%), Query Frame = 1
Query: 607 VDSDGEEQFHDAQESGPGVVK--DATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
V SD E A+E K + +A KE GN+ + G + DA++ YT AL CP DE + +RAV+ +NRA +RL D VDDCT A+ L PTYVKALLR ++R A +S RL+K+ +++ EKMK E + KLK GN +LG FGLSTDNF+M QDP TGSYS+NF++
Sbjct: 52 VKSDKEVDASQAEEKNASQDKTENVKRASGAKELGNKFFSRGSYLDAIECYTTALKLCPADEEYAYNRAVYFSNRAACLMRLGRTDESVDDCTQAVTLSPTYVKALLRRAEAFEKLDKLEEALADYDAVLKIDPTVRTAVKSHERLQKIVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFQMVQDPATGSYSVNFQQ 251
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J1B8_9EUKA) HSP 1 Score: 142 bits (358), Expect = 5.760e-35 Identity = 74/173 (42.77%), Postives = 106/173 (61.27%), Query Frame = 1
Query: 682 AREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
AR KE GN H+ GE++DA++ Y+ A+ P D +RAVF ANRA + ++ EY+ V++DCT+AL + P YVKAL+R + A ++PRLE N K EK K+E +GKLKDLGN++LG FG+S DNFK ++DP+TGSY+I+F++
Sbjct: 62 ARTAKEQGNLHFGKGEWDDAIECYSEAIEVAPADS---PERAVFFANRAACYSKIHEYEAVIEDCTSALAIKPEYVKALVRRAQAREELDQPTEALEDMRTAGKLDPDAKAATSAIPRLEAASNAKLEKQKDEMLGKLKDLGNSVLGRFGMSLDNFKAEKDPSTGSYNISFQQ 231
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: tetratricopeptide (repeat protein 1-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04FC2B) HSP 1 Score: 140 bits (354), Expect = 8.330e-35 Identity = 75/173 (43.35%), Postives = 107/173 (61.85%), Query Frame = 1
Query: 682 AREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
A E+K+ GN+H++ E+ +A D YT A+ YCP++E +++++F ANRA +LE+Y+ + DC ALEL P Y+KA LR + LA E++ RL K+EK+K+E IGKLKDLGN +L FGLSTDNFK++QDPN+G YSINF++
Sbjct: 29 ALELKKKGNDHFRRQEYTEAQDLYTKAIKYCPKEE--TENKSIFYANRAACCQKLEDYENGISDCDRALELSPNYLKARLRRAQCYEKVDKLEEALEDYRIVFENDKTCHLAHEAILRLPDEIKIKHEKLKDEMIGKLKDLGNMVLRPFGLSTDNFKLQQDPNSGGYSINFQK 199
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z077_PHYSP) HSP 1 Score: 141 bits (356), Expect = 2.690e-34 Identity = 78/177 (44.07%), Postives = 104/177 (58.76%), Query Frame = 1
Query: 670 DATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
D +A KE GN+ + G F DA++ YT AL CP ++ + +RAV+ +NRA LRL + VDDCT A+ L PTYVKALLR ++R A + RL+K+ +++ EKMK E + KLK GN +LG FGLSTDNF+M QDP TGSYSINF++
Sbjct: 82 DVKRASAAKELGNKFFSRGSFLDAIECYTTALKLCPAEDEYAYNRAVYFSNRAACLLRLGRTEESVDDCTQAVTLSPTYVKALLRRAEALEKLDKLEEALADYDAVLKIDPTMRTAVKGHERLQKIVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFQMVQDPATGSYSINFQQ 258 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig774.15906.1 >prot_E_fasciculatus_S2_contig774.15906.1 ID=prot_E_fasciculatus_S2_contig774.15906.1|Name=mRNA_E_fasciculatus_S2_contig774.15906.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=359bp MPTAPAAESDPCGSPPIKDDWERVDLDGADEGLPPPSGSASQGEEAGAPPback to top mRNA from alignment at E_fasciculatus_S2_contig774:16285..19610- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig774.15906.1 ID=mRNA_E_fasciculatus_S2_contig774.15906.1|Name=mRNA_E_fasciculatus_S2_contig774.15906.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3326bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig774:16285..19610- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig774:16285..19610- >mRNA_E_fasciculatus_S2_contig774.15906.1 ID=mRNA_E_fasciculatus_S2_contig774.15906.1|Name=mRNA_E_fasciculatus_S2_contig774.15906.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1077bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig774:16285..19610- (Ectocarpus fasciculatus EfasUO2)back to top |