mRNA_E_fasciculatus_S2_contig765.15815.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig765.15815.1 vs.
Match: MORN (domain repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB5_ECTSI) HSP 1 Score: 1211 bits (3133), Expect = 0.000e+0 Identity = 737/880 (83.75%), Postives = 753/880 (85.57%), Query Frame = 1
Query: 1 MSVPEGTAAIREAIEAKRSKIKTPGVSLKTLERDKSRKKAWWNEKIQIACMDNDGEPIQGCAWKVPRRLLTEVVLRTMCLTCPEHVKIEYLKDQTTGDIVWPPDAQMHCHPLPWNYAVVAVEEREARCLSSCVIDRSRDPTYYGDMQIMIFNVPLNTNNEKTEVTSEEVKAWLLCGLLEEDEDVKEAREIVRALEADAKAVEYKLSRVGYMKFTQKTGFGKTEKQLLTDEEQAAKREEENEALSAQRDKARRLGLMEEGVAEARDMLEGILKKSQDTAVHLEQGNVQKKVGTCTYYVSFPGFYGPTLEDIVCAKTDWPGIKLAAAHDDLPPWAGRGEIPDGSKSYIKRYTEHAVNMRAVQICRLPHGFGQHKARKHMARVRKQKNKVEPITEDAPGGMLTAPASPAAAATPGSPLQVDSRTPLSTRGGATPAPTSSANASLAVRPLRDTSSAPRPTTATSGNVTGVQAKEAGQGKGVEEEIPFAGKEFYFYHGEFAEGLKSGFGMEFTNADVYYGEYKKGKRNGVGALQCANGDRIEGNFVSETR--QAGSEPNPYTTGVSHGNVEINYASGGTYRGEMKHGRITGKGEFVSCLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGPGTLFRGNVKRVYDPRSGKKAIKSNRIYEGNWRGSELRTGSMVTMIKAGVTHCAGPNKCVWYNRAVDRIKRRETQTHRKTVESLDFYGRYQTLLRTEVQKKKSRLYSKQAKQANQDLINDHVKEITAEELREVFVARAINLEQIMRVTGKQLEAEPGSGAIAKASERLDRIAASKGRGANGTILSRLLLSRLEEAQELQEVV 2634
MSVPEGTAAIREAIEA+RSKIKTPG SLKTLERD SRKKAWWNEKIQIACMD DGEPIQGCAWKVPRR LTEVVLR MCLTCPEHVKIEYLKDQTTGDIVWPP AQMHCHPLPWNYAVVA+EE+E VIDRSRDPTYYGD+QIMIFNVPLNTNNEKTE AREIVR LEA+AK VE++LSRVGYMKFT+KTGFGK EKQLLTDEEQAAKREE NEALSA LEGILKK++DT VHLEQGNVQKKVG CTYYVSFPGFYGPTLEDIVCAKTDWPGIKLAAAHDDLPPWAGRGEIPDGSKSYIKRYTEHA+NMRAVQICRL HGFGQHK TPLSTRGGATPAPTS ANASLAVRPLRDTSSAPRP TAT GNVTG QAKE GQGKGVE+E+PFAGKEFYFYHGEFAEGLKSGFGMEFTNADVYYGEYKKGKRNGVGALQCANGDRIEGNFVSETR +AGSEPNPYT GVSHG VEINYASGGTYRGEMKHGRITGKGEFVSCLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGPGTLFRGNVKRVYDPRSGKKAIKSNRIYEGNWR SELRTGSMVTM KAGVTHCAGPNK VWYNRAVDRIKRRETQTHRKTVESLDFYGRYQTLLRTEVQKKKSRLYSKQ KQANQDLINDHVK+ITAEELREVFVARAINLEQIMRVTGKQLEAEPGSGAIAKASE+LDRIAASKGR ANGT LSRLLLSRLEEAQELQEVV
Sbjct: 1 MSVPEGTAAIREAIEARRSKIKTPGESLKTLERDASRKKAWWNEKIQIACMDKDGEPIQGCAWKVPRRRLTEVVLRNMCLTCPEHVKIEYLKDQTTGDIVWPPHAQMHCHPLPWNYAVVAMEEKE-------VIDRSRDPTYYGDVQIMIFNVPLNTNNEKTE-----------------------AREIVRTLEAEAKMVEHQLSRVGYMKFTKKTGFGKDEKQLLTDEEQAAKREERNEALSAX------XXXXXXXXXXXXXXLEGILKKTKDTPVHLEQGNVQKKVGNCTYYVSFPGFYGPTLEDIVCAKTDWPGIKLAAAHDDLPPWAGRGEIPDGSKSYIKRYTEHAINMRAVQICRLQHGFGQHK------------------------------------------------TPLSTRGGATPAPTSPANASLAVRPLRDTSSAPRPPTATGGNVTGGQAKEGGQGKGVEDELPFAGKEFYFYHGEFAEGLKSGFGMEFTNADVYYGEYKKGKRNGVGALQCANGDRIEGNFVSETRFPEAGSEPNPYTAGVSHGIVEINYASGGTYRGEMKHGRITGKGEFVSCLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGPGTLFRGNVKRVYDPRSGKKAIKSNRIYEGNWRASELRTGSMVTMTKAGVTHCAGPNKGVWYNRAVDRIKRRETQTHRKTVESLDFYGRYQTLLRTEVQKKKSRLYSKQVKQANQDLINDHVKKITAEELREVFVARAINLEQIMRVTGKQLEAEPGSGAIAKASEKLDRIAASKGRSANGTTLSRLLLSRLEEAQELQEVV 796
BLAST of mRNA_E_fasciculatus_S2_contig765.15815.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDM4_9STRA) HSP 1 Score: 300 bits (767), Expect = 9.290e-86 Identity = 306/816 (37.50%), Postives = 408/816 (50.00%), Query Frame = 1
Query: 1 MSVPEGTAAIREAIEAKRSKIKTPGVSLKTLERDKSRKKAWWNEKIQIACMDNDGEPIQGCAWKVPRRLLTEVVLRTMCLTCPEHVKIEYLKDQTTGDIVWPPDAQMHCHPLPWNYAVVAVEEREARCLSSCVIDRSRDPTYYGDMQIMIFNVPLNTNNEKTEVTSEEVKAWLLCGLLEEDEDVKEAREIVRALEADAKAVEYKLSRVGYMKFTQKTGFGKTEKQLLTDEEQAAKREE-------ENEALSAQRDKARRLGLMEEGVAEARDMLEGILKKSQDTAVHLEQGNVQKKVGTCTYYVSFPGFYGPTLEDIVCAKTDWPGIKLAAAHDDLPPWAGRGEIPDGSKSYIKRYTEHAVNMRAVQICRLPHGFGQHKARKHMARVRKQKNKVEPITEDAPGGMLTAPASPAAAATPGSPLQVDSRTPLSTRGGATPAPTSSANASLAVRPLRDTSSAPRPTTATSGNVTGVQAKEAGQGKGVEEEIPFAGKEFYFYHGEFAEGLKSGFGMEFTNADVYYGEYKKGKRNGVGALQCANGDRIEGNFVSETRQAGSEPNPYTTGVSHGNVEINYASGGTYRGEMKHGRITGKGEFVSCLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGPGTLFRGNVKRVYDPRSGKKAIKSNRIYEGNWRGSELRTGSMVTMIKAGVTHCAGPNKCVWYNRAVDRIKRRETQTHRKTVESLDFYGRYQTLLRTEVQKKKSRLYSKQAKQANQDLINDHVKEITAEELREV 2427
M+ G A++ A+EAKRSKI+ P +LK LER+ RKK +WN+ + I C+D +G + C+W++ RR LT ++ +C CP + I+YL+D T ++VW D Q C P PW Y V+ EER V D D Y GD +M+ PL T NE+ +ED ++ AR+++ + +A++ KL RV ++ G TE Q Q A RE E E L+A KA R EE A D+L I + + T L + + TCTY ++ G GP LED + AK +WPGIKLA AH + P WAGRG +PDGSK+Y+ YT H NMR +CRL HGFGQH+A + + RV + GGA T + G+ E +PF G F FY G+F EG ++G G+ + +G ++ G G ++G R+ G++ + R NPY GV G I + G Y GE+ GR++G+G + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G L RGNVK VYD +G + +NR+YEG +RG L G VT+ + HC + + R R RRE + +K R+ KQ ++A D++ D+ + +T E +R V
Sbjct: 1 MATAAGQASLLAAVEAKRSKIEVPPPTLKKLEREAERKKEFWNQNVIIKCVDANGIAVPNCSWRLQRRKLTPDFIKLLCQRCPLAINIDYLRDAATAEVVWLEDMQAVCKPAPWAYTVIPKEERR-------VADDRADAHYVGDTHLMLLQAPLRTENEE----------------FDEDVEISGARDLIAQMTQQMEALDKKLGRVAAVQH------GHTEAQ------QEAAREAMYATIVMEKEILAASL-KASRAYFCEE----AADVLASITEARRATPFALRRSAIDAARATCTYLITVGGAAGPALEDALVAKRNWPGIKLAVAHAENPAWAGRGTVPDGSKAYLPCYTRHGANMRGAALCRLAHGFGQHRAVRPLRRV------------------------------------------ATAAGGARAGNTKTXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXSGEEFLEHVPFCGARFAFYSGQFHEGTRTGAGVLYGEGGALWGAFEGGHARGACGEHRSDGTRLAGDWSAAARLPVEPSNPYAIGVLDGAARIVFPDGAVYEGEVSAGRVSGEGTYCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLRRGNVKTVYDAHTGGQRPMANRVYEGTFRGGGLEGGGAVTVHRTRRMHCVAAREGDRWGRGAVRTARREAAAXXXXXXXXXXXXXXXXXXXATAEAEKRRVARKQVRRAEADIVADYHEPLTLEHVRSV 730
BLAST of mRNA_E_fasciculatus_S2_contig765.15815.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X342_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.300e-33 Identity = 105/351 (29.91%), Postives = 171/351 (48.72%), Query Frame = 1
Query: 85 KTLERDKSRKKAWWNEKIQIACMDNDGEPIQGCAWKVPRRLLTEVVLRTMCLTCPEHVKIEYLKDQTTGDIVWPPDAQMHCHPLPWNYAVVAVEEREARCLSSCVIDRSRDPTYYGDMQIMIFNVPLNTNNEKTEVTSEEVKAWLLCGLLEEDEDVKEAREIVRALEADAKAVEYKLSRVGYMKFTQKTGFGKTEKQLLTDEEQAAKREEENEALSAQRDKARRLGLMEEGVAEARDMLEGILKKSQDTAVHLEQGNVQKKVGTCTYYVSFPGFYGPTLEDIVCAKTDWPGIKLAAAH----------DDLPPWAGRGEIPDGSKSYIKRYTEHAVNMRAVQICRLPHGFG 1107
K R + K+ W NE I+ +G+ + +++PR+ E L+ + I+YL++ ++G+I++P +A C P Y V+ RE V D + Y G + +++ NVP+ + +V +E+++ WL+ G+ EED DV+ A V ++A+ + V+ + V +++ GK K D+E+A K +E +E K + L + V RD +L +++ N GT +YVSF LE+ + K DW G+KLA AH + LPPWAGRG +PDGSK Y+ Y + VNM AV + R+ HGFG
Sbjct: 23 KAARRKEVAKRKWHNELIRFEAQFPNGDTEK---FRLPRQKCDERSLQQFIFRTKQPFLIDYLQEASSGEIIYPGEALAKCRVRPAEYKVIPKPVRE-------VDDAADKEGYEGSLALVLENVPVQNDATGHDVRAEDIREWLMFGIQEEDPDVRAAVGRVEVVQAEIEEVKRAMRDVPFLEMFD--AHGKPLKDEEADDERAVKYQECSEQKEQFEKKLEQAKLHAQEVIMERDKTPIVLTSTEEDKAWTGHNN-----GTKAWYVSFQTDEAWQLEEWISGKQDWDGVKLALAHAVDSEEGNYKETLPPWAGRGMVPDGSKPYLPDYQPYVVNMAAVYVRRVEHGFG 356
BLAST of mRNA_E_fasciculatus_S2_contig765.15815.1 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZR81_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.160e-9 Identity = 77/308 (25.00%), Postives = 126/308 (40.91%), Query Frame = 1
Query: 196 PRRLLTEVVLRTMCLTCPEHVKIEYLKDQTTGDIVWPPDAQMHCHPL----PWNYAVVAVEEREARCLSSCVIDRSRDPTYYGDMQIMIFNVPLNTNNEKTEVTSEEVKAWLLCGLLEEDEDVKEAREIVRALEADAKAVEYKLSRVGYMKFTQKTGFGKTEKQLLTDEEQAAKREEENEALSAQRDKARRLGLMEEGVAEARDMLEGILKKSQDTAVHLEQGNVQKKVGTCTYYVSFPGFYGPTLEDIVCAKTDWPGIKLAAAHDDLPPWAGRGEIPDGSKSYIKRYTEHAVNMRAVQICRLPHGFG 1107
P + +T LR + Y +D G ++WP + Q+ P PW Y +V +E E +D + DP Y G I + NVP E +++ WLL GLL + + + +A+ + LE + +L VG M + +Q +T A + + E + + + R L+ E + +G + DTA+ N ++K ++Y F G L + K DW ++LAA + P E D S+ +NMR V+ICR+ HG G
Sbjct: 47 PYQRITRANLRLRVVNRLFKCNAAYARDPF-GMVLWPREWQLKMMPATMAEPWCYDIVQSDEPEP-------VDDAMDPRYEGHTVIKVSNVP-------KECMENDLRHWLLQGLLMDYDQINDAKFKLSVLEKKKDLLLDRLETVGTMAVSGNKSEQVDTRQKVTKAITAQQSDLEKQIIKTKESIKRWTRLLLSEPIELSYLKDGTEHRFVDTAIE----NDKEKY---SWYADFKSLRGQELALMAINKRDWADLRLAATRPE--PTVSLEEFDDPSRE---------INMRMVRICRVKHGLG 321 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig765.15815.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig765.15815.1 >prot_E_fasciculatus_S2_contig765.15815.1 ID=prot_E_fasciculatus_S2_contig765.15815.1|Name=mRNA_E_fasciculatus_S2_contig765.15815.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=903bp MSVPEGTAAIREAIEAKRSKIKTPGVSLKTLERDKSRKKAWWNEKIQIACback to top mRNA from alignment at E_fasciculatus_S2_contig765:15194..27912+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig765.15815.1 ID=mRNA_E_fasciculatus_S2_contig765.15815.1|Name=mRNA_E_fasciculatus_S2_contig765.15815.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=12719bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig765:15194..27912+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig765:15194..27912+ >mRNA_E_fasciculatus_S2_contig765.15815.1 ID=mRNA_E_fasciculatus_S2_contig765.15815.1|Name=mRNA_E_fasciculatus_S2_contig765.15815.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2709bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig765:15194..27912+ (Ectocarpus fasciculatus EfasUO2)back to top |