mRNA_E_fasciculatus_S2_contig774.15906.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig774.15906.1
Unique NamemRNA_E_fasciculatus_S2_contig774.15906.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y9_ECTSI)

HSP 1 Score: 626 bits (1615), Expect = 1.630e-219
Identity = 357/400 (89.25%), Postives = 376/400 (94.00%), Query Frame = 1
Query:    1 NQQAPLEAGEDGTFDVGDASPPPSPPKRVGVARSTQNETATAMPTAPAAESDPCGSPPIKDDWERVDLDGADEGLPPPSGSASQGEEAGAPPSVPEYSQEDFQDAVETQDESATQQTGTGAATTKTVKDGSSCCVNDSPGKACGQAAPVEKSPATPPPCAVVKQRPPGVGGRVNVIASGLANVRLPMGYDRQLRQKEEEDCLVDSDGEEQFHDAQESGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
            N++APLEAGEDGTFDVGDASPPPSPPKRVG AR TQN TAT + TAPA + DPCGSPPIKDDWE+VDLDGADEGLPPP+G+ASQG EAGAPPS PEY+QEDFQDAVETQDESATQQ GTGA TT+   DG+SCCV+DSPGKACGQAA VE S A PP  AVV+QRPPG+GGRVNVIASGLANVRLPMGY RQ+RQ +EED LVDSDGEEQFHDAQ+SGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDE HKKDRAVFLANRAQGHLRLEEY+TVV+DCTAALELDP+YVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER
Sbjct:    6 NEEAPLEAGEDGTFDVGDASPPPSPPKRVGSARRTQNATATTVSTAPATDGDPCGSPPIKDDWEKVDLDGADEGLPPPAGNASQGREAGAPPSAPEYAQEDFQDAVETQDESATQQAGTGATTTE---DGTSCCVDDSPGKACGQAARVESSAAAPP-HAVVEQRPPGLGGRVNVIASGLANVRLPMGYGRQMRQ-DEEDGLVDSDGEEQFHDAQDSGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 400          
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX5_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.150e-40
Identity = 106/187 (56.68%), Postives = 141/187 (75.40%), Query Frame = 1
Query:  661 VVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXS------LRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGS-YSINFER 1200
            + KDA KA+EMKE GN +Y   ++ DA D YT+AL +CP+DEG ++++AV+ +NRA  HLRLE++  VV+DCT AL + P YVKALLR XXXXXXXXXXXXXXXXXXXXXX          ++ A   + RL+KLH +K E++K+EA+GKLK+LGN+LLG+FGLS DNFK+ QD + G  Y+I+F +
Sbjct:    1 MTKDAAKAKEMKEQGNTYYLAKQYLDAADCYTLALEFCPDDEGERENKAVYFSNRAACHLRLEDFQQVVNDCTEALTIKPKYVKALLRRXXXXXXXXXXXXXXXXXXXXXXAPPEEAPPKVVQKALTDIDRLQKLHEEKMEQLKDEALGKLKELGNSLLGHFGLSLDNFKVNQDASGGGGYNISFNK 187          
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Tetratricopeptide (repeat protein 1-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J422_9EUKA)

HSP 1 Score: 143 bits (361), Expect = 1.270e-35
Identity = 83/171 (48.54%), Postives = 103/171 (60.23%), Query Frame = 1
Query:  682 AREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINF 1194
            AR  KE GN H+K  E++ A+D YT A+   P DE    +RAVF ANRA    +++E++ VVDDCTAALEL P Y KAL+R                          S +    +V RLEK   +K EK KEE +GKLKDLGN++LG FGLS DNFK  +DPNTGSYSI+F
Sbjct:   42 ARAHKERGNVHFKAQEWDAAIDCYTHAIEVMPPDE---PERAVFFANRAAAFAKIDEHEGVVDDCTAALELQPQYTKALVRRALAREALDQPTEALEDAKTAAALDPSDKGLVAAVSRLEKASAEKLEKQKEEMLGKLKDLGNSVLGKFGLSLDNFKAVKDPNTGSYSISF 209          
