mRNA_E_fasciculatus_S2_contig766.15831.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig766.15831.1
Unique NamemRNA_E_fasciculatus_S2_contig766.15831.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: FCP1 (homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY9_ECTSI)

HSP 1 Score: 771 bits (1992), Expect = 4.130e-277
Identity = 465/516 (90.12%), Postives = 469/516 (90.89%), Query Frame = 1
Query:    7 GSSRDYGGMIGPVSPLSQALHIALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRTGG---SVDSSQRSSGSGPVKRXXXXXXXXXXXXXXXXXAGGVLSSPVVRRLRAAWSSLWHAVEDDLATRWRAAGRVLXXXXXXXXXXXVPPPHAEADILAGALASPPRYPHGATDRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGRTSGSRGGRGALGGTDGSSPSEKGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXX---APRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLRPGVG 1536
            GSSRDYG MIGPVSPLSQALH+ALAFVVLVLVAIAKADDVTAVRATPYAKGA YS SGSNSGSSGAPGSTPARRKGSRTGG   SVDSSQRSSGSGPVKR                  GGVLS+PVVR LRAAWSSLWHAVEDDLATRWRAAGRVL  XXXXXXXXXVPPPHAEADILAGALASPPRYPHGA  R XXXXXXXXXXXXXXX     XXXXXXXXXXXXX GGRTSGSRGGRGALG TDGSSPSEKGLHLGRPVGLNCLNFLSLCGYRPGGG+GSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXX   APRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAA P TGRTARGATGVPTATA EAGAPP+ SESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFP D EDRQLLDLLPVLLALTSCQDVRSVL LRPGVG
Sbjct:    2 GSSRDYGEMIGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGASYSCSGSNSGSSGAPGSTPARRKGSRTGGGSGSVDSSQRSSGSGPVKRRRIASSSGKEKIGRRR-GGGVLSAPVVRHLRAAWSSLWHAVEDDLATRWRAAGRVLTRXXXXXXXXXVPPPHAEADILAGALASPPRYPHGAAGRXXXXXXXXXXXXXXXXGVGSVXXXXXXXXXXXXXXGGRTSGSRGGRGALGATDGSSPSEKGLHLGRPVGLNCLNFLSLCGYRPGGGKGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAAPPDTGRTARGATGVPTATA-EAGAPPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVG 515          
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: FCP1 (homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM9_9PHAE)

HSP 1 Score: 744 bits (1921), Expect = 8.610e-262
Identity = 453/514 (88.13%), Postives = 460/514 (89.49%), Query Frame = 1
Query:   10 SSRDYGGMIGPVSPLSQALHIALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRTGGSVDSSQRSS---GSGPVKRXXXXXXXXXXXXXXXXXAGGVLSSPVVRRLRAAWSSLWHAVEDDLATRWRAAGRVLXXXXXXXXXXXVPPPHAEADILAGALASPPRYPHGATDRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SGGRTSGSRGGRGALGGTDGSSPSEKGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLRPGVG 1536
            SSRDYGGMIGPVSPLSQALH+ALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRT              G+GPVKR     XXX          GGVL+SPV R LRAAWSSLWHAVEDDLATRWRAAGRVL XXXXXXXXXXVPPPHAEADILAGALASPP YPHGAT RRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SGGRTSG+RGGRGALG TDGS PSEKGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPH+MQPPRRHGG        APRPDLKLEMRGRAPSDNRPSCM+AWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAA P TGRTARGATGVP ATA EAGAPP+ SESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFP D EDRQLLDLLPVLLALTSCQDVRSVL LRPGVG
Sbjct:  304 SSRDYGGMIGPVSPLSQALHMALAFVVLVLVAIAKADDVTAVRATPYAKGAGYSGSGSNSGSSGAPGSTPARRKGSRTXXXXXXXXXXXXXXGAGPVKRRRIASXXXKGKIGRRR-GGGVLTSPVARHLRAAWSSLWHAVEDDLATRWRAAGRVLMXXXXXXXXXXVPPPHAEADILAGALASPPCYPHGATGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGRTSGARGGRGALGATDGSGPSEKGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPHVMQPPRRHGGGGRG----APRPDLKLEMRGRAPSDNRPSCMDAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAAPPDTGRTARGATGVPVATA-EAGAPPKSSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQANVLPVKSWFPRDTEDRQLLDLLPVLLALTSCQDVRSVLSLRPGVG 811          
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYX4_9CRYP)

