mRNA_E_fasciculatus_S2_contig766.15831.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: FCP1 (homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY9_ECTSI) HSP 1 Score: 771 bits (1992), Expect = 4.130e-277 Identity = 465/516 (90.12%), Postives = 469/516 (90.89%), Query Frame = 1
Query: 7 GSSRDYGGMIGPVSPLSQALHIALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRTGG---SVDSSQRSSGSGPVKRXXXXXXXXXXXXXXXXXAGGVLSSPVVRRLRAAWSSLWHAVEDDLATRWRAAGRVLXXXXXXXXXXXVPPPHAEADILAGALASPPRYPHGATDRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGRTSGSRGGRGALGGTDGSSPSEKGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXX---APRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLRPGVG 1536
GSSRDYG MIGPVSPLSQALH+ALAFVVLVLVAIAKADDVTAVRATPYAKGA YS SGSNSGSSGAPGSTPARRKGSRTGG SVDSSQRSSGSGPVKR GGVLS+PVVR LRAAWSSLWHAVEDDLATRWRAAGRVL XXXXXXXXXVPPPHAEADILAGALASPPRYPHGA R XXXXXXXXXXXXXXX XXXXXXXXXXXXX GGRTSGSRGGRGALG TDGSSPSEKGLHLGRPVGLNCLNFLSLCGYRPGGG+GSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXX APRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAA P TGRTARGATGVPTATA EAGAPP+ SESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFP D EDRQLLDLLPVLLALTSCQDVRSVL LRPGVG
Sbjct: 2 GSSRDYGEMIGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGASYSCSGSNSGSSGAPGSTPARRKGSRTGGGSGSVDSSQRSSGSGPVKRRRIASSSGKEKIGRRR-GGGVLSAPVVRHLRAAWSSLWHAVEDDLATRWRAAGRVLTRXXXXXXXXXVPPPHAEADILAGALASPPRYPHGAAGRXXXXXXXXXXXXXXXXGVGSVXXXXXXXXXXXXXXGGRTSGSRGGRGALGATDGSSPSEKGLHLGRPVGLNCLNFLSLCGYRPGGGKGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAAPPDTGRTARGATGVPTATA-EAGAPPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVG 515
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: FCP1 (homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM9_9PHAE) HSP 1 Score: 744 bits (1921), Expect = 8.610e-262 Identity = 453/514 (88.13%), Postives = 460/514 (89.49%), Query Frame = 1
Query: 10 SSRDYGGMIGPVSPLSQALHIALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRTGGSVDSSQRSS---GSGPVKRXXXXXXXXXXXXXXXXXAGGVLSSPVVRRLRAAWSSLWHAVEDDLATRWRAAGRVLXXXXXXXXXXXVPPPHAEADILAGALASPPRYPHGATDRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SGGRTSGSRGGRGALGGTDGSSPSEKGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLRPGVG 1536
SSRDYGGMIGPVSPLSQALH+ALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRT G+GPVKR XXX GGVL+SPV R LRAAWSSLWHAVEDDLATRWRAAGRVL XXXXXXXXXXVPPPHAEADILAGALASPP YPHGAT RRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGGRTSG+RGGRGALG TDGS PSEKGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPH+MQPPRRHGG APRPDLKLEMRGRAPSDNRPSCM+AWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAA P TGRTARGATGVP ATA EAGAPP+ SESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFP D EDRQLLDLLPVLLALTSCQDVRSVL LRPGVG
Sbjct: 304 SSRDYGGMIGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRTXXXXXXXXXXXXXXGAGPVKRRRIASXXXKGKIGRRR-GGGVLTSPVARHLRAAWSSLWHAVEDDLATRWRAAGRVLMXXXXXXXXXXVPPPHAEADILAGALASPPCYPHGATGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGRTSGARGGRGALGATDGSGPSEKGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPHVMQPPRRHGGGGRG----APRPDLKLEMRGRAPSDNRPSCMDAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAAPPDTGRTARGATGVPVATA-EAGAPPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVG 811
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYX4_9CRYP) HSP 1 Score: 114 bits (284), Expect = 3.240e-25 Identity = 81/223 (36.32%), Postives = 106/223 (47.53%), Query Frame = 1
Query: 859 KFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTV-VQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