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Uncharacterized (protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7C7_BRELC)

HSP 1 Score: 144 bits (362), Expect = 2.860e-35
Identity = 83/198 (41.92%), Postives = 111/198 (56.06%), Query Frame = 1
Query:  631 FHDAQESGP--------GVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
            + DA E+ P        G  +   KA   KE GN+ +  G + DA++ YT AL  CP +E +  +RAV+ +NRA   LRL   +  +DDCT A+ L PTYVKALLR                          ++  A +S  RL+K+ +++ EKMK E + KLK  GN +LG FGLSTDNFKM QDP TGSY+INFE+
Sbjct:   51 YDDASENAPEEEKGDSKGKTETVKKASSAKELGNKFFTRGSYLDAIECYTTALKLCPSEEEYAYNRAVYFSNRAACLLRLGRTEESIDDCTQAVTLSPTYVKALLRRAEAYEKLDKLEEALADFDAVLKIDPTVPAAVKSHERLQKIVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFKMVQDPATGSYNINFEQ 248          
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEF4_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.730e-35
Identity = 73/175 (41.71%), Postives = 110/175 (62.86%), Query Frame = 1
Query:  667 KDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSIN 1191
            K+ +KA E KE GN +++N E++DA++ Y+ A+ +CPEDE +K++ A F  NR+  +  +EE++ VV+DCTAAL L   YVK + R                          +     + + RL+  ++DK  KMK+EA+GKLK+LGN++LGNFG+S DNFKM QDP TGS++I+
Sbjct:   73 KNLSKALEAKEEGNNYFRNKEYDDALEAYSKAITFCPEDEENKENLATFYGNRSAAYFAVEEFELVVEDCTAALALKADYVKVIARRMLANEKLEKYEEALTDAKLVQDNDPNYPKIADKIRRLQIAYDDKMTKMKDEALGKLKELGNSILGNFGMSLDNFKMNQDPATGSWNIS 247          
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C6_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.800e-35
Identity = 98/180 (54.44%), Postives = 129/180 (71.67%), Query Frame = 1
Query:  661 VVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
            V+++A  A ++KE GNE YK+  + +A+D Y+ AL Y PE++ +   RAV+L+NRA   L L  Y+ V++DCT ALE DP YVKALLR      XXXXXXXXXXXXXXXXXXXX    A +   RL+ +   K+E++K+E +GKLKDLGN +LG FG+S DNFK  QDP TGSYSI+F++
Sbjct:   60 VIRNAETAAKLKEQGNEEYKSKNYLNAIDIYSDALEYVPEEKLYDSARAVYLSNRAACFLALGHYEDVIEDCTDALENDPRYVKALLRRAQAHEXXXXXXXXXXXXXXXXXXXXXXXXAVQEQRRLDAIVKKKHEELKDEMMGKLKDLGNTVLGKFGMSLDNFKTVQDPQTGSYSISFQQ 239          
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Mitochondrial (Protein Translocase (MPT) Family n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MSR9_PHYIT)

HSP 1 Score: 143 bits (361), Expect = 4.730e-35
Identity = 85/200 (42.50%), Postives = 113/200 (56.50%), Query Frame = 1
Query:  607 VDSDGEEQFHDAQESGPGVVK--DATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
            V SD E     A+E      K  +  +A   KE GN+ +  G + DA++ YT AL  CP DE +  +RAV+ +NRA   +RL   D  VDDCT A+ L PTYVKALLR                          ++R A +S  RL+K+ +++ EKMK E + KLK  GN +LG FGLSTDNF+M QDP TGSYS+NF++