HSP 1 Score: 114 bits (284), Expect = 3.240e-25
Identity = 81/223 (36.32%), Postives = 106/223 (47.53%), Query Frame = 1
Query:  859 KFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTV-VQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
            K  L+LDLDETLVH SP  +    RH              D K+ +           C    KRPH+D FL  VSRW+E+ VFT+  Q +A+P+IDLID   ++ +RF+R SCV R+G                                 VKDL  V  +    + V+VDN P    + + N LP+++W   D  D  LLDLLPVL  L    DVRS+L LR
Sbjct:   54 KMTLVLDLDETLVHSSPKRLF---RH--------------DYKIHIS--TADSPMGCCFFVAKRPHIDRFLRAVSRWFEIVVFTASLQHYADPVIDLIDPERLVCRRFFRGSCVDRNG-------------------------------NLVKDLSNVRRDLS--QVVIVDNSPTAYSLHEDNALPIETWLD-DPADEALLDLLPVLSGLALLNDVRSILSLR 223          
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3RZ75_9EUKA)

HSP 1 Score: 107 bits (268), Expect = 7.800e-23
Identity = 85/258 (32.95%), Postives = 125/258 (48.45%), Query Frame = 1
Query:  760 KGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSC--MNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTV-VQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
            +GLH+ R V  N               RG R  +++L+LDLDETLVH S        R GG            D +LE+       N+  C     +KRP+L  FL ++S++YE+ VFT+  + +A+PLID++DS  V+ +RF+R SC+ R+G+                                VKDL  V       RTV+VDN P    + + N +PVK ++  D +DR+LL  +P L+AL+   DVR +L  R
Sbjct:   55 RGLHMPRAVVTN--------------NRGQRL-RYVLVLDLDETLVHTS--------RWGGSRSA--------DCRLEIF------NKHDCRAFYVYKRPYLTKFLYLMSQYYEIVVFTASMRQYADPLIDILDSHRVVSRRFFRKSCIERNGS-------------------------------YVKDLNRVAPNLE--RTVIVDNSPIAYSMNKENAVPVKPYYD-DPDDRELLTCIPFLIALSKLPDVRMLLRRR 241          
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Phosphatase (isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W254_GALSU)

HSP 1 Score: 108 bits (270), Expect = 3.040e-22
Identity = 75/224 (33.48%), Postives = 109/224 (48.66%), Query Frame = 1
Query:  868 LLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRT-VVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLRPGVG 1536
            L+LDLDETLVH +                      R +   ++R     DN PS     KRP+LDVFL VVS+WY++ V+T+  Q +A+PLID +D   VI +R++RD C++                                 +  VKD+ ++  E    + V+VDN P   V+ + N +P+ +W+  D  D +LL+LLP L AL    DVRS+L LR   G
Sbjct:  173 LVLDLDETLVHSTT---------------------RQNSHFDIRLEVSVDNCPSIFYVNKRPYLDVFLRVVSQWYDLVVYTASLQKYADPLIDALDVHGVIRERYFRDHCIQVG-------------------------------NNFVKDISII--EPDLRKIVIVDNSPSAYVLHEENAIPIGTWWD-DPLDEELLNLLPFLQALCVLADVRSILSLRETKG 341          
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: FCP1 (homology domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BH61_COERN)

HSP 1 Score: 106 bits (265), Expect = 1.150e-21
Identity = 76/226 (33.63%), Postives = 103/226 (45.58%), Query Frame = 1
Query:  853 QPKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRC-VIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTV-VQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
            Q K +L+LDLDETL+H SPH                        +   R     D        +KRPH+D FL  VS WY V VFT+    +A+P+IDL+D++   I  R++RDSCV  D                               S   K+L  V  +   +  VLVDN P +  +   N +P++ W  +D +D  LLDLLP+L AL    DVRS+L LR
Sbjct:  170 QKKKILVLDLDETLIHSSPH---------------------GSYRAHHRIEVVIDKVACLYYVYKRPHVDYFLRKVSEWYTVVVFTASLAEYADPVIDLLDTQGKFISGRYFRDSCVPHD-------------------------------SSYAKNLLAVNLDLSQI--VLVDNSPLSYFINPTNGIPIQPWINSDPKDEALLDLLPLLDALRFTDDVRSILSLR 341          
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUK7_HETAK)

