mRNA_E_fasciculatus_S2_contig7721.15888.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Similar (to SET domain, bifurcated 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM06_ECTSI) HSP 1 Score: 495 bits (1274), Expect = 1.330e-154 Identity = 411/711 (57.81%), Postives = 419/711 (58.93%), Query Frame = 1
Query: 1 RVHSSHKFKCWICDDGPMEQLRRRIPGYEHNSKSILTSLIMQGPSCRGAGSGSAGKDSKPESRVGKGGVADGTGAKPXXXXXXXXXXXXXXXXXXXXSDRPLPPPCGRXXXXXXXXXXXPTGLCGGGAQQPAASRRRCPVSESGDESCPSEGFPDYDGGEDGTXXXXXXXXXXXXXXXXXXXXXGGSGVAPAVGRAPLAAAPPPGGPGKGATLLDVPYSPPRGRGTGWAGLEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGDXXSRGRRRGREGKRNTAGTEDGVFDWDRRHLINDLSRGLENVKIQVCNNEDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCTEGCRDPNLCACLRLRAGKAGSAYSANIAGSGXXXXXXXXXXXXXXXXGPGRRRFY-------NDDGLLLHLPDAIFECHSGCACNPRRCKNRVVSRGVHLPLQVFRCAEPGKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLDFATCAARQGQSGGXXXXXXXXXXXXXXXXXXNADPSNWGLRLPLTAPAAASASSPWRSGNITAASTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----EAFGDFGVSPNREALLEGFVGTTGCTSRERAAYFLRGAGGNLEVAVNHFFDAPDGAGDADD 2100
RVH SHKFKCWICDDGPMEQLRRRIPGYEHNSKS+LTSLIM XXXXXXXX RC ESGDESC SEGFPD DG XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G EDGVF WDRR LINDLSRGLENVKIQVCN EDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCT+GCRDPNLCACLRLRAGKAGS Y A+I G+GXXXXXXXXXXXXXXXX NDDGLLLHLPDAIFECH+GCACNPRRCKNRVVSRGVHLPLQVFRCAE GKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLDFA CAAR G SGG NAD SNWGLR PLTAP A++ XXXXXXXXXXXXXXXXX EAFGDF VSPNRE LLEGFVG TGC SRERAAYFLRGAGG+L VAVNHF DAPD ADD
Sbjct: 128 RVHCSHKFKCWICDDGPMEQLRRRIPGYEHNSKSVLTSLIMX---------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXRCRAFESGDESCASEGFPDLDGXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGS------------------AEDGVFQWDRRQLINDLSRGLENVKIQVCNEEDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCTDGCRDPNLCACLRLRAGKAGSVYLADIGGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDDGLLLHLPDAIFECHAGCACNPRRCKNRVVSRGVHLPLQVFRCAESGKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLDFAKCAARPGHSGGSSSKSSRRRSIAMTSSS-NADQSNWGLRFPLTAPTGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVSLKSPVRKKTRTSPSSPLAAAARTGAGARAGGGLSKDQEEAFGDFVVSPNREKLLEGFVGATGCMSRERAAYFLRGAGGDLAVAVNHFLDAPDKGPCADD 692
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K918_9PHAE) HSP 1 Score: 286 bits (732), Expect = 2.020e-80 Identity = 219/376 (58.24%), Postives = 235/376 (62.50%), Query Frame = 2
Query: 2147 WVRRHNQRERMMYLRQQQEVDAEQHVPRNGSGYDVAALSPAPPLPCAEAKQAGXXXXXXXXXXXXXXXXXXXXXXXXXXEVLWQEVGDDFXXXXXXXXXXXXXAGTGTGMIVAPWRCGRVAIVAEPVTKNVVPSGLTSPPSSSATPPPLDELPDPKRTRRGDDLHESLCEIVDRPGHPPAAVSSPGPPQGPRESDGQWLSRRSDKTPRKTSTSSIATXXXXXXXXXXXXXXXXXXXXXXXX------------------QQEAKDGEGLFAEMDLSLEDDPTTAVSPTRPPRPAATAEDAAPSTAEDSHRTPLPRRKVAART---TGGEDPAIDIXXXXXXXXXXXXXXXXXXXXVDFEGEAWTPYSPRSDVSAEV 3211