Sbjct:   52 VKSDKEVDASQAEEKNASQDKTENVKRASGAKELGNKFFSRGSYLDAIECYTTALKLCPADEEYAYNRAVYFSNRAACLMRLGRTDESVDDCTQAVTLSPTYVKALLRRAEAFEKLDKLEEALADYDAVLKIDPTVRTAVKSHERLQKIVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFQMVQDPATGSYSVNFQQ 251          
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J1B8_9EUKA)

HSP 1 Score: 142 bits (358), Expect = 5.760e-35
Identity = 74/173 (42.77%), Postives = 106/173 (61.27%), Query Frame = 1
Query:  682 AREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
            AR  KE GN H+  GE++DA++ Y+ A+   P D     +RAVF ANRA  + ++ EY+ V++DCT+AL + P YVKAL+R                            + A  ++PRLE   N K EK K+E +GKLKDLGN++LG FG+S DNFK ++DP+TGSY+I+F++
Sbjct:   62 ARTAKEQGNLHFGKGEWDDAIECYSEAIEVAPADS---PERAVFFANRAACYSKIHEYEAVIEDCTSALAIKPEYVKALVRRAQAREELDQPTEALEDMRTAGKLDPDAKAATSAIPRLEAASNAKLEKQKDEMLGKLKDLGNSVLGRFGMSLDNFKAEKDPSTGSYNISFQQ 231          
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: tetratricopeptide (repeat protein 1-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04FC2B)

HSP 1 Score: 140 bits (354), Expect = 8.330e-35
Identity = 75/173 (43.35%), Postives = 107/173 (61.85%), Query Frame = 1
Query:  682 AREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
            A E+K+ GN+H++  E+ +A D YT A+ YCP++E   +++++F ANRA    +LE+Y+  + DC  ALEL P Y+KA LR                          +  LA E++ RL      K+EK+K+E IGKLKDLGN +L  FGLSTDNFK++QDPN+G YSINF++
Sbjct:   29 ALELKKKGNDHFRRQEYTEAQDLYTKAIKYCPKEE--TENKSIFYANRAACCQKLEDYENGISDCDRALELSPNYLKARLRRAQCYEKVDKLEEALEDYRIVFENDKTCHLAHEAILRLPDEIKIKHEKLKDEMIGKLKDLGNMVLRPFGLSTDNFKLQQDPNSGGYSINFQK 199          
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z077_PHYSP)

HSP 1 Score: 141 bits (356), Expect = 2.690e-34
Identity = 78/177 (44.07%), Postives = 104/177 (58.76%), Query Frame = 1
Query:  670 DATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDCTAALELDPTYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1200
            D  +A   KE GN+ +  G F DA++ YT AL  CP ++ +  +RAV+ +NRA   LRL   +  VDDCT A+ L PTYVKALLR                          ++R A +   RL+K+ +++ EKMK E + KLK  GN +LG FGLSTDNF+M QDP TGSYSINF++
Sbjct:   82 DVKRASAAKELGNKFFSRGSFLDAIECYTTALKLCPAEDEYAYNRAVYFSNRAACLLRLGRTEESVDDCTQAVTLSPTYVKALLRRAEALEKLDKLEEALADYDAVLKIDPTMRTAVKGHERLQKIVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFQMVQDPATGSYSINFQQ 258          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig774.15906.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.630e-21989.25protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y9... [more]
Uncharacterized1.150e-4056.68protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Tetratricopeptide1.270e-3548.54repeat protein 1-like protein n=1 Tax=Chrysochromu... [more]
Uncharacterized2.860e-3541.92protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A... [more]