HSP 1 Score: 99.0 bits (245), Expect = 2.550e-20
Identity = 74/220 (33.64%), Postives = 106/220 (48.18%), Query Frame = 1
Query:  868 LLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMR--GRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLID-SRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQA-NVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVL 1515
            L+LDLDETLVHC+        R G           R DL   +R  G    + R + + A KRPHLD FL    R +EV VFT+ ++ +A+ L+D +D  R ++  R +R++C+  +                                  +KDL+ +G +  P RTVLVDN P     Q  N +P+ SWF  D  D +LL LLP L AL + +DVR ++
Sbjct:    8 LVLDLDETLVHCTA-------RPGA----------RADLTFPVRLGGAGADEERTAVVRARKRPHLDAFLRRARRLFEVVVFTASQRVYADALLDRLDPGRRLVEHRLFREACLEVE-------------------------------RNFLKDLRPLGRD--PRRTVLVDNSPYAYAYQPDNGVPIASWFD-DAGDTELLKLLPFLEALAAARDVRPII 176          
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Similar (to nuclear LIM interactor-interacting factor n=2 Tax=cellular organisms TaxID=131567 RepID=M1V9F0_CYAM1)

HSP 1 Score: 105 bits (261), Expect = 2.870e-20
Identity = 73/222 (32.88%), Postives = 116/222 (52.25%), Query Frame = 1
Query:  865 LLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLID-SRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRT-VVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
            +L+LDLDETLVH S        R+G             D+ +E+      D+ P+     KRPHL++F+ V  +WY++ +FT+  + +A+PL+D +D +R +   R++R+ CVR                  +P            P   VK+L ++       + ++VDN P +  +Q AN LP+ +W+  D  D +LL+LLPVL +L+  +DVRSVLGLR
Sbjct:  385 ILVLDLDETLVHSSFK-----ERNGC------------DITVEVE----VDDVPTVFFVRKRPHLELFIRVARQWYDLVIFTASLRRYADPLVDALDPTRTLFRARYFREDCVR------------------LP------------PYNFVKNLNIISPNLG--KVIIVDNSPASYALQAANALPIDAWYD-DPFDEELLNLLPVLRSLSILEDVRSVLGLR 552          
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: Hypothetical (protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814NBF7_9BILA)