K L+LDLDETLVH SP + RH D K+ + C KRPH+D FL VSRW+E+ VFT+ Q +A+P+IDLID ++ +RF+R SCV R+G VKDL V + + V+VDN P + + N LP+++W D D LLDLLPVL L DVRS+L LR
Sbjct: 54 KMTLVLDLDETLVHSSPKRLF---RH--------------DYKIHIS--TADSPMGCCFFVAKRPHIDRFLRAVSRWFEIVVFTASLQHYADPVIDLIDPERLVCRRFFRGSCVDRNG-------------------------------NLVKDLSNVRRDLS--QVVIVDNSPTAYSLHEDNALPIETWLD-DPADEALLDLLPVLSGLALLNDVRSILSLR 223
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3RZ75_9EUKA) HSP 1 Score: 107 bits (268), Expect = 7.800e-23 Identity = 85/258 (32.95%), Postives = 125/258 (48.45%), Query Frame = 1
Query: 760 KGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSC--MNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTV-VQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
+GLH+ R V N RG R +++L+LDLDETLVH S R GG D +LE+ N+ C +KRP+L FL ++S++YE+ VFT+ + +A+PLID++DS V+ +RF+R SC+ R+G+ VKDL V RTV+VDN P + + N +PVK ++ D +DR+LL +P L+AL+ DVR +L R
Sbjct: 55 RGLHMPRAVVTN--------------NRGQRL-RYVLVLDLDETLVHTS--------RWGGSRSA--------DCRLEIF------NKHDCRAFYVYKRPYLTKFLYLMSQYYEIVVFTASMRQYADPLIDILDSHRVVSRRFFRKSCIERNGS-------------------------------YVKDLNRVAPNLE--RTVIVDNSPIAYSMNKENAVPVKPYYD-DPDDRELLTCIPFLIALSKLPDVRMLLRRR 241
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Phosphatase (isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W254_GALSU) HSP 1 Score: 108 bits (270), Expect = 3.040e-22 Identity = 75/224 (33.48%), Postives = 109/224 (48.66%), Query Frame = 1
Query: 868 LLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRT-VVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLRPGVG 1536
L+LDLDETLVH + R + ++R DN PS KRP+LDVFL VVS+WY++ V+T+ Q +A+PLID +D VI +R++RD C++ + VKD+ ++ E + V+VDN P V+ + N +P+ +W+ D D +LL+LLP L AL DVRS+L LR G
Sbjct: 173 LVLDLDETLVHSTT---------------------RQNSHFDIRLEVSVDNCPSIFYVNKRPYLDVFLRVVSQWYDLVVYTASLQKYADPLIDALDVHGVIRERYFRDHCIQVG-------------------------------NNFVKDISII--EPDLRKIVIVDNSPSAYVLHEENAIPIGTWWD-DPLDEELLNLLPFLQALCVLADVRSILSLRETKG 341
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: FCP1 (homology domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BH61_COERN) HSP 1 Score: 106 bits (265), Expect = 1.150e-21 Identity = 76/226 (33.63%), Postives = 103/226 (45.58%), Query Frame = 1
Query: 853 QPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRC-VIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTV-VQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
Q K +L+LDLDETL+H SPH + R D +KRPH+D FL VS WY V VFT+ +A+P+IDL+D++ I R++RDSCV D S K+L V + + VLVDN P + + N +P++ W +D +D LLDLLP+L AL DVRS+L LR
Sbjct: 170 QKKKILVLDLDETLIHSSPH---------------------GSYRAHHRIEVVIDKVACLYYVYKRPHVDYFLRKVSEWYTVVVFTASLAEYADPVIDLLDTQGKFISGRYFRDSCVPHD-------------------------------SSYAKNLLAVNLDLSQI--VLVDNSPLSYFINPTNGIPIQPWINSDPKDEALLDLLPLLDALRFTDDVRSILSLR 341
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUK7_HETAK) HSP 1 Score: 99.0 bits (245), Expect = 2.550e-20 Identity = 74/220 (33.64%), Postives = 106/220 (48.18%), Query Frame = 1
Query: 868 LLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMR--GRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLID-SRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQA-NVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVL 1515
L+LDLDETLVHC+ R G R DL +R G + R + + A KRPHLD FL R +EV VFT+ ++ +A+ L+D +D R ++ R +R++C+ + +KDL+ +G + P RTVLVDN P Q N +P+ SWF D D +LL LLP L AL + +DVR ++
Sbjct: 8 LVLDLDETLVHCTA-------RPGA----------RADLTFPVRLGGAGADEERTAVVRARKRPHLDAFLRRARRLFEVVVFTASQRVYADALLDRLDPGRRLVEHRLFREACLEVE-------------------------------RNFLKDLRPLGRD--PRRTVLVDNSPYAYAYQPDNGVPIASWFD-DAGDTELLKLLPFLEALAAARDVRPII 176