WVR HNQRERMMYLRQQ EV EQHVPRNG+G DVAA SPAPPL C EAKQAG XXXXXXXXXX EVLWQEVGDDF A G GM+V PWR G VAIVAEP+TKNVVPSG TSPPS DELP+PKR RRG DLHESLCE+VD PGHPP VSSPGPP+G S QWL+RR DK P K ST S+AT XXXXXX Q+E GEGLFAE+DLSLED+ TT VS TR P +DAA STAE++HRTP P R +AART GG XXXXXXXXXXXXX VDFE EAWTP SPRSDVS E+
Sbjct: 234 WVRHHNQRERMMYLRQQ-EVSVEQHVPRNGAGDDVAAQSPAPPLSCEEAKQAGDGATAGXXXXXXXXXXVSPPSSPA--EVLWQEVGDDFGSSEAV-------AEAGAGMLVPPWRHGSVAIVAEPLTKNVVPSGATSPPSXXXXXXXXDELPNPKRIRRGGDLHESLCEVVDPPGHPPPGVSSPGPPRGSGGSGEQWLTRRKDKAPGKPSTPSMATPATAMSVATAGVSTPTSAXXXXXXXXXXXXXXXXXXXXXXAAQEEVNYGEGLFAEIDLSLEDESTT-VSQTRSPH-----KDAAVSTAEEAHRTPPPSRNIAARTHAAAGGXX----------XXXXXXXXXXXXXNEVDFEVEAWTPSSPRSDVSPEM 583
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVZ8_AURAN) HSP 1 Score: 155 bits (392), Expect = 3.010e-36 Identity = 86/215 (40.00%), Postives = 108/215 (50.23%), Query Frame = 1
Query: 919 DWDRRHLINDLSRGLENVKIQVCNNEDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCTEGCRDPNLCACLRLRAGKAGSAYSANIAGSGXXXXXXXXXXXXXXXXGPGRRRFYNDDGLLLHLPD--AIFECHSGCACN--PRRCKNRVVSRGVHLPLQVFRCAEPGKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLD 1551
+W R LI+D+S G+E V I+V F YV + GD DP CCDC +GC DP CAC+R G RR Y+DDG + + AI+EC++ CAC P CKNRVV G+ LPL+VFRC +GWG+RC IPAGSFVA Y GE+LTD D RGR D+Y+F +D
Sbjct: 175 EW--RVLISDVSNGIERVPIRVVGATHGPLPEPFSYVRENIPHGDFQPSDDPAFRACCDCADGCADPTRCACVRRT----------------------------------GDRRAYDDDGCVDWANEFPAIYECNASCACRDGPGGCKNRVVGAGLTLPLEVFRCDARERGWGVRCTRTIPAGSFVAVYCGELLTDEEADARGRTRGDEYLFNMD 353
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8J4_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.530e-34 Identity = 84/215 (39.07%), Postives = 112/215 (52.09%), Query Frame = 1
Query: 937 LINDLSRGLENVKIQVCNNEDEEKLPF-FRYVTGYVMGGDVHQK--KDPDDMVCCDCTEGCRDPNLCACLRLRAGKAGSAYSANIAGSGXXXXXXXXXXXXXXXXGPGRRRFYNDDGLLLHLPDAIFECHSGCACNPRRCKNRVVSRGVHLPLQVFRCAEPGKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLDF--ATCA 1566
L++D+S G E V I V N ED E P F Y+T M V ++P VCC CT+ CRDP C C + G Y A YN +G L AI+EC++ C C+ RC+NRVV +GV LQVFR A+ +GWG+RC+ IPAG+FV Y+GE+LT++ + RG Q D+Y+F LD+ A CA
Sbjct: 62 LLDDVSGGREQVSISVVNGEDAEGPPLDFTYIT-QPMSQTVRTVALRNPSFFVCCSCTDNCRDPATCECAQASGG-----YLA-----------------------------YNREGRLTDRCLAIYECNAFCGCHKSRCRNRVVGQGVTRRLQVFRTAD--RGWGVRCLNDIPAGAFVTDYIGEILTEKEAEARGMQNGDEYLFDLDYWAADCA 239
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMB6_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.740e-30 Identity = 67/175 (38.29%), Postives = 89/175 (50.86%), Query Frame = 1
Query: 964 ENVKIQVCNNEDEEKLPF-FRYVTGYVMGGDVHQKKDPDDMVCCDCTEGCRDPNLCACLRLRAGKAGSAYSANIAGSGXXXXXXXXXXXXXXXXGPGRRRFYNDDGLLLH-LPDAIFECHSGCACNPRRCKNRVVSRGVHLPLQVFRCAEPGKGWGLRCVEPIPAGSFVACYLGE 1482
E +I V N D+ P F YVT V G V +PD + CC CT+ CRDP C C A + G +++ Y+D G+++H P I+EC++ C+CN RCKNRVV G HL L+VFRC P KGWG+RC IP G+++ YLGE