Hypothetical3.730e-3541.71protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Hypothetical3.800e-3554.44protein n=1 Tax=labyrinthulid quahog parasite QPX ... [more]
Mitochondrial4.730e-3542.50Protein Translocase (MPT) Family n=3 Tax=Phytophth... [more]
Hypothetical5.760e-3542.77protein n=1 Tax=Calcidiscus leptoporus TaxID=12754... [more]
tetratricopeptide8.330e-3543.35repeat protein 1-like n=1 Tax=Xenia sp. Carnegie-2... [more]
Uncharacterized2.690e-3444.07protein (Fragment) n=1 Tax=Phytophthora sojae (str... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig774contigE_fasciculatus_S2_contig774:16285..19610 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score562.4
Seed ortholog evalue1.5e-157
Seed eggNOG ortholog2880.D7G6Y9
Preferred nameTTC1
Model size2012
KEGG koko:K04136,ko:K07562
KEGG Pathwayko03008,ko03013,ko04020,ko04022,ko04080,ko04261,ko04270,ko04970,map03008,map03013,map04020,map04022,map04080,map04261,map04270,map04970
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000209,GO:0001664,GO:0001666,GO:0002931,GO:0003674,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005783,GO:0005829,GO:0006457,GO:0006464,GO:0006508,GO:0006511,GO:0006515,GO:0006605,GO:0006626,GO:0006807,GO:0006810,GO:0006839,GO:0006886,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010498,GO:0010604,GO:0010646,GO:0010648,GO:0010817,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016234,GO:0016567,GO:0016740,GO:0017015,GO:0019216,GO:0019218,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019900,GO:0019904,GO:0019941,GO:0023051,GO:0023052,GO:0023057,GO:0030016,GO:0030017,GO:0030018,GO:0030162,GO:0030163,GO:0030433,GO:0030512,GO:0030544,GO:0030579,GO:0030674,GO:0030911,GO:0030968,GO:0031072,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031334,GO:0031371,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031625,GO:0031647,GO:0031674,GO:0031943,GO:0031974,GO:0031981,GO:0032091,GO:0032268,GO:0032270,GO:0032350,GO:0032434,GO:0032436,GO:0032446,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034450,GO:0034605,GO:0034613,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036293,GO:0036294,GO:0036503,GO:0042176,GO:0042221,GO:0042405,GO:0042802,GO:0042803,GO:0042886,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043292,GO:0043393,GO:0043412,GO:0043632,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045184,GO:0045732,GO:0045862,GO:0046332,GO:0046907,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051082,GO:0051087,GO:0051098,GO:0051100,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051603,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0051787,GO:0051788,GO:0051865,GO:0051879,GO:0060090,GO:0060255,GO:0061136,GO:0061630,GO:0061659,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