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Similar (to nuclear LIM interactor-interacting factor n=2 Tax=cellular organisms TaxID=131567 RepID=M1V9F0_CYAM1) HSP 1 Score: 105 bits (261), Expect = 2.870e-20 Identity = 73/222 (32.88%), Postives = 116/222 (52.25%), Query Frame = 1
Query: 865 LLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLID-SRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRT-VVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
+L+LDLDETLVH S R+G D+ +E+ D+ P+ KRPHL++F+ V +WY++ +FT+ + +A+PL+D +D +R + R++R+ CVR +P P VK+L ++ + ++VDN P + +Q AN LP+ +W+ D D +LL+LLPVL +L+ +DVRSVLGLR
Sbjct: 385 ILVLDLDETLVHSSFK-----ERNGC------------DITVEVE----VDDVPTVFFVRKRPHLELFIRVARQWYDLVIFTASLRRYADPLVDALDPTRTLFRARYFREDCVR------------------LP------------PYNFVKNLNIISPNLG--KVIIVDNSPASYALQAANALPIDAWYD-DPFDEELLNLLPVLRSLSILEDVRSVLGLR 552
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Hypothetical (protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814NBF7_9BILA) HSP 1 Score: 99.8 bits (247), Expect = 3.360e-20 Identity = 72/224 (32.14%), Postives = 101/224 (45.09%), Query Frame = 1
Query: 856 PKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDS-RCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQA-NVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGL 1521
PK +L+LDLDETL+H H G +P + R + P +KRPH+D FL +VS+WYE+ VFT+ + + + D +D+ R ++ +R+YR C GA S KDL + + R ++DN P N +P+KSWF D D LL LLP L AL C+DVRSVLG+
Sbjct: 27 PKKILVLDLDETLIHS---------HHDGLSRVVTV---KPTGSPDFIIRVEIERHPVRFFVYKRPHVDYFLEIVSKWYELVVFTASMEIYGAAVADKLDNNRNILNRRYYRQHCTLEFGAYS-------------------------------KDLAAINDDLS--RIFILDNSPIAYRSYPLNAIPIKSWF-FDPTDTSLLSLLPFLDALRFCRDVRSVLGM 204
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: CTD (nuclear envelope phosphatase 1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMA8_9RHOD) HSP 1 Score: 104 bits (260), Expect = 3.740e-20 Identity = 77/222 (34.68%), Postives = 115/222 (51.80%), Query Frame = 1
Query: 865 LLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLID-SRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRT-VVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
+L+LDLDETLVH S + DL +E+ D+ P+ KRPHL++F+ VV +WY++ +FT+ + +A+PLID +D + + R++RD CVR +P P VK+L VV S H + ++VDN P + + AN LP+ +W+ D D +LL+LLPVL +L+ +DVRSVLGLR
Sbjct: 378 ILILDLDETLVHSS-----------------FKDSTGCDLTVEVD----VDDVPTVFFVRKRPHLELFIRVVRQWYDLVIFTASLRRYADPLIDALDPTGSLFCARYFRDDCVR------------------LP------------PFNFVKNLSVV-SPHLG-KVIIVDNSPASYAMHAANALPIDAWYD-DPFDEELLNLLPVLRSLSVLEDVRSVLGLR 545 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig766.15831.1 >prot_E_fasciculatus_S2_contig766.15831.1 ID=prot_E_fasciculatus_S2_contig766.15831.1|Name=mRNA_E_fasciculatus_S2_contig766.15831.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=526bp MGGSSRDYGGMIGPVSPLSQALHIALAFVVLVLVAIAKADDVTAVRATPYback to top mRNA from alignment at E_fasciculatus_S2_contig766:25473..27440+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig766.15831.1 ID=mRNA_E_fasciculatus_S2_contig766.15831.1|Name=mRNA_E_fasciculatus_S2_contig766.15831.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1968bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig766:25473..27440+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig766:25473..27440+ >mRNA_E_fasciculatus_S2_contig766.15831.1 ID=mRNA_E_fasciculatus_S2_contig766.15831.1|Name=mRNA_E_fasciculatus_S2_contig766.15831.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1578bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig766:25473..27440+ (Ectocarpus fasciculatus EfasUO2)back to top |