Sbjct: 2 EKFEIPVVNEIDKAGPPLDFVYVTAPVAGEGVTLDNNPDHLGCCSCTDNCRDPTKCEC----ALRMGGSFA------------------------------YDDTGVIMHEKPGGIYECNARCSCNVNRCKNRVVGNGPHLRLEVFRCDNPLKGWGVRCKTDIPPGTYITDYLGE 142
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A564Z8W6_HYMDI) HSP 1 Score: 127 bits (320), Expect = 4.360e-27 Identity = 71/205 (34.63%), Postives = 99/205 (48.29%), Query Frame = 1
Query: 940 INDLSRGLENVKIQVCNNEDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCTEGCRDPNLCACLRLRAGKAGSAYSANIAGSGXXXXXXXXXXXXXXXXGPGRRRFYNDDGLLLHLPDAIFECHSGCACNPRRCKNRVVSRGVHLPLQVFRCAEPGKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLDF 1554
I DLS ENV + N+ D + P+ Y+T + G+V DP MVCCDCT+ CRD CAC +L +G + I S Y L H +++EC+ GC C+ RRC+NRVV G+ L LQVF+ KGWG+R + IP G+F+ Y G + D +G+ D+Y LD+
Sbjct: 141 IADLSYKKENVPVPCVNSLDNDAPPYMEYITQRMPFGNVKINDDPGFMVCCDCTDNCRDKTKCACQQLTIEASGISSENGIVDSSAG---------------------YRHRRLFKHHRGSVYECNPGCKCD-RRCQNRVVQNGLWLRLQVFKTQR--KGWGIRALNAIPRGTFICTYAGLIYDDSLAVTQGQTIGDEYQADLDY 321
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Uncharacterized (protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FPH6_HELRO) HSP 1 Score: 127 bits (320), Expect = 2.170e-26 Identity = 72/214 (33.64%), Postives = 108/214 (50.47%), Query Frame = 1
Query: 940 INDLSRGLENVKIQVCNNEDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCTEGCRDPNLCACLRLRAGKAGS--AYSANIAGSGXXXXXXXXXXXXXXXXGPGRRRFYNDDGLLLHLPDAIFECHSGCACNPRRCKNRVVSRGVHLPLQVFRCAEPGKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLDFATCAARQ 1575
+ D S+G E V + N+ DE++ Y T + G V+ DP +V CDCT+ CRD + C C++L G N AG Y+ L + AI+EC+S C+C+ R C+NRV+ G+ L LQ+F+ + KGWGLRC++ IPAG F+ Y G+VLT+ S ++ G+ D+Y+ LD R+
Sbjct: 530 VEDFSQGKEPVAVSCVNSLDEQRPDQIEYSTERIPGRGVNLNTDPSFLVGCDCTDNCRDRSKCKCIQLTVEATGCLPGNKNNKAG-------------------------YSHRRLKQPIITAIYECNSRCSCDSR-CRNRVIQNGLSLRLQIFKTEK--KGWGLRCLDDIPAGRFICVYSGQVLTEDSANEDGKLYGDEYLADLDHIDVVERE 715
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Uncharacterized (protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3TLV4_RODNA) HSP 1 Score: 128 bits (321), Expect = 3.240e-26 Identity = 72/205 (35.12%), Postives = 98/205 (47.80%), Query Frame = 1
Query: 940 INDLSRGLENVKIQVCNNEDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCTEGCRDPNLCACLRLRAGKAGSAYSANIAGSGXXXXXXXXXXXXXXXXGPGRRRFYNDDGLLLHLPDAIFECHSGCACNPRRCKNRVVSRGVHLPLQVFRCAEPGKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLDF 1554
I DLS ENV I N+ D + P+ Y+T + G V DP MVCCDCT+ CRD CAC +L +G + + S Y L H +++EC+ GC C+ RRC+NRVV G+ L LQVF+ KGWG+R + IP G+F+ Y G + D RG+ D+Y LD+
Sbjct: 607 IADLSYRKENVPIPCVNSLDNDAPPYMEYITQRMPYGHVKINDDPGFMVCCDCTDNCRDKTKCACQQLTIEASGISSENGMVDSSAG---------------------YRHRRLFKHHRGSVYECNPGCKCD-RRCQNRVVQNGLWLRLQVFKTQR--KGWGIRALNAIPRGTFICTYAGLIYNDSLAVTRGQTIGDEYQADLDY 787