070534,GO:0070585,GO:0070647,GO:0070727,GO:0070887,GO:0071218,GO:0071310,GO:0071453,GO:0071456,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072655,GO:0080090,GO:0090034,GO:0090035,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0099080,GO:0099081,GO:0099512,GO:0101031,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1902494,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903844,GO:1903845,GO:1990234,GO:2000058,GO:2000060
Exons5
EggNOG free text desc.protein binding, bridging
EggNOG OGsKOG4234@1,KOG4234@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-01_011720.1
Cds size1077
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko04030
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig774.15906.1prot_E_fasciculatus_S2_contig774.15906.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig774 17094..19484 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842436.0655499-UTR-E_fasciculatus_S2_contig774:16284..170931696842436.0655499-UTR-E_fasciculatus_S2_contig774:16284..17093Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig774 16285..17093 -
1696842436.16681-UTR-E_fasciculatus_S2_contig774:19484..196101696842436.16681-UTR-E_fasciculatus_S2_contig774:19484..19610Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig774 19485..19610 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842436.0884132-CDS-E_fasciculatus_S2_contig774:17093..172091696842436.0884132-CDS-E_fasciculatus_S2_contig774:17093..17209Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig774 17094..17209 -
1696842436.1043274-CDS-E_fasciculatus_S2_contig774:17680..177941696842436.1043274-CDS-E_fasciculatus_S2_contig774:17680..17794Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig774 17681..17794 -
1696842436.1225855-CDS-E_fasciculatus_S2_contig774:18005..181261696842436.1225855-CDS-E_fasciculatus_S2_contig774:18005..18126Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig774 18006..18126 -
1696842436.1416893-CDS-E_fasciculatus_S2_contig774:18406..185481696842436.1416893-CDS-E_fasciculatus_S2_contig774:18406..18548Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig774 18407..18548 -
1696842436.1570318-CDS-E_fasciculatus_S2_contig774:18900..194841696842436.1570318-CDS-E_fasciculatus_S2_contig774:18900..19484Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig774 18901..19484 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig774.15906.1

>prot_E_fasciculatus_S2_contig774.15906.1 ID=prot_E_fasciculatus_S2_contig774.15906.1|Name=mRNA_E_fasciculatus_S2_contig774.15906.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=359bp
MPTAPAAESDPCGSPPIKDDWERVDLDGADEGLPPPSGSASQGEEAGAPP
SVPEYSQEDFQDAVETQDESATQQTGTGAATTKTVKDGSSCCVNDSPGKA
CGQAAPVEKSPATPPPCAVVKQRPPGVGGRVNVIASGLANVRLPMGYDRQ
