mRNA_E_fasciculatus_S2_contig7639.15802.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7639.15802.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGA7_ECTSI) HSP 1 Score: 887 bits (2293), Expect = 5.220e-307 Identity = 545/835 (65.27%), Postives = 593/835 (71.02%), Query Frame = 1
Query: 4 QEHKCACSTTKNNDCRTRSTAGRYRDLGGAAAGSTPDGCTGASGAWGNPRAHATGGAYILRPEISAPTSQSATPYMDPASLTRPPSLQRAPYLSLDGAEEPIEDLAFXXXXXXXXXXGNGSIDGNGSAATAATADMKGIPDLSVWNDYDLGRSGGDSSAVCLGSGXXXXXXXXATAGDNALATHEGDTCGILDDEDDEAALAMAADLLLGY--ASTAPA---------PGPAPGSTPRPSRXXXXXSLPPPPGFSRAAAMDTCQPWLGDLASAAGGSG--AGCSFFGEPYMNPSVGGRHRRRSKSRLRFCSPEEGMGDDPVSRDDEDVTPFGLLAAVNRQTTERVPAGGAEIGEVGAAVAAETAASVAGGGKGAPSGDSSARNGGSSLYGRNERNLVPRPAPQPTFRTAENSRLSGYARVALVDQDYRAGSGGINSSLSHEVASPEGGNDTSAGNDDLADGRVPSGDGRSVCGDEGRGRSGGGSRVRGNEGDIARELQGSGDRGGGGGRDKPIAEGQRRCGVYPSARAYLPIVSYGGGEERPVGLAGGEMGRAGVAPAEGVRSIHKSDDSEDGXXSNDRHRAGAVAAEASHGGRSIGVAPSLPARSAVLSQPGGDVAGAAREAEGSAAEIEDGRRMLHDALFH---------VGGAVVAEENGQRVVGGGGLAIEGNQGGSAEGLGIPVVVDDDVRAGAGVGXXXXXXXXXXXXXXXXXASGEAMPTTPLAPSAKSWFGGATVSCAVGLLRRWAQRTAVAVATTTSTPERTPPESSCSPAAFTADGKPSSAATSGGKGLGSGWRRHPGTIPYREDVSYSIEEWGLPGSRGEYSRA 2442
QEHKCACSTT+++D RTRST+GR+RD GG AGSTP TGA+GA GNPRAHATGGAYILRP+I APTSQSATPYM+PASL RPPSLQRAPYLSLDGA+EP+ DLAF G+G DGNGSAAT ATAD+ G P LSVWNDY LG SGGDSSAV G XXXXXXA AG N L +HE DT GILDDEDDEAAL +AAD LLGY +T PA GP P STPRPSR SL PP GFS A M T Q WLG +ASAA G G AGC+FFGE MNP+V G HRRRS SRLRFCSP+EGMGD PVS DDEDVTP GLLAAV+ + TER PA GAEIG+VG+ AET A+ GGKG S +S RN GSSL G N+R L PRP+PQPTFRTAENSRL Y R ++VDQDYRAG GG N LS EVASP N TS G DDLA+ V GDG VCGDEGRGR IA+EL GSGD GGG GR P+A GQRR G+YP A AY P VS G G+ER GLAGGEMGRAGVAPA D++D S+DRHRA AVAA A H G I VAPSLP RSA +SQP +AG AR AEGSA + GRR+LHDAL VGGAVV + QRVVGG GLAIEGNQGGSAEGLGIP VD DVRAG GV XX A+ EAMPT PLAPS KSWFG A SCA+GLLRRWAQRT++AVATTTST ERT PES SPAAFTA GKPS AA SGG LG+GWRRHPG IPYREDVS SIEE GLPGSRGE + A
Sbjct: 447 QEHKCACSTTEDSDRRTRSTSGRFRDRGGVTAGSTPGVPTGANGARGNPRAHATGGAYILRPDIPAPTSQSATPYMEPASLVRPPSLQRAPYLSLDGADEPVGDLAFDLSFDFPVAYGDGISDGNGSAATVATADIGGAPGLSVWNDYGLGLSGGDSSAV----GRGXXXXXXAKAGINDLLSHEDDTYGILDDEDDEAALTLAADRLLGYDDPTTCPAGPSTAASTGAGPGPXSTPRPSRGPFPSSLRPPRGFSHPATMHTRQSWLGAVASAATGDGGAAGCTFFGESSMNPAVRGYHRRRSTSRLRFCSPDEGMGDGPVSCDDEDVTPSGLLAAVDPRGTERFPADGAEIGQVGSVTEAETVAAAVEGGKGTTSCES--RNAGSSLCGLNQRILAPRPSPQPTFRTAENSRLFKYTRTSMVDQDYRAGDGGNNPGLSREVASPGEDNGTSPGKDDLANCPVLPGDGGRVCGDEGRGRGXXXXXXXXXXXGIAQELLGSGDSGGGIGRVDPVARGQRRFGIYPPAAAYPPFVSNGEGDERAAGLAGGEMGRAGVAPA----------DNDDSDGSDDRHRADAVAAGALHRGEGISVAPSLPVRSAFISQPADGIAGTARAAEGSAVGVGGGRRILHDALLRGSASSGLLDVGGAVVGGGDDQRVVGGSGLAIEGNQGGSAEGLGIPAAVDGDVRAGGGVDGXXVVAVGGEDRDEYGGAAAEAMPTAPLAPSFKSWFGVAAASCAMGLLRRWAQRTSMAVATTTSTSERTLPESLYSPAAFTAGGKPSLAAISGGTRLGAGWRRHPGAIPYREDVSCSIEECGLPGSRGEAAHA 1265
BLAST of mRNA_E_fasciculatus_S2_contig7639.15802.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q9_9PHAE) HSP 1 Score: 829 bits (2141), Expect = 7.570e-283 Identity = 548/902 (60.75%), Postives = 606/902 (67.18%), Query Frame = 1
Query: 7 EHKCACSTTKNNDCRTRSTAGRYRDLGGAAAGSTPDGCTGASGAWGNPRAHATGGAYILRPEISAPTSQSATPYMDPA------------------------------SLTRPPSLQRAPYLSLDGAEEPIEDLAFXXXXXXXXXXGNGSIDGNGSAATAATADMKGIPDLSVWNDYDLGRSGGDSSAVCLGSGXXXXXXXXATAGDNALATHEGDTCGILDDEDDEAALAMAADLLLGY--ASTAPAPGPAPGSTPRP----------SRXXXXXSLPPPPGFSRAAAMDTCQPWLGDLASAA--GGSGAGCSFFGEPYMNPSVGGRHRRRSKSRLRFCSPEEGMGDDPVSRDDEDVTPFGLLAAVNRQTTERVPAGGAEIGEVGAAVAAETAASVAGGGKGAPSGDSSARNGGSSLYGRNERNLVPRPAPQPTFRTAENSRLSGYARVALVDQDYRAGSGGINSSLSHEVASPEGGNDTSAGNDDLADGRVPSGDGRSVCGDEGRGRSGGGSRVRGNEGDIARELQGSGDRGGGGGRDKPIAEGQRRCG---------------------------------VYPSARAYLPIVSYGGGEERPVGLAGGEMGRAGVAPAEGVRSIHKSDDSEDGXXSN------------DRHRAGAVAAEASHGGRSIGVAPSLPARSAVLSQPGGDVAGAAREAEGSAAEIEDGRRMLHDALFH---------VGGAVVAEENGQRVVGGGGLAIEGNQGGSAEGLGIPVVVDDDVRAGAGVGXXXXXXXXXXXXXXXXXASGEAMPTTPLAPSAKSWFGGATVSCAVGLLRRWAQRTAVAVATTTSTPERTPPESSCSPAAFTADGKPSSAATSGGKGLGSGWRRHPGTIPYREDVSYSIEEWGLPG 2418
EHKCACSTT++++ RTRST+GR+RDLGG AGSTP TGA+GAW NPRAHATGG YILRP+I AP SQSATPYM+P+ L RPPSLQRAPYLSLDGA+EP+ DLAF XXXXXXXXXG+G DG GSAATAATADM+G P LSVWNDY L SGGD SAV G GXXXXXXXX+ ALA+HE DT GILDDEDDEAALA+AAD LLGY +T PA GP+ ++ P S SLPPPPGFS + T QPW G + SA GG AGC+FFGE MNP+V +RRRS SRLRFCSP+EG GD PVSRD DVTP GLLAAV+R TE PA G EIG+VGA AET A+ GGKG SG+S RNGGSS+Y N+RN+ PRPAP P FRT ENSRL Y R ++VDQ+YRAG GG N +SHEVASP GNDTS DDLAD V SGDG SVCGDE RGR G I +EL GSGD GGG GR P+A GQR+ G +YP A AY P VS G GEE GLAGGEMG GVAPAE VR+I SDD++D XX DRHRA AVAA A H G+ I +APS+PARSA +SQPG VAG AR AEGSA + GRRMLHDAL VGG VVA E+GQR+VGG GLAI GNQGGSA+GLGIP VD DVRAG GV XXXXXXXXXX XXX + EAMPTTPLAPS+KSWFGGA SCA+GLLRRW QRTAVAVAT E TPPESS SPAAFTA GKPS AA SGG LG+GWRRHPG IPYREDVS SIEEWG+ G
Sbjct: 464 EHKCACSTTEDSNRRTRSTSGRFRDLGGVTAGSTPGVPTGANGAWSNPRAHATGGTYILRPDIPAPASQSATPYMEPSPTNLTNPVKVVISHPPPTPLSPPRLLFVLSQLVRPPSLQRAPYLSLDGADEPVGDLAFDXXXXXXXXXGDGISDGTGSAATAATADMRGAPGLSVWNDYGLRLSGGDYSAV--GRGXXXXXXXXSNI---ALASHEDDTYGILDDEDDEAALALAADRLLGYDDRTTHPA-GPSAAASTGPXXXXXXXXXXSHGPFRSSLPPPPGFSHSVTTHTRQPWFGAVTSATTGGGRAAGCTFFGESSMNPAVRSHYRRRSNSRLRFCSPDEGTGDGPVSRDGGDVTPSGLLAAVDRHATESFPADGVEIGQVGAVTKAETVAAAVEGGKGMTSGES--RNGGSSIYDPNQRNIAPRPAPHPAFRTTENSRLFDYTRTSMVDQEYRAGDGGNNPGISHEVASPREGNDTSPAKDDLADCPVLSGDGGSVCGDEARGRGGXXXXXXXXXXGIVQELLGSGDSGGGIGRVDPVARGQRKFGASSRQSTFSFKFPCPRSYGSTRMLTNQNAGRNQIYPPAAAYSPFVSNGEGEESAAGLAGGEMG--GVAPAESVRNIQASDDNDDXXXXXXXXXXXXXXXXXDRHRADAVAAGALHRGKGISIAPSIPARSAFISQPGDGVAGTARAAEGSAVGVGGGRRMLHDALLRGSTSSGLLDVGGVVVAGEDGQRIVGGSGLAIGGNQGGSADGLGIPAAVDGDVRAGGGVDXXXXXXXXXXDRNEXXXXAAEAMPTTPLAPSSKSWFGGAAASCAMGLLRRWVQRTAVAVATXXXXSEPTPPESSYSPAAFTAGGKPSLAAISGGTRLGAGWRRHPGFIPYREDVSCSIEEWGVRG 1355 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7639.15802.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7639.15802.1 >prot_E_fasciculatus_S2_contig7639.15802.1 ID=prot_E_fasciculatus_S2_contig7639.15802.1|Name=mRNA_E_fasciculatus_S2_contig7639.15802.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=814bp QQEHKCACSTTKNNDCRTRSTAGRYRDLGGAAAGSTPDGCTGASGAWGNPback to top mRNA from alignment at E_fasciculatus_S2_contig7639:3344..7191- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7639.15802.1 ID=mRNA_E_fasciculatus_S2_contig7639.15802.1|Name=mRNA_E_fasciculatus_S2_contig7639.15802.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3848bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7639:3344..7191- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7639:3344..7191- >mRNA_E_fasciculatus_S2_contig7639.15802.1 ID=mRNA_E_fasciculatus_S2_contig7639.15802.1|Name=mRNA_E_fasciculatus_S2_contig7639.15802.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2442bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7639:3344..7191- (Ectocarpus fasciculatus EfasUO2)back to top |