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Uncharacterized (protein n=5 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A158QFJ0_HYMDI) HSP 1 Score: 127 bits (320), Expect = 4.250e-26 Identity = 71/205 (34.63%), Postives = 99/205 (48.29%), Query Frame = 1
Query: 940 INDLSRGLENVKIQVCNNEDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCTEGCRDPNLCACLRLRAGKAGSAYSANIAGSGXXXXXXXXXXXXXXXXGPGRRRFYNDDGLLLHLPDAIFECHSGCACNPRRCKNRVVSRGVHLPLQVFRCAEPGKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLDF 1554
I DLS ENV + N+ D + P+ Y+T + G+V DP MVCCDCT+ CRD CAC +L +G + I S Y L H +++EC+ GC C+ RRC+NRVV G+ L LQVF+ KGWG+R + IP G+F+ Y G + D +G+ D+Y LD+
Sbjct: 607 IADLSYKKENVPVPCVNSLDNDAPPYMEYITQRMPFGNVKINDDPGFMVCCDCTDNCRDKTKCACQQLTIEASGISSENGIVDSSAG---------------------YRHRRLFKHHRGSVYECNPGCKCD-RRCQNRVVQNGLWLRLQVFKTQR--KGWGIRALNAIPRGTFICTYAGLIYDDSLAVTQGQTIGDEYQADLDY 787
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphis TaxID=464929 RepID=A0A6G0TCH0_APHGL) HSP 1 Score: 124 bits (311), Expect = 6.110e-26 Identity = 69/206 (33.50%), Postives = 104/206 (50.49%), Query Frame = 1
Query: 937 LINDLSRGLENVKIQVCNNEDEEKLPFFRYVTGYVMGGDVHQKKDPDDMVCCDCTEGCRDPNLCACLRLRAGKAGSAYSANIAGSGXXXXXXXXXXXXXXXXGPGRRRFYNDDGLLLHLPDAIFECHSGCACNPRRCKNRVVSRGVHLPLQVFRCAEPGKGWGLRCVEPIPAGSFVACYLGEVLTDRSVDDRGRQTHDDYVFGLDF 1554
++D+S GLE I N + E+ P Y+T DV+ D D + CDC++ C+D + CAC +L S +++ G RR Y +P IFEC+ C CN R C NRVV + + L LQ+F+ + KGWG+RC+ IP G+F+ CY+G +L + +VD++G D+Y+ LDF
Sbjct: 197 FLDDISEGLEFKSISCVNGINGEQSPKLNYITNRQAITDVNLNLDTDFLCGCDCSDNCQDKSKCACWQLTIEAQSSIPNSD----------------KNEHLGYEYRRLYTA------IPTGIFECNKTCKCN-RLCLNRVVQQSLCLDLQLFKTKK--KGWGVRCLNDIPRGTFICCYIGNILNETNVDEQGINYGDEYLLDLDF 377 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7721.15888.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7721.15888.1 >prot_E_fasciculatus_S2_contig7721.15888.1 ID=prot_E_fasciculatus_S2_contig7721.15888.1|Name=mRNA_E_fasciculatus_S2_contig7721.15888.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=871bp MEQLRRRIPGYEHNSKSILTSLIMQGPSCRGAGSGSAGKDSKPESRVGKGback to top mRNA from alignment at E_fasciculatus_S2_contig7721:324..6786- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7721.15888.1 ID=mRNA_E_fasciculatus_S2_contig7721.15888.1|Name=mRNA_E_fasciculatus_S2_contig7721.15888.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6463bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7721:324..6786- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7721:324..6786- >mRNA_E_fasciculatus_S2_contig7721.15888.1 ID=mRNA_E_fasciculatus_S2_contig7721.15888.1|Name=mRNA_E_fasciculatus_S2_contig7721.15888.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2613bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7721:324..6786- (Ectocarpus fasciculatus EfasUO2)back to top |