LRQKEEEDCLVDSDGEEQFHDAQESGPGVVKDATKAREMKEAGNEHYKNG
EFEDAVDYYTMALHYCPEDEGHKKDRAVFLANRAQGHLRLEEYDTVVDDC
TAALELDPTYVKALLRRAQANEHLEKYDMALEDAKELLKLDPSLRLAKES
VPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTG
SYSINFER*
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mRNA from alignment at E_fasciculatus_S2_contig774:16285..19610-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig774.15906.1 ID=mRNA_E_fasciculatus_S2_contig774.15906.1|Name=mRNA_E_fasciculatus_S2_contig774.15906.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3326bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig774:16285..19610- (Ectocarpus fasciculatus EfasUO2)
AACCAGCAGGCACCACTGGAGGCCGGGGAGGACGGCACGTTTGACGTCGG AGACGCTTCGCCGCCCCCGTCGCCACCCAAACGCGTTGGAGTTGCCCGTA GTACCCAAAACGAGACTGCTACTGCCATGCCTACAGCCCCGGCAGCCGAA AGCGACCCTTGCGGCTCGCCACCAATAAAAGACGACTGGGAAAGAGTGGA CCTAGACGGGGCCGACGAGGGATTGCCGCCTCCTTCAGGCAGCGCTAGCC AGGGGGAAGAAGCAGGAGCGCCACCGTCGGTACCGGAATACTCACAGGAA GACTTTCAAGACGCGGTCGAAACGCAAGACGAAAGCGCCACCCAACAGAC CGGAACCGGAGCCGCAACGACAAAAACGGTGAAAGACGGCAGCAGCTGTT GTGTAAACGATTCCCCGGGCAAGGCTTGCGGGCAAGCAGCGCCCGTCGAA AAAAGTCCCGCTACCCCACCACCGTGTGCTGTTGTGAAACAGCGGCCACC GGGCGTGGGTGGGAGGGTGAACGTGATCGCTTCGGGGCTGGCCAACGTGC GACTACCGATGGGATACGACAGACAATTGCGGCAAAAGGAGGAGGAGGAT TGTCTGGTAGACAGCGATGGGGAAGAGCAGTTCCACGATGCTCAGGAGAG TGGCCCTGGCGTGGTGAAGGACGCAACCAAGGCCCGAGAGATGAAGGAGG CGGGCAACGAGTGAGGAGACGTTTCCGTTTGTCGTAGAACTTGGGATTGA AAGCGTTGCTCGGGGGACGTGTGTACATTGTGAAGCGTGTCCCTGAAGCA GTGAAAGGGGCGTGGCCACACTTTGGTCCCTGCGTGCGTTCCGCCGCCTT GGAGACGTTTTTGAGCAATCGCTTCATTTTGCGGCTTCCTGGTCAGAACC GTCTTCTGTTTTCACAACCGAAACCTGAGCAAAGCTGCAGTGAACCCGGC TAGCGGACAGTCAACCGAGACCTGCCTTGCACAAAGAACCGAACCAATCA TATCCCCATCGCTTGCTCGCGCCGCGCGGCGGCGGTTGCTTGTCACGAAC CGGCAATACCAGACACTACAAGAACGGAGAGTTCGAAGACGCGGTGGACT ACTACACCATGGCGCTCCACTACTGTCCGGAGGACGAGGGGCACAAGAAG GACCGGGCTGTGTTCCTCGCTAACCGCGCTCAAGGCCACCTCCGATTGGA AGAGGTGGGTTCGGCTGCTGTACGTCGTGAACGATGTTGCGTGTCTACAC ACTTACTGCTCAAAGTCGGTGTGGTCCGTGAAGCTATACCCTGAAACTTT GCCATTTGATGGCCAGTAGCGCTAGACTCGATTGGGTTTGTTGGACAGCT GTTTCGGCAGGTTTTCATCGTATCTACCCGTTGCTCGATGATGCATTGGC TAACGTTTTGCCTCGATCATACTCGCTCCTTTTCGTTTGTCCGGATCCCT GTTCAACACTCCGTCTTTCGTCTTGTTGTGTCAGTACGACACGGTGGTGG ATGACTGCACGGCTGCGTTAGAGCTCGATCCAACCTACGTGAAGGCGCTC TTGCGACGAGCGCAAGCCAATGAGCACCTCGAGAAGTACGACATGGCACT GGAAGGTGCGAATGTCCGATTCTCTATCCGACCGGTATGGGTGGTTCCGG AACTCGGACCTCCCAAATGTTGGTATACAACACTTTGGTTGCATCGACAG CGAAGACTCCAACACCTATTGTAGGCACGAATATTCGACCCTCTTCTTGC TAATCTGCAGCATGCTTGGCAGGCGATTAAAATTTCTCGTTGGTCTGTTT TTTTTCTTCGTAACAGACGCGAAGGAGTTGCTAAAGCTTGATCCGAGTCT CCGGTTGGCGAAGGAAAGCGTGCCGCGGCTGGAGAAGCTTCACAACGACA AAAACGAAAAAATGAAAGAAGAAGCAATCGGTGAGTCTTTCTCCGTAAAT TCACGGATCGTGTCTTCGCGAACCACAAACGACTAGGGCTCTGGCGTGCG GCTTGGTGGAAAATTCGCTTGCGGGCCCTCGTGCACTTAATGATGGGAAG AGTACCAAGGTTTAGCTAACTGCAACGGGTCGTCTCTTGACTAGATACTT