mRNA_E_fasciculatus_S2_contig764.15804.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig764.15804.1
Unique NamemRNA_E_fasciculatus_S2_contig764.15804.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC5_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 2.820e-52
Identity = 85/98 (86.73%), Postives = 92/98 (93.88%), Query Frame = 1
Query:    1 RLAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY 294
            RLAVASRSPVDEGGAARGILGALGLLDLFC LEIHTGSKA HFQNIH ATGVEYR+MLFFDDE  NIKT+R LGVTC+K+S+ESGLTFAA+NAGLK+Y
Sbjct:  144 RLAVASRSPVDEGGAARGILGALGLLDLFCCLEIHTGSKAKHFQNIHAATGVEYREMLFFDDEKHNIKTVRRLGVTCVKVSKESGLTFAAVNAGLKKY 241          
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: HAD-like (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH82_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 5.810e-52
Identity = 85/98 (86.73%), Postives = 91/98 (92.86%), Query Frame = 1
Query:    1 RLAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY 294
            RLAVASRSP+DEGGAARGILGA+GLL LFC LEIHTGSKA HFQNIH ATGVEYRDMLFFDDE  NIKT+R LGVTCIK+S+ESGLTFAA+NAGLKEY
Sbjct:  145 RLAVASRSPIDEGGAARGILGAVGLLGLFCCLEIHTGSKAKHFQNIHAATGVEYRDMLFFDDEKHNIKTVRRLGVTCIKVSKESGLTFAAVNAGLKEY 242          
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: Magnesium-dependent (phosphatase 1 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KYM7_ORNMO)

HSP 1 Score: 81.3 bits (199), Expect = 2.570e-17
Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 1
Query:    4 LAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY 294
            L VASR+  D+  AAR +LG L     F + EI+ G K  HF     ++GV Y+DMLFFDDE RNI  +  LGVTC+    E G+T A +  GLK++
Sbjct:   63 LGVASRT--DDPDAARELLGILNWNKYFTYQEIYPGCKVAHFNKFASSSGVTYKDMLFFDDEHRNIVDVSKLGVTCVYA--ERGMTKAVLEEGLKKF 155          
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: Magnesium-dependent (phosphatase 1 n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZIJ0_9CHEL)

HSP 1 Score: 80.1 bits (196), Expect = 7.090e-17
Identity = 40/97 (41.24%), Postives = 60/97 (61.86%), Query Frame = 1
Query:    4 LAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY 294
            LAVASR+   +GG  + ++   G  D F + +++ GSK  HF+  H  +G+ Y+DMLFFDDE RNI  I  LGVT + +    GL+   +N+ LK++
Sbjct:   64 LAVASRTDWPDGG--QQLIDMFGWNDFFTYKQLYPGSKCKHFEYFHQKSGIPYKDMLFFDDEYRNIVQIGKLGVTTMTVDSAEGLSERTLNSALKKF 158          
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: magnesium-dependent (phosphatase 1-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8988B)

HSP 1 Score: 79.3 bits (194), Expect = 1.550e-16
Identity = 45/97 (46.39%), Postives = 58/97 (59.79%), Query Frame = 1
Query:    4 LAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY 294
            LAV SR+    G  A  +L   G    F F EI+ G K  HF+ +H  +GVEY  MLFFDDEMRNI+ +  LGVTCI + +  G T + +  GLKE+
Sbjct:   64 LAVVSRTGEVRG--ANQLLQLYGWERFFKFKEIYPGQKTKHFERLHSKSGVEYNQMLFFDDEMRNIRDVSTLGVTCIFVQD--GTTESVVENGLKEF 156          
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: magnesium-dependent (phosphatase 1-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3D3CB)

HSP 1 Score: 79.7 bits (195), Expect = 1.990e-16
Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 1
Query:    4 LAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY 294
            + +A+ S  D+  AA+ +L AL +   F + EI+ GSK  HF+    A+G+ Y DMLFFDDE RNI  I  LGVTC+ +  E G+    +  GLK++
Sbjct:   95 ICMAAASRTDDPPAAKELLRALDIDQYFTYKEIYPGSKVSHFKKFTQASGISYADMLFFDDEERNIDDISRLGVTCVLV--EQGMKHTVLENGLKKF 189          
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: Magnesium-dependent (phosphatase, putative n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0W0X3_PEDHC)

HSP 1 Score: 78.2 bits (191), Expect = 3.640e-16
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 1
Query:    1 RLAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY 294
            +LA+ASR+   EG  A  ++        F + EI+ G K  HF   H+ +G++Y++MLFFDDE RNI  IR LGVTC+ +  E+G+  + + +GLK +
Sbjct:   64 KLAIASRTAETEG--ANQLIRLFDWDKFFSYKEIYPGCKKTHFSKFHEKSGIDYKNMLFFDDEHRNITDIRSLGVTCVWV--ENGVNKSLVQSGLKRF 157          
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: Magnesium-dependent (phosphatase 1 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8Y3X9_BLAGE)

HSP 1 Score: 77.8 bits (190), Expect = 7.000e-16
Identity = 40/94 (42.55%), Postives = 64/94 (68.09%), Query Frame = 1
Query:    4 LAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGL 285
            LA+ASR  +++   A  +L    L   F + EI+ G+K  HF+N+H  +G++Y +MLFFDD+ RNI+ I  LGVT I++ ++ G+TF+ +N+GL
Sbjct:   75 LALASR--IEDIPGAYQLLHFFDLTHYFVYKEIYPGTKTKHFENLHIKSGIDYENMLFFDDDKRNIRDISRLGVTVIQVPKD-GITFSVVNSGL 165          
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: Magnesium-dependent (phosphatase 1, putative n=5 Tax=Schistosoma TaxID=6181 RepID=A0A3Q0KJF5_SCHMA)

HSP 1 Score: 77.4 bits (189), Expect = 1.080e-15
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 1
Query:    1 RLAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY 294
            +L  ASR+       AR +L AL   DLF + EI+ GSK  HF+  H+ +G++Y DMLFFDDE RNI  I  LGV C  +  E G+T   +   LK++
Sbjct:   73 KLGCASRTSAIS--VARQLLQALNWSDLFDYTEIYPGSKTAHFKRFHELSGIDYADMLFFDDETRNIHDISKLGVQCHLV--EHGITLNLLKDALKKF 166          
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Match: Uncharacterized (protein n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X982_9FUNG)

HSP 1 Score: 77.8 bits (190), Expect = 1.460e-15
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 1
Query:   97 EIHTGSKAVHFQNIHDATGVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY 294
            EI+  SK  HF  I   TG +YRDMLFFDDE  NI+TIRGLGVTC+ + EE G+T+ AM  GL E+
Sbjct:  139 EIYPTSKLRHFAAIQAQTGADYRDMLFFDDEFDNIRTIRGLGVTCVYI-EEDGMTWRAMREGLDEW 203          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig764.15804.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.820e-5286.73protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
HAD-like5.810e-5286.73protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Magnesium-dependent2.570e-1746.39phosphatase 1 (Fragment) n=1 Tax=Ornithodoros moub... [more]
Magnesium-dependent7.090e-1741.24phosphatase 1 n=1 Tax=Nymphon striatum TaxID=42447... [more]
magnesium-dependent1.550e-1646.39phosphatase 1-like n=1 Tax=Ischnura elegans TaxID=... [more]
magnesium-dependent1.990e-1642.27phosphatase 1-like isoform X1 n=2 Tax=Acropora mil... [more]
Magnesium-dependent3.640e-1640.82phosphatase, putative n=1 Tax=Pediculus humanus su... [more]
Magnesium-dependent7.000e-1642.55phosphatase 1 n=1 Tax=Blattella germanica TaxID=69... [more]
Magnesium-dependent1.080e-1543.88phosphatase 1, putative n=5 Tax=Schistosoma TaxID=... [more]
Uncharacterized1.460e-1559.09protein n=1 Tax=Caulochytrium protostelioides TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig764contigE_fasciculatus_S2_contig764:10173..11028 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score174.9
Seed ortholog evalue1.9e-41
Seed eggNOG ortholog2880.D8LH82
Preferred nameMDP1
Model size294
KEGG koko:K17619
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003993,GO:0004721,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006040,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0030389,GO:0030946,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901135,GO:1901564
Exons2
EggNOG free text desc.fructosamine metabolic process
EggNOG OGsKOG4549@1,KOG4549@2759
EC3.1.3.48
Cds size294
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842425.7401154-CDS-E_fasciculatus_S2_contig764:10172..103041696842425.7401154-CDS-E_fasciculatus_S2_contig764:10172..10304Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 10173..10304 +
1696842425.7515535-CDS-E_fasciculatus_S2_contig764:10866..110281696842425.7515535-CDS-E_fasciculatus_S2_contig764:10866..11028Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig764 10867..11028 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig764.15804.1prot_E_fasciculatus_S2_contig764.15804.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig764 10173..11028 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig764.15804.1

>prot_E_fasciculatus_S2_contig764.15804.1 ID=prot_E_fasciculatus_S2_contig764.15804.1|Name=mRNA_E_fasciculatus_S2_contig764.15804.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=98bp
RLAVASRSPVDEGGAARGILGALGLLDLFCFLEIHTGSKAVHFQNIHDAT
GVEYRDMLFFDDEMRNIKTIRGLGVTCIKLSEESGLTFAAMNAGLKEY
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mRNA from alignment at E_fasciculatus_S2_contig764:10173..11028+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig764.15804.1 ID=mRNA_E_fasciculatus_S2_contig764.15804.1|Name=mRNA_E_fasciculatus_S2_contig764.15804.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=856bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig764:10173..11028+ (Ectocarpus fasciculatus EfasUO2)
CGCCTCGCCGTGGCAAGTCGATCACCTGTAGACGAAGGCGGAGCAGCACG AGGCATCTTGGGCGCCTTGGGGCTACTGGACCTGTTCTGCTTCCTCGAAA TTCACACAGGAAGCAAGGCAGTGCATTTCCAGGTACGTGCTTGGTATAGG CACCTGCCTGACCTTCGCCTCGAGCTGAATTGTCGCCTCTCCTACTTCAA CTACTTTTCGTACTGACGGTTCACGGAATTTCATTGGTTGGGAGTGTAAC ATATTGGAGGTGCTGCACCTCGACATTGTTTTTCTCTTTGTGTTTGAGAC ACACCATTGTGTACCAACAATATTATCTCCCAGTGCGAAGCACCGTTGAT GATCGTGACTCATGACCGAGACGAAAACATTTTGACCTACAATACCTCCG GTTTCGGAACGCCAACCCCGGGGTATGCACTACTTTTCAAACTTAAACTT GTGTATTTGTTAACCGCGTTGTTCCTCCTCCGCAGATGAAAGGCCACACA TTTGTTCGATCCCTTTGGCGTGTAGTTGCTCGAGCTAAAGTGTTGCACAT GGAAACACAAGGTTTCAAATAGAACCCACGCAACGAGGGTAAAGTTGAGA AATTTATCTTGTGCATTTGTTGGTGTTGGGGCCTCACAACTCGGCACCAC TTTGTGCTTGCAACCATACCCATTTGTATTCCACCGCCGTTCAGAACATT CACGATGCTACGGGTGTCGAATACCGAGACATGCTCTTCTTCGACGACGA AATGCGCAACATCAAGACCATCAGAGGGCTTGGCGTGACCTGCATCAAAC TTAGCGAGGAGTCTGGCCTAACCTTCGCCGCCATGAACGCGGGTTTGAAG GAGTAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig764:10173..11028+

>mRNA_E_fasciculatus_S2_contig764.15804.1 ID=mRNA_E_fasciculatus_S2_contig764.15804.1|Name=mRNA_E_fasciculatus_S2_contig764.15804.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=294bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig764:10173..11028+ (Ectocarpus fasciculatus EfasUO2)
CGCCTCGCCGTGGCAAGTCGATCACCTGTAGACGAAGGCGGAGCAGCACG
AGGCATCTTGGGCGCCTTGGGGCTACTGGACCTGTTCTGCTTCCTCGAAA
TTCACACAGGAAGCAAGGCAGTGCATTTCCAGAACATTCACGATGCTACG
GGTGTCGAATACCGAGACATGCTCTTCTTCGACGACGAAATGCGCAACAT
CAAGACCATCAGAGGGCTTGGCGTGACCTGCATCAAACTTAGCGAGGAGT
CTGGCCTAACCTTCGCCGCCATGAACGCGGGTTTGAAGGAGTAC
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