HSP 1 Score: 99.8 bits (247), Expect = 3.360e-20
Identity = 72/224 (32.14%), Postives = 101/224 (45.09%), Query Frame = 1
Query:  856 PKFLLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDS-RCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRTVVQQA-NVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGL 1521
            PK +L+LDLDETL+H           H G          +P    +   R   +  P     +KRPH+D FL +VS+WYE+ VFT+  + +   + D +D+ R ++ +R+YR  C    GA S                               KDL  +  +    R  ++DN P        N +P+KSWF  D  D  LL LLP L AL  C+DVRSVLG+
Sbjct:   27 PKKILVLDLDETLIHS---------HHDGLSRVVTV---KPTGSPDFIIRVEIERHPVRFFVYKRPHVDYFLEIVSKWYELVVFTASMEIYGAAVADKLDNNRNILNRRYYRQHCTLEFGAYS-------------------------------KDLAAINDDLS--RIFILDNSPIAYRSYPLNAIPIKSWF-FDPTDTSLLSLLPFLDALRFCRDVRSVLGM 204          
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Match: CTD (nuclear envelope phosphatase 1 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMA8_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 3.740e-20
Identity = 77/222 (34.68%), Postives = 115/222 (51.80%), Query Frame = 1
Query:  865 LLLLDLDETLVHCSPHLMQPPRRHGGXXXXXXXXAPRPDLKLEMRGRAPSDNRPSCMNAWKRPHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLID-SRCVIGKRFYRDSCVRRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFPLRTVLVDNQPRT-VVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQDVRSVLGLR 1524
            +L+LDLDETLVH S                    +   DL +E+      D+ P+     KRPHL++F+ VV +WY++ +FT+  + +A+PLID +D +  +   R++RD CVR                  +P            P   VK+L VV S H   + ++VDN P +  +  AN LP+ +W+  D  D +LL+LLPVL +L+  +DVRSVLGLR
Sbjct:  378 ILILDLDETLVHSS-----------------FKDSTGCDLTVEVD----VDDVPTVFFVRKRPHLELFIRVVRQWYDLVIFTASLRRYADPLIDALDPTGSLFCARYFRDDCVR------------------LP------------PFNFVKNLSVV-SPHLG-KVIIVDNSPASYAMHAANALPIDAWYD-DPFDEELLNLLPVLRSLSVLEDVRSVLGLR 545          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig766.15831.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
FCP14.130e-27790.12homology domain-containing protein n=1 Tax=Ectocar... [more]
FCP18.610e-26288.13homology domain-containing protein n=1 Tax=Ectocar... [more]
Hypothetical3.240e-2536.32protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID... [more]
Hypothetical7.800e-2332.95protein n=1 Tax=Lotharella globosa TaxID=91324 Rep... [more]
Phosphatase3.040e-2233.48isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=1300... [more]
FCP11.150e-2133.63homology domain-containing protein n=1 Tax=Coemans... [more]
Hypothetical2.550e-2033.64protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Similar2.870e-2032.88to nuclear LIM interactor-interacting factor n=2 T... [more]
Hypothetical3.360e-2032.14protein n=1 Tax=Didymodactylos carnosus TaxID=1234... [more]
CTD3.740e-2034.68nuclear envelope phosphatase 1 n=1 Tax=Cyanidiococ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig766contigE_fasciculatus_S2_contig766:25473..27440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score776.2
Seed ortholog evalue9.9e-222
Seed eggNOG ortholog2880.D7FPY9
Model size1578
KEGG koko:K15731
Hectar predicted targeting categorychloroplast
Exons2
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG5190@1,KOG1605@2759
Ec32 ortholog descriptionNLI interacting factor
Ec32 orthologEc-01_008140.1
EC3.1.3.16
Cds size1578
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842428.5905569-CDS-E_fasciculatus_S2_contig766:25472..266061696842428.5905569-CDS-E_fasciculatus_S2_contig766:25472..26606Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig766 25473..26606 +
1696842428.6071482-CDS-E_fasciculatus_S2_contig766:26996..274401696842428.6071482-CDS-E_fasciculatus_S2_contig766:26996..27440Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig766 26997..27440 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig766.15831.1prot_E_fasciculatus_S2_contig766.15831.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig766 25473..27440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig766.15831.1

>prot_E_fasciculatus_S2_contig766.15831.1 ID=prot_E_fasciculatus_S2_contig766.15831.1|Name=mRNA_E_fasciculatus_S2_contig766.15831.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=526bp
MGGSSRDYGGMIGPVSPLSQALHIALAFVVLVLVAIAKADDVTAVRATPY
AKGAGYSGSGSNSGSSGAPGSTPARRKGSRTGGSVDSSQRSSGSGPVKRR
RIASSSSGKEKSGRRRAGGVLSSPVVRRLRAAWSSLWHAVEDDLATRWRA
AGRVLTRLRQAWSALWVPPPHAEADILAGALASPPRYPHGATDRRRRTAA
GGSGGGGGGSGVGSVGGGSGGSERRRRRSGGRTSGSRGGRGALGGTDGSS
PSEKGLHLGRPVGLNCLNFLSLCGYRPGGGRGSRQPKFLLLLDLDETLVH
CSPHLMQPPRRHGGGGGGRGRGAPRPDLKLEMRGRAPSDNRPSCMNAWKR
PHLDVFLGVVSRWYEVAVFTSGRQCFAEPLIDLIDSRCVIGKRFYRDSCV
RRDGAASPGTGRTARGATGVPTATAAEAGAPPRPSESVKDLQVVGSEHFP
LRTVLVDNQPRTVVQQANVLPVKSWFPTDMEDRQLLDLLPVLLALTSCQD
VRSVLGLRPGVGVGGGAGAAAACSG*
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mRNA from alignment at E_fasciculatus_S2_contig766:25473..27440+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig766.15831.1 ID=mRNA_E_fasciculatus_S2_contig766.15831.1|Name=mRNA_E_fasciculatus_S2_contig766.15831.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1968bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig766:25473..27440+ (Ectocarpus fasciculatus EfasUO2)
ATGGGCGGCAGCAGCCGGGACTATGGCGGGATGATCGGCCCGGTGTCCCC CCTCTCGCAGGCTCTCCACATCGCTCTGGCGTTCGTCGTGCTGGTGCTCG TGGCGATCGCGAAGGCCGACGACGTCACCGCGGTGCGCGCCACGCCGTAC GCCAAGGGCGCGGGGTACAGCGGCAGCGGCAGCAACAGCGGCAGCTCCGG AGCCCCAGGCTCCACGCCGGCGCGAAGGAAAGGGTCCAGGACCGGCGGCA GCGTGGACTCTTCCCAACGGAGCTCTGGATCGGGGCCGGTGAAGCGAAGA AGAATCGCCAGCAGCAGCAGTGGCAAGGAAAAAAGCGGGCGCCGCCGTGC GGGCGGGGTGTTGTCGTCGCCGGTCGTGCGCCGCCTCCGGGCGGCGTGGT CCTCGCTCTGGCACGCCGTCGAGGACGACCTGGCCACCCGGTGGCGCGCC GCGGGCCGGGTTCTCACGCGCCTCCGCCAGGCGTGGTCGGCCCTCTGGGT GCCCCCGCCGCACGCCGAGGCGGACATCCTAGCCGGCGCCCTGGCGTCGC CGCCGCGCTACCCCCACGGAGCCACGGATCGTCGGCGCAGGACAGCCGCG GGTGGGAGTGGCGGCGGCGGGGGCGGGAGCGGCGTCGGGAGCGTCGGCGG TGGCAGCGGCGGTTCCGAGAGGCGCCGGCGAAGATCCGGGGGGCGCACGA GCGGCAGCCGCGGCGGCCGGGGCGCGCTCGGCGGGACAGACGGCAGCAGC CCGAGCGAGAAGGGCCTGCACCTCGGGCGTCCCGTGGGCCTGAACTGCCT GAACTTTCTGAGCCTGTGCGGGTACCGCCCCGGCGGGGGCAGGGGCTCGC GGCAGCCCAAGTTCCTGCTCCTGCTCGACCTCGACGAGACCCTGGTCCAC TGCTCTCCGCACCTGATGCAGCCGCCGAGGAGGCACGGCGGCGGCGGCGG GGGACGCGGGCGGGGGGCGCCGCGGCCGGACCTGAAGCTCGAGATGAGGG GTAGAGCGCCCTCGGACAACCGGCCGTCGTGCATGAACGCGTGGAAGCGG CCGCACCTGGACGTCTTCCTCGGGGTAGTTAGCAGGTGGTACGAGGTCGC CGTGTTCACGTCGGGGCGACAGTGCTTTGCGGAGGTGAGAATCGGGGTTT CAACGAGAAGCCTTTTTTTCTTTTTTTTTTGCCGTGATTGTTTTTGGTGC CAAGGTGTGCGTCATCAGGGTTGCTGTCGTTGGACCCGCTCGCTCGGGGG GAGGACACTGTACCGGGGAGGAGCAGCACCAAGGTCGATGAATTTTTTTG TCTGTCGATGCTGTAGTTGCACAGCAATCGCACCATCAACGTCGAAAACA GGGAGTAATCTCAAATTCACCTCTCTCTCTCCCAAATCTTCGTCCTTTTC CCGCGTGTGTCGATATATATCGTTATGTCTACAACCGTTTCACCGATCGA TCACTCTCCTCACGCCTGTGTGCACCCCCGCCCCCCCGCTCTTGTGCTCT TTGTTGTTCTCCCCTTGCCTTCAGCCGCTCATCGACCTCATCGACTCGCG GTGTGTTATCGGCAAGCGTTTCTACCGAGACAGCTGCGTCCGCCGCGACG GGGCCGCCTCTCCCGGCACGGGACGGACGGCGCGTGGCGCTACCGGTGTG CCTACGGCGACGGCGGCGGAGGCGGGGGCTCCACCCAGACCCTCGGAGAG CGTTAAGGATCTCCAGGTGGTGGGCTCGGAGCACTTCCCGCTCCGCACCG TGCTCGTGGACAACCAGCCGCGGACGGTGGTGCAGCAGGCCAACGTTCTC CCCGTCAAGTCGTGGTTTCCGACGGACATGGAGGACCGGCAGCTGCTGGA CCTCCTCCCGGTGCTGCTGGCGCTGACGTCGTGCCAGGACGTGCGCTCGG TGCTGGGCTTGAGGCCGGGGGTCGGGGTTGGGGGCGGCGCCGGGGCGGCG GCGGCGTGCTCCGGGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig766:25473..27440+

>mRNA_E_fasciculatus_S2_contig766.15831.1 ID=mRNA_E_fasciculatus_S2_contig766.15831.1|Name=mRNA_E_fasciculatus_S2_contig766.15831.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1578bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig766:25473..27440+ (Ectocarpus fasciculatus EfasUO2)
ATGGGCGGCAGCAGCCGGGACTATGGCGGGATGATCGGCCCGGTGTCCCC
CCTCTCGCAGGCTCTCCACATCGCTCTGGCGTTCGTCGTGCTGGTGCTCG
TGGCGATCGCGAAGGCCGACGACGTCACCGCGGTGCGCGCCACGCCGTAC
GCCAAGGGCGCGGGGTACAGCGGCAGCGGCAGCAACAGCGGCAGCTCCGG
AGCCCCAGGCTCCACGCCGGCGCGAAGGAAAGGGTCCAGGACCGGCGGCA
GCGTGGACTCTTCCCAACGGAGCTCTGGATCGGGGCCGGTGAAGCGAAGA
AGAATCGCCAGCAGCAGCAGTGGCAAGGAAAAAAGCGGGCGCCGCCGTGC
GGGCGGGGTGTTGTCGTCGCCGGTCGTGCGCCGCCTCCGGGCGGCGTGGT
CCTCGCTCTGGCACGCCGTCGAGGACGACCTGGCCACCCGGTGGCGCGCC
GCGGGCCGGGTTCTCACGCGCCTCCGCCAGGCGTGGTCGGCCCTCTGGGT
GCCCCCGCCGCACGCCGAGGCGGACATCCTAGCCGGCGCCCTGGCGTCGC
CGCCGCGCTACCCCCACGGAGCCACGGATCGTCGGCGCAGGACAGCCGCG
GGTGGGAGTGGCGGCGGCGGGGGCGGGAGCGGCGTCGGGAGCGTCGGCGG
TGGCAGCGGCGGTTCCGAGAGGCGCCGGCGAAGATCCGGGGGGCGCACGA
GCGGCAGCCGCGGCGGCCGGGGCGCGCTCGGCGGGACAGACGGCAGCAGC
CCGAGCGAGAAGGGCCTGCACCTCGGGCGTCCCGTGGGCCTGAACTGCCT
GAACTTTCTGAGCCTGTGCGGGTACCGCCCCGGCGGGGGCAGGGGCTCGC
GGCAGCCCAAGTTCCTGCTCCTGCTCGACCTCGACGAGACCCTGGTCCAC
TGCTCTCCGCACCTGATGCAGCCGCCGAGGAGGCACGGCGGCGGCGGCGG
GGGACGCGGGCGGGGGGCGCCGCGGCCGGACCTGAAGCTCGAGATGAGGG
GTAGAGCGCCCTCGGACAACCGGCCGTCGTGCATGAACGCGTGGAAGCGG
CCGCACCTGGACGTCTTCCTCGGGGTAGTTAGCAGGTGGTACGAGGTCGC
CGTGTTCACGTCGGGGCGACAGTGCTTTGCGGAGCCGCTCATCGACCTCA
TCGACTCGCGGTGTGTTATCGGCAAGCGTTTCTACCGAGACAGCTGCGTC
CGCCGCGACGGGGCCGCCTCTCCCGGCACGGGACGGACGGCGCGTGGCGC
TACCGGTGTGCCTACGGCGACGGCGGCGGAGGCGGGGGCTCCACCCAGAC
CCTCGGAGAGCGTTAAGGATCTCCAGGTGGTGGGCTCGGAGCACTTCCCG
CTCCGCACCGTGCTCGTGGACAACCAGCCGCGGACGGTGGTGCAGCAGGC
CAACGTTCTCCCCGTCAAGTCGTGGTTTCCGACGGACATGGAGGACCGGC
AGCTGCTGGACCTCCTCCCGGTGCTGCTGGCGCTGACGTCGTGCCAGGAC
GTGCGCTCGGTGCTGGGCTTGAGGCCGGGGGTCGGGGTTGGGGGCGGCGC
CGGGGCGGCGGCGGCGTGCTCCGGGTGA
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