GTTTCGAATCTACATACATGTATGTAGAACCTTTTGATGAAGGTCGAGCC ATCCGCCGGTTATTCCGGGAACATGCAACTGGTATAGGCCCTCAATAGGC TTTGAATCGGACATGCTCGTTCGTTCGTTCAAGTTTGTTTCGCTTGGCCT GCTTCGGGCAAGATCGTTTTTGGTTGCTCCGTACCTGTCGCTGTGACGAA TCGTACCTGGAATATCTCTCACGGCGTGTTGGAAGCAATGCCTATGGCAA GCTGTCCGCATTCACTTGTCATCTGCTGCTGCTATATGTTTTGATGCACA GGCAAGCTGAAAGACCTTGGCAATGCCCTTCTTGGGAACTTCGGCTTGAG CACGGACAACTTCAAGATGAAACAAGACCCAAACACGGGCTCCTACAGCA TCAACTTTGAGAGATGATTGCCAAGCAACCCCCTTTGCGTCGTCACGTAT TGCTTATCTGGCGGCACGAGTCCCACTTTCCAGCGTTGGTGTCTTCCTCT GTCATAGTATATCTTTTTGACAGTCGCAGCATACGATAGGTTTTGCCGTA TCGTCAGTCGACATCTTGTGCACGCGTGGTGTGTCGTTTGTGGGAAAGAT TTTTGAGCGTGCACCGGCCACAAATAACGCGTAGGCGCGTGCCGCTGTTG AAACACCAACGAGTCGAGGTTAAGCTTGAACGTCAAGAAAGTCTAGTGTA AAGTTTGGCCGTGCTTGTACGGTGCATGCTCGAAGCCGTTTTCGAGAGGA CGAGTTCGAGAGAATGAAATAAGGCACTTCGAAGCTGGACGCCGCAGCCG TGCCGTTCTTCAATGTAGCCAACTTCGGAGTAATGTGCTGTAGAGATGCT TGGTCGTTACATCTTTTGCGTACTCTGTCACACGCATTTTTGTATCCCAC CCCCCAAGTTCGGTGGACGTGCTGCTCGGCGATGGGTCTGGGCATTTTGA GACAAAAATCGAGTGTGGGGGTTCCACTGAGAGAGGAAGAATGAGGACTC TTCACCAAGACATGTGAAAAAAAACACGTGTTTTTTATTTCCCTCTGCTA GATATTATCCATGTAGCTGCCCTCTTTTGCCCGACGATGACACTGCGTGT GTGTAGCAATCCTGGCAAAGAATGGCACAAGATAAACACTGCACTGACGG ATAGCAGCGGTATCGCGGAGCAAAAGAGAACATTGCACCAGAAAAGACTT GCTGGTCACAGAGCACAGAGCAGAGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig774:16285..19610-

>mRNA_E_fasciculatus_S2_contig774.15906.1 ID=mRNA_E_fasciculatus_S2_contig774.15906.1|Name=mRNA_E_fasciculatus_S2_contig774.15906.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1077bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig774:16285..19610- (Ectocarpus fasciculatus EfasUO2)
ATGCCTACAGCCCCGGCAGCCGAAAGCGACCCTTGCGGCTCGCCACCAAT
AAAAGACGACTGGGAAAGAGTGGACCTAGACGGGGCCGACGAGGGATTGC
CGCCTCCTTCAGGCAGCGCTAGCCAGGGGGAAGAAGCAGGAGCGCCACCG
TCGGTACCGGAATACTCACAGGAAGACTTTCAAGACGCGGTCGAAACGCA
AGACGAAAGCGCCACCCAACAGACCGGAACCGGAGCCGCAACGACAAAAA
CGGTGAAAGACGGCAGCAGCTGTTGTGTAAACGATTCCCCGGGCAAGGCT
TGCGGGCAAGCAGCGCCCGTCGAAAAAAGTCCCGCTACCCCACCACCGTG
TGCTGTTGTGAAACAGCGGCCACCGGGCGTGGGTGGGAGGGTGAACGTGA
TCGCTTCGGGGCTGGCCAACGTGCGACTACCGATGGGATACGACAGACAA
TTGCGGCAAAAGGAGGAGGAGGATTGTCTGGTAGACAGCGATGGGGAAGA
GCAGTTCCACGATGCTCAGGAGAGTGGCCCTGGCGTGGTGAAGGACGCAA
CCAAGGCCCGAGAGATGAAGGAGGCGGGCAACGAACACTACAAGAACGGA
GAGTTCGAAGACGCGGTGGACTACTACACCATGGCGCTCCACTACTGTCC
GGAGGACGAGGGGCACAAGAAGGACCGGGCTGTGTTCCTCGCTAACCGCG
CTCAAGGCCACCTCCGATTGGAAGAGTACGACACGGTGGTGGATGACTGC
ACGGCTGCGTTAGAGCTCGATCCAACCTACGTGAAGGCGCTCTTGCGACG
AGCGCAAGCCAATGAGCACCTCGAGAAGTACGACATGGCACTGGAAGACG
CGAAGGAGTTGCTAAAGCTTGATCCGAGTCTCCGGTTGGCGAAGGAAAGC
GTGCCGCGGCTGGAGAAGCTTCACAACGACAAAAACGAAAAAATGAAAGA
AGAAGCAATCGGCAAGCTGAAAGACCTTGGCAATGCCCTTCTTGGGAACT
TCGGCTTGAGCACGGACAACTTCAAGATGAAACAAGACCCAAACACGGGC
TCCTACAGCATCAACTTTGAGAGATGA
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