mRNA_E_fasciculatus_S2_contig7700.15877.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: DAO (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS1_ECTSI) HSP 1 Score: 569 bits (1466), Expect = 2.060e-195 Identity = 296/334 (88.62%), Postives = 303/334 (90.72%), Query Frame = 1
Query: 1 LQQTVNDKLVDDAAG--GDDTEQANGPRGCLTTESVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPAYLKGLWSACRALVNAEDADRNASGDDXXXXXXXXXXXXXXXXXEEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLYVVPTTVDETGASAGGNGGKILLGSTQEPFMPGQKVDRPPDMAKALRQLRPKVARFFPALEGVTPIGCTAGVRVMQERNSYGRIPIAGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDRLPPQVVAPLEDLGKEATGDL 996
L QTVNDKLVDDAA GDD ANGPRGCLTT SVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAP YLKGLWSACRALVNA DADRNASG D +EGATWVRQSVEDVHALAASGEFNAVVACVGAGV+ALAGVKDIVSLRLYVVPTTVDETGA+ GGNG KILLGSTQEPFMPGQKVDRPPDMAKALRQLRPKVARFFPALEGVTP+GCTAGVRVMQER+SYGRIP+AGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDD LPPQVVAPLEDLGK+ATGDL
Sbjct: 59 LIQTVNDKLVDDAAAAAGDDASPANGPRGCLTTNSVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADRNASGGDSSGGDDGASSSPSR---KEGATWVRQSVEDVHALAASGEFNAVVACVGAGVKALAGVKDIVSLRLYVVPTTVDETGAAGGGNGDKILLGSTQEPFMPGQKVDRPPDMAKALRQLRPKVARFFPALEGVTPVGCTAGVRVMQERSSYGRIPVAGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDCLPPQVVAPLEDLGKDATGDL 389
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: DAO (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDY8_9PHAE) HSP 1 Score: 536 bits (1382), Expect = 2.070e-180 Identity = 295/390 (75.64%), Postives = 301/390 (77.18%), Query Frame = 1
Query: 1 LQQTVNDKLVDDAA--GGDDTEQANGPRGCLTTESVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPAYLKGLWSACRALVNAEDADRNASGDDXXXXXXXXXXXXXXXXXEEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRL--------------------------------------------------------YVVPTTVDETGASAGGNGGKILLGSTQEPFMPGQKVDRPPDMAKALRQLRPKVARFFPALEGVTPIGCTAGVRVMQERNSYGRIPIAGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDRLPPQVVAPLEDLGKEATGDL 996
L QTVNDKLV DAA GDD ANGPRGCLTT+SVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAP YLKGLWSACRALVNA D DRNA+GD +EGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRL YVVPTTVDETG GGNGGKILLGSTQEPFMPGQKVDRPPDMAKALRQLRPKVARFFPALEGVTPIGCTAGVRVMQER+SYGRIP+AGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDD LPPQVVAPLEDLGK+ATGDL
Sbjct: 159 LIQTVNDKLVHDAAVAAGDDAAPANGPRGCLTTDSVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADVDRNANGD----TSGGDNGASSSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLVRGQTLLYDNVGAARAAEPGGEGAAXXXXXXXXXXXXXXXXXXXXXXXXXAVLCGQYVVPTTVDETG---GGNGGKILLGSTQEPFMPGQKVDRPPDMAKALRQLRPKVARFFPALEGVTPIGCTAGVRVMQERSSYGRIPVAGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDHLPPQVVAPLEDLGKDATGDL 541
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: DAO (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN0_9STRA) HSP 1 Score: 145 bits (366), Expect = 6.640e-34 Identity = 114/307 (37.13%), Postives = 165/307 (53.75%), Query Frame = 1
Query: 85 LTTESVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPAYLKGLWSACRALVNAEDADRNASGDDXXXXXXXXXXXXXXXXXEEGAT------WVRQSVEDVHALAASGEFNAVVACVGAGVR-ALAGVKD--------IVSLRLYVVPTTVDETGASAGGNGGKILLGSTQEPFMPGQKVDRPPDMAKALRQ---LRPKVARFFPALEGVTPIGCTAGVRVMQERNSYGRIPIAGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDRLPPQV 951
+T + + RP+MD + D++ KAA PQW+ LT EE+ +A PG++P+ L GV I GA+A+D+ YL+GLW ACR + R+A+G XXXXXXXXXXX A+ QS +V E + GAG A+AG+++ V RL G +AG + + +G +V P A A+ + L KV F+PA + TAGVRV+++R+ +GRIP+AGR+P +R W +AALGARGLIHHA + + VAA A+ D D +P ++
Sbjct: 113 ITAQRIVRPIMDARAHDMYAKAAAANPQWLRWLTTEELCDAAPGTSPDALAGVEIAGAIAIDSRLYLRGLWEACR-----QGGRRSATGASTSIXXXXXXXXXXXSEAGGRASPSGERHGTSQSQVEVDTAKRRSESSEGSRSHGAGAASAVAGLRNGGKGGGARWVHERLTQAAVGALVEGENAGFDAVVLAVGFDA-------RVPPPRAAAAAVAERTALMQKVIEFYPAAANGDVLSVTAGVRVIRDRSKWGRIPLAGRVPGERRQWALAALGARGLIHHALIARSVAAAAICDDDSLIPQEL 407
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: FAD (dependent oxidoreductase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIP3_COCSC) HSP 1 Score: 91.3 bits (225), Expect = 1.910e-15 Identity = 93/346 (26.88%), Postives = 135/346 (39.02%), Query Frame = 1
Query: 46 GDDTEQANGPRGCLTTESVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPAYLKGLWSACRALVNAEDADRNASGDDXXXXXXXXXXXXXXXXXEEGATWVRQSVEDVHALA-ASGEFNAVVACVGAGVRALAGVKDIVSLRL---YV------------VPTTVDETGASAGGNG-----GKILLGST-----------------------QEPFMPGQKVDRPPDMAKALRQLRPKVARFFPALEGVTPIGCTAGVRVMQERNSYGRIPIAGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDRLPPQV 951
GDD + G RG +E + VD A LP EE + A G E + I G+ V YL+ LW AC E+ R+ G V + V +HAL G + AV+ GA L + D + + L Y VP G SA +G G LLGST Q G+ V P ++ A +L P+ A +P +G +GVR + R++ G +P+AG+L ++ WV+A LGARGL++HA+LG+L+A L D + LP ++
Sbjct: 216 GDDAQIDVGMRGA-ESEVAQGASVRAVGVDAAAAALPGLP--------EEALRAAVGRDLESSAALWIEGSHVVHPERYLRALWGAC------EETARSRGGQ---------------------CRLVGEKVASLHALEEVHGHYTAVIVAAGAAAGTLPEIGDKLPMELCQGYTLDLAPPRADTASVPVEASTPGGSAAVDGCSTYDGPSLLGSTYLAAQWRCHLVVGATKRYGLSSQQALEECGRAVSDPDEVTAAAAELVPRAAGAWPPAARWEMVGVRSGVRALPPRSAQGSLPLAGKLEAGRKWWVVAGLGARGLVYHAWLGRLIARAVLADDESELPGEL 525
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: Uncharacterized (protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SFH8_9CHLO) HSP 1 Score: 85.5 bits (210), Expect = 1.730e-13 Identity = 89/358 (24.86%), Postives = 146/358 (40.78%), Query Frame = 1
Query: 106 RPLMDEKQVDLFTKAAEDLPQ-------------------------WVESLTREEIMEAVPGSTPECL-----------GGVRIRGALAVDAPAYLKGLWSACRALVNAEDADRNASGDDXXXXXXXXXXXXXXXXXEEGATWVRQSVEDVHALAAS-GEFNAVVACVGAGVRALAGVKDIVSLRL---YVV--------PTTVDETGASAGGNG-----GKILLGST-----------------------QEPFMPGQKVDRPPDMAKALRQLRPKVARFFPALEGVTPIGCTAGVRVMQERNSYGRIPIAGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDRLPPQV 951
RP DE+Q F++ + LP+ V ++ + + AVPG + L + I G+ V YL+ LW AC E + R+A G V+++V + L AS G + AV+ GA AL + D + + L Y + P+ E +++G + G LLGST Q G+ V P + A A +L P+ + +P + +G +GVR + +R++ G +P+AG+L ++ WV+A LGARGL++HA+LG+L+A A D + LP ++
Sbjct: 299 RPAADERQAAAFSRLSAQLPENNSGSSRTGNNXXXXXXXXXXXXGASVRAVGVDAAVAAVPGLPEQALRSAVGPDLAGSAALWIEGSHVVHPERYLRALWGAC------EGSARSAGGI---------------------CRLVKETVTSLEELEASQGPYAAVIVAAGAAAGALPEIGDRLPMELCQGYTLDLAPQRSAPSGASEEASTSGHSHADKYQGPSLLGSTYLAAQGCSHLVAGATKRYGLSSRQALEECGRAVRDPAEAAAAAAELLPRASVVWPPVARWDVVGVRSGVRALPQRSAQGSLPLAGKLEGGRKWWVVAGLGARGLVYHAWLGRLIACAATTDDESVLPQEL 629
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: DAO (domain-containing protein n=4 Tax=Camelineae TaxID=980083 RepID=R0EU33_9BRAS) HSP 1 Score: 83.6 bits (205), Expect = 3.580e-13 Identity = 85/311 (27.33%), Postives = 136/311 (43.73%), Query Frame = 1
Query: 100 VYRPLMDEKQVDLFTKAAEDLPQ--WVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPAYLKGLWSACRALVNAEDADRNASGDDXXXXXXXXXXXXXXXXXEEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLYVVPTTVDETGASAGG--NGGKILL---------------GSTQEPFMPGQKVDRPPDMA-KALRQLRPKVARFFPALEGVTPIGCTAGVRVMQERNSYGRIPIAGRLPF-------SKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDRLPPQV 951
+ RP + K +DL + A + VE++ R+ VP GA+ V+ YL+ L+ AC+ + +N T V++S++DV L GE++AVV C+G+ V L G+ + LR T + SA G +GG +L GST E D + A +AL +L PK + +P +E G AG+R M S+G +P+ G + S + WV A LG+RGL++HA+LGKL+A L ++++P ++
Sbjct: 154 ILRPATNAKTLDLMSDNARNCLASCLVETIDRDAAQNLVPNLCLPLNCAFSFPGAMNVNPQLYLQALFLACQNSASTSLGRKNV-------------------------TLVKKSIDDV--LELEGEYDAVVICLGSKVDFLTGLTGKLPLRTCRGVITHLQLPESARGYPDGGPSILSDAWLAVQGSRNLHMGSTWEWQSRNYSSDVTAEEASRALAELLPKASAVYPDIENWRFAGARAGLRAMPPVTSHGSLPLLGCVNKLIGAAGESSKFWVFAGLGSRGLLYHAWLGKLMANAVLSCKEEQIPSEL 437
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: DAO (domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGK5_CHOCR) HSP 1 Score: 79.3 bits (194), Expect = 3.770e-12 Identity = 89/352 (25.28%), Postives = 140/352 (39.77%), Query Frame = 1
Query: 61 QANGPRGCLTT-ESVYRPLMDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPAYLKGLWSACRALVNAEDADRNASGDDXXXXXXXXXXXXXXXXXEEGATWVRQSVEDVHAL----------------AASGEFNAVVACVGAGVRALAGVKDIV-------SLRL-----------------YVVPT-------TVDETGASAGGNGGKILLGSTQEPFMPGQKVDR------PPDMAKALRQLRPKVARFFPAL-EGVTPIGCTAGVRVMQERNSYGRIPIAGRLPFSKRG---WVIAALGARGLIHHAYLGKLVAACALLDSDDRLP 942
Q P C+ + R + EK F +AA P+ ++ L EE+ + G+ PE + G IR A VD AY++ LW C E++ R W R+ V +V AL A S F+ V+ C GA ++A+ G ++I +L L Y+VP D+ G +I+ G+T E Q D+ +A +L + R P L +G G ++G R + R+ G IPIA R+ ++ WV LG+RGL+HHAYLG+++A + ++ +P
Sbjct: 12 QEKTPARCIVRFPGLLRLALTEKMRTDFQQAAHRFPREIQFLEAEEVRQRFSGA-PEGVCGALIRDAAVVDTSAYVRNLWQVC------EESGR--------------------------VRWQREDVSNVSALFEGGTKADRGGMASNGAQSTSFDTVILCAGASIKAIRGFQNIPLTACRGQNLHLESARPDATLGTPVISGKYIVPEYFSGSSDAQDDETVDRGVQ--RIIAGATFEYKDSDQSETEFLEESCKNDVVRATSELDEPLHRLVPDLYDGWNITGSSSGTRALPPRSVEGSIPIACRVSGTREDVSCWVFTGLGSRGLLHHAYLGRMLAHAVVAGNEGLIP 328
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: uncharacterized (protein LOC104773265 isoform X3 n=2 Tax=Camelina sativa TaxID=90675 RepID=UPI000900CD87) HSP 1 Score: 78.6 bits (192), Expect = 6.080e-12 Identity = 85/309 (27.51%), Postives = 131/309 (42.39%), Query Frame = 1
Query: 100 VYRPLMDEKQVDLFTKAAEDLPQW--VESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPAYLKGLWSACRALVNAEDADRNASGDDXXXXXXXXXXXXXXXXXEEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRLYVVPTTVDETGASAGG--NGGKILL---------------GSTQEPFMPGQKVDRPPDMA-KALRQLRPKVARFFPALEGVTPIGCTAGVRVMQERNSYGRIP--------IAGRLPFSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDRLP 942
+ RP + K +DL + A + VE++ ++ VP A+ V+ YL+ L+ AC+ A +N T V++S++DV L GE++AVV C+G+ + L G+ + LR T E SA G +GG +L GST E D + A +AL +L PK +P +E G AG+R M S+G +P I G S + WV A LG+RGL++HA+LGKL+A L ++++P
Sbjct: 41 ILRPATNAKTLDLMSDNARNCLASCVVETIDKDGAQNLVPNLCLPLNCAFYFPEAMNVNPQRYLQALFLACQNTAEASLGRKNV-------------------------TLVKKSIDDVFEL--EGEYDAVVICLGSKIDFLPGLIGKLPLRTCRGVITHLELPESARGYPDGGPSILSDAWLAVQGSRNLHMGSTWEWQSRNYSSDVTAEEASRALEELLPKAIAVYPDIEKWRFTGARAGLRAMPPVTSHGSLPLLGCVDKLIGGAAGESSKFWVFAGLGSRGLLYHAWLGKLLANAVLSCKEEQIP 322
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJQ8_9EUKA) HSP 1 Score: 72.8 bits (177), Expect = 8.610e-12 Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 697 LRPKVARFFPALEGVTPIGCTAGVRVMQERNSYGRIPIAGRLPFSKRG----WVIAALGARGLIHHAYLGKLVAACALLDSDDRLPPQV 951
LR ++R +P +GC AGVR + R+ +G +PIA RLP W++ LG+RGLIHHA LGK +AA L + L P V
Sbjct: 5 LREPLSRLYPPSSHAPVVGCQAGVRALPPRSHFGYVPIADRLPVPNLNGTQVWMLTGLGSRGLIHHALLGKELAAAILARDESMLHPHV 93
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Match: DAO (domain-containing protein n=6 Tax=Myrtoideae TaxID=1699513 RepID=A0A059CKU1_EUCGR) HSP 1 Score: 76.3 bits (186), Expect = 6.790e-11 Identity = 78/316 (24.68%), Postives = 137/316 (43.35%), Query Frame = 1
Query: 100 VYRPLMDEKQVDLFTKAAEDLPQW--VESLTREEIMEAVPGSTPECLGGVRIRGALAVDAPAYLKGLWSACRALVNAEDADRNASGDDXXXXXXXXXXXXXXXXXEEGATWVRQSVEDVHALAASGEFNAVVACVGAGVRALAGVKDIVSLRL-------YVVPTTVDET----------GASAGGNGGK-ILLGSTQE----PFMPGQKVDRPPDMAKALRQLRPKVARFFPALEGVTPIGCTAGVRVMQERNSYGRIPIAGRLP------FSKRGWVIAALGARGLIHHAYLGKLVAACALLDSDDRLPPQVVA 957
+ RP MD K + + T A++ + +ES+ ++ VP + A+ + YL+ L+ AC+ LV E+ ++ G ++S++ + GE++AV+ C+GA L + + LR +P V ET A G + IL+GST E + G + + + AL+QL PK + +P ++ + +G AG+R M S+G +P+ GR+ S + W LGARGL++H LG+L+A L + + LP ++ +
Sbjct: 123 ILRPAMDAKHLSILTNNAQNCLPFCKIESIDKDAAEALVPNIKVPFNSVFHMPEAVNIHPLCYLQALFLACQDLV--EEMSTSSFGGKELYMH-------------------KKSIDRLSDF--EGEYDAVIVCLGAKADLLPELSGRLPLRTCRGVIAHLQLPDNVGETYPDHSPSILSDAWLAVQGPRDILVGSTWEWKSRNYSSGVSAE---EASTALKQLLPKASAIYPKIKDWSFVGAKAGIRAMPPLTSFGSLPVLGRIDDLVVGNHSCKYWFFGGLGARGLLYHGLLGRLMAQAVLFNDETLLPVELTS 412 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7700.15877.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7700.15877.1 >prot_E_fasciculatus_S2_contig7700.15877.1 ID=prot_E_fasciculatus_S2_contig7700.15877.1|Name=mRNA_E_fasciculatus_S2_contig7700.15877.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=295bp MDEKQVDLFTKAAEDLPQWVESLTREEIMEAVPGSTPECLGGVRIRGALAback to top mRNA from alignment at E_fasciculatus_S2_contig7700:1348..6764- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7700.15877.1 ID=mRNA_E_fasciculatus_S2_contig7700.15877.1|Name=mRNA_E_fasciculatus_S2_contig7700.15877.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5417bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7700:1348..6764- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7700:1348..6764- >mRNA_E_fasciculatus_S2_contig7700.15877.1 ID=mRNA_E_fasciculatus_S2_contig7700.15877.1|Name=mRNA_E_fasciculatus_S2_contig7700.15877.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=885bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7700:1348..6764- (Ectocarpus fasciculatus EfasUO